ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf17n05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF192261.1|AF192261 Hordeum vulgare Rar1 (Rar1) mRNA, complete cds Length = 1054 Score = 1840 bits (928), Expect = 0.0 Identities = 943/948 (99%) Strand = Plus / Plus Query: 98 cgcatcgcgatgtcggcggagacggagaggagcgacgccgcgcccgcgcccgcgcccatg 157 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 82 cgcatcgcgatgtcggcggagacggagaggagcgccgccgcgcccgcgcccgcgcccatg 141 Query: 158 cggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctcc 217 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142 cggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgatggctcc 201 Query: 218 tgccactaccacccctccggacctctgtttcatgatggcatgaaagagtggagctgttgc 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 tgccactaccacccctccggacctctgtttcatgatggcatgaaagagtggagctgttgc 261 Query: 278 aagcaaagaagccatgattttagcttatttttggctattcctggatgtgccacagggaag 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 aagcaaagaagccatgattttagcttatttttggctattcctggatgtgccacagggaag 321 Query: 338 catacaactgagaaaccagtcacaaaagctgtttctcttaactcctcaaaggcaacccca 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 catacaactgagaaaccagtcacaaaagctgtttctcttaactcctcaaaggcaacccca 381 Query: 398 ccaaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaagg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 ccaaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaagg 441 Query: 458 tgccgtcagggtttcttttgttctgaccatggatcacagaccaaggcacaaaaaccagtt 517 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 442 tgccgtcagggtttcttttgttctgaccatggatcacagcccaaggcacaaaaaccagtt 501 Query: 518 gctgtaaatggtacaaatacggaatctgtccagaaatcctcagttccagagcccaagaaa 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 gctgtaaatggtacaaatacggaatctgtccagaaatcctcagttccagagcccaagaaa 561 Query: 578 aaggttgttaatataaatgaacctagggtttgtaagaataaaggatgtggcaaaacgtac 637 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 aaggttgttgatataaatgaacctagggtttgtaagaataaaggatgtggcaaaacgtac 621 Query: 638 aaggagaaggataaccatgatgctgcatgcgattaccatccaggtcctgcagttttccat 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 aaggagaaggataaccatgatgctgcatgcgattaccatccaggtcctgcagttttccat 681 Query: 698 gacagaaatagagggtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatg 757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 gacagaaatagagggtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatg 741 Query: 758 gagatacctccatgcacaaaggggtggcacaatgctgatgctgtgtgagttcgcaccatg 817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gagatacctccatgcacaaaggggtggcacaatgctgatgctgtgtgagttcgcaccatg 801 Query: 818 acctgcattaagatcacggcactcatacagttatttgttgtagtatctcctagtttattt 877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 acctgcattaagatcacggcactcatacagttatttgttgtagtatctcctagtttattt 861 Query: 878 ctggagaactatgcttggaagtgtgacctgatattcaggaatgagcctgcttgagtgtgc 937 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 ctggagaactatgcttggaagtgtgacctgatattcaggaatgagcctgcttgagtgtgc 921 Query: 938 tctgagtaattactgtcgaaatctcatgtggtgtttcatgtaatctggaatcggaacttg 997 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 922 tctgagtaattactgtcgaaatctcatgtggtgtttcatgtaatctgtaatcggaacttg 981 Query: 998 aaaccatatgtggacactgaatttagtaaccgagctttgccatttttc 1045 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 aaaccatatgtggacactgaatttagtaaccgagctttgccatttttc 1029 Score = 121 bits (61), Expect = 5e-24 Identities = 61/61 (100%) Strand = Plus / Plus Query: 19 cgccgaaacagattcgacagctccagcgaagagcgagaggggcacaaggaagaaatcttc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgccgaaacagattcgacagctccagcgaagagcgagaggggcacaaggaagaaatcttc 60 Query: 79 g 79 | Sbjct: 61 g 61
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 658 bits (332), Expect = 0.0 Identities = 335/336 (99%) Strand = Plus / Plus Query: 712 gtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatg 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60161 gtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatg 60220 Query: 772 cacaaaggggtggcacaatgctgatgctgtgtgagttcgcaccatgacctgcattaagat 831 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60221 cacaaaggggtggcacaatgctgatgctgtgtgagttcgcaccatgacctgcattaagat 60280 Query: 832 cacggcactcatacagttatttgttgtagtatctcctagtttatttctggagaactatgc 891 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60281 cacggcactcatacagttatttgttgtagtatctcctagtttatttctggagaactatgc 60340 Query: 892 ttggaagtgtgacctgatattcaggaatgagcctgcttgagtgtgctctgagtaattact 951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60341 ttggaagtgtgacctgatattcaggaatgagcctgcttgagtgtgctctgagtaattact 60400 Query: 952 gtcgaaatctcatgtggtgtttcatgtaatctggaatcggaacttgaaaccatatgtgga 1011 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 60401 gtcgaaatctcatgtggtgtttcatgtaatctgtaatcggaacttgaaaccatatgtgga 60460 Query: 1012 cactgaatttagtaaccgagctttgccatttttcaa 1047 |||||||||||||||||||||||||||||||||||| Sbjct: 60461 cactgaatttagtaaccgagctttgccatttttcaa 60496 Score = 430 bits (217), Expect = e-117 Identities = 223/225 (99%) Strand = Plus / Plus Query: 488 ggatcacagaccaaggcacaaaaaccagttgctgtaaatggtacaaatacggaatctgtc 547 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59852 ggatcacagcccaaggcacaaaaaccagttgctgtaaatggtacaaatacggaatctgtc 59911 Query: 548 cagaaatcctcagttccagagcccaagaaaaaggttgttaatataaatgaacctagggtt 607 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 59912 cagaaatcctcagttccagagcccaagaaaaaggttgttgatataaatgaacctagggtt 59971 Query: 608 tgtaagaataaaggatgtggcaaaacgtacaaggagaaggataaccatgatgctgcatgc 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59972 tgtaagaataaaggatgtggcaaaacgtacaaggagaaggataaccatgatgctgcatgc 60031 Query: 668 gattaccatccaggtcctgcagttttccatgacagaaatagaggg 712 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60032 gattaccatccaggtcctgcagttttccatgacagaaatagaggg 60076 Score = 335 bits (169), Expect = 2e-88 Identities = 169/169 (100%) Strand = Plus / Plus Query: 321 gatgtgccacagggaagcatacaactgagaaaccagtcacaaaagctgtttctcttaact 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59571 gatgtgccacagggaagcatacaactgagaaaccagtcacaaaagctgtttctcttaact 59630 Query: 381 cctcaaaggcaaccccaccaaagtcagctccagtccagtcttctaagcagggtgtggaaa 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59631 cctcaaaggcaaccccaccaaagtcagctccagtccagtcttctaagcagggtgtggaaa 59690 Query: 441 ctgaggcctgctcaaggtgccgtcagggtttcttttgttctgaccatgg 489 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59691 ctgaggcctgctcaaggtgccgtcagggtttcttttgttctgaccatgg 59739 Score = 260 bits (131), Expect = 9e-66 Identities = 137/139 (98%) Strand = Plus / Plus Query: 98 cgcatcgcgatgtcggcggagacggagaggagcgacgccgcgcccgcgcccgcgcccatg 157 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 56685 cgcatcgcgatgtcggcggagacggagaggagcgccgccgcgcccgcgcccgcgcccatg 56744 Query: 158 cggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctcc 217 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 56745 cggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgatggctcc 56804 Query: 218 tgccactaccacccctccg 236 ||||||||||||||||||| Sbjct: 56805 tgccactaccacccctccg 56823 Score = 165 bits (83), Expect = 4e-37 Identities = 83/83 (100%) Strand = Plus / Plus Query: 239 cctctgtttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgatttt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58563 cctctgtttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgatttt 58622 Query: 299 agcttatttttggctattcctgg 321 ||||||||||||||||||||||| Sbjct: 58623 agcttatttttggctattcctgg 58645 Score = 155 bits (78), Expect = 4e-34 Identities = 78/78 (100%) Strand = Plus / Plus Query: 2 gtcgtctttgttccgtgcgccgaaacagattcgacagctccagcgaagagcgagaggggc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56587 gtcgtctttgttccgtgcgccgaaacagattcgacagctccagcgaagagcgagaggggc 56646 Query: 62 acaaggaagaaatcttcg 79 |||||||||||||||||| Sbjct: 56647 acaaggaagaaatcttcg 56664
