No.
Definition
Score (bits)
E Value
1 ref|NM_001056601.1| Oryza sativa (japonica cultivar-group) Os03g...
414
e-112
2 dbj|AK100470.1| Oryza sativa (japonica cultivar-group) cDNA clon...
414
e-112
3 gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str...
287
7e-74
4 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
287
7e-74
5 gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome...
287
7e-74
6 gb|AY111637.1| Zea mays CL22329_1 mRNA sequence
149
4e-32
7 gb|AC183691.3| Echinops telfairi clone CH238-284L8, complete seq...
50
0.028
8 ref|XM_001135105.1| PREDICTED: Pan troglodytes hypothetical prot...
46
0.43
9 ref|XM_001130248.1| PREDICTED: Homo sapiens hypothetical protein...
46
0.43
10 ref|XM_001132121.1| PREDICTED: Homo sapiens hypothetical protein...
46
0.43
11 emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K...
46
0.43
12 gb|M25161.1|HUMNAKATP1 Human Na,K-ATPase beta subunit (ATP1B) ge...
46
0.43
13 gb|AY048670.1| Streptomyces globisporus enediyne antitumor antib...
46
0.43
14 ref|NM_001054658.1| Oryza sativa (japonica cultivar-group) Os02g...
44
1.7
15 gb|AY258461.1| Podovirus SOG clone SOG-S-R DNA polymerase gene, ...
44
1.7
16 gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosom...
44
1.7
17 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
44
1.7
18 dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D...
44
1.7
19 dbj|AK108296.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
1.7
20 gb|AC171729.2| Solanum lycopersicum chromosome 1 clone C01HBa025...
42
6.8
21 emb|CR855219.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
42
6.8
22 ref|XM_001224908.1| Chaetomium globosum CBS 148.51 hypothetical ...
42
6.8
23 ref|XM_001224057.1| Chaetomium globosum CBS 148.51 hypothetical ...
42
6.8
24 ref|NM_001070160.1| Oryza sativa (japonica cultivar-group) Os09g...
42
6.8
25 ref|NM_001059842.1| Oryza sativa (japonica cultivar-group) Os04g...
42
6.8
26 ref|XM_001068712.1| PREDICTED: Rattus norvegicus hypothetical pr...
42
6.8
27 gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
42
6.8
28 ref|XM_981545.1| PREDICTED: Mus musculus hypothetical protein LO...
42
6.8
29 ref|XM_001004501.1| PREDICTED: Mus musculus hypothetical protein...
42
6.8
30 gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen...
42
6.8
31 gb|CP000110.1| Synechococcus sp. CC9605, complete genome
42
6.8
32 gb|AC102475.7| Mus musculus chromosome 8, clone RP24-393D2, comp...
42
6.8
33 gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome...
42
6.8
34 gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, com...
42
6.8
35 gb|AC067742.7| Homo sapiens chromosome 10 clone RP11-508P23, com...
42
6.8
36 gb|AC022398.7| Homo sapiens chromosome 10 clone RP11-491H19, com...
42
6.8
37 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.8
38 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.8
39 gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome...
42
6.8
40 emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,...
42
6.8
41 emb|BX957305.5| Zebrafish DNA sequence from clone DKEYP-11G8 in ...
42
6.8
42 gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, c...
42
6.8
43 gb|U18796.1|SCE9379 Saccharomyces cerevisiae chromosome V cosmid...
42
6.8
44 dbj|AK121876.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.8
45 gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, c...
42
6.8
46 dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.8
47 gb|AC154265.2| Mus musculus BAC clone RP24-319O20 from 16, compl...
42
6.8
48 gb|AC122529.5| Mus musculus BAC clone RP24-511F2 from 3, complet...
42
6.8
49 gb|DQ332599.1| Synthetic construct Saccharomyces cerevisiae clon...
42
6.8
50 gb|AC006080.1|AC006080 Homo sapiens chromosome 17, clone hRPK.39...
42
6.8
51 gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, comp...
42
6.8
52 emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4,...
42
6.8
53 emb|AL592243.14| Mouse DNA sequence from clone RP23-101B24 on ch...
42
6.8
54 gb|J03526.1|YSCHOM3 Yeast (S.cerevisiae) aspartokinase gene, com...
