ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf20l20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009305.1| Triticum aestivum clone wlm1.pk0016.f3:fis, full insert mRNA sequence Length = 950 Score = 1570 bits (792), Expect = 0.0 Identities = 879/907 (96%), Gaps = 2/907 (0%) Strand = Plus / Plus Query: 135 gaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagcaga 194 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 gaggaagaagctgggcacccggttccccgcggcacggatcaaaaagataatgcaagcaga 67 Query: 195 tgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagcccttgaatt 254 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 68 tgaggatgttggcaaaattgcactggctgtgcctgttttagtttcgagagcccttgaatt 127 Query: 255 gtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgcaaagac 314 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 128 gtttctgcaagatttgatcgaccactcatacaaaattactcttcaaagtggtgcaaagac 187 Query: 315 actgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttcctaac 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 actgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttcctaac 247 Query: 375 tgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaaagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 tgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaaagagg 307 Query: 435 attacccagaagaaggaaattttcaaatggaagtgacccagagaatgaggagccccgatc 494 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 308 attacccagaagaaggaaattttcaaatggaagcgacccagagaatgaggagccccgatc 367 Query: 495 tagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcagaggtcgagg 554 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 368 tagcaaaatgcccataagaagcttgaacaccagtcccagaggacgaggcagaggtcgagg 427 Query: 555 aagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacagtttgagga 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 aagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacagtttgagga 487 Query: 615 tgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagatagttccaga 674 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 488 tgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagatagttccgga 547 Query: 675 gaccaatcgtggcaatgagagtattccccaaagctcacatcctgtagcggaggctccatc 734 |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 548 gaccaaccgtggcaatgagagtattccccaaagctcacatcctctagtggaggctccatc 607 Query: 735 agctgcgacgccagctgtgacttcaaaggttgaagaagctagcaccaaccatcagccgga 794 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 608 agccatgacgccagctgtgatttcaaaggttgaagaagctagcaccaaccatcagccaga 667 Query: 795 ttggcctatgccagatgccattggaggcattggtgttggaccatccagttttggatatct 854 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 668 ttggcctatgccagatgccattggaggcattggtgttggaccatccagttttggacatct 727 Query: 855 gacggtgcaggttgatgaggaagaggactacgataatgaggattaggc--aggcattctc 912 ||| |||||||||||||||| |||||||||||| |||||||||||||| || ||| ||| Sbjct: 728 gacagtgcaggttgatgaggtagaggactacgacaatgaggattaggcatagtcatcctc 787 Query: 913 tcattcatcatatgctctaacaggacagttctcctggtgttgtacattgtaaatattgtt 972 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 tcattcatcatatgctctaacaggacagttctcctggtgttgtacattgtaaatattgtt 847 Query: 973 tcaagtagttaccgcagctatgatgtataacctatttctttttcccaataattggttctt 1032 |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 848 tcaagtagttactgcagctatgatgtgtaacctatttctttttcccaataattggttctg 907 Query: 1033 agttgcc 1039 ||||||| Sbjct: 908 agttgcc 914
>ref|NM_001074587.1| Oryza sativa (japonica cultivar-group) Os11g0544700 (Os11g0544700) mRNA, complete cds Length = 1046 Score = 505 bits (255), Expect = e-140 Identities = 479/553 (86%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaa 189 ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 42 aagatgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcag 101 Query: 190 gcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagccctt 249 || |||||||| |||||||| |||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 102 gctgatgaggacgttggcaagattgcactagctgtacctgttttagtatcgagggccctt 161 Query: 250 gaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgca 309 ||||||||| |||||||||| || ||||| | ||| ||||||| || ||||| |||||| Sbjct: 162 gaattgtttttgcaagatttaattgaccgaacttacgaaattacactgcaaagtggtgca 221 Query: 310 aagacactgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttc 369 |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 222 aagacattgaattccttccacctaaagcaatgtgtgaggaggtacagttcttttgacttc 281 Query: 370 ctaactgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaa 429 ||||||||| ||||||||||||| || || |||||||||| ||| || ||||||||||| Sbjct: 282 ctaactgaggttgtcaacaaggtaccggacctcggtggcgctgactcatgtggagatgat 341 Query: 430 agaggattacccagaagaaggaaa---ttttcaaatggaagtgacccagagaatgaggag 486 |||| ||||||||||||||| ||| || |||||||||||||||||||||||||||| Sbjct: 342 agagcattacccagaagaagaaaagccttgccaaatggaagtgacccagagaatgaggaa 401 Query: 487 ccccgatctagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcaga 546 | ||||| ||||||||| || |||||| || | |||||||||||||| || ||| Sbjct: 402 tctcgatcaagcaaaatggccgtaagaagtgcaaatatcagtcccagaggacgtgggaga 461 Query: 547 ggtcgaggaagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacag 606 |||||||| ||||||||||| || || || |||||| | |||||| ||||||||||||| Sbjct: 462 ggtcgaggtagagggcgaggacgaccacccaccaagcggaaggaagttggttatgtacaa 521 Query: 607 tttgaggatgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagata 666 ||||||||||||||||||||||||||||| || | ||| |||| |||||||| |||| Sbjct: 522 tttgaggatgagagcagcatgtttgctgatcagggcgaagccttaccaggagaggagacg 581 Query: 667 gttccagagacca 679 ||||||||||||| Sbjct: 582 gttccagagacca 594 Score = 133 bits (67), Expect = 1e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 782 accatcagccggattggcctatgccagatgccattggaggcattggtgttggaccatcca 841 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 703 accatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccg 762 Query: 842 gttttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattag 900 |||||||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 763 gttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattag 821 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 923 tatgctctaacaggacagttctcctggtgttgtacattgtaaatat 968 ||||| |||||||| ||||||||||||||||||| | ||||||||| Sbjct: 843 tatgcactaacagggcagttctcctggtgttgtaaaatgtaaatat 888
