ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf20l20 |
|---|---|
| Clone Library Name | barley_pub |
>Q9D6N5:DRAP1_MOUSE Dr1-associated corepressor - Mus musculus (Mouse)| Length = 205 Score = 111 bits (277), Expect = 6e-24 Identities = 74/207 (35%), Positives = 103/207 (49%), Gaps = 1/207 (0%) Frame = +1 Query: 136 RKKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKT 315 +KK RFP ARIKKIMQ DE++GK+A AVPV++SRALELFL+ L+ ++ ++T AKT Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64 Query: 316 LNSFHLKQCVKRYSSFDFLTEIVNKVPDL-GGGESCGDERGLPRRRKFSNGSDPENEEPR 492 + + HLKQC++ FDFL ++V VPD+ G GE + RR GS Sbjct: 65 MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRKPGSSGRKNGGT 124 Query: 493 SSKMPIRNLNTSPXXXXXXXXXXXXXPPTKRKEIGYVQFEDESSMFAEQSEPLPGDEIVP 672 SK + L+ + + EDES + G+E P Sbjct: 125 GSKGKDKKLSGTDS-----------------------EQEDES-----EDTDTDGEEETP 156 Query: 673 ETNRGNESIPQSSHPVAEAPSAATPAV 753 + PQ+SHP A S TP + Sbjct: 157 QLP------PQASHPPAHFQSPPTPFI 177
>Q14919:DRAP1_HUMAN Dr1-associated corepressor - Homo sapiens (Human)| Length = 205 Score = 110 bits (275), Expect = 1e-23 Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 3/113 (2%) Frame = +1 Query: 136 RKKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKT 315 +KK RFP ARIKKIMQ DE++GK+A AVPV++SRALELFL+ L+ ++ ++T AKT Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64 Query: 316 LNSFHLKQCVKRYSSFDFLTEIVNKVPDL-GGGES--CGDERGLPRRRKFSNG 465 + + HLKQC++ FDFL ++V VPD+ G GE ++G R RK +G Sbjct: 65 MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKPGSG 117
>Q10315:DPB3_SCHPO DNA polymerase epsilon subunit C - Schizosaccharomyces pombe| (Fission yeast) Length = 199 Score = 93.6 bits (231), Expect = 1e-18 Identities = 55/122 (45%), Positives = 71/122 (58%) Frame = +1 Query: 151 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFH 330 +RFP ARIKKIMQAD+DVGK+A PV++S+ALELF+Q +I S K T AK + H Sbjct: 22 SRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSH 81 Query: 331 LKQCVKRYSSFDFLTEIVNKVPDLGGGESCGDERGLPRRRKFSNGSDPENEEPRSSKMPI 510 LK V+ FDFL +IV KVPD ER R R ++ E+ E +K Sbjct: 82 LKHAVQSVEQFDFLQDIVEKVPD---APPIKAERKTKRPRARRAANEGEHNESVPAKKVK 138 Query: 511 RN 516 +N Sbjct: 139 KN 140
>Q6C6M5:DPB3_YARLI DNA polymerase epsilon subunit C - Yarrowia lipolytica (Candida| lipolytica) Length = 114 Score = 87.0 bits (214), Expect = 1e-16 Identities = 45/105 (42%), Positives = 66/105 (62%) Frame = +1 Query: 139 KKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTL 318 +++ TRFP ARIKK+MQ+D+D+GK+A A P V++ALELF+ LI+ + +K + Sbjct: 6 REIKTRFPVARIKKLMQSDDDIGKVAQATPTAVAKALELFMISLIEETCNQARMRNSKRV 65 Query: 319 NSFHLKQCVKRYSSFDFLTEIVNKVPDLGGGESCGDERGLPRRRK 453 + HLKQ V FDFL +IV+K PD + +E+ R RK Sbjct: 66 SPSHLKQAVLETEQFDFLQDIVSKHPDAVAPATGEEEQPKRRGRK 110
>P40096:NCB1_YEAST Negative cofactor 2 complex subunit alpha - Saccharomyces| cerevisiae (Baker's yeast) Length = 142 Score = 68.9 bits (167), Expect = 3e-11 Identities = 32/79 (40%), Positives = 50/79 (63%) Frame = +1 Query: 142 KLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLN 321 ++ T FP A++KKIMQ DED+GK++ A PV+ R+LE F+ L+ +S ++ G K + Sbjct: 48 RIKTHFPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQGTKRIT 107 Query: 322 SFHLKQCVKRYSSFDFLTE 378 + LK+ + FDFL E Sbjct: 108 AEILKKTILNDEKFDFLRE 126