42
6.8
>ref|NM_001056601.1 | Oryza sativa (japonica cultivar-group) Os03g0340700 (Os03g0340700)
mRNA, complete cds
Length = 1832
Score = 414 bits (209), Expect = e-112
Identities = 424/495 (85%), Gaps = 3/495 (0%)
Strand = Plus / Plus
Query: 1033 ggtgacatgtttggtgagatggatggttgggtggacgtggagtcggagtatgttggtggt 1092
|||||||||||||||||||||||||| |||||||| |||||| | || | ||||| ||
Sbjct: 1134 ggtgacatgtttggtgagatggatggctgggtggatgtggaggcagatt---ttggtagt 1190
Query: 1093 ggtgatagcagtggcacaaccacagagctggagggattaccgccaccaccgtctgggttg 1152
||||| ||| ||||| ||||||||||| |||||||| | || || |||||||||||||||
Sbjct: 1191 ggtgacagcggtggcgcaaccacagagttggagggactcccaccgccaccgtctgggttg 1250
Query: 1153 acggcatctgctgctaaggcaaaaggaatggataattacaagggtgggcagtatgctgat 1212
|| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1251 acagcatctgctgctaagtccaaagggatggataattacaagggtgggcagtatgctgat 1310
Query: 1213 gctatcaaatggttgtcttgggctgttctgctcatcgagaaaactgggaaaaatgctggt 1272
|| ||||| ||| |||| ||||| ||| | ||||| ||||| ||||||| ||||||
Sbjct: 1311 gcgatcaagtggctgtcatgggccgttgtactcattgagaagtctgggaagtatgctgac 1370
Query: 1273 attgcagaggtgttgtcatcaagggcctcctcctataaggaggtcggcgagtacaagaag 1332
|||| ||||||| ||||||||||||| || || || |||||||| || ||||||||||||
Sbjct: 1371 attgtagaggtgctgtcatcaagggcttcatcttacaaggaggttggggagtacaagaag 1430
Query: 1333 gctattgccgactgttcgaaggtgctcgagcaagataaggataatgtgtcggtgctagtg 1392
|| |||||||||||||||||||| || ||| |||||||||||||||| |||||||| ||
Sbjct: 1431 gcaattgccgactgttcgaaggtactagagaaagataaggataatgtttcggtgcttgtc 1490
Query: 1393 caacgtgctctcttatatgagagtagtgagaaatataggcttggggctgaggatctgcgt 1452
|||||||| || |||||||||| ||||||||| |||||||| || ||||| || |||
Sbjct: 1491 caacgtgcccttctatatgagagctctgagaaatacaggcttggtgcagaggacctccgt 1550
Query: 1453 tttgttctgaagattgaccctgggaatcgtcttgccaggagtatgattcatcgattgaac 1512
|| |||||||| |||||||| |||||| | ||||| ||||||||||| ||||| |||||
Sbjct: 1551 ttggttctgaaaattgacccagggaataggcttgcgaggagtatgatccatcgcctgaac 1610
Query: 1513 aaaatggctgactag 1527
|| ||||||||||||
Sbjct: 1611 aagatggctgactag 1625
Score = 125 bits (63), Expect = 6e-25
Identities = 146/173 (84%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 328 ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 387
||||||||||| | | |||||||||||||||||| |||||||||||||||| | | |||
Sbjct: 411 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 470
Query: 388 ccctcctccgacatcggcctccctcagtccaacaacccaaacctcttcagcgatctcctc 447
|| ||||||| | ||||| |||| ||| |||||||||| |||||||||||| ||||||
Sbjct: 471 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 530
Query: 448 gggcccgcgctcgg---atccacccgagcccagcccaacgcgccgctcagatc 497
|| |||||||||| ||| |||| | ||||||||||||||||||||||||
Sbjct: 531 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 583
Score = 103 bits (52), Expect = 2e-18
Identities = 123/146 (84%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 622 tatggggttggtggcctgccaatgaagccggtgggaatggcacccgcgaccgcgtcacag 681
||||| |||||||||| || |||||||||| ||| ||||| | ||| ||||| |||||
Sbjct: 717 tatggtgttggtggccgtccgatgaagccggcgggcatggcgtcggcggccgcggcacag 776
Query: 682 cccatg---gcgcagaagaaggatccgttcggctccatagatcccttcgcggcgaagcct 738
|| ||| | ||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 777 ccgatgatggggcagaagaaggatccgttcggttcaatagaccccttcgctgcgaagccc 836
Query: 739 gggtctatgaatgctgcaaagcaggc 764
|| |||||||||||||||||| ||||
Sbjct: 837 ggttctatgaatgctgcaaagaaggc 862
Score = 91.7 bits (46), Expect = 8e-15