>gb|AF464904.1| Oryza sativa repressor protein (DrAp1) mRNA, complete cds Length = 1024 Score = 505 bits (255), Expect = e-140 Identities = 479/553 (86%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaa 189 ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 52 aagatgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcag 111 Query: 190 gcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagccctt 249 || |||||||| |||||||| |||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 112 gctgatgaggacgttggcaagattgcactagctgtacctgttttagtatcgagggccctt 171 Query: 250 gaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgca 309 ||||||||| |||||||||| || ||||| | ||| ||||||| || ||||| |||||| Sbjct: 172 gaattgtttttgcaagatttaattgaccgaacttacgaaattacactgcaaagtggtgca 231 Query: 310 aagacactgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttc 369 |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 232 aagacattgaattccttccacctaaagcaatgtgtgaggaggtacagttcttttgacttc 291 Query: 370 ctaactgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaa 429 ||||||||| ||||||||||||| || || |||||||||| ||| || ||||||||||| Sbjct: 292 ctaactgaggttgtcaacaaggtaccggacctcggtggcgctgactcatgtggagatgat 351 Query: 430 agaggattacccagaagaaggaaa---ttttcaaatggaagtgacccagagaatgaggag 486 |||| ||||||||||||||| ||| || |||||||||||||||||||||||||||| Sbjct: 352 agagcattacccagaagaagaaaagccttgccaaatggaagtgacccagagaatgaggaa 411 Query: 487 ccccgatctagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcaga 546 | ||||| ||||||||| || |||||| || | |||||||||||||| || ||| Sbjct: 412 tctcgatcaagcaaaatggccgtaagaagtgcaaatatcagtcccagaggacgtgggaga 471 Query: 547 ggtcgaggaagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacag 606 |||||||| ||||||||||| || || || |||||| | |||||| ||||||||||||| Sbjct: 472 ggtcgaggtagagggcgaggacgaccacccaccaagcggaaggaagttggttatgtacaa 531 Query: 607 tttgaggatgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagata 666 ||||||||||||||||||||||||||||| || | ||| |||| |||||||| |||| Sbjct: 532 tttgaggatgagagcagcatgtttgctgatcagggcgaagccttaccaggagaggagacg 591 Query: 667 gttccagagacca 679 ||||||||||||| Sbjct: 592 gttccagagacca 604 Score = 133 bits (67), Expect = 1e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 782 accatcagccggattggcctatgccagatgccattggaggcattggtgttggaccatcca 841 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 713 accatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccg 772 Query: 842 gttttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattag 900 |||||||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 773 gttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattag 831 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 923 tatgctctaacaggacagttctcctggtgttgtacattgtaaatat 968 ||||| |||||||| ||||||||||||||||||| | ||||||||| Sbjct: 853 tatgcactaacagggcagttctcctggtgttgtaaaatgtaaatat 898
>dbj|AK072844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143I16, full insert sequence Length = 1049 Score = 505 bits (255), Expect = e-140 Identities = 479/553 (86%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaa 189 ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 44 aagatgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcag 103 Query: 190 gcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagccctt 249 || |||||||| |||||||| |||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 104 gctgatgaggacgttggcaagattgcactagctgtacctgttttagtatcgagggccctt 163 Query: 250 gaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgca 309 ||||||||| |||||||||| || ||||| | ||| ||||||| || ||||| |||||| Sbjct: 164 gaattgtttttgcaagatttaattgaccgaacttacgaaattacactgcaaagtggtgca 223 Query: 310 aagacactgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttc 369 |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 224 aagacattgaattccttccacctaaagcaatgtgtgaggaggtacagttcttttgacttc 283 Query: 370 ctaactgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaa 429 ||||||||| ||||||||||||| || || |||||||||| ||| || ||||||||||| Sbjct: 284 ctaactgaggttgtcaacaaggtaccggacctcggtggcgctgactcatgtggagatgat 343 Query: 430 agaggattacccagaagaaggaaa---ttttcaaatggaagtgacccagagaatgaggag 486 |||| ||||||||||||||| ||| || |||||||||||||||||||||||||||| Sbjct: 344 agagcattacccagaagaagaaaagccttgccaaatggaagtgacccagagaatgaggaa 403 Query: 487 ccccgatctagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcaga 546 | ||||| ||||||||| || |||||| || | |||||||||||||| || ||| Sbjct: 404 tctcgatcaagcaaaatggccgtaagaagtgcaaatatcagtcccagaggacgtgggaga 463 Query: 547 ggtcgaggaagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacag 606 |||||||| ||||||||||| || || || |||||| | |||||| ||||||||||||| Sbjct: 464 ggtcgaggtagagggcgaggacgaccacccaccaagcggaaggaagttggttatgtacaa 523 Query: 607 tttgaggatgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagata 666 ||||||||||||||||||||||||||||| || | ||| |||| |||||||| |||| Sbjct: 524 tttgaggatgagagcagcatgtttgctgatcagggcgaagccttaccaggagaggagacg 583 Query: 667 gttccagagacca 679 ||||||||||||| Sbjct: 584 gttccagagacca 596 Score = 125 bits (63), Expect = 3e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 782 accatcagccggattggcctatgccagatgccattggaggcattggtgttggaccatcca 841 ||||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||| Sbjct: 705 accatcagccggattggcctatgccagatgcgattgggaacatcggtgtcggaccatccg 764 Query: 842 gttttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattag 900 |||||||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 765 gttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattag 823 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 923 tatgctctaacaggacagttctcctggtgttgtacattgtaaatat 968 ||||| |||||||| ||||||||||||||||||| | ||||||||| Sbjct: 845 tatgcactaacagggcagttctcctggtgttgtaaaatgtaaatat 890
>gb|AF464905.1| Zea mays repressor protein (DrAp1) mRNA, complete cds Length = 1002 Score = 496 bits (250), Expect = e-137 Identities = 477/552 (86%), Gaps = 3/552 (0%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaa 189 ||||||||||||||| | |||||||||||||||||||| || |||||||||||||||||| Sbjct: 15 aagatgaggaagaagctcggcacccggttccccgcggctcgaatcaaaaagataatgcaa 74 Query: 190 gcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagccctt 249 ||||||||||||||||| || |||||| | || || ||||||||||| ||||| | ||| Sbjct: 75 gcagatgaggatgttggaaagattgcactagcagttcctgttttagtttcgaggtctctt 134 Query: 250 gaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgca 309 ||||||||| | |||||||| || ||||| | || |||||||||||||||| || ||| Sbjct: 135 gaattgtttttacaagatttaattgaccgtacttatgaaattactcttcaaagtggagca 194 Query: 310 aagacactgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttc 369 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 195 aagacactgaattccttccacctgaagcaatgtgtgaagaggtacagttcttttgatttc 254 Query: 370 ctaactgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaa 429 |||||||| |||||| |||||| |||||||| ||||||| ||| || |||||||||||| Sbjct: 255 ctaactgaagttgtcagcaaggtaccagatcttggtggcgctgattcctgtggagatgaa 314 Query: 430 agaggattacccagaagaaggaaattttcaaatggaagtgacccagagaatgaggagccc 489 ||||||||||| |||||||| || |||||||| ||||||||||||||||| || | Sbjct: 315 agaggattacctagaagaagaaa---gtcaaatggcagtgacccagagaatgatgaatca 371 Query: 490 cgatctagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcagaggt 549 ||||||| |||||| |||||||||| |||| || ||||||||||| || || ||| Sbjct: 372 agatctagtaaaatggccataagaaatgcaaacatcagccccagaggacgtgggaggggt 431 Query: 550 cgaggaagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacagttt 609 ||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 432 cgaggcagaggacgaggtcggccaccaaccaagagaaaggaggttggttatgtacaattt 491 Query: 610 gaggatgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagatagtt 669 || ||||||||||||||||||||||||||| |||| |||||||||||||| || | |||| Sbjct: 492 gaagatgagagcagcatgtttgctgaacaaggtgagcccttgccaggagaggaaacagtt 551 Query: 670 ccagagaccaat 681 | ||||| |||| Sbjct: 552 caagagatcaat 563 Score = 95.6 bits (48), Expect = 3e-16 Identities = 104/122 (85%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 784 catcagccggattggcctatgccagatgccattggaggcattggtgttggaccatccagt 843 |||||| | ||||||||||||||||||||||||||| |||| ||||| | ||||| || Sbjct: 669 catcagtcagattggcctatgccagatgccattggaagcatcggtgtcgtgccatctggt 728 Query: 844 tttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattaggca 903 |||||| ||||||| |||||||| ||| || ||||||||||| |||||||||||| || Sbjct: 729 tttggacatctgacagtgcaggt---tgaagatgaggactacgacaatgaggattagtca 785 Query: 904 gg 905 || Sbjct: 786 gg 787