>Q8L4B2:NFYC9_ARATH Nuclear transcription factor Y subunit C-9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 231 Score = 62.8 bits (151), Expect = 2e-09 Identities = 34/75 (45%), Positives = 47/75 (62%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ADEDV I+ PV+ +RA E+F+ +L RS+ T ++ +TL + Sbjct: 82 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141 Query: 340 CVKRYSSFDFLTEIV 384 V R FDFL +IV Sbjct: 142 AVTRTDIFDFLVDIV 156
>Q9ZVL3:NFYC3_ARATH Nuclear transcription factor Y subunit C-3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 217 Score = 62.8 bits (151), Expect = 2e-09 Identities = 34/75 (45%), Positives = 47/75 (62%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ADEDV I+ PV+ +RA E+F+ +L RS+ T ++ +TL + Sbjct: 72 PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 131 Query: 340 CVKRYSSFDFLTEIV 384 V R FDFL +IV Sbjct: 132 AVTRTDIFDFLVDIV 146
>Q9SMP0:NFYC1_ARATH Nuclear transcription factor Y subunit C-1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 234 Score = 62.4 bits (150), Expect = 3e-09 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 6/92 (6%) Frame = +1 Query: 154 RFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHL 333 + P ARIKKIM+ADEDV I+ P+L ++A ELF+ +L RS+ ++ +TL + Sbjct: 65 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124 Query: 334 KQCVKRYSSFDFLTEIV--NKVPD----LGGG 411 + R FDFL +IV +++ D LGGG Sbjct: 125 AAAITRTDIFDFLVDIVPRDEIKDEAAVLGGG 156
>Q9FMV5:NFYC4_ARATH Nuclear transcription factor Y subunit C-4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 250 Score = 60.8 bits (146), Expect = 9e-09 Identities = 32/77 (41%), Positives = 47/77 (61%) Frame = +1 Query: 154 RFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHL 333 + P ARIKKIM+ADEDV I+ P+L ++A ELF+ +L RS+ ++ +TL + Sbjct: 78 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137 Query: 334 KQCVKRYSSFDFLTEIV 384 + R FDFL +IV Sbjct: 138 AAAITRTDIFDFLVDIV 154
>Q8LCG7:NFYC2_ARATH Nuclear transcription factor Y subunit C-2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 199 Score = 59.3 bits (142), Expect = 3e-08 Identities = 30/75 (40%), Positives = 47/75 (62%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ADEDV I+ PV+ ++A E+F+ +L R++ T ++ +TL + Sbjct: 78 PLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAA 137 Query: 340 CVKRYSSFDFLTEIV 384 + R FDFL +I+ Sbjct: 138 AISRTDVFDFLVDII 152
>Q62725:NFYC_RAT Nuclear transcription factor Y subunit gamma - Rattus norvegicus| (Rat) Length = 335 Score = 57.8 bits (138), Expect = 7e-08 Identities = 29/75 (38%), Positives = 46/75 (61%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ DEDV I+ PVL ++A ++F+ +L R++ T + +TL + Sbjct: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103 Query: 340 CVKRYSSFDFLTEIV 384 + ++ FDFL +IV Sbjct: 104 AITKFDQFDFLIDIV 118
>Q5RA23:NFYC_PONPY Nuclear transcription factor Y subunit gamma - Pongo pygmaeus| (Orangutan) Length = 335 Score = 57.8 bits (138), Expect = 7e-08 Identities = 29/75 (38%), Positives = 46/75 (61%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ DEDV I+ PVL ++A ++F+ +L R++ T + +TL + Sbjct: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103 Query: 340 CVKRYSSFDFLTEIV 384 + ++ FDFL +IV Sbjct: 104 AITKFDQFDFLIDIV 118