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 112 tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 171
|||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 183 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 242
Query: 172 gcctcccgctcctccacctcccgccccctc 201
| ||||||||||| | ||||||||||||
Sbjct: 243 tcgtcccgctcctctgcgtcccgccccctc 272
Score = 65.9 bits (33), Expect = 5e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1570 ccttgacacggaaactgtgagttatttcaaattgttttactatacttctggctttggggg 1629
|||||||||| ||||||||||||||| ||||| |||||||||||| || |||||||||
Sbjct: 1667 ccttgacacgagaactgtgagttattttgaattgatttactatacttgtgcctttggggg 1726
Query: 1630 taataattt 1638
||||||||
Sbjct: 1727 -aataattt 1734
Score = 60.0 bits (30), Expect = 3e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 86 ccatgaactcctactccggcgaccggtcctcctc 119
||||||||||||||||||||||||| ||||||||
Sbjct: 145 ccatgaactcctactccggcgaccgctcctcctc 178
Score = 54.0 bits (27), Expect = 0.002
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 556 ttctcgatgggcggtttggcgagcacgctcccgaa 590
|||||||||||||| |||||||||||||||||||
Sbjct: 642 ttctcgatgggcggcatggcgagcacgctcccgaa 676
>dbj|AK100470.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023093E24, full
insert sequence
Length = 1833
Score = 414 bits (209), Expect = e-112
Identities = 424/495 (85%), Gaps = 3/495 (0%)
Strand = Plus / Plus
Query: 1033 ggtgacatgtttggtgagatggatggttgggtggacgtggagtcggagtatgttggtggt 1092
|||||||||||||||||||||||||| |||||||| |||||| | || | ||||| ||
Sbjct: 1135 ggtgacatgtttggtgagatggatggctgggtggatgtggaggcagatt---ttggtagt 1191
Query: 1093 ggtgatagcagtggcacaaccacagagctggagggattaccgccaccaccgtctgggttg 1152
||||| ||| ||||| ||||||||||| |||||||| | || || |||||||||||||||
Sbjct: 1192 ggtgacagcggtggcgcaaccacagagttggagggactcccaccgccaccgtctgggttg 1251
Query: 1153 acggcatctgctgctaaggcaaaaggaatggataattacaagggtgggcagtatgctgat 1212
|| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1252 acagcatctgctgctaagtccaaagggatggataattacaagggtgggcagtatgctgat 1311
Query: 1213 gctatcaaatggttgtcttgggctgttctgctcatcgagaaaactgggaaaaatgctggt 1272
|| ||||| ||| |||| ||||| ||| | ||||| ||||| ||||||| ||||||
Sbjct: 1312 gcgatcaagtggctgtcatgggccgttgtactcattgagaagtctgggaagtatgctgac 1371
Query: 1273 attgcagaggtgttgtcatcaagggcctcctcctataaggaggtcggcgagtacaagaag 1332
|||| ||||||| ||||||||||||| || || || |||||||| || ||||||||||||
Sbjct: 1372 attgtagaggtgctgtcatcaagggcttcatcttacaaggaggttggggagtacaagaag 1431
Query: 1333 gctattgccgactgttcgaaggtgctcgagcaagataaggataatgtgtcggtgctagtg 1392
|| |||||||||||||||||||| || ||| |||||||||||||||| |||||||| ||
Sbjct: 1432 gcaattgccgactgttcgaaggtactagagaaagataaggataatgtttcggtgcttgtc 1491
Query: 1393 caacgtgctctcttatatgagagtagtgagaaatataggcttggggctgaggatctgcgt 1452
|||||||| || |||||||||| ||||||||| |||||||| || ||||| || |||
Sbjct: 1492 caacgtgcccttctatatgagagctctgagaaatacaggcttggtgcagaggacctccgt 1551
Query: 1453 tttgttctgaagattgaccctgggaatcgtcttgccaggagtatgattcatcgattgaac 1512
|| |||||||| |||||||| |||||| | ||||| ||||||||||| ||||| |||||
Sbjct: 1552 ttggttctgaaaattgacccagggaataggcttgcgaggagtatgatccatcgcctgaac 1611
Query: 1513 aaaatggctgactag 1527
|| ||||||||||||
Sbjct: 1612 aagatggctgactag 1626
Score = 125 bits (63), Expect = 6e-25
Identities = 146/173 (84%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 328 ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 387
||||||||||| | | |||||||||||||||||| |||||||||||||||| | | |||
Sbjct: 412 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 471