>emb|CT834428.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106J24, full insert sequence Length = 1587 Score = 484 bits (244), Expect = e-133 Identities = 477/553 (86%), Gaps = 5/553 (0%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaa 189 ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 78 aagatgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcag 137 Query: 190 gcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagccctt 249 || |||||||| |||||||| |||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 138 gctgatgaggacgttggcaagattgcactagctgtacctgttttagtatcgagggccctt 197 Query: 250 gaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgca 309 ||||||||| ||||| ||| || ||||| | ||| ||||||| || |||| |||||| Sbjct: 198 gaattgtttttgcaa--tttaattgaccgaacttacgaaattacactggaaagtggtgca 255 Query: 310 aagacactgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttc 369 |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 256 aagacattgaattccttccacctaaagcaatgtgtgaggaggtacagttcttttgacttc 315 Query: 370 ctaactgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaa 429 ||||||||| ||||||||||||| || || |||||||||| ||| || ||||||||||| Sbjct: 316 ctaactgaggttgtcaacaaggtaccggacctcggtggcgctgactcatgtggagatgat 375 Query: 430 agaggattacccagaagaaggaaa---ttttcaaatggaagtgacccagagaatgaggag 486 |||| ||||||||||||||| ||| || |||||||||||||||||||||||||||| Sbjct: 376 agagcattacccagaagaagaaaagccttgccaaatggaagtgacccagagaatgaggaa 435 Query: 487 ccccgatctagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcaga 546 | ||||| ||||||||| || |||||| || | |||||||||||||| || ||| Sbjct: 436 tctcgatcaagcaaaatggccgtaagaagtgcaaatatcagtcccagaggacgtgggaga 495 Query: 547 ggtcgaggaagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacag 606 |||||||| ||||||||||| || || || |||||| |||||||| ||||||||||||| Sbjct: 496 ggtcgaggtagagggcgaggacgaccacccaccaagcgaaaggaagttggttatgtacaa 555 Query: 607 tttgaggatgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagata 666 ||||||||||||||||||||||||||||| || | ||| |||| |||||||| |||| Sbjct: 556 tttgaggatgagagcagcatgtttgctgatcagggcgaagccttaccaggagaggagacg 615 Query: 667 gttccagagacca 679 ||||||||||||| Sbjct: 616 gttccagagacca 628 Score = 143 bits (72), Expect = 1e-30 Identities = 161/189 (85%), Gaps = 5/189 (2%) Strand = Plus / Plus Query: 782 accatcagccggattggcctatgccagatgccattggaggcattggtgttggaccatcca 841 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 737 accatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccg 796 Query: 842 gttttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattagg 901 |||||||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 797 gttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattagc 856 Query: 902 cagg--cattctctcattcatcatatgctctaacaggacagttctcctggtgttgtacat 959 |||| ||| ||| ||| | |||| |||||||| ||||||||||||||||||| | Sbjct: 857 cagggccatcttctgattgtt---atgcactaacagggcagttctcctggtgttgtaaaa 913 Query: 960 tgtaaatat 968 ||||||||| Sbjct: 914 tgtaaatat 922
>gb|AY109605.1| Zea mays CL181_1 mRNA sequence Length = 1147 Score = 394 bits (199), Expect = e-106 Identities = 458/547 (83%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 135 gaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagcaga 194 |||||||||| | |||||||| ||||||||||| || ||| ||||||||||||||| Sbjct: 111 gaggaagaagctcggcacccgattccccgcggctcgaatcnnnnngataatgcaagcaga 170 Query: 195 tgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagcccttgaatt 254 |||||||||||| || |||||| | || || ||||||||||| ||||| | |||||||| Sbjct: 171 tgaggatgttggaaagattgcactagcagttcctgttttagtttcgaggtctcttgaatt 230 Query: 255 gtttctgcaagatttgatcgaccgctcatacaaaattactcttcaaagcggtgcaaagac 314 | |||||||| || ||||| | || |||||||||||||||| || |||||||| Sbjct: 231 gnnnnnacaagatttaattgaccgtacttatgaaattactcttcaaagtggagcaaagac 290 Query: 315 actgaattccttccacctaaagcaatgtgtgaagaggtacagctcttttgacttcctaac 374 |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 291 actgaattccttccacctgaagcaatgtgtgaagaggtacagttcttttgatttcctaac 350 Query: 375 tgagattgtcaacaaggtgccagatctcggtggcggtgaatcttgtggagatgaaagagg 434 ||| |||||| |||||| |||||||| ||||| | ||| || |||||||||||||||| Sbjct: 351 tgaagttgtcagcaaggtaccagatcttggtggtgctgattcatgtggagatgaaagagt 410 Query: 435 attacccagaagaaggaaattttcaaatggaagtgacccagagaatgaggagccccgatc 494 ||||| |||||||| || |||||||| ||||||||||| ||||| || | |||| Sbjct: 411 gttacctagaagaagaaa---gtcaaatggcagtgacccagaaaatgatgaatcaagatc 467 Query: 495 tagcaaaatgcccataagaaacttgaacactagtcccagaggacgaggcagaggtcgagg 554 ||| |||||| |||||||||| |||| || ||||||||||| || || |||||||| Sbjct: 468 tagtaaaatggccataagaaatgcaaacatcagccccagaggacgtgggaggggtcgagg 527 Query: 555 aagagggcgagggcggcctccaaccaagagaaaggaaattggttatgtacagtttgagga 614 ||||| ||||| ||||| ||||||||||||||||| ||||||||||||| ||||| || Sbjct: 528 cagaggacgaggtcggccaccaaccaagagaaaggaggttggttatgtacaatttgaaga 587 Query: 615 tgagagcagcatgtttgctgaacaaagtgaacccttgccaggagatgagatagttccaga 674 ||||||||||||||||||||||||| |||| |||||||||||||| || | ||||| ||| Sbjct: 588 tgagagcagcatgtttgctgaacaaggtgagcccttgccaggagaggaaacagttcaaga 647 Query: 675 gaccaat 681 || |||| Sbjct: 648 gatcaat 654 Score = 93.7 bits (47), Expect = 1e-15 Identities = 97/113 (85%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 793 gattggcctatgccagatgccattggaggcattggtgttggaccatccagttttggatat 852 ||||||||||||||||||||||||||| |||| ||||| | ||||| |||||||| || Sbjct: 769 gattggcctatgccagatgccattggaagcatcggtgtcgtgccatctggttttggacat 828 Query: 853 ctgacggtgcaggttgatgaggaagaggactacgataatgaggattaggcagg 905 ||||| |||||||| ||| || ||||||||||| |||||||||||| |||| Sbjct: 829 ctgacagtgcaggt---tgaagatgaggactacgacaatgaggattagtcagg 878