>P70353:NFYC_MOUSE Nuclear transcription factor Y subunit gamma - Mus musculus (Mouse)| Length = 335 Score = 57.8 bits (138), Expect = 7e-08 Identities = 29/75 (38%), Positives = 46/75 (61%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ DEDV I+ PVL ++A ++F+ +L R++ T + +TL + Sbjct: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103 Query: 340 CVKRYSSFDFLTEIV 384 + ++ FDFL +IV Sbjct: 104 AITKFDQFDFLIDIV 118
>Q13952:NFYC_HUMAN Nuclear transcription factor Y subunit gamma - Homo sapiens (Human)| Length = 458 Score = 57.8 bits (138), Expect = 7e-08 Identities = 29/75 (38%), Positives = 46/75 (61%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ DEDV I+ PVL ++A ++F+ +L R++ T + +TL + Sbjct: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103 Query: 340 CVKRYSSFDFLTEIV 384 + ++ FDFL +IV Sbjct: 104 AITKFDQFDFLIDIV 118
>Q5E9X1:NFYC_BOVIN Nuclear transcription factor Y subunit gamma - Bos taurus (Bovine)| Length = 335 Score = 57.8 bits (138), Expect = 7e-08 Identities = 29/75 (38%), Positives = 46/75 (61%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARIKKIM+ DEDV I+ PVL ++A ++F+ +L R++ T + +TL + Sbjct: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103 Query: 340 CVKRYSSFDFLTEIV 384 + ++ FDFL +IV Sbjct: 104 AITKFDQFDFLIDIV 118
>Q02516:HAP5_YEAST Transcriptional activator HAP5 - Saccharomyces cerevisiae (Baker's| yeast) Length = 242 Score = 57.8 bits (138), Expect = 7e-08 Identities = 25/79 (31%), Positives = 50/79 (63%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ARI+K+M+ DEDV I+ P++ ++A E+F+ +L R++ + ++ +TL + + Sbjct: 161 PFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAE 220 Query: 340 CVKRYSSFDFLTEIVNKVP 396 +++ FDFL ++V + P Sbjct: 221 ALQKSDMFDFLIDVVPRRP 239
>Q9FGP7:NFYC6_ARATH Nuclear transcription factor Y subunit C-6 - Arabidopsis thaliana| (Mouse-ear cress) Length = 202 Score = 55.8 bits (133), Expect = 3e-07 Identities = 28/79 (35%), Positives = 46/79 (58%) Frame = +1 Query: 154 RFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHL 333 + P ARIKKIM+AD DV ++ P++ ++A E+F+ DL RS+ ++ TL + Sbjct: 54 QLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDI 113 Query: 334 KQCVKRYSSFDFLTEIVNK 390 V ++DFL ++V K Sbjct: 114 SNAVASSFTYDFLLDVVPK 132
>Q9FGP6:NFYC5_ARATH Nuclear transcription factor Y subunit C-5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 186 Score = 54.7 bits (130), Expect = 6e-07 Identities = 31/78 (39%), Positives = 44/78 (56%) Frame = +1 Query: 157 FPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLK 336 FP +RIK+IM+ D DV IA P L+S+A E+F+ DL RS+ +S T+ + Sbjct: 37 FPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVD 96 Query: 337 QCVKRYSSFDFLTEIVNK 390 V + FDFL + V K Sbjct: 97 AVVSQTVIFDFLRDDVPK 114
>Q4PSE2:NFYC8_ARATH Nuclear transcription factor Y subunit C-8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 187 Score = 53.9 bits (128), Expect = 1e-06 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P RIKKIM+ D DV IA P+L+S+A E+F+ DL RS+ +S TL ++ Sbjct: 38 PITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDA 97 Query: 340 CVKRYSSFDFLTE 378 V + FDFL + Sbjct: 98 AVAQTVIFDFLLD 110