Query: 388 ccctcctccgacatcggcctccctcagtccaacaacccaaacctcttcagcgatctcctc 447
|| ||||||| | ||||| |||| ||| |||||||||| |||||||||||| ||||||
Sbjct: 472 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 531
Query: 448 gggcccgcgctcgg---atccacccgagcccagcccaacgcgccgctcagatc 497
|| |||||||||| ||| |||| | ||||||||||||||||||||||||
Sbjct: 532 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 584
Score = 103 bits (52), Expect = 2e-18
Identities = 123/146 (84%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 622 tatggggttggtggcctgccaatgaagccggtgggaatggcacccgcgaccgcgtcacag 681
||||| |||||||||| || |||||||||| ||| ||||| | ||| ||||| |||||
Sbjct: 718 tatggtgttggtggccgtccgatgaagccggcgggcatggcgtcggcggccgcggcacag 777
Query: 682 cccatg---gcgcagaagaaggatccgttcggctccatagatcccttcgcggcgaagcct 738
|| ||| | ||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 778 ccgatgatggggcagaagaaggatccgttcggttcaatagaccccttcgctgcgaagccc 837
Query: 739 gggtctatgaatgctgcaaagcaggc 764
|| |||||||||||||||||| ||||
Sbjct: 838 ggttctatgaatgctgcaaagaaggc 863
Score = 91.7 bits (46), Expect = 8e-15
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 112 tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 171
|||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 184 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 243
Query: 172 gcctcccgctcctccacctcccgccccctc 201
| ||||||||||| | ||||||||||||
Sbjct: 244 tcgtcccgctcctctgcgtcccgccccctc 273
Score = 65.9 bits (33), Expect = 5e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1570 ccttgacacggaaactgtgagttatttcaaattgttttactatacttctggctttggggg 1629
|||||||||| ||||||||||||||| ||||| |||||||||||| || |||||||||
Sbjct: 1668 ccttgacacgagaactgtgagttattttgaattgatttactatacttgtgcctttggggg 1727
Query: 1630 taataattt 1638
||||||||
Sbjct: 1728 -aataattt 1735
Score = 60.0 bits (30), Expect = 3e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 86 ccatgaactcctactccggcgaccggtcctcctc 119
||||||||||||||||||||||||| ||||||||
Sbjct: 146 ccatgaactcctactccggcgaccgctcctcctc 179
Score = 54.0 bits (27), Expect = 0.002
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 556 ttctcgatgggcggtttggcgagcacgctcccgaa 590
|||||||||||||| |||||||||||||||||||
Sbjct: 643 ttctcgatgggcggcatggcgagcacgctcccgaa 677
>gb|AC131175.1 | Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0030D15, from chromosome 3, complete sequence
Length = 151972
Score = 287 bits (145), Expect = 7e-74
Identities = 279/323 (86%), Gaps = 3/323 (0%)
Strand = Plus / Minus
Query: 1033 ggtgacatgtttggtgagatggatggttgggtggacgtggagtcggagtatgttggtggt 1092
|||||||||||||||||||||||||| |||||||| |||||| | || | ||||| ||
Sbjct: 11757 ggtgacatgtttggtgagatggatggctgggtggatgtggaggcagatt---ttggtagt 11701
Query: 1093 ggtgatagcagtggcacaaccacagagctggagggattaccgccaccaccgtctgggttg 1152
||||| ||| ||||| ||||||||||| |||||||| | || || |||||||||||||||
Sbjct: 11700 ggtgacagcggtggcgcaaccacagagttggagggactcccaccgccaccgtctgggttg 11641
Query: 1153 acggcatctgctgctaaggcaaaaggaatggataattacaagggtgggcagtatgctgat 1212
|| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 11640 acagcatctgctgctaagtccaaagggatggataattacaagggtgggcagtatgctgat 11581
Query: 1213 gctatcaaatggttgtcttgggctgttctgctcatcgagaaaactgggaaaaatgctggt 1272
|| ||||| ||| |||| ||||| ||| | ||||| ||||| ||||||| ||||||
Sbjct: 11580 gcgatcaagtggctgtcatgggccgttgtactcattgagaagtctgggaagtatgctgac 11521
Query: 1273 attgcagaggtgttgtcatcaagggcctcctcctataaggaggtcggcgagtacaagaag 1332
|||| ||||||| ||||||||||||| || || || |||||||| || ||||||||||||