>gb|BT017040.1| Zea mays clone EL01N0202G04.c mRNA sequence Length = 770 Score = 359 bits (181), Expect = 1e-95 Identities = 342/395 (86%), Gaps = 3/395 (0%) Strand = Plus / Plus Query: 287 aaattactcttcaaagcggtgcaaagacactgaattccttccacctaaagcaatgtgtga 346 |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 11 aaattactcttcaaagtggagcaaagacactgaattccttccacctgaagcaatgtgtga 70 Query: 347 agaggtacagctcttttgacttcctaactgagattgtcaacaaggtgccagatctcggtg 406 |||||||||| |||||||| ||||||||||| |||||| |||||| || ||||| |||| Sbjct: 71 agaggtacagttcttttgatttcctaactgaagttgtcagcaaggtacctgatcttggtg 130 Query: 407 gcggtgaatcttgtggagatgaaagaggattacccagaagaaggaaattttcaaatggaa 466 ||| ||| || ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 131 gcgctgattcctgtggagatgaaagaggattacctagaagaagaaa---gtcaaatggca 187 Query: 467 gtgacccagagaatgaggagccccgatctagcaaaatgcccataagaaacttgaacacta 526 |||||||||||||||| || | ||||||| |||||| |||||||||| |||| | Sbjct: 188 gtgacccagagaatgatgaatcaagatctagtaaaatggccataagaaatgcaaacatca 247 Query: 527 gtcccagaggacgaggcagaggtcgaggaagagggcgagggcggcctccaaccaagagaa 586 | ||||||||||| || || |||||||| ||||| ||||| ||||| ||||||||||||| Sbjct: 248 gccccagaggacgtgggaggggtcgaggcagaggacgaggtcggccaccaaccaagagaa 307 Query: 587 aggaaattggttatgtacagtttgaggatgagagcagcatgtttgctgaacaaagtgaac 646 |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||| | Sbjct: 308 aggaggttggttatgtacaatttgaagatgagagcagcatgtttgctgaacaaggtgagc 367 Query: 647 ccttgccaggagatgagatagttccagagaccaat 681 ||||||||||||| || | ||||| ||||| |||| Sbjct: 368 ccttgccaggagaggaaacagttcaagagatcaat 402 Score = 87.7 bits (44), Expect = 8e-14 Identities = 103/122 (84%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 784 catcagccggattggcctatgccagatgccattggaggcattggtgttggaccatccagt 843 |||||| | ||||||||||||||||||||||||||| |||| ||||| | ||||| || Sbjct: 508 catcagtcagattggcctatgccagatgccattggaagcatcggtgtcgtgccatctggt 567 Query: 844 tttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattaggca 903 |||||| ||||||| |||||||| ||| || ||||||||| | |||||||||||| || Sbjct: 568 tttggacatctgacagtgcaggt---tgaagatgaggactactacaatgaggattagtca 624 Query: 904 gg 905 || Sbjct: 625 gg 626
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 147 bits (74), Expect = 9e-32 Identities = 107/118 (90%) Strand = Plus / Plus Query: 333 aaagcaatgtgtgaagaggtacagctcttttgacttcctaactgagattgtcaacaaggt 392 |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 42934 aaagcaatgtgtgaggaggtacagttcttttgacttcctaactgaggttgtcaacaaggt 42993 Query: 393 gccagatctcggtggcggtgaatcttgtggagatgaaagaggattacccagaagaagg 450 || || |||||||||| ||| || ||||||||||| |||| |||||||||||||||| Sbjct: 42994 accggacctcggtggcgctgactcatgtggagatgatagagcattacccagaagaagg 43051 Score = 147 bits (74), Expect = 9e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 526 agtcccagaggacgaggcagaggtcgaggaagagggcgagggcggcctccaaccaagaga 585 |||||||||||||| || ||||||||||| ||||||||||| || || || |||||| | Sbjct: 43285 agtcccagaggacgtgggagaggtcgaggtagagggcgaggacgaccacccaccaagcgg 43344 Query: 586 aaggaaattggttatgtacagtttgaggatgagagcagcatgtttgctgaacaaagtgaa 645 |||||| ||||||||||||| ||||||||||||||||||||||||||||| || | ||| Sbjct: 43345 aaggaagttggttatgtacaatttgaggatgagagcagcatgtttgctgatcagggcgaa 43404 Query: 646 cccttgccaggagatgagatagttccagagacca 679 |||| |||||||| |||| ||||||||||||| Sbjct: 43405 gccttaccaggagaggagacggttccagagacca 43438 Score = 133 bits (67), Expect = 1e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 782 accatcagccggattggcctatgccagatgccattggaggcattggtgttggaccatcca 841 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 43547 accatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccg 43606 Query: 842 gttttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattag 900 |||||||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 43607 gttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattag 43665 Score = 91.7 bits (46), Expect = 5e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 239 cgagagcccttgaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttc 298 |||| ||||||||||||||| |||||||||| || ||||| | ||| ||||||| || | Sbjct: 42138 cgagggcccttgaattgtttttgcaagatttaattgaccgaacttacgaaattacactgc 42197 Query: 299 aaagcggtgcaaagacactgaattccttccacct 332 |||| |||||||||||| |||||||||||||||| Sbjct: 42198 aaagtggtgcaaagacattgaattccttccacct 42231 Score = 79.8 bits (40), Expect = 2e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 165 ggcacggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgt 224 |||||||||||||||||| ||||| || |||||||| |||||||| |||||| | ||||| Sbjct: 41609 ggcacggatcaaaaagatcatgcaggctgatgaggacgttggcaagattgcactagctgt 41668 Query: 225 gcctgttttagt 236 ||||||||||| Sbjct: 41669 acctgttttagt 41680 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 458 caaatggaagtgacccagagaatgaggagccccgatctagcaaaatg 504 |||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 43146 caaatggaagtgacccagagaatgaggaatctcgatcaagcaaaatg 43192 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 923 tatgctctaacaggacagttctcctggtgttgtacattgtaaatat 968 ||||| |||||||| ||||||||||||||||||| | ||||||||| Sbjct: 43687 tatgcactaacagggcagttctcctggtgttgtaaaatgtaaatat 43732 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcgg 166 ||||||||||||||| |||||||||| |||||||||| Sbjct: 40434 aagatgaggaagaagctgggcacccgcttccccgcgg 40470
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 147 bits (74), Expect = 9e-32 Identities = 107/118 (90%) Strand = Plus / Plus Query: 333 aaagcaatgtgtgaagaggtacagctcttttgacttcctaactgagattgtcaacaaggt 392 |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 19324383 aaagcaatgtgtgaggaggtacagttcttttgacttcctaactgaggttgtcaacaaggt 19324442 Query: 393 gccagatctcggtggcggtgaatcttgtggagatgaaagaggattacccagaagaagg 450 || || |||||||||| ||| || ||||||||||| |||| |||||||||||||||| Sbjct: 19324443 accggacctcggtggcgctgactcatgtggagatgatagagcattacccagaagaagg 19324500 Score = 147 bits (74), Expect = 9e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 526 agtcccagaggacgaggcagaggtcgaggaagagggcgagggcggcctccaaccaagaga 585 |||||||||||||| || ||||||||||| ||||||||||| || || || |||||| | Sbjct: 19324734 agtcccagaggacgtgggagaggtcgaggtagagggcgaggacgaccacccaccaagcgg 19324793 Query: 586 aaggaaattggttatgtacagtttgaggatgagagcagcatgtttgctgaacaaagtgaa 645 |||||| ||||||||||||| ||||||||||||||||||||||||||||| || | ||| Sbjct: 19324794 aaggaagttggttatgtacaatttgaggatgagagcagcatgtttgctgatcagggcgaa 19324853 Query: 646 cccttgccaggagatgagatagttccagagacca 679 |||| |||||||| |||| ||||||||||||| Sbjct: 19324854 gccttaccaggagaggagacggttccagagacca 19324887 Score = 133 bits (67), Expect = 1e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 782 accatcagccggattggcctatgccagatgccattggaggcattggtgttggaccatcca 841 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 19324996 accatcagccggattggcctatgccagatgcgattggaaacatcggtgtcggaccatccg 19325055 Query: 842 gttttggatatctgacggtgcaggttgatgaggaagaggactacgataatgaggattag 900 |||||||| |||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 19325056 gttttggacatcttacggtgcaagttgacgaggatgaggactacgacaacgaggattag 19325114 Score = 91.7 bits (46), Expect = 5e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 239 cgagagcccttgaattgtttctgcaagatttgatcgaccgctcatacaaaattactcttc 298 |||| ||||||||||||||| |||||||||| || ||||| | ||| ||||||| || | Sbjct: 19323587 cgagggcccttgaattgtttttgcaagatttaattgaccgaacttacgaaattacactgc 19323646 Query: 299 aaagcggtgcaaagacactgaattccttccacct 332 |||| |||||||||||| |||||||||||||||| Sbjct: 19323647 aaagtggtgcaaagacattgaattccttccacct 19323680 Score = 79.8 bits (40), Expect = 2e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 165 ggcacggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgt 224 |||||||||||||||||| ||||| || |||||||| |||||||| |||||| | ||||| Sbjct: 19323058 ggcacggatcaaaaagatcatgcaggctgatgaggacgttggcaagattgcactagctgt 19323117 Query: 225 gcctgttttagt 236 ||||||||||| Sbjct: 19323118 acctgttttagt 19323129 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 458 caaatggaagtgacccagagaatgaggagccccgatctagcaaaatg 504 |||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 19324595 caaatggaagtgacccagagaatgaggaatctcgatcaagcaaaatg 19324641 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 923 tatgctctaacaggacagttctcctggtgttgtacattgtaaatat 968 ||||| |||||||| ||||||||||||||||||| | ||||||||| Sbjct: 19325136 tatgcactaacagggcagttctcctggtgttgtaaaatgtaaatat 19325181 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 130 aagatgaggaagaagttgggcacccggttccccgcgg 166 ||||||||||||||| |||||||||| |||||||||| Sbjct: 19321883 aagatgaggaagaagctgggcacccgcttccccgcgg 19321919