>Q9FGP8:NFYC7_ARATH Nuclear transcription factor Y subunit C-7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 212 Score = 52.8 bits (125), Expect = 2e-06 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Frame = +1 Query: 115 IGGATKMRKKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKIT 294 +G AT ++ FP RIKKIM+++ +V + PVL+S+A E+ + DL RS+ T Sbjct: 53 MGNATDVKHHA---FPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHT 109 Query: 295 LQSG------AKTLNSFHLKQCVKRYSSFDFLTEIVNKVPDL 402 ++ G + TL + R F FL ++V + P + Sbjct: 110 VEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRDPSV 151
>P79007:HAP5_SCHPO Transcriptional activator hap5 - Schizosaccharomyces pombe (Fission| yeast) Length = 415 Score = 48.5 bits (114), Expect = 5e-05 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = +1 Query: 160 PAARIKKIMQADEDVGK--IALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHL 333 P ARIKK+M+ D+DV I+ P L ++ E+F+ +L R++ ++ +TL + Sbjct: 110 PLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDI 169 Query: 334 KQCVKRYSSFDFLTEIVNK 390 V + +DFL +I++K Sbjct: 170 ANAVSKSEMYDFLIDIISK 188
>Q9CQ36:DPOE4_MOUSE DNA polymerase epsilon subunit 4 - Mus musculus (Mouse)| Length = 118 Score = 42.4 bits (98), Expect = 0.003 Identities = 23/74 (31%), Positives = 37/74 (50%) Frame = +1 Query: 151 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFH 330 +R P AR+K +++AD DV +++RA ELF++ + +Y Q KTL Sbjct: 40 SRLPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRD 99 Query: 331 LKQCVKRYSSFDFL 372 L ++ F FL Sbjct: 100 LDNAIEAVDEFAFL 113
>Q9NR33:DPOE4_HUMAN DNA polymerase epsilon subunit 4 - Homo sapiens (Human)| Length = 117 Score = 42.4 bits (98), Expect = 0.003 Identities = 23/74 (31%), Positives = 37/74 (50%) Frame = +1 Query: 151 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFH 330 +R P AR+K +++AD DV +++RA ELF++ + +Y Q KTL Sbjct: 39 SRLPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRD 98 Query: 331 LKQCVKRYSSFDFL 372 L ++ F FL Sbjct: 99 LDNAIEAVDEFAFL 112
>Q9NRG0:CHRC1_HUMAN Chromatin accessibility complex protein 1 - Homo sapiens (Human)| Length = 131 Score = 40.8 bits (94), Expect = 0.009 Identities = 25/77 (32%), Positives = 39/77 (50%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P +RI+ IM++ +V I VL ++A ELF+Q L SY+ K L L Sbjct: 20 PLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDLAN 79 Query: 340 CVKRYSSFDFLTEIVNK 390 ++ +F FL +I+ K Sbjct: 80 TAQQSETFQFLADILPK 96
>Q9JKP8:CHRC1_MOUSE Chromatin accessibility complex protein 1 - Mus musculus (Mouse)| Length = 129 Score = 37.7 bits (86), Expect = 0.080 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P +RI+ IM++ +V I VL ++A ELF+Q L SY+ K L L Sbjct: 20 PLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATCSYRHGSGKAKKALTYSDLAS 79 Query: 340 CVKRYSSFDFLTEIVNK 390 + + FL +I+ K Sbjct: 80 TAEDSETLQFLADILPK 96
>Q6BX14:DPB3_DEBHA DNA polymerase epsilon subunit C - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 277 Score = 35.4 bits (80), Expect = 0.40 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = +1 Query: 160 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQ 339 P ++IKKI + D D + + A ELF+Q ++S + K L Sbjct: 93 PLSKIKKIFKMDPDYLAASQSAVYATGLATELFIQYFTEQSLVLAKMDKRKKLQYKDFSN 152 Query: 340 CVKRYSSFDFLTEIVNKVPDLG 405 V S +FL++ V K +G Sbjct: 153 AVASQDSLNFLSDTVPKTQPIG 174