>emb|CT831964.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117B21, full insert sequence Length = 1086 Score = 258 bits (130), Expect = 4e-65 Identities = 190/210 (90%) Strand = Plus / Plus Query: 157 gcggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctc 216 |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 166 gcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctc 225 Query: 217 ctgccactaccacccctccggacctctgtttcatgatggcatgaaagagtggagctgttg 276 |||||| |||||||||||||||||| |||||||||||||||||||| ||||||| || || Sbjct: 226 ctgccaataccacccctccggacctatgtttcatgatggcatgaaacagtggagttgctg 285 Query: 277 caagcaaagaagccatgattttagcttatttttggctattcctggatgtgccacagggaa 336 ||||||| |||||||||||||||| ||||||||||||||||||| || || || || Sbjct: 286 taagcaaaaaagccatgattttagcctatttttggctattcctgggtgcaaaactggaaa 345 Query: 337 gcatacaactgagaaaccagtcacaaaagc 366 ||| ||||||||||||||| |||||||||| Sbjct: 346 gcacacaactgagaaaccaatcacaaaagc 375 Score = 242 bits (122), Expect = 2e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 593 aatgaacctagggtttgtaagaataaaggatgtggcaaaacgtacaaggagaaggataac 652 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 584 aatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataat 643 Query: 653 catgatgctgcatgcgattaccatccaggtcctgcagttttccatgacagaaatagaggg 712 ||||||| |||||||||||||||||||| ||||||||||| | ||||| | ||||||| Sbjct: 644 catgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggg 703 Query: 713 tggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatgc 772 ||||| ||||||||| | ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 704 tggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgc 763 Query: 773 acaaaggggtggcacaatgctgatgc 798 |||||||| ||||||||||||||||| Sbjct: 764 acaaagggttggcacaatgctgatgc 789 Score = 111 bits (56), Expect = 5e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 399 caaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaaggt 458 ||||| ||| |||||||||| |||| |||||| |||||| | |||| | |||||||||| Sbjct: 393 caaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggt 452 Query: 459 gccgtcagggtttcttttgttctgaccatggatcacagaccaaggcacaaaaacca 514 ||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 453 gccgtcaaggtttcttttgctctgaccatggatcacaacccaaggcacaaatacca 508
>dbj|AK111881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050A01, full insert sequence Length = 1125 Score = 258 bits (130), Expect = 4e-65 Identities = 190/210 (90%) Strand = Plus / Plus Query: 157 gcggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctc 216 |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 156 gcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctc 215 Query: 217 ctgccactaccacccctccggacctctgtttcatgatggcatgaaagagtggagctgttg 276 |||||| |||||||||||||||||| |||||||||||||||||||| ||||||| || || Sbjct: 216 ctgccaataccacccctccggacctatgtttcatgatggcatgaaacagtggagttgctg 275 Query: 277 caagcaaagaagccatgattttagcttatttttggctattcctggatgtgccacagggaa 336 ||||||| |||||||||||||||| ||||||||||||||||||| || || || || Sbjct: 276 taagcaaaaaagccatgattttagcctatttttggctattcctgggtgcaaaactggaaa 335 Query: 337 gcatacaactgagaaaccagtcacaaaagc 366 ||| ||||||||||||||| |||||||||| Sbjct: 336 gcacacaactgagaaaccaatcacaaaagc 365 Score = 238 bits (120), Expect = 3e-59 Identities = 180/200 (90%) Strand = Plus / Plus Query: 599 cctagggtttgtaagaataaaggatgtggcaaaacgtacaaggagaaggataaccatgat 658 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 580 cctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataatcatgat 639 Query: 659 gctgcatgcgattaccatccaggtcctgcagttttccatgacagaaatagagggtggaag 718 | |||||||||||||||||||| ||||||||||| | ||||| | |||||||||||| Sbjct: 640 gaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagagggtggaaa 699 Query: 719 tgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatgcacaaag 778 ||||||||| | ||||||||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct: 700 tgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgcacaaag 759 Query: 779 gggtggcacaatgctgatgc 798 || ||||||||||||||||| Sbjct: 760 ggttggcacaatgctgatgc 779 Score = 111 bits (56), Expect = 5e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 399 caaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaaggt 458 ||||| ||| |||||||||| |||| |||||| |||||| | |||| | |||||||||| Sbjct: 383 caaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggt 442 Query: 459 gccgtcagggtttcttttgttctgaccatggatcacagaccaaggcacaaaaacca 514 ||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 443 gccgtcaaggtttcttttgctctgaccatggatcacaacccaaggcacaaatacca 498
>ref|NM_001053574.1| Oryza sativa (japonica cultivar-group) Os02g0535400 (Os02g0535400) mRNA, partial cds Length = 1125 Score = 244 bits (123), Expect = 5e-61 Identities = 190/211 (90%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 157 gcggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctc 216 |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 155 gcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctc 214 Query: 217 ctgccactaccacccctccg-gacctctgtttcatgatggcatgaaagagtggagctgtt 275 |||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||| || | Sbjct: 215 ctgccaataccacccctccgtgacctatgtttcatgatggcatgaaacagtggagttgct 274 Query: 276 gcaagcaaagaagccatgattttagcttatttttggctattcctggatgtgccacaggga 335 | ||||||| |||||||||||||||| ||||||||||||||||||| || || || | Sbjct: 275 gtaagcaaaaaagccatgattttagcctatttttggctattcctgggtgcaaaactggaa 334 Query: 336 agcatacaactgagaaaccagtcacaaaagc 366 |||| ||||||||||||||| |||||||||| Sbjct: 335 agcacacaactgagaaaccaatcacaaaagc 365 Score = 242 bits (122), Expect = 2e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 593 aatgaacctagggtttgtaagaataaaggatgtggcaaaacgtacaaggagaaggataac 652 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 574 aatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataat 633 Query: 653 catgatgctgcatgcgattaccatccaggtcctgcagttttccatgacagaaatagaggg 712 ||||||| |||||||||||||||||||| ||||||||||| | ||||| | ||||||| Sbjct: 634 catgatgaagcatgcgattaccatccaggacctgcagtttttcgcgacaggattagaggg 693 Query: 713 tggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatgc 772 ||||| ||||||||| | ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 694 tggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtgc 753 Query: 773 acaaaggggtggcacaatgctgatgc 798 |||||||| ||||||||||||||||| Sbjct: 754 acaaagggttggcacaatgctgatgc 779 Score = 111 bits (56), Expect = 5e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 399 caaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaaggt 458 ||||| ||| |||||||||| |||| |||||| |||||| | |||| | |||||||||| Sbjct: 383 caaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggt 442 Query: 459 gccgtcagggtttcttttgttctgaccatggatcacagaccaaggcacaaaaacca 514 ||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 443 gccgtcaaggtttcttttgctctgaccatggatcacaacccaaggcacaaatacca 498