>ref|NM_001062458.1| Oryza sativa (japonica cultivar-group) Os05g0494100 (Os05g0494100) mRNA, complete cds Length = 1209 Score = 99.6 bits (50), Expect = 2e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| ||| |||||| ||||||||| | ||||| || || || ||||||||| Sbjct: 114 atgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgcaagca 173 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagcccttgaa 252 ||||| ||||||||||| ||||| || ||||| |||||| ||||||| | ||| | ||| Sbjct: 174 gatgaagatgttggcaagattgctttagctgtacctgttctagtgtcaaaagcattggaa 233 Query: 253 ttgtttctgcaaga 266 || ||||||||||| Sbjct: 234 ttatttctgcaaga 247
>dbj|AK068320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150F08, full insert sequence Length = 1210 Score = 99.6 bits (50), Expect = 2e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| ||| |||||| ||||||||| | ||||| || || || ||||||||| Sbjct: 115 atgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgcaagca 174 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagtgtcgagagcccttgaa 252 ||||| ||||||||||| ||||| || ||||| |||||| ||||||| | ||| | ||| Sbjct: 175 gatgaagatgttggcaagattgctttagctgtacctgttctagtgtcaaaagcattggaa 234 Query: 253 ttgtttctgcaaga 266 || ||||||||||| Sbjct: 235 ttatttctgcaaga 248
>emb|CT828754.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI012N01, full insert sequence Length = 502 Score = 91.7 bits (46), Expect = 5e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| ||| |||||| ||||||||| | ||||| || || || ||||||||| Sbjct: 165 atgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgcaagca 224 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagtgt 238 ||||| ||||||||||| ||||| || ||||| |||||| |||||| Sbjct: 225 gatgaagatgttggcaagattgctttagctgtacctgttctagtgt 270
>gb|AC153161.23| Glycine max clone gmw1-77p13, complete sequence Length = 174762 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 169 cggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcct 228 ||||| || ||||||||||| ||||||||||||||||| || || ||| ||||||||||| Sbjct: 120018 cggataaagaagataatgcaggcagatgaggatgttggaaagatagcactggctgtgcct 120077 Query: 229 gttttagt 236 |||||||| Sbjct: 120078 gttttagt 120085
>dbj|AP004471.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15H09, TM0005, complete sequence Length = 97710 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 169 cggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcct 228 ||||| |||||||||||||||||||||||||||||||| || || || | ||||||||| Sbjct: 31267 cggataaaaaagataatgcaagcagatgaggatgttggaaagatagccctcgctgtgcct 31326 Query: 229 gttttagt 236 |||||||| Sbjct: 31327 gttttagt 31334
>gb|BT014143.1| Lycopersicon esculentum clone 133262F, mRNA sequence Length = 1352 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 163 gcggcacggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggct 222 ||||| |||||||| || || |||||||| ||||||||||| || || |||||| ||||| Sbjct: 209 gcggcccggatcaagaaaattatgcaagccgatgaggatgtcggtaagattgcaatggct 268 Query: 223 gtgcctgttttagtgtc 239 ||||||||| ||||||| Sbjct: 269 gtgcctgttctagtgtc 285
>gb|AC166642.28| Glycine max clone gmp1-97i15, complete sequence Length = 99138 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 169 cggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcct 228 ||||| || |||||||||||||| |||||||||||||| || || ||| | ||||||||| Sbjct: 25863 cggataaagaagataatgcaagctgatgaggatgttggaaagatagcactcgctgtgcct 25804 Query: 229 gttttagt 236 |||||||| Sbjct: 25803 gttttagt 25796
>gb|AC152056.19| Glycine max clone gmp1-98f7, complete sequence Length = 122930 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 169 cggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcct 228 ||||| || |||||||||||||| |||||||||||||| || || ||| | ||||||||| Sbjct: 117145 cggataaagaagataatgcaagctgatgaggatgttggaaagatagcactcgctgtgcct 117204 Query: 229 gttttagt 236 |||||||| Sbjct: 117205 gttttagt 117212
>ref|NM_112083.2| Arabidopsis thaliana DNA binding / transcription factor (AT3G12480) mRNA, complete cds Length = 1304 Score = 71.9 bits (36), Expect = 4e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| | | || |||||||| || || || || |||||||| |||||||| Sbjct: 229 atgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaagct 288 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagt 236 ||||||||||||||||| || || ||||| |||||||| ||||| Sbjct: 289 gatgaggatgttggcaagatagctttggcagtgcctgtcttagt 332
>gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence Length = 113397 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 169 cggatcaaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcct 228 ||||| || |||||||||||||| |||||||||||||| || || ||| | ||||||||| Sbjct: 87635 cggataaagaagataatgcaagctgatgaggatgttggaaagatagcactcgctgtgcct 87694 Query: 229 gttttagt 236 |||||||| Sbjct: 87695 gttttagt 87702
>gb|AY143847.1| Arabidopsis thaliana At3g12480/MQC3.32 mRNA, complete cds Length = 882 Score = 71.9 bits (36), Expect = 4e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| | | || |||||||| || || || || |||||||| |||||||| Sbjct: 1 atgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaagct 60 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagt 236 ||||||||||||||||| || || ||||| |||||||| ||||| Sbjct: 61 gatgaggatgttggcaagatagctttggcagtgcctgtcttagt 104
>gb|AC138452.10| Medicago truncatula clone mth2-17p11, complete sequence Length = 127710 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 181 ataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcctgttttagt 236 ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| Sbjct: 50345 ataatgcaagctgatgaagatgttggaaagatagcattggctgtgcctgttttagt 50290
>gb|AF462841.1|AF462841 Arabidopsis thaliana At3g12480/MQC3.32 mRNA, complete cds Length = 1258 Score = 71.9 bits (36), Expect = 4e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| | | || |||||||| || || || || |||||||| |||||||| Sbjct: 229 atgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaagct 288 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagt 236 ||||||||||||||||| || || ||||| |||||||| ||||| Sbjct: 289 gatgaggatgttggcaagatagctttggcagtgcctgtcttagt 332