Sbjct: 11520 attgtagaggtgctgtcatcaagggcttcatcttacaaggaggttggggagtacaagaag 11461
Query: 1333 gctattgccgactgttcgaaggt 1355
|| ||||||||||||||||||||
Sbjct: 11460 gcaattgccgactgttcgaaggt 11438
Score = 135 bits (68), Expect = 6e-28
Identities = 140/164 (85%)
Strand = Plus / Minus
Query: 1364 aagataaggataatgtgtcggtgctagtgcaacgtgctctcttatatgagagtagtgaga 1423
|||||||||||||||| |||||||| || |||||||| || |||||||||| |||||
Sbjct: 11339 aagataaggataatgtttcggtgcttgtccaacgtgcccttctatatgagagctctgaga 11280
Query: 1424 aatataggcttggggctgaggatctgcgttttgttctgaagattgaccctgggaatcgtc 1483
|||| |||||||| || ||||| || ||||| |||||||| |||||||| |||||| | |
Sbjct: 11279 aatacaggcttggtgcagaggacctccgtttggttctgaaaattgacccagggaataggc 11220
Query: 1484 ttgccaggagtatgattcatcgattgaacaaaatggctgactag 1527
|||| ||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 11219 ttgcgaggagtatgatccatcgcctgaacaagatggctgactag 11176
Score = 125 bits (63), Expect = 6e-25
Identities = 146/173 (84%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 328 ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 387
||||||||||| | | |||||||||||||||||| |||||||||||||||| | | |||
Sbjct: 12480 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 12421
Query: 388 ccctcctccgacatcggcctccctcagtccaacaacccaaacctcttcagcgatctcctc 447
|| ||||||| | ||||| |||| ||| |||||||||| |||||||||||| ||||||
Sbjct: 12420 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 12361
Query: 448 gggcccgcgctcgg---atccacccgagcccagcccaacgcgccgctcagatc 497
|| |||||||||| ||| |||| | ||||||||||||||||||||||||
Sbjct: 12360 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 12308
Score = 103 bits (52), Expect = 2e-18
Identities = 123/146 (84%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 622 tatggggttggtggcctgccaatgaagccggtgggaatggcacccgcgaccgcgtcacag 681
||||| |||||||||| || |||||||||| ||| ||||| | ||| ||||| |||||
Sbjct: 12174 tatggtgttggtggccgtccgatgaagccggcgggcatggcgtcggcggccgcggcacag 12115
Query: 682 cccatg---gcgcagaagaaggatccgttcggctccatagatcccttcgcggcgaagcct 738
|| ||| | ||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 12114 ccgatgatggggcagaagaaggatccgttcggttcaatagaccccttcgctgcgaagccc 12055
Query: 739 gggtctatgaatgctgcaaagcaggc 764
|| |||||||||||||||||| ||||
Sbjct: 12054 ggttctatgaatgctgcaaagaaggc 12029
Score = 91.7 bits (46), Expect = 8e-15
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 112 tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 171
|||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 12708 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 12649
Query: 172 gcctcccgctcctccacctcccgccccctc 201
| ||||||||||| | ||||||||||||
Sbjct: 12648 tcgtcccgctcctctgcgtcccgccccctc 12619
Score = 65.9 bits (33), Expect = 5e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 1570 ccttgacacggaaactgtgagttatttcaaattgttttactatacttctggctttggggg 1629
|||||||||| ||||||||||||||| ||||| |||||||||||| || |||||||||
Sbjct: 11134 ccttgacacgagaactgtgagttattttgaattgatttactatacttgtgcctttggggg 11075
Query: 1630 taataattt 1638
||||||||
Sbjct: 11074 -aataattt 11067
Score = 60.0 bits (30), Expect = 3e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 86 ccatgaactcctactccggcgaccggtcctcctc 119
||||||||||||||||||||||||| ||||||||
Sbjct: 12746 ccatgaactcctactccggcgaccgctcctcctc 12713
Score = 54.0 bits (27), Expect = 0.002
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 556 ttctcgatgggcggtttggcgagcacgctcccgaa 590
|||||||||||||| |||||||||||||||||||
Sbjct: 12249 ttctcgatgggcggcatggcgagcacgctcccgaa 12215