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 137 bits (69), Expect = 9e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 593 aatgaacctagggtttgtaagaataaaggatgtggcaaaacgtacaaggagaaggataac 652 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 19747156 aatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataat 19747097 Query: 653 catgatgctgcatgcgattaccatccaggtcctgcagtttt 693 ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 19747096 catgatgaagcatgcgattaccatccaggacctgcagtttt 19747056 Score = 127 bits (64), Expect = 9e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 157 gcggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctc 216 |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 19749126 gcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctc 19749067 Query: 217 ctgccactaccacccctccg 236 |||||| ||||||||||||| Sbjct: 19749066 ctgccaataccacccctccg 19749047 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 712 gtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatg 771 |||||| ||||||||| | ||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 19746946 gtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtg 19746887 Query: 772 cacaaaggggtggcacaatgctgatgc 798 ||||||||| ||||||||||||||||| Sbjct: 19746886 cacaaagggttggcacaatgctgatgc 19746860 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 243 tgtttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagct 302 |||||||||||||||||||| ||||||| || || ||||||| |||||||||||||||| Sbjct: 19747823 tgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcc 19747764 Query: 303 tatttttggctattcctgg 321 ||||||||||||||||||| Sbjct: 19747763 tatttttggctattcctgg 19747745 Score = 85.7 bits (43), Expect = 3e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 399 caaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaaggt 458 ||||| ||| |||||||||| |||| |||||| |||||| | |||| | |||||||||| Sbjct: 19747523 caaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggt 19747464 Query: 459 gccgtcagggtttcttttgttctgaccatgg 489 ||||||| ||||||||||| ||||||||||| Sbjct: 19747463 gccgtcaaggtttcttttgctctgaccatgg 19747433 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Minus Query: 335 aagcatacaactgagaaaccagtcacaaaagc 366 ||||| ||||||||||||||| |||||||||| Sbjct: 19747572 aagcacacaactgagaaaccaatcacaaaagc 19747541 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 35408862 cgccgcgcccgcgcccgcgcc 35408842
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 137 bits (69), Expect = 9e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 593 aatgaacctagggtttgtaagaataaaggatgtggcaaaacgtacaaggagaaggataac 652 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 103914 aatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataat 103855 Query: 653 catgatgctgcatgcgattaccatccaggtcctgcagtttt 693 ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 103854 catgatgaagcatgcgattaccatccaggacctgcagtttt 103814 Score = 127 bits (64), Expect = 9e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 157 gcggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctc 216 |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 105884 gcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctc 105825 Query: 217 ctgccactaccacccctccg 236 |||||| ||||||||||||| Sbjct: 105824 ctgccaataccacccctccg 105805 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 712 gtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatg 771 |||||| ||||||||| | ||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 103704 gtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtg 103645 Query: 772 cacaaaggggtggcacaatgctgatgc 798 ||||||||| ||||||||||||||||| Sbjct: 103644 cacaaagggttggcacaatgctgatgc 103618 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 243 tgtttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagct 302 |||||||||||||||||||| ||||||| || || ||||||| |||||||||||||||| Sbjct: 104581 tgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcc 104522 Query: 303 tatttttggctattcctgg 321 ||||||||||||||||||| Sbjct: 104521 tatttttggctattcctgg 104503 Score = 85.7 bits (43), Expect = 3e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 399 caaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaaggt 458 ||||| ||| |||||||||| |||| |||||| |||||| | |||| | |||||||||| Sbjct: 104281 caaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggt 104222 Query: 459 gccgtcagggtttcttttgttctgaccatgg 489 ||||||| ||||||||||| ||||||||||| Sbjct: 104221 gccgtcaaggtttcttttgctctgaccatgg 104191 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Minus Query: 335 aagcatacaactgagaaaccagtcacaaaagc 366 ||||| ||||||||||||||| |||||||||| Sbjct: 104330 aagcacacaactgagaaaccaatcacaaaagc 104299
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 137 bits (69), Expect = 9e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 593 aatgaacctagggtttgtaagaataaaggatgtggcaaaacgtacaaggagaaggataac 652 ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 55707 aatgagcctagggtttgtaagaacaaaggatgtggtaaaacctacaaggagaaggataat 55648 Query: 653 catgatgctgcatgcgattaccatccaggtcctgcagtttt 693 ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 55647 catgatgaagcatgcgattaccatccaggacctgcagtttt 55607 Score = 127 bits (64), Expect = 9e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 157 gcggtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctc 216 |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 57677 gcggtgccagcggataggctgcgacgccacgttcaccgacgacaacaaccccgacggctc 57618 Query: 217 ctgccactaccacccctccg 236 |||||| ||||||||||||| Sbjct: 57617 ctgccaataccacccctccg 57598 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 712 gtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatg 771 |||||| ||||||||| | ||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 55497 gtggaaatgttgtgatattcatgtcaaggaatttgatgaatttatggagatccctccgtg 55438 Query: 772 cacaaaggggtggcacaatgctgatgc 798 ||||||||| ||||||||||||||||| Sbjct: 55437 cacaaagggttggcacaatgctgatgc 55411 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 243 tgtttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagct 302 |||||||||||||||||||| ||||||| || || ||||||| |||||||||||||||| Sbjct: 56374 tgtttcatgatggcatgaaacagtggagttgctgtaagcaaaaaagccatgattttagcc 56315 Query: 303 tatttttggctattcctgg 321 ||||||||||||||||||| Sbjct: 56314 tatttttggctattcctgg 56296 Score = 85.7 bits (43), Expect = 3e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 399 caaagtcagctccagtccagtcttctaagcagggtgtggaaactgaggcctgctcaaggt 458 ||||| ||| |||||||||| |||| |||||| |||||| | |||| | |||||||||| Sbjct: 56074 caaaggcagttccagtccagacttcgaagcagagtgtgggagctgacacttgctcaaggt 56015 Query: 459 gccgtcagggtttcttttgttctgaccatgg 489 ||||||| ||||||||||| ||||||||||| Sbjct: 56014 gccgtcaaggtttcttttgctctgaccatgg 55984 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Minus Query: 335 aagcatacaactgagaaaccagtcacaaaagc 366 ||||| ||||||||||||||| |||||||||| Sbjct: 56123 aagcacacaactgagaaaccaatcacaaaagc 56092
>gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete sequence Length = 114831 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Minus Query: 245 tttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagctta 304 ||||||||||| |||||||| ||||| || |||||| ||||||||||||||||||||||| Sbjct: 26349 tttcatgatggtatgaaagaatggagttgctgcaagaaaagaagccatgattttagctta 26290 Query: 305 tttttgg 311 ||||||| Sbjct: 26289 tttttgg 26283 Score = 73.8 bits (37), Expect = 1e-09 Identities = 73/85 (85%) Strand = Plus / Minus Query: 712 gtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacctccatg 771 |||||||||||||||| | ||||| || || |||||||| |||||| || |||||||| Sbjct: 25140 gtggaagtgttgtgatattcatgtaaaagaatttgacgagtttatgagcattcctccatg 25081 Query: 772 cacaaaggggtggcacaatgctgat 796 ||||||||| ||||| ||||||||| Sbjct: 25080 cacaaagggatggcataatgctgat 25056 Score = 61.9 bits (31), Expect = 4e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 614 aataaaggatgtggcaaaacgtacaaggagaaggataaccatgatgctgcatgcgattac 673 |||||||||||||| |||| | |||||| |||||||||||||| |||| ||| |||| Sbjct: 25332 aataaaggatgtggtcaaaccttcaaggaaaaggataaccatgacactgcttgcagttac 25273 Query: 674 catccaggtcctgcagttttccatgac 700 ||||| || ||||| ||||| |||||| Sbjct: 25272 catcctggccctgctgtttttcatgac 25246
>gb|AY088919.1| Arabidopsis thaliana clone 99615 mRNA, complete sequence Length = 903 Score = 83.8 bits (42), Expect = 1e-12 Identities = 159/198 (80%) Strand = Plus / Plus Query: 160 gtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctcctg 219 |||||| || || |||||| |||||||||||||||| |||||||| || | || || || Sbjct: 95 gtgccaacgtattggctgcaacgccatgttcaccgatgacgacaatcctcaaggttcttg 154 Query: 220 ccactaccacccctccggacctctgtttcatgatggcatgaaagagtggagctgttgcaa 279 || | || | |||||||| | ||||| || || ||||||||||||||||| ||||| Sbjct: 155 tcaatttcatgcttccggaccattttttcacgacggaatgaaagagtggagctgctgcaa 214 Query: 280 gcaaagaagccatgattttagcttatttttggctattcctggatgtgccacagggaagca 339 ||||||||| |||||||| || || || |||| ||||| |||||| ||||| || || Sbjct: 215 gcaaagaagtcatgatttcagtttgttcttggaaattccaggatgtaaaacaggtaaaca 274 Query: 340 tacaactgagaaaccagt 357 ||||||||||||||||| Sbjct: 275 cacaactgagaaaccagt 292 Score = 73.8 bits (37), Expect = 1e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 674 catccaggtcctgcagttttccatgacagaaatagagggtggaagtgttgtgatgtccat 733 |||||||||||||| || ||||| |||||| ||||||||||| ||||| ||||| || Sbjct: 603 catccaggtcctgcggtcttccacgacagactgagagggtggaaatgttgcgatgttcac 662 Query: 734 gtcaaggagtttgacgaatttatggagatacctccatgcac 774 || |||||||| ||||| || ||||| |||||||| ||||| Sbjct: 663 gtgaaggagttcgacgagttcatggaaatacctccttgcac 703
>gb|AF192262.1|AF192262 Arabidopsis thaliana RAR1 (Rar1) mRNA, complete cds Length = 733 Score = 83.8 bits (42), Expect = 1e-12 Identities = 159/198 (80%) Strand = Plus / Plus Query: 160 gtgccagcgcataggctgcgacgccatgttcaccgacgacgacaaccccgacggctcctg 219 |||||| || || |||||| |||||||||||||||| |||||||| || | || || || Sbjct: 85 gtgccaacgtattggctgcaacgccatgttcaccgatgacgacaatcctcaaggttcttg 144 Query: 220 ccactaccacccctccggacctctgtttcatgatggcatgaaagagtggagctgttgcaa 279 || | || | |||||||| | ||||| || || ||||||||||||||||| ||||| Sbjct: 145 tcaatttcatgcttccggaccattttttcacgacggaatgaaagagtggagctgctgcaa 204 Query: 280 gcaaagaagccatgattttagcttatttttggctattcctggatgtgccacagggaagca 339 ||||||||| |||||||| || || || |||| ||||| |||||| ||||| || || Sbjct: 205 gcaaagaagtcatgatttcagtttgttcttggaaattccaggatgtaaaacaggtaaaca 264 Query: 340 tacaactgagaaaccagt 357 ||||||||||||||||| Sbjct: 265 cacaactgagaaaccagt 282 Score = 73.8 bits (37), Expect = 1e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 674 catccaggtcctgcagttttccatgacagaaatagagggtggaagtgttgtgatgtccat 733 |||||||||||||| || ||||| |||||| ||||||||||| ||||| ||||| || Sbjct: 593 catccaggtcctgcggtcttccacgacagactgagagggtggaaatgttgcgatgttcac 652 Query: 734 gtcaaggagtttgacgaatttatggagatacctccatgcac 774 || |||||||| ||||| || ||||| |||||||| ||||| Sbjct: 653 gtgaaggagttcgacgagttcatggaaatacctccttgcac 693
>ref|NM_124549.3| Arabidopsis thaliana PBS2 (PPHB SUSCEPTIBLE 2) (PBS2) mRNA, complete cds Length = 905 Score = 81.8 bits (41), Expect = 5e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 257 atgaaagagtggagctgttgcaagcaaagaagccatgattttagcttatttttggctatt 316 ||||||||||||||||| |||||||||||||| |||||||| || || || |||| ||| Sbjct: 193 atgaaagagtggagctgctgcaagcaaagaagtcatgatttcagtttgttcttggaaatt 252 Query: 317 cctggatgtgccacagggaagcatacaactgagaaaccagt 357 || |||||| ||||| || || ||||||||||||||||| Sbjct: 253 ccaggatgtaaaacaggtaaacacacaactgagaaaccagt 293 Score = 73.8 bits (37), Expect = 1e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 674 catccaggtcctgcagttttccatgacagaaatagagggtggaagtgttgtgatgtccat 733 |||||||||||||| || ||||| |||||| ||||||||||| ||||| ||||| || Sbjct: 604 catccaggtcctgcggtcttccacgacagactgagagggtggaaatgttgcgatgttcac 663 Query: 734 gtcaaggagtttgacgaatttatggagatacctccatgcac 774 || |||||||| ||||| || ||||| |||||||| ||||| Sbjct: 664 gtgaaggagttcgacgagttcatggaaatacctccttgcac 704 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Plus Query: 160 gtgccagcgcataggctgcgacgccatgttcaccgacgacgacaa 204 |||||| || || |||||| |||||||||||||||| |||||||| Sbjct: 95 gtgccaacgtattggctgcaacgccatgttcaccgatgacgacaa 139
>emb|AM286235.1| Platanus x acerifolia partial mRNA for Rar1 protein Length = 635 Score = 71.9 bits (36), Expect = 5e-09 Identities = 144/180 (80%) Strand = Plus / Plus Query: 617 aaaggatgtggcaaaacgtacaaggagaaggataaccatgatgctgcatgcgattaccat 676 ||||||||||| ||||| | || || || |||||||||||| ||||||| ||||||| Sbjct: 213 aaaggatgtggtaaaacctttaaagaaaaagataaccatgatagtgcatgcagttaccat 272 Query: 677 ccaggtcctgcagttttccatgacagaaatagagggtggaagtgttgtgatgtccatgtc 736 || || ||||| ||||||||||||| | | ||||||||| ||||| || | ||||| Sbjct: 273 cctggccctgctattttccatgacaggatgaaagggtggaaatgttgcgacattcatgtg 332 Query: 737 aaggagtttgacgaatttatggagatacctccatgcacaaaggggtggcacaatgctgat 796 ||||| || || || |||||| |||||||| ||||| || |||||||| ||||||||| Sbjct: 333 aaggaattcgatgagtttatgagcatacctccttgcacgaaagggtggcataatgctgat 392
>dbj|AB010074.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIO24 Length = 86212 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 257 atgaaagagtggagctgttgcaagcaaagaagccatgattt 297 ||||||||||||||||| |||||||||||||| |||||||| Sbjct: 6107 atgaaagagtggagctgctgcaagcaaagaagtcatgattt 6067 Score = 50.1 bits (25), Expect = 0.017 Identities = 40/45 (88%) Strand = Plus / Minus Query: 160 gtgccagcgcataggctgcgacgccatgttcaccgacgacgacaa 204 |||||| || || |||||| |||||||||||||||| |||||||| Sbjct: 7014 gtgccaacgtattggctgcaacgccatgttcaccgatgacgacaa 6970