>Q9FVE0:AGP11_ARATH Classical arabinogalactan protein 11 precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 136 Score = 35.4 bits (80), Expect = 0.40 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%) Frame = +1 Query: 682 RGNESIPQSSHPVAEAP------SAATPAVTSKVEEASTNHQPDWPMPDAIGGIGVGPSS 843 + + + P++S PVAE P SAA+P+ ++ EA T P P P+A G GPSS Sbjct: 45 KSSAAAPKASSPVAEEPTPEDDYSAASPSDSA---EAPTVSSPPAPTPEADGPSSDGPSS 101 Query: 844 FG 849 G Sbjct: 102 DG 103
>P30646:YNE7_CAEEL Uncharacterized sugar kinase R08D7.7 - Caenorhabditis elegans| Length = 537 Score = 34.3 bits (77), Expect = 0.89 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%) Frame = +1 Query: 49 QSSTRTRKENTRKDCRHRTRRGIGGATKMRKKLGTR----FPAARIKKIMQADEDVGKIA 216 Q S +T K C+ +GG +M K G+R F AA+IKKI+ +DV K Sbjct: 126 QKSPIWMDSSTEKQCQE-LETFVGGDQEMAKLTGSRAHHRFSAAQIKKIVDEKQDVWKDT 184 Query: 217 LAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQCVKRYSSFDFLT 375 V ++ S F L+ Y + + +N ++K FDF++ Sbjct: 185 EKVSLISS-----FFASLLIGKYALIELTDGSGMNLMNIKTENWHKPLFDFIS 232
>Q9ZWJ9:ARR2_ARATH Two-component response regulator ARR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 664 Score = 32.7 bits (73), Expect = 2.6 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = +1 Query: 622 SMFAEQSEPLPGDEIVPET----NRGNESIPQSSHPVAEAPSAATPAVTSKVEEASTNHQ 789 ++ S P ++P T N +P+SS P+A AP + P S EE +++ Sbjct: 434 ALAVRNSIPETNSRVLPTTHSVFNNFPADLPRSSFPLASAPGISVPVSVSYQEEVNSS-- 491 Query: 790 PDWPMPDAIGGIGVGPSSFG 849 DA GG + FG Sbjct: 492 ------DAKGGSSAATAGFG 505
>Q6CLM5:DPB3_KLULA DNA polymerase epsilon subunit C - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 166 Score = 32.3 bits (72), Expect = 3.4 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +1 Query: 154 RFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRS---YKITLQSGAKTLNS 324 R P ++ KKI + D + + A + ELF+Q L + + +I Q+ LN Sbjct: 10 RIPISKCKKIARTDPEYILTSQAAFAATAFTTELFIQMLAEETCSLAQIHKQTKTLRLNY 69 Query: 325 FHLKQCVKRYSSFDFLTEIVNKVPDL 402 L ++ F FL+++V + +L Sbjct: 70 EDLSTAIRNLDKFQFLSDVVPQTENL 95
>P11716:RYR1_RABIT Ryanodine receptor 1 - Oryctolagus cuniculus (Rabbit)| Length = 5037 Score = 32.0 bits (71), Expect = 4.4 Identities = 22/75 (29%), Positives = 34/75 (45%) Frame = +1 Query: 574 PTKRKEIGYVQFEDESSMFAEQSEPLPGDEIVPETNRGNESIPQSSHPVAEAPSAATPAV 753 P ++++G V E+E + + EP P E E N E +P++ E P A P+ Sbjct: 4471 PILKRKLG-VDGEEEELVPEPEPEPEPEPEKADEENGEKEEVPEAP---PEPPKKAPPSP 4526 Query: 754 TSKVEEASTNHQPDW 798 +K EEA W Sbjct: 4527 PAKKEEAGGAGMEFW 4541
>Q80TZ9:RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein - Mus musculus| (Mouse) Length = 1558 Score = 32.0 bits (71), Expect = 4.4 Identities = 55/252 (21%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Frame = +1 Query: 100 RTRRGIGGATKMR--KKLGTRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLI 273 RTRR G + +R +K P R I +ED+ P S + + + Sbjct: 573 RTRRSRGSMSTLRSGRKKQPTSPDGRASPI---NEDIRSSGRNSPSAASTSSNDSKAETV 629 Query: 274 DRSYKITLQSGAKTLNSFHLKQCVKRYSSFDFLTEIVNKV-----------PDLGGGESC 420 +S K + A L S +Q K S + I +K P G GES Sbjct: 630 KKSAKKVKEEAASPLKSTK-RQREKVASDTEDTDRITSKKTKTQEISRPNSPSEGEGES- 687 Query: 421 GDERGLPRRRKFSNGSDPENEEPRSSKMPIRNLNTSPXXXXXXXXXXXXXPPTKRKEIGY 600 D R + ++ S +P N S PP + G Sbjct: 688 SDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPSGA 747 Query: 601 VQFEDESSMFAEQ---SEPLPGDEIVPETNRGNESIPQSSHPVAEAPSAATPAVTSKVEE 771 + Q P P VP + P +S P + S PA + +++ Sbjct: 748 ASAPSTAPPGTPQLPTQGPTPSATAVPP-----QGSPATSQPPNQTQSTVAPAAHTHIQQ 802 Query: 772 ASTNHQPDWPMP 807 A T H P P P Sbjct: 803 APTLHPPRLPSP 814
