ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf20l18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0627300:Os04g0627300 | 108 | 5e-24 | 2 | AK063026:Os07g0524000 | 36 | 0.031 | 3 | AK105693: | 32 | 0.34 | 4 | AK119512:Os04g0683700 | 32 | 0.34 | 5 | Os07g0609700:Os07g0609700 | 30 | 1.7 | 6 | AK119493:Os01g0105700 | 30 | 1.7 | 7 | AK106535:Os07g0167000 | 29 | 2.9 | 8 | AK102119:Os07g0167000 | 29 | 2.9 | 9 | Os06g0638000:Os06g0638000 | 29 | 3.8 | 10 | AK072848:Os02g0276900 | 29 | 3.8 | 11 | Os06g0486300:Os06g0486300 | 28 | 4.9 | 12 | AK065732:Os01g0230200 | 28 | 4.9 | 13 | Os05g0501200:Os05g0501200 | 28 | 6.4 | 14 | Os01g0784900:Os01g0784900 | 28 | 6.4 | 15 | AK121917:Os05g0228400 | 28 | 6.4 | 16 | AK100786:Os05g0228400 | 28 | 6.4 | 17 | Os05g0188700:Os05g0188700 | 28 | 8.4 | 18 | AK110318: | 28 | 8.4 |
|---|
>Os04g0627300:Os04g0627300 | Length = 183 Score = 108 bits (269), Expect = 5e-24 Identities = 56/92 (60%), Positives = 74/92 (80%), Gaps = 1/92 (1%) Frame = +2 Query: 368 TACSSAARPKVTS-MHDMFMKSIVNMDTKEMNTAQLAKYFLDAAGSRQQATGAVQEVISG 544 TACSSAA PK+TS ++++ MKS+ M+ K++N QLAKYF+DA+ SRQ A +QE +S Sbjct: 93 TACSSAAAPKLTSNLNNVDMKSMATMEAKDINITQLAKYFVDAS-SRQPAAEVLQETVSV 151 Query: 545 GNSNEKQLHEFNDLRKKGLCLVPLSMLIDYLG 640 N+N+K L+E N+LRKKGLCLVPLSMLI+YLG Sbjct: 152 DNNNDKSLYECNELRKKGLCLVPLSMLINYLG 183
>AK063026:Os07g0524000 | Length = 212 Score = 35.8 bits (81), Expect = 0.031 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Frame = +2 Query: 368 TACSSAARPKVTSMHDMFMKSIVNMDTKEMNTAQLAKYFL---DAAGSRQQATGAVQEVI 538 TA S PKV+++ + + + NT L K D A+ E + Sbjct: 124 TASSPVNSPKVSALTQLELSP-----KRRCNTRDLTKEVGIGDDRGREGMDYADAMVEGV 178 Query: 539 SGGNSNEKQLHEFNDLRKKGLCLVPLSMLIDYLG 640 + ++K + +L+ KGLCL PLSML+ Y G Sbjct: 179 RFVDQSQKSVTPCGELKDKGLCLFPLSMLLHYHG 212
>AK105693: | Length = 518 Score = 32.3 bits (72), Expect = 0.34 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 4 SIQNTRPAYRLIITAASLLLLPVSHTHG 87 S+QN R YRL A++++LP+ H HG Sbjct: 189 SVQNIRAVYRLTEADATVIVLPLFHVHG 216
>AK119512:Os04g0683700 | Length = 518 Score = 32.3 bits (72), Expect = 0.34 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 4 SIQNTRPAYRLIITAASLLLLPVSHTHG 87 S+QN R YRL A++++LP+ H HG Sbjct: 189 SVQNIRAVYRLTEADATVIVLPLFHVHG 216
>Os07g0609700:Os07g0609700 | Length = 625 Score = 30.0 bits (66), Expect = 1.7 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Frame = +1 Query: 46 AASLLLLPVSHTHGEHNIATIFM---HQPASV--GGVVHVGRREQLGDALCKLRGINRQQ 210 A L + V T G + ++ + H P V GG V GRR G+A LR +RQ+ Sbjct: 152 AVGLTAVDVGTTGGLATVGSLLLNPHHVPREVRPGGQVRRGRRLHAGEARAPLRKHHRQR 211 Query: 211 TG----DGSSRRR 237 G G +RRR Sbjct: 212 GGGRGRGGCNRRR 224
>AK119493:Os01g0105700 | Length = 388 Score = 30.0 bits (66), Expect = 1.7 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +2 Query: 479 YFLDAAGSRQQATGAVQEVISGGNSNEKQLHEFNDLRKKGLCLVPLS 619 Y + S++ A A Q+ G SN DLR +GLCLVPLS Sbjct: 323 YLRSSKNSKKLACRAAQQQRKG-TSNGGDAAAKLDLRSRGLCLVPLS 368
>AK106535:Os07g0167000 | Length = 397 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/38 (36%), Positives = 26/38 (68%) Frame = +2 Query: 404 SMHDMFMKSIVNMDTKEMNTAQLAKYFLDAAGSRQQAT 517 ++H+ F++S+ N++ M T+ LAK ++ A + QQAT Sbjct: 362 NIHEQFIESLKNLN---MRTSMLAKNIVEPAQAMQQAT 396