>emb|BX833078.1|CNS0A205 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 830 Score = 65.9 bits (33), Expect = 3e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 674 catccaggtcctgcagttttccatgacagaaatagagggtggaagtgttgtgatgtccat 733 |||||||||||||| || ||||| || ||| ||||||||||| ||||| ||||| || Sbjct: 547 catccaggtcctgcggtcttccacgagagagtgagagggtggaaatgttgcgatgttcac 606 Query: 734 gtcaaggagtttgacgaatttatggagatacctccatgcac 774 || |||||||| ||||| || ||||| |||||||| ||||| Sbjct: 607 gtgaaggagttcgacgagttcatggaaatacctccttgcac 647 Score = 48.1 bits (24), Expect = 0.065 Identities = 30/32 (93%) Strand = Plus / Plus Query: 173 ggctgcgacgccatgttcaccgacgacgacaa 204 |||||| |||||||||||||||| |||||||| Sbjct: 52 ggctgcaacgccatgttcaccgatgacgacaa 83
>gb|AY438026.1| Nicotiana benthamiana RAR1-like protein mRNA, partial cds Length = 496 Score = 58.0 bits (29), Expect = 7e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 245 tttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagctta 304 ||||||||||| ||||| ||||||| ||||||||| |||| || |||||||| || ||| Sbjct: 25 tttcatgatggaatgaagaagtggagttgttgcaagaaaagcagtcatgatttcagttta 84 Query: 305 tttttggctattcctggatgtgccacagggaagcatacaactgagaaaccagt 357 ||| | | |||||||| ||| ||||| ||||| ||||| || |||||||| Sbjct: 85 tttctcgaaattcctgggtgtaagacaggaaagcacacaacagaaaaaccagt 137
>dbj|AK175924.1| Arabidopsis thaliana mRNA for similar to RAR1, partial cds, clone: RAFL22-58-J09 Length = 267 Score = 56.0 bits (28), Expect = 3e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 707 agagggtggaagtgttgtgatgtccatgtcaaggagtttgacgaatttatggagatacct 766 ||||||||||| ||||| ||||| || || |||||||| ||||| || ||||| |||||| Sbjct: 5 agagggtggaaatgttgcgatgttcacgtgaaggagttcgacgagttcatggaaatacct 64 Query: 767 ccatgcac 774 || ||||| Sbjct: 65 ccttgcac 72
>gb|AF480487.1| Nicotiana tabacum Rar1 (Rar1) mRNA, complete cds Length = 666 Score = 54.0 bits (27), Expect = 0.001 Identities = 54/63 (85%) Strand = Plus / Plus Query: 245 tttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagctta 304 ||||||||||| ||||| ||||||| ||||||||| |||| || |||||||| || ||| Sbjct: 100 tttcatgatgggatgaagaagtggagttgttgcaagaaaagcagtcatgatttcagttta 159 Query: 305 ttt 307 ||| Sbjct: 160 ttt 162
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 48.1 bits (24), Expect = 0.065 Identities = 27/28 (96%) Strand = Plus / Minus Query: 405 cagctccagtccagtcttctaagcaggg 432 |||||||||||||||||||| ||||||| Sbjct: 60328 cagctccagtccagtcttctcagcaggg 60301
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||||| Sbjct: 4741885 cgccgcgcccgcgcccgcgccca 4741863 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 1282713 gccgcgcccgcgcccgcgccc 1282733
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Minus Query: 126 ggagcgacgccgcgcccgcgcccgcgc 152 ||||||||||||||||||||| ||||| Sbjct: 120799 ggagcgacgccgcgcccgcgcgcgcgc 120773
>gb|AC136471.1| Solanum demissum chromosome 11 clone PGEC561, complete sequence Length = 123428 Score = 46.1 bits (23), Expect = 0.26 Identities = 53/63 (84%) Strand = Plus / Minus Query: 245 tttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagctta 304 ||||||||||| | ||| ||||||| ||||||||| ||| ||| |||||||| || ||| Sbjct: 91877 tttcatgatggaacgaagcagtggagttgttgcaagaaaaaaagtcatgatttcagttta 91818 Query: 305 ttt 307 ||| Sbjct: 91817 ttt 91815
>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland Research Institute) complete sequence Length = 143705 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 128 agcgacgccgcgcccgcgcccgcgccc 154 |||| |||||||||||||||||||||| Sbjct: 6795 agcgccgccgcgcccgcgcccgcgccc 6821
>gb|AY615275.1| Solanum tuberosum RAR1-like protein gene, partial cds Length = 1415 Score = 46.1 bits (23), Expect = 0.26 Identities = 53/63 (84%) Strand = Plus / Plus Query: 245 tttcatgatggcatgaaagagtggagctgttgcaagcaaagaagccatgattttagctta 304 ||||||||||| | ||| ||||||| ||||||||| ||| ||| |||||||| || ||| Sbjct: 906 tttcatgatggaacgaagcagtggagttgttgcaagaaaaaaagtcatgatttcagttta 965 Query: 305 ttt 307 ||| Sbjct: 966 ttt 968
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Minus Query: 126 ggagcgacgccgcgcccgcgcccgcgc 152 ||||||||||||||||||||| ||||| Sbjct: 2674279 ggagcgacgccgcgcccgcgcgcgcgc 2674253
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 131 gacgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||||| Sbjct: 38483219 gacgccgcgcccgcgcccgcgcc 38483241
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 131 gacgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||||| Sbjct: 3900 gacgccgcgcccgcgcccgcgcc 3922
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 131 gacgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||||| Sbjct: 68634 gacgccgcgcccgcgcccgcgcc 68656
>ref|XM_001078539.1| PREDICTED: Rattus norvegicus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA Length = 15220 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 13038 cgccgcgcccgcgcccgcgccc 13017
>ref|XM_341818.3| PREDICTED: Rattus norvegicus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA Length = 2811 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 747 cgccgcgcccgcgcccgcgccc 726
>ref|NM_129800.2| Arabidopsis thaliana DNA binding / transcription factor (AT2G42380) mRNA, complete cds Length = 1523 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 atgttcaccgacgacgacaacc 206 |||||||||||||||||||||| Sbjct: 568 atgttcaccgacgacgacaacc 589
>ref|NM_180038.1| Arabidopsis thaliana DNA binding / transcription factor (AT2G42380) mRNA, complete cds Length = 1556 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 atgttcaccgacgacgacaacc 206 |||||||||||||||||||||| Sbjct: 568 atgttcaccgacgacgacaacc 589
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 420196 acgccgcgcccgcgcccgcgcc 420217
>ref|XM_544702.2| PREDICTED: Canis familiaris similar to Y55F3AM.9 (LOC487577), mRNA Length = 2332 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 618 cgccgcgcccgcgcccgcgccc 597
>ref|XM_843943.1| PREDICTED: Canis familiaris similar to Protocadherin alpha 13 precursor (PCDH-alpha13) (LOC487166), mRNA Length = 2799 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2136 cgccgcgcccgcgcccgcgccc 2115
>ref|XM_843922.1| PREDICTED: Canis familiaris similar to protocadherin alpha 12 isoform 2 precursor (LOC607297), mRNA Length = 2439 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2109 cgccgcgcccgcgcccgcgccc 2088
>ref|XM_843882.1| PREDICTED: Canis familiaris similar to protocadherin alpha 10 (LOC607266), mRNA Length = 2496 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2115 cgccgcgcccgcgcccgcgccc 2094
>ref|XM_843862.1| PREDICTED: Canis familiaris similar to protocadherin alpha 10 isoform 2 precursor (LOC607253), mRNA Length = 2544 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2121 cgccgcgcccgcgcccgcgccc 2100
>ref|XM_843852.1| PREDICTED: Canis familiaris similar to protocadherin alpha 9 isoform 2 precursor (LOC487165), mRNA Length = 2490 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2121 cgccgcgcccgcgcccgcgccc 2100
>ref|XM_843838.1| PREDICTED: Canis familiaris similar to protocadherin alpha 6 isoform 2 precursor (LOC607224), mRNA Length = 2457 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2115 cgccgcgcccgcgcccgcgccc 2094
>ref|XM_843821.1| PREDICTED: Canis familiaris similar to protocadherin alpha 5 isoform 2 precursor (LOC607212), mRNA Length = 2397 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2106 cgccgcgcccgcgcccgcgccc 2085