>emb|BX842121.1|CNS09YDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB81ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1116 Score = 71.9 bits (36), Expect = 4e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcggcacggatcaaaaagataatgcaagca 192 |||||||||||| | | || |||||||| || || || || |||||||| |||||||| Sbjct: 228 atgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaagct 287 Query: 193 gatgaggatgttggcaaaattgcattggctgtgcctgttttagt 236 ||||||||||||||||| || || ||||| |||||||| ||||| Sbjct: 288 gatgaggatgttggcaagatagctttggcagtgcctgtcttagt 331
>gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete sequence Length = 105768 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 175 aaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcctgtttta 234 |||||||| |||||||| ||||||||||||||||| || || ||||| |||||||| ||| Sbjct: 68950 aaaaagattatgcaagctgatgaggatgttggcaagatagctttggcagtgcctgtctta 68891 Query: 235 gt 236 || Sbjct: 68890 gt 68889
>dbj|AP002047.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC3 Length = 86536 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 175 aaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcctgtttta 234 |||||||| |||||||| ||||||||||||||||| || || ||||| |||||||| ||| Sbjct: 72515 aaaaagattatgcaagctgatgaggatgttggcaagatagctttggcagtgcctgtctta 72574 Query: 235 gt 236 || Sbjct: 72575 gt 72576
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 61.9 bits (31), Expect = 4e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 184 atgcaagcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgt 238 |||||||||||||| ||||||||||| ||||| || ||||| |||||| |||||| Sbjct: 18464 atgcaagcagatgaagatgttggcaagattgctttagctgtacctgttctagtgt 18518 Score = 44.1 bits (22), Expect = 1.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcgg 166 |||||||||||| ||| |||||| |||||||||| Sbjct: 17126 atgaggaagaagctggacacccgcttccccgcgg 17159
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 61.9 bits (31), Expect = 4e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 184 atgcaagcagatgaggatgttggcaaaattgcattggctgtgcctgttttagtgt 238 |||||||||||||| ||||||||||| ||||| || ||||| |||||| |||||| Sbjct: 24132225 atgcaagcagatgaagatgttggcaagattgctttagctgtacctgttctagtgt 24132279 Score = 44.1 bits (22), Expect = 1.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 133 atgaggaagaagttgggcacccggttccccgcgg 166 |||||||||||| ||| |||||| |||||||||| Sbjct: 24130887 atgaggaagaagctggacacccgcttccccgcgg 24130920
>gb|DQ275146.1| Boechera stricta At3g12480-like protein, At3g12490-like protein, At3g12500-like protein, At3g12510-like protein, At3g12520-like protein, At3g12530-like protein, At3g12540-like protein, unknown protein, At3g12550-like protein, and At3g12560-like protein genes, complete cds Length = 25412 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 175 aaaaagataatgcaagcagatgaggatgttggcaaaattgcattggctgtgcctgtttta 234 |||||||| |||||||| ||||| ||||||||||| || || ||||| |||||||| ||| Sbjct: 1071 aaaaagattatgcaagctgatgaagatgttggcaagatagctttggcagtgcctgtctta 1130 Query: 235 gt 236 || Sbjct: 1131 gt 1132
>gb|AC096784.17| Mus musculus strain C57BL/6J chromosome 10 clone rp23-232l11, complete sequence Length = 202124 Score = 50.1 bits (25), Expect = 0.016 Identities = 25/25 (100%) Strand = Plus / Minus Query: 464 gaagtgacccagagaatgaggagcc 488 ||||||||||||||||||||||||| Sbjct: 107647 gaagtgacccagagaatgaggagcc 107623
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 995 atgtataacctatttctttttc 1016 |||||||||||||||||||||| Sbjct: 10382758 atgtataacctatttctttttc 10382737
>ref|XM_629593.1| Dictyostelium discoideum AX4 putative histone-like transcription factor (DDB_0220098) mRNA, complete cds Length = 1653 Score = 44.1 bits (22), Expect = 1.0 Identities = 40/46 (86%) Strand = Plus / Plus Query: 172 atcaaaaagataatgcaagcagatgaggatgttggcaaaattgcat 217 |||||||||||||||||| |||||| || || || |||||||||| Sbjct: 40 atcaaaaagataatgcaaaaagatgaagaagtgggaaaaattgcat 85
>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence Length = 176395 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 atgtataacctatttctttttc 1016 |||||||||||||||||||||| Sbjct: 8760 atgtataacctatttctttttc 8781
>gb|AC153900.8| Mus musculus 6 BAC RP23-36I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194216 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 988 agctatgatgtataacctatttcttt 1013 ||||||||| |||||||||||||||| Sbjct: 191393 agctatgatctataacctatttcttt 191368
>gb|AC126044.4| Mus musculus BAC clone RP23-12O8 from chromosome 1, complete sequence Length = 213412 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 526 agtcccagaggacgaggcagag 547 |||||||||||||||||||||| Sbjct: 125865 agtcccagaggacgaggcagag 125886
>gb|AC164556.2| Mus musculus BAC clone RP23-334L9 from chromosome 12, complete sequence Length = 182308 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 gaggtcgaggaagagggcgagggcgg 570 |||| ||||||||||||||||||||| Sbjct: 42852 gagggcgaggaagagggcgagggcgg 42877
>dbj|AK165377.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430204N15 product:hypothetical protein, full insert sequence Length = 2528 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 caacaagaacgagaaaagaaaa 77 |||||||||||||||||||||| Sbjct: 2039 caacaagaacgagaaaagaaaa 2018
>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206705 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 988 agctatgatgtataacctatttcttt 1013 ||||||||| |||||||||||||||| Sbjct: 141335 agctatgatctataacctatttcttt 141360
>gb|AC007809.8|AC007809 Drosophila melanogaster, chromosome 3R, region 88C-88C, BAC clone BACR45M03, complete sequence Length = 183439 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 995 atgtataacctatttctttttc 1016 |||||||||||||||||||||| Sbjct: 36593 atgtataacctatttctttttc 36572
>emb|AL953845.10| Mouse DNA sequence from clone RP23-395N24 on chromosome 4, complete sequence Length = 21160 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 caacaagaacgagaaaagaaaa 77 |||||||||||||||||||||| Sbjct: 6469 caacaagaacgagaaaagaaaa 6490
>emb|AM294465.1| Drosophila melanogaster CG12909 gene, strain ZBMEL398 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294464.1| Drosophila melanogaster CG12909 gene, strain ZBMEL384 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294463.1| Drosophila melanogaster CG12909 gene, strain ZBMEL377 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294462.1| Drosophila melanogaster CG12909 gene, strain ZBMEL229 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294461.1| Drosophila melanogaster CG12909 gene, strain ZBMEL191 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294460.1| Drosophila melanogaster CG12909 gene, strain ZBMEL186 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294459.1| Drosophila melanogaster CG12909 gene, strain ZBMEL157 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294457.1| Drosophila melanogaster CG12909 gene, strain ZBMEL131 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294456.1| Drosophila melanogaster CG12909 gene, strain ZBMEL95 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>emb|AM294454.1| Drosophila melanogaster CG12909 gene, strain ZBMEL82 Length = 846 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 524 aggcagaggtcgaggaagagg 544