>AK102119:Os07g0167000 | Length = 415 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/38 (36%), Positives = 26/38 (68%) Frame = +2 Query: 404 SMHDMFMKSIVNMDTKEMNTAQLAKYFLDAAGSRQQAT 517 ++H+ F++S+ N++ M T+ LAK ++ A + QQAT Sbjct: 380 NIHEQFIESLKNLN---MRTSMLAKNIVEPAQAMQQAT 414
>Os06g0638000:Os06g0638000 | Length = 2068 Score = 28.9 bits (63), Expect = 3.8 Identities = 9/23 (39%), Positives = 18/23 (78%) Frame = -3 Query: 311 SRCRSHHPRNQMRKRSQRRNHFQ 243 SRC+ HHP+++++ +S+R + Q Sbjct: 1952 SRCKLHHPKSKVKSKSRRPDFLQ 1974
>AK072848:Os02g0276900 | Length = 412 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 581 DLRKKGLCLVPLSMLID 631 DLR +GLCLVP+S +D Sbjct: 373 DLRSRGLCLVPVSCTVD 389
>Os06g0486300:Os06g0486300 | Length = 528 Score = 28.5 bits (62), Expect = 4.9 Identities = 15/57 (26%), Positives = 30/57 (52%) Frame = +1 Query: 22 PAYRLIITAASLLLLPVSHTHGEHNIATIFMHQPASVGGVVHVGRREQLGDALCKLR 192 P + + + A L+L+ V+ HG HN++ F + +++ +GDAL K++ Sbjct: 15 PTWAVAVVCAVLVLVSVAMEHGLHNLSHWFRRR-----------QKKAMGDALDKIK 60
>AK065732:Os01g0230200 | Length = 452 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +2 Query: 548 NSNEKQLHEFNDLRKKGLCLVPLSML 625 + ++Q + +DLR +GLCLVP+S + Sbjct: 391 DGKKQQAKKDDDLRSRGLCLVPVSCM 416
>Os05g0501200:Os05g0501200 | Length = 323 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +2 Query: 545 GNSNEKQLHEFNDLRKKGLCLVPLS 619 GN KQL DLR +GLCLVP++ Sbjct: 280 GNCEGKQL----DLRSRGLCLVPVA 300
>Os01g0784900:Os01g0784900 | Length = 373 Score = 28.1 bits (61), Expect = 6.4 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 524 VQEVISGGNSNEKQLHEFNDLRKKGLCLVPLS 619 + E ++G S + DLR +GLCLVP++ Sbjct: 319 LHEQVAGSESTKDAEQPKPDLRSRGLCLVPVA 350
>AK121917:Os05g0228400 | Length = 276 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 497 GSRQQATGAVQEVISGGNSNEKQLHEFNDLRKKGLCLVPLS 619 G++Q A Q+ G N + K+ DLR +GLCLVP+S Sbjct: 220 GAQQPAAQPEQQ---GANDDGKK-----DLRSRGLCLVPVS 252
>AK100786:Os05g0228400 | Length = 415 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 497 GSRQQATGAVQEVISGGNSNEKQLHEFNDLRKKGLCLVPLS 619 G++Q A Q+ G N + K+ DLR +GLCLVP+S Sbjct: 359 GAQQPAAQPEQQ---GANDDGKK-----DLRSRGLCLVPVS 391
>Os05g0188700:Os05g0188700 | Length = 440 Score = 27.7 bits (60), Expect = 8.4 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -3 Query: 383 RRNKQCPAENHPHRLHP*GPT*GRSRCRSHHPRNQMRKRSQRRNHFQRLL 234 RR Q PA++ H P P R R H R R +RR H R + Sbjct: 385 RRRPQLPAQHPRHPPRPLRPGLRLRRRRRHRRRRDAIVRRRRRGHGHRAM 434
>AK110318: | Length = 940 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +3 Query: 225 IKEEKPLKVISPLASLPHLIPWVMAPTPTPSSRRTS 332 + KP P PH PW PT PSS + S Sbjct: 249 VTASKPATTKKPGPEYPHWQPWPPKPTKKPSSIKAS 284 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,740,226 Number of extensions: 449900 Number of successful extensions: 1454 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1445 Number of HSP's successfully gapped: 18 Length of query: 244 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 146 Effective length of database: 11,475,837 Effective search space: 1675472202 Effective search space used: 1675472202 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