>ref|XM_843807.1| PREDICTED: Canis familiaris similar to Protocadherin alpha 4 precursor (PCDH-alpha4) (LOC607199), mRNA Length = 2424 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2109 cgccgcgcccgcgcccgcgccc 2088
>ref|XM_843795.1| PREDICTED: Canis familiaris similar to protocadherin alpha 3 isoform 2 precursor (LOC607185), mRNA Length = 2538 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 2208 cgccgcgcccgcgcccgcgccc 2187
>gb|AC023102.6| Homo sapiens chromosome 8, clone RP11-414L17, complete sequence Length = 175263 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 77860 cgccgcgcccgcgcccgcgccc 77839
>gb|AC011611.26| Homo sapiens 12 BAC RP11-290L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179085 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgcccat 156 |||||||||||||||||||||| Sbjct: 119146 ccgcgcccgcgcccgcgcccat 119125
>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete sequence Length = 85835 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 atgttcaccgacgacgacaacc 206 |||||||||||||||||||||| Sbjct: 31634 atgttcaccgacgacgacaacc 31613
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 20646441 cgccgcgcccgcgcccgcgccc 20646462
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 18437632 cgccgcgcccgcgcccgcgccc 18437611
>gb|AY074657.1| Arabidopsis thaliana At2g42380/MHK10.10 mRNA, complete cds Length = 1009 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 atgttcaccgacgacgacaacc 206 |||||||||||||||||||||| Sbjct: 277 atgttcaccgacgacgacaacc 298
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 773184 cgccgcgcccgcgcccgcgccc 773163
>gb|AY179883.1| Zea mays cultivar W22 floricaula/leafy-like 1 (fl1) gene, partial cds Length = 2816 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 62 acgccgcgcccgcgcccgcgcc 83
>gb|AY179882.1| Zea mays cultivar A632 floricaula/leafy-like 1 (fl1) mRNA, complete cds Length = 1323 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 91 acgccgcgcccgcgcccgcgcc 112
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 47893 cgccgcgcccgcgcccgcgccc 47914
>gb|AF401299.1|AF401299 Arabidopsis thaliana transcription factor bZIP34 (BZIP34) mRNA, complete cds Length = 903 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 atgttcaccgacgacgacaacc 206 |||||||||||||||||||||| Sbjct: 253 atgttcaccgacgacgacaacc 274
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 129 gcgacgccgcgcccgcgcccgcgccc 154 |||| ||||||||||||||||||||| Sbjct: 2935869 gcgaggccgcgcccgcgcccgcgccc 2935894 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 672978 cgccgcgcccgcgcccgcgcc 672998 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 991305 gccgcgcccgcgcccgcgccc 991285 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 gcgacgccgcgcccgcgcccgcgcc 153 ||||||||||||||||| ||||||| Sbjct: 4268502 gcgacgccgcgcccgcggccgcgcc 4268526
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 1044315 acgccgcgcccgcgcccgcgcc 1044294
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 1739583 acgccgcgcccgcgcccgcgcc 1739604
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 152368 cgccgcgcccgcgcccgcgccc 152347
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 99506 cgccgcgcccgcgcccgcgccc 99485
>gb|AC010876.2| Homo sapiens BAC clone RP11-214A4 from 2, complete sequence Length = 95417 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 810 gcaccatgacctgcattaagat 831 |||||||||||||||||||||| Sbjct: 55648 gcaccatgacctgcattaagat 55627
>gb|AC015916.13| Homo sapiens chromosome 17, clone CTD-2339F15, complete sequence Length = 102564 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 72517 cgccgcgcccgcgcccgcgccc 72496
>ref|XM_957829.1| Neurospora crassa OR74A hypothetical protein (NCU06206.1) partial mRNA Length = 603 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 375 cgccgcgcccgcgcccgcgccc 354
>gb|AF239986.1|AF239986 Homo sapiens apoptosis-associated nuclear protein (PHLDA1) gene, complete cds Length = 4262 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgcccat 156 |||||||||||||||||||||| Sbjct: 3235 ccgcgcccgcgcccgcgcccat 3256
>gb|AY789605.1| Elionurus muticus FL gene, partial cds Length = 927 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 56 acgccgcgcccgcgcccgcgcc 77
>gb|AY789595.1| Tripsacum andersonii FL1 gene, partial cds Length = 939 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 32 acgccgcgcccgcgcccgcgcc 53
>gb|AY789594.1| Zea luxurians FL1 gene, partial cds Length = 1014 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 56 acgccgcgcccgcgcccgcgcc 77
>gb|AY789593.1| Zea mays FL1 gene, partial cds Length = 1039 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 56 acgccgcgcccgcgcccgcgcc 77
>gb|AY789592.1| Tripsacum latifolium FL1 gene, partial cds Length = 940 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 acgccgcgcccgcgcccgcgcc 153 |||||||||||||||||||||| Sbjct: 56 acgccgcgcccgcgcccgcgcc 77
>ref|NM_209486.1| Eremothecium gossypii ADR037Wp (ADR037W), mRNA Length = 759 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 706 cgccgcgcccgcgcccgcgccc 685
>ref|NM_208265.1| Eremothecium gossypii ABL035Cp (ABL035C), mRNA Length = 1497 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 912 cgccgcgcccgcgcccgcgccc 933
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgccc 154 |||||||||||||||||||||| Sbjct: 331663 cgccgcgcccgcgcccgcgccc 331642
>ref|XM_001018519.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00346730) mRNA, complete cds Length = 387 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 844 acagttatttgttgtagtatctcct 868 ||||||||||||| ||||||||||| Sbjct: 270 acagttatttgttttagtatctcct 246
>emb|CT836243.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI232P21, full insert sequence Length = 1611 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 188 gccgcgcccgcgcccgcgccc 168
>emb|CR855108.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0111I14, complete sequence Length = 82987 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 5697 cgccgcgcccgcgcccgcgcc 5677
>gb|AC192473.1| Mus musculus BAC clone RP23-2H19 from chromosome 14, complete sequence Length = 208978 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 164201 ccgcgcccgcgcccgcgccca 164181
>ref|XM_001223385.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_04172) mRNA, complete cds Length = 762 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 574 ccgcgcccgcgcccgcgccca 554
>ref|XM_001222409.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_06315) mRNA, complete cds Length = 726 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 396 cgccgcgcccgcgcccgcgcc 376
>gb|AC186378.2| Mus musculus BAC clone RP24-547N23 from chromosome 14, complete sequence Length = 235664 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 212084 ccgcgcccgcgcccgcgccca 212104
>dbj|AK241089.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065075K03, full insert sequence Length = 1347 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 880 cgccgcgcccgcgcccgcgcc 860
>ref|NM_001059046.1| Oryza sativa (japonica cultivar-group) Os04g0346000 (Os04g0346000) mRNA, complete cds Length = 1072 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 176 cgccgcgcccgcgcccgcgcc 156