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 caacaagaacgagaaaagaaa 76 ||||||||||||||||||||| Sbjct: 8415759 caacaagaacgagaaaagaaa 8415779
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 6198263 aggcagaggtcgaggaagagg 6198283
>gb|DQ533170.1| Cepola macrophthalma 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 585 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 529 aagaggtacagctcttttgac 549
>ref|XM_991753.1| PREDICTED: Mus musculus RNA binding motif protein 27, transcript variant 1 (Rbm27), mRNA Length = 6141 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 2742 gaggaagaggcaggggtcgaggaagaggg 2770
>ref|XM_991799.1| PREDICTED: Mus musculus RNA binding motif protein 27, transcript variant 2 (Rbm27), mRNA Length = 6438 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 3039 gaggaagaggcaggggtcgaggaagaggg 3067
>ref|XM_976394.1| PREDICTED: Mus musculus RNA binding motif protein 27, transcript variant 6 (Rbm27), mRNA Length = 6141 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 2742 gaggaagaggcaggggtcgaggaagaggg 2770
>ref|XM_922797.2| PREDICTED: Mus musculus RNA binding motif protein 27, transcript variant 5 (Rbm27), mRNA Length = 6438 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 3039 gaggaagaggcaggggtcgaggaagaggg 3067
>ref|XM_994092.1| PREDICTED: Mus musculus RNA binding motif protein 27, transcript variant 2 (Rbm27), mRNA Length = 6141 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 2742 gaggaagaggcaggggtcgaggaagaggg 2770
>ref|XM_128924.8| PREDICTED: Mus musculus RNA binding motif protein 27, transcript variant 1 (Rbm27), mRNA Length = 6438 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 3039 gaggaagaggcaggggtcgaggaagaggg 3067
>ref|XM_966735.1| PREDICTED: Tribolium castaneum similar to CG10263-PC, isoform C (LOC660508), mRNA Length = 1080 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 538 cgaggcagaggtcgaggaagagggcgagg 566 |||||||||||||| |||||||| ||||| Sbjct: 49 cgaggcagaggtcggggaagaggccgagg 77
>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE Length = 210708 Score = 42.1 bits (21), Expect = 4.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 184 atgcaagcagatgaggatgttggcaaaattgcattggctgtgcct 228 |||||||| ||||| ||| | || || |||||||||||||||||| Sbjct: 98604 atgcaagctgatgaagatatagggaagattgcattggctgtgcct 98560
>gb|BC106261.1| Xenopus laevis MGC78968 protein, mRNA (cDNA clone MGC:130717 IMAGE:7768368), complete cds Length = 1049 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 538 cgaggcagaggtcgaggaagagggcgagg 566 ||||||||||| ||||||||||| ||||| Sbjct: 412 cgaggcagaggccgaggaagaggtcgagg 440
>gb|BC042631.1| Mus musculus RNA binding motif protein 27, mRNA (cDNA clone IMAGE:5035208), with apparent retained intron Length = 3517 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 56 gaggaagaggcaggggtcgaggaagaggg 84
>gb|BC054080.1| Mus musculus RNA binding motif protein 27, mRNA (cDNA clone MGC:56960 IMAGE:6390990), complete cds Length = 5703 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 2190 gaggaagaggcaggggtcgaggaagaggg 2218
>gb|AY249238.1| Chrysospalax trevelyani SP6051 12S ribosomal RNA gene, complete sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, complete sequence; mitochondrial genes for mitochondrial products Length = 2587 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1457 aagaggtacagctcttttgac 1477
>gb|AC125110.4| Mus musculus BAC clone RP24-235E14 from chromosome 18, complete sequence Length = 187634 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 88494 gaggaagaggcaggggtcgaggaagaggg 88522
>gb|AC121965.3| Mus musculus BAC clone RP24-262G23 from chromosome 12, complete sequence Length = 170835 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1001 aacctatttctttttcccaataatt 1025 |||| |||||||||||||||||||| Sbjct: 148217 aaccaatttctttttcccaataatt 148241
>ref|NM_175984.1| Drosophila melanogaster A kinase anchor protein 200 CG13388-RD, transcript variant D (Akap200), mRNA Length = 3358 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 caacaagaacgagaaaagaaa 76 ||||||||||||||||||||| Sbjct: 70 caacaagaacgagaaaagaaa 90
>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1 of 11 of the complete sequence Length = 250029 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1019 aataattggttcttagttgcc 1039 ||||||||||||||||||||| Sbjct: 102335 aataattggttcttagttgcc 102355
>ref|NM_136729.2| Drosophila melanogaster CG12909-RA (CG12909), mRNA Length = 1022 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 635 aggcagaggtcgaggaagagg 655
>ref|NM_058112.3| Drosophila melanogaster A kinase anchor protein 200 CG13388-RA, transcript variant A (Akap200), mRNA Length = 3113 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 caacaagaacgagaaaagaaa 76 ||||||||||||||||||||| Sbjct: 70 caacaagaacgagaaaagaaa 90
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 cggcatcgaacccgacgaggt 114 ||||||||||||||||||||| Sbjct: 2705883 cggcatcgaacccgacgaggt 2705863
>dbj|AK087759.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330016H10 product:weakly similar to CTCL TUMOR ANTIGEN SE70-2 (CUTANEOUS T-CELL LYMPHOMA TUMOR ANTIGEN SE70-2) [Homo sapiens], full insert sequence Length = 3826 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 454 gaggaagaggcaggggtcgaggaagaggg 482
>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete sequence Length = 98432 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 aaattttcaaatggaagtgacccagagaa 479 |||||||||||||| | |||||||||||| Sbjct: 6306 aaattttcaaatggtattgacccagagaa 6334
>emb|CR695097.2|CNS0FZAD Tetraodon nigroviridis full-length cDNA Length = 1244 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 722 cggaggctccatcagctgcgacgccagct 750 |||||||||| ||||| |||||||||||| Sbjct: 810 cggaggctccttcagccgcgacgccagct 838
>emb|CR690024.3|CNS0FVDG Tetraodon nigroviridis full-length cDNA Length = 865 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 722 cggaggctccatcagctgcgacgccagct 750 |||||||||| ||||| |||||||||||| Sbjct: 438 cggaggctccttcagccgcgacgccagct 466
>gb|AY075116.1| Dugong dugon mitochondrion, complete genome Length = 16847 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1530 aagaggtacagctcttttgac 1550
>emb|CR640816.2|CNS0ETFA Tetraodon nigroviridis full-length cDNA Length = 1078 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 722 cggaggctccatcagctgcgacgccagct 750 |||||||||| ||||| |||||||||||| Sbjct: 643 cggaggctccttcagccgcgacgccagct 671
>emb|CR639960.2|CNS0ESRI Tetraodon nigroviridis full-length cDNA Length = 1079 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 722 cggaggctccatcagctgcgacgccagct 750 |||||||||| ||||| |||||||||||| Sbjct: 644 cggaggctccttcagccgcgacgccagct 672
>emb|AL731537.8| Human DNA sequence from clone RP11-96B5 on chromosome 10 Contains a novel pseudogene, the 5' end of the PRKG1 gene for protein kinase cGMP-dependent type I, a novel gene and two CpG islands, complete sequence Length = 189082 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 cccagaagaaggaaattttca 459 ||||||||||||||||||||| Sbjct: 121590 cccagaagaaggaaattttca 121610