>Q9TTA1:P53_TUPGB Cellular tumor antigen p53 - Tupaia glis belangeri (Common tree| shrew) Length = 393 Score = 31.6 bits (70), Expect = 5.7 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +1 Query: 697 IPQSSHPVAEAPSAATPAVTSKVEEASTNHQPDWPMPDAIGGIGVGPSSFGY 852 +P+++ PVA AP+A TPA + P WP+ ++ S+G+ Sbjct: 66 MPEAAPPVAPAPAAPTPAAPAPA--------PSWPLSSSVPSQKTYQGSYGF 109
>P04637:P53_HUMAN Cellular tumor antigen p53 - Homo sapiens (Human)| Length = 393 Score = 31.6 bits (70), Expect = 5.7 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +1 Query: 697 IPQSSHPVAEAPSAATPAVTSKVEEASTNHQPDWPMPDAIGGIGVGPSSFGY 852 +P+++ PVA AP+A TPA + P WP+ ++ S+G+ Sbjct: 66 MPEAAPPVAPAPAAPTPAAPAPA--------PSWPLSSSVPSQKTYQGSYGF 109
>O77788:NFM_BOVIN Neurofilament medium polypeptide - Bos taurus (Bovine)| Length = 926 Score = 31.6 bits (70), Expect = 5.7 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = +1 Query: 670 PETNRGNESIPQSSHPVAEAPSAATPAVTSKVEEASTNHQPDWPMPDAIGGIGVGPSS 843 P T P++ P A++P+A +P S V ++ T P+ P+A P++ Sbjct: 626 PTTKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPTAKSPEAKSPEAKSPTAKSPTA 683
>Q9T076:ENL2_ARATH Early nodulin-like protein 2 precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 349 Score = 31.2 bits (69), Expect = 7.5 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = +1 Query: 625 MFAEQSEPLPGDEIVPETNRGNESIPQSSHPVAEAPSAATPAVTSKVEEASTNHQP-DWP 801 M + S +P P T+ P+SS PV+ +P+ + S ST+ P D P Sbjct: 241 MAPKSSSTIPPSS-APMTSPPGSMAPKSSSPVSNSPTVS----PSLAPGGSTSSSPSDSP 295 Query: 802 MPDAIGGIGVGPSSFG 849 A+G G GPS+ G Sbjct: 296 SGSAMGPSGDGPSAAG 311
>Q20EU8:YCF78_OLTVI Uncharacterized membrane protein ycf78 - Oltmannsiellopsis viridis| (Marine flagellate) Length = 808 Score = 30.8 bits (68), Expect = 9.8 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = -2 Query: 130 LSHLRYLVGFDAGNPFVYFLFSFLLTIGILVLLSFHHL 17 L+H+ YL+G AGN LF FLL I ++ F +L Sbjct: 248 LTHISYLLGLTAGNILFTLLFGFLLLQLINQVVKFSNL 285
>Q9PJY1:PMPC_CHLMU Probable outer membrane protein pmpC precursor - Chlamydia| muridarum Length = 1460 Score = 30.8 bits (68), Expect = 9.8 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = +1 Query: 610 EDESSMFAEQSEPLPGDEIVPETNRGNESIPQSSHPVAEAPSAATPAVTSKVEEASTNHQ 789 + SS + +E P + N G+E+ SS P A+ P+ ATP ++S STN Q Sbjct: 303 DSNSSGNTDSNESNPNNSA--SNNTGSENELSSSTPSAQLPNPATPFLSS----VSTNSQ 356 Query: 790 P 792 P Sbjct: 357 P 357 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 191,865,057 Number of extensions: 4348957 Number of successful extensions: 12719 Number of sequences better than 10.0: 38 Number of HSP's gapped: 12697 Number of HSP's successfully gapped: 38 Length of query: 352 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 238 Effective length of database: 69,416,809 Effective search space: 16521200542 Effective search space used: 16521200542 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