>ref|NM_001058567.1| Oryza sativa (japonica cultivar-group) Os04g0111300 (Os04g0111300) mRNA, complete cds Length = 618 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 404 cgccgcgcccgcgcccgcgcc 384
>gb|AC191934.1| Mus musculus BAC clone RP23-263F24 from chromosome 14, complete sequence Length = 215727 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 209598 ccgcgcccgcgcccgcgccca 209618
>ref|XR_024953.1| PREDICTED: Pan troglodytes similar to NL7 (LOC464803), mRNA Length = 1539 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 34 ccgcgcccgcgcccgcgccca 54
>gb|AC190173.1| Mus musculus chromosome 14 clone RP24-80K11, complete sequence Length = 215483 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 132027 ccgcgcccgcgcccgcgccca 132007
>emb|AM286690.1| Alcanivorax borkumensis SK2, complete genome Length = 3120143 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 866269 gccgcgcccgcgcccgcgccc 866249
>gb|AC188089.1| Mus musculus chromosome 14 clone RP23-274E2, complete sequence Length = 212870 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 135066 ccgcgcccgcgcccgcgccca 135046
>gb|AC157601.7| Mus musculus BAC clone RP23-89F1 from chromosome 14, complete sequence Length = 211206 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 52310 ccgcgcccgcgcccgcgccca 52290
>ref|XR_011421.1| PREDICTED: Macaca mulatta similar to myosin XV (LOC700077), mRNA Length = 10815 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 1946 ccgcgcccgcgcccgcgccca 1966
>ref|XM_001097105.1| PREDICTED: Macaca mulatta similar to mitogen-activated protein kinase-activated protein kinase 3, transcript variant 1 (LOC701320), mRNA Length = 3405 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 gcagggtgtggaaactgaggc 447 ||||||||||||||||||||| Sbjct: 312 gcagggtgtggaaactgaggc 332
>gb|AC186381.2| Mus musculus BAC clone RP24-218O5 from chromosome 14, complete sequence Length = 167511 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 101416 ccgcgcccgcgcccgcgccca 101396
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 agcgacgccgcgcccgcgccc 148 ||||||||||||||||||||| Sbjct: 2351044 agcgacgccgcgcccgcgccc 2351024
>gb|AC162942.5| Mus musculus BAC clone RP23-80K12 from chromosome 14, complete sequence Length = 227944 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 123925 ccgcgcccgcgcccgcgccca 123945
>gb|AC167722.2| Mus musculus BAC clone RP23-71L2 from chromosome 14, complete sequence Length = 233679 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 36630 ccgcgcccgcgcccgcgccca 36650
>gb|AC166053.4| Mus musculus BAC clone RP24-122P17 from chromosome 14, complete sequence Length = 205155 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 194156 ccgcgcccgcgcccgcgccca 194176
>gb|AC161818.3| Mus musculus BAC clone RP23-198H15 from chromosome 14, complete sequence Length = 194224 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 132329 ccgcgcccgcgcccgcgccca 132309
>gb|BT018915.1| Zea mays clone EL01T0403H03.d mRNA sequence Length = 1155 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 663 gccgcgcccgcgcccgcgccc 683
>ref|XM_613938.2| PREDICTED: Bos taurus similar to Ras-related protein Rab-40B (SOCS box containing protein RAR) (Rar protein) (LOC534237), mRNA Length = 1747 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgcccatgc 158 |||||||| |||||||||||||||| Sbjct: 156 gccgcgccagcgcccgcgcccatgc 132
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 37232 cgccgcgcccgcgcccgcgcc 37212
>ref|XM_580667.2| PREDICTED: Bos taurus similar to growth arrest-specific 6 (LOC504526), mRNA Length = 2057 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 1848 gccgcgcccgcgcccgcgccc 1868
>gb|AC142107.2| Mus musculus BAC clone RP24-192I1 from chromosome 14, complete sequence Length = 160766 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 139035 ccgcgcccgcgcccgcgccca 139055
>gb|AC144775.2| Mus musculus BAC clone RP24-152K24 from chromosome 14, complete sequence Length = 151084 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 87906 ccgcgcccgcgcccgcgccca 87886
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence Length = 165049 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 54413 gccgcgcccgcgcccgcgccc 54393
>ref|XM_541964.2| PREDICTED: Canis familiaris similar to solute carrier family 35, member E1 (LOC484848), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 40 ccgcgcccgcgcccgcgccca 20
>ref|XM_538686.2| PREDICTED: Canis familiaris similar to DMRT-like family A1 (LOC481564), mRNA Length = 1542 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 76 gccgcgcccgcgcccgcgccc 96
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 3043194 gccgcgcccgcgcccgcgccc 3043214
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 115814 ccgcgcccgcgcccgcgccca 115794
>ref|XM_843901.1| PREDICTED: Canis familiaris similar to protocadherin alpha 11 isoform 2 precursor (LOC607280), mRNA Length = 2466 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 2100 cgccgcgcccgcgcccgcgcc 2080
>ref|XM_843778.1| PREDICTED: Canis familiaris similar to protocadherin alpha 1 isoform 2 precursor (LOC487164), mRNA Length = 2436 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 2097 cgccgcgcccgcgcccgcgcc 2077
>gb|AY358297.1| Homo sapiens clone DNA44184 NOGOR (UNQ330) mRNA, complete cds Length = 2236 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 115 ccgcgcccgcgcccgcgccca 135
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 gcgagaggggcacaaggaaga 71 ||||||||||||||||||||| Sbjct: 983777 gcgagaggggcacaaggaaga 983757
>ref|NM_032843.3| Homo sapiens fibrinogen C domain containing 1 (FIBCD1), mRNA gb|BC032953.2| Homo sapiens fibrinogen C domain containing 1, mRNA (cDNA clone MGC:33476 IMAGE:4811679), complete cds Length = 3194 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 158 ccgcgcccgcgcccgcgccca 178
>gb|AC027575.13| Homo sapiens chromosome 18, clone RP11-162A12, complete sequence Length = 165447 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 71482 ccgcgcccgcgcccgcgccca 71502
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 100696 gccgcgcccgcgcccgcgccc 100676
>gb|AC022164.8| Homo sapiens chromosome 16 clone RP11-513N24, complete sequence Length = 208207 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 aaaagctgtttctcttaactc 381 ||||||||||||||||||||| Sbjct: 161932 aaaagctgtttctcttaactc 161952
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 19965866 cgccgcgcccgcgcccgcgcc 19965846
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 640448 cgccgcgcccgcgcccgcgcc 640428 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 16463172 cgccgcgcccgcgcccgcgcc 16463152
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 388284 ccgcgcccgcgcccgcgccca 388264 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 10542984 gccgcgcccgcgcccgcgccc 10542964 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 24516097 cgccgcgcccgcgcccgcgcc 24516117