>emb|AL607023.3| Human DNA sequence from clone RP11-65E10 on chromosome 10 Contains part of the gene for alpha-catenin-like protein (MGC26194) (VR22), complete sequence Length = 132396 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 941 ttctcctggtgttgtacattg 961 ||||||||||||||||||||| Sbjct: 18623 ttctcctggtgttgtacattg 18643
>gb|AY070557.1| Drosophila melanogaster LD31988 full length cDNA Length = 1052 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 616 aggcagaggtcgaggaagagg 636
>ref|XM_691920.1| PREDICTED: Danio rerio similar to Grb10 interacting GYF protein 1 (LOC568584), mRNA Length = 1284 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 ggcagaggtcgaggaagaggg 561 ||||||||||||||||||||| Sbjct: 391 ggcagaggtcgaggaagaggg 411
>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the SLC10A2 gene for solute carrier family 10 (sodium/bile acid cotransporter family, member 2, complete sequence Length = 171132 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1019 aataattggttcttagttgcc 1039 ||||||||||||||||||||| Sbjct: 83512 aataattggttcttagttgcc 83532
>emb|Y18475.1|OAY18475 Orycteropus afer complete mitochondrial genome Length = 16816 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1535 aagaggtacagctcttttgac 1555
>gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone BACR48F07, complete sequence Length = 175681 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aggcagaggtcgaggaagagg 560 ||||||||||||||||||||| Sbjct: 111408 aggcagaggtcgaggaagagg 111428
>dbj|AP007286.1| Lotus japonicus genomic DNA, clone:LjT12M13, TM0054a, complete sequence Length = 21407 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 ttacccagaagaaggaaattt 456 ||||||||||||||||||||| Sbjct: 3987 ttacccagaagaaggaaattt 4007
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 caacaagaacgagaaaagaaa 76 ||||||||||||||||||||| Sbjct: 37930 caacaagaacgagaaaagaaa 37950
>gb|BC059854.1| Mus musculus RNA binding motif protein 27, mRNA (cDNA clone IMAGE:6406130) Length = 3709 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 292 gaggaagaggcaggggtcgaggaagaggg 320
>emb|AJ421723.1|DDU421723 Dugong dugon complete mitochondrial genome Length = 16850 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1531 aagaggtacagctcttttgac 1551
>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the 3' end of the Vdac1 gene for voltage-dependent anion channel 1, a novel gene (9530068E07Rik), a ubiquinol-cytochrome c reductase subunit (Uqcr) pseudogene, a novel pseudogene, a ribosomal protein S28 (Rps28) pseudogene and a CpG island, complete sequence Length = 165536 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 538 cgaggcagaggtcgaggaagagggcgagg 566 ||||||||||| |||| |||||||||||| Sbjct: 109327 cgaggcagagggcgagtaagagggcgagg 109355
>emb|CR392013.8| Zebrafish DNA sequence from clone DKEY-170H15 in linkage group 5, complete sequence Length = 187191 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 532 agaggacgaggcagaggtcgaggaagagg 560 ||||||||||| |||||| |||||||||| Sbjct: 5415 agaggacgaggaagaggtagaggaagagg 5443
>emb|CR354380.7| Zebrafish DNA sequence from clone CH211-182L2 in linkage group 1, complete sequence Length = 165344 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1000 taacctatttctttttcccaa 1020 ||||||||||||||||||||| Sbjct: 47256 taacctatttctttttcccaa 47236
>gb|AY011141.1| Orycteropus afer 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 816 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 439 aagaggtacagctcttttgac 459
>gb|AY011137.1| Trichechus manatus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 810 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 433 aagaggtacagctcttttgac 453
>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1, complete sequence Length = 215007 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1000 taacctatttctttttcccaa 1020 ||||||||||||||||||||| Sbjct: 182432 taacctatttctttttcccaa 182452
>gb|AC069553.6|AC069553 Genomic Sequence For Arabidopsis thaliana Clone F18A12 From Chromosome V, complete sequence Length = 133529 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 aaattttcaaatggaagtgacccagagaa 479 |||||||||||||| | |||||||||||| Sbjct: 85751 aaattttcaaatggtattgacccagagaa 85779
>gb|AF179291.1|AF179291 Dugong dugon tRNA-Val gene, partial sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes encoding mitochondrial RNAs Length = 1634 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 505 aagaggtacagctcttttgac 525
>dbj|AB046440.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F5K15 Length = 96684 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 aaattttcaaatggaagtgacccagagaa 479 |||||||||||||| | |||||||||||| Sbjct: 95126 aaattttcaaatggtattgacccagagaa 95154
>dbj|AK129330.1| Mus musculus mRNA for mKIAA1311 protein Length = 5164 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 1883 gaggaagaggcaggggtcgaggaagaggg 1911
>gb|AY461716.1| Mus musculus peri implantation stem cell 1 mRNA, complete cds Length = 3512 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagaggg 561 ||||| ||||||| ||||||||||||||| Sbjct: 2849 gaggaagaggcaggggtcgaggaagaggg 2877
>gb|U97337.2|TMU97337 Trichechus manatus tRNA-Val and 16S ribosomal RNA genes, mitochondrial genes encoding mitochondrial RNAs, complete sequence Length = 1636 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 504 aagaggtacagctcttttgac 524
>dbj|AB096866.1| Chrysochloris asiatica mitochondrial DNA, complete genome Length = 16652 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1527 aagaggtacagctcttttgac 1547
>dbj|AB096865.1| Procavia capensis mitochondrial DNA, complete genome Length = 16743 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1534 aagaggtacagctcttttgac 1554
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 42.1 bits (21), Expect = 4.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 533 gaggacgaggcagaggtcgaggaagagggcgagggcg 569 |||||||||| |||| |||||| ||||||||||||| Sbjct: 22721 gaggacgaggacgaggacgaggacgagggcgagggcg 22757
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 caacaagaacgagaaaagaaa 76 ||||||||||||||||||||| Sbjct: 36433 caacaagaacgagaaaagaaa 36453
>gb|U97338.1|OAU97338 Orycteropus afer 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA genes, mitochondrial genes encoding mitochondrial RNAs, complete sequence Length = 2601 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aagaggtacagctcttttgac 366 ||||||||||||||||||||| Sbjct: 1468 aagaggtacagctcttttgac 1488 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 209,518,848 Number of extensions: 12351194 Number of successful extensions: 242109 Number of sequences better than 10.0: 108 Number of HSP's gapped: 242092 Number of HSP's successfully gapped: 142 Length of query: 1058 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1035 Effective length of database: 18,503,978,556 Effective search space: 19151617805460 Effective search space used: 19151617805460 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