>ref|XM_682569.1| PREDICTED: Danio rerio similar to Tubulin tyrosine ligase-like protein 4 (LOC559248), mRNA Length = 1886 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atgaaagagtggagctgttgc 277 ||||||||||||||||||||| Sbjct: 181 atgaaagagtggagctgttgc 201
>ref|XM_681948.1| PREDICTED: Danio rerio similar to Tubulin tyrosine ligase-like protein 4 (LOC558702), mRNA Length = 1935 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atgaaagagtggagctgttgc 277 ||||||||||||||||||||| Sbjct: 230 atgaaagagtggagctgttgc 250
>emb|AL161773.21| Human DNA sequence from clone RP11-212E4 on chromosome 13 Contains the 5' end of the COL4A1 gene for collagen type IV alpha 1, the 5' end of the COL4A2 gene for collagen type IV alpha 2 and three CpG islands, complete sequence Length = 154195 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 389 gcaaccccaccaaagtcagctccag 413 |||||||| |||||||||||||||| Sbjct: 61915 gcaacccctccaaagtcagctccag 61939
>emb|AL138885.21| Human DNA sequence from clone RP1-290I10 on chromosome 6 Contains a ribosomal protein L7 (RPL7) pseudogene, the TFAP2A gene for transcription factor AP-2 alpha (activating enhancer-binding protein 2 alpha), four novel genes, a mitochondrial ribosomal protein L47 (MRPL47) pseudogene and 11 CpG islands, complete sequence Length = 180133 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 catacaactgagaaaccagtcacaa 362 ||||||||| ||||||||||||||| Sbjct: 122761 catacaactaagaaaccagtcacaa 122785
>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, complete cds Length = 15358 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 13179 gccgcgcccgcgcccgcgccc 13159
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 304587 cgccgcgcccgcgcccgcgcc 304607
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 234819 gccgcgcccgcgcccgcgccc 234839
>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11, complete sequence Length = 132394 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 123738 cgccgcgcccgcgcccgcgcc 123718
>gb|AC149395.2| Phakopsora pachyrhizi clone JGIAFNA-61H11, complete sequence Length = 30962 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 838 actcatacagttatttgttgt 858 ||||||||||||||||||||| Sbjct: 8093 actcatacagttatttgttgt 8113
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 30673 cgccgcgcccgcgcccgcgcc 30693
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 2397049 cgccgcgcccgcgcccgcgcc 2397069
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 104206 cgccgcgcccgcgcccgcgcc 104186
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 20383 cgccgcgcccgcgcccgcgcc 20363
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 69410 cgccgcgcccgcgcccgcgcc 69390
>emb|BX248389.8| Zebrafish DNA sequence from clone CH211-236C4 in linkage group 7, complete sequence Length = 134182 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 agaaaaaggttgttaatataaatga 597 |||||||||| |||||||||||||| Sbjct: 121380 agaaaaaggtggttaatataaatga 121404
>dbj|AK064621.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-D10, full insert sequence Length = 1073 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 177 cgccgcgcccgcgcccgcgcc 157
>emb|AL831758.22| Zebrafish DNA sequence from clone BUSM1-139E12 in linkage group 23, complete sequence Length = 106523 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 578 aaggttgttaatataaatgaa 598 ||||||||||||||||||||| Sbjct: 26190 aaggttgttaatataaatgaa 26210
>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete sequence Length = 249562 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 agggtttcttttgttctgacc 485 ||||||||||||||||||||| Sbjct: 46637 agggtttcttttgttctgacc 46657
>emb|BX247881.6| Zebrafish DNA sequence from clone DKEY-10M1 in linkage group 13, complete sequence Length = 219382 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 660 ctgcatgcgattaccatccag 680 ||||||||||||||||||||| Sbjct: 188200 ctgcatgcgattaccatccag 188220
>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence Length = 198847 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tcagggtttcttttgttctga 483 ||||||||||||||||||||| Sbjct: 192744 tcagggtttcttttgttctga 192764
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 1953575 gccgcgcccgcgcccgcgccc 1953595
>gb|AY898810.1| Chlamydomonas incerta homoserine dehydrogenase (HSD) gene, partial cds; and inositol monophosphatase (INM1) and GSP1 (GSP1) genes, complete cds Length = 10638 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 4504 ccgcgcccgcgcccgcgccca 4484
>emb|AL355052.3|CNS05TC4 Human chromosome 14 DNA sequence BAC R-1070A8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179712 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tcagggtttcttttgttctga 483 ||||||||||||||||||||| Sbjct: 172955 tcagggtttcttttgttctga 172975
>emb|AL161733.20| Human DNA sequence from clone RP11-83J21 on chromosome 9, complete sequence Length = 176466 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 162073 ccgcgcccgcgcccgcgccca 162053
>emb|AL606616.3|OSJN00070 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060M15, complete sequence Length = 119918 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 cgccgcgcccgcgcccgcgcc 153 ||||||||||||||||||||| Sbjct: 31320 cgccgcgcccgcgcccgcgcc 31300
>gb|AC130825.4| Mus musculus BAC clone RP23-390C6 from 14, complete sequence Length = 210712 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 15365 ccgcgcccgcgcccgcgccca 15345 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 148218 ccgcgcccgcgcccgcgccca 148198
>gb|AC136642.4| Mus musculus BAC clone RP23-401J21 from 14, complete sequence Length = 168250 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 81700 ccgcgcccgcgcccgcgccca 81720
>gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome 13, complete sequence Length = 198305 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 tcagggtttcttttgttctga 483 ||||||||||||||||||||| Sbjct: 72824 tcagggtttcttttgttctga 72844
>gb|AC164564.3| Mus musculus BAC clone RP23-96N11 from chromosome 7, complete sequence Length = 247415 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gccgcgcccgcgcccgcgccc 154 ||||||||||||||||||||| Sbjct: 238689 gccgcgcccgcgcccgcgccc 238669
>emb|AL117191.6|CNS01DRG Human chromosome 14 DNA sequence BAC C-2303G14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155307 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 tcagggtttcttttgttctga 483 ||||||||||||||||||||| Sbjct: 117518 tcagggtttcttttgttctga 117498
>gb|AC164114.2| Mus musculus BAC clone RP24-576O9 from chromosome 14, complete sequence Length = 182232 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 ccgcgcccgcgcccgcgccca 155 ||||||||||||||||||||| Sbjct: 130897 ccgcgcccgcgcccgcgccca 130917 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 194,971,238 Number of extensions: 10561586 Number of successful extensions: 229957 Number of sequences better than 10.0: 148 Number of HSP's gapped: 229855 Number of HSP's successfully gapped: 194 Length of query: 1068 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1045 Effective length of database: 18,503,978,556 Effective search space: 19336657591020 Effective search space used: 19336657591020 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