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 287 bits (145), Expect = 7e-74
Identities = 279/323 (86%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 1033 ggtgacatgtttggtgagatggatggttgggtggacgtggagtcggagtatgttggtggt 1092
|||||||||||||||||||||||||| |||||||| |||||| | || | ||||| ||
Sbjct: 12661995 ggtgacatgtttggtgagatggatggctgggtggatgtggaggcagatt---ttggtagt 12662051
Query: 1093 ggtgatagcagtggcacaaccacagagctggagggattaccgccaccaccgtctgggttg 1152
||||| ||| ||||| ||||||||||| |||||||| | || || |||||||||||||||
Sbjct: 12662052 ggtgacagcggtggcgcaaccacagagttggagggactcccaccgccaccgtctgggttg 12662111
Query: 1153 acggcatctgctgctaaggcaaaaggaatggataattacaagggtgggcagtatgctgat 1212
|| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 12662112 acagcatctgctgctaagtccaaagggatggataattacaagggtgggcagtatgctgat 12662171
Query: 1213 gctatcaaatggttgtcttgggctgttctgctcatcgagaaaactgggaaaaatgctggt 1272
|| ||||| ||| |||| ||||| ||| | ||||| ||||| ||||||| ||||||
Sbjct: 12662172 gcgatcaagtggctgtcatgggccgttgtactcattgagaagtctgggaagtatgctgac 12662231
Query: 1273 attgcagaggtgttgtcatcaagggcctcctcctataaggaggtcggcgagtacaagaag 1332
|||| ||||||| ||||||||||||| || || || |||||||| || ||||||||||||
Sbjct: 12662232 attgtagaggtgctgtcatcaagggcttcatcttacaaggaggttggggagtacaagaag 12662291
Query: 1333 gctattgccgactgttcgaaggt 1355
|| ||||||||||||||||||||
Sbjct: 12662292 gcaattgccgactgttcgaaggt 12662314
Score = 135 bits (68), Expect = 6e-28
Identities = 140/164 (85%)
Strand = Plus / Plus
Query: 1364 aagataaggataatgtgtcggtgctagtgcaacgtgctctcttatatgagagtagtgaga 1423
|||||||||||||||| |||||||| || |||||||| || |||||||||| |||||
Sbjct: 12662413 aagataaggataatgtttcggtgcttgtccaacgtgcccttctatatgagagctctgaga 12662472
Query: 1424 aatataggcttggggctgaggatctgcgttttgttctgaagattgaccctgggaatcgtc 1483
|||| |||||||| || ||||| || ||||| |||||||| |||||||| |||||| | |
Sbjct: 12662473 aatacaggcttggtgcagaggacctccgtttggttctgaaaattgacccagggaataggc 12662532
Query: 1484 ttgccaggagtatgattcatcgattgaacaaaatggctgactag 1527
|||| ||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 12662533 ttgcgaggagtatgatccatcgcctgaacaagatggctgactag 12662576
Score = 125 bits (63), Expect = 6e-25
Identities = 146/173 (84%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 328 ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 387
||||||||||| | | |||||||||||||||||| |||||||||||||||| | | |||
Sbjct: 12661272 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 12661331
Query: 388 ccctcctccgacatcggcctccctcagtccaacaacccaaacctcttcagcgatctcctc 447
|| ||||||| | ||||| |||| ||| |||||||||| |||||||||||| ||||||
Sbjct: 12661332 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 12661391
Query: 448 gggcccgcgctcgg---atccacccgagcccagcccaacgcgccgctcagatc 497
|| |||||||||| ||| |||| | ||||||||||||||||||||||||
Sbjct: 12661392 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 12661444
Score = 103 bits (52), Expect = 2e-18
Identities = 123/146 (84%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 622 tatggggttggtggcctgccaatgaagccggtgggaatggcacccgcgaccgcgtcacag 681
||||| |||||||||| || |||||||||| ||| ||||| | ||| ||||| |||||
Sbjct: 12661578 tatggtgttggtggccgtccgatgaagccggcgggcatggcgtcggcggccgcggcacag 12661637
Query: 682 cccatg---gcgcagaagaaggatccgttcggctccatagatcccttcgcggcgaagcct 738
|| ||| | ||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 12661638 ccgatgatggggcagaagaaggatccgttcggttcaatagaccccttcgctgcgaagccc 12661697
Query: 739 gggtctatgaatgctgcaaagcaggc 764
|| |||||||||||||||||| ||||
Sbjct: 12661698 ggttctatgaatgctgcaaagaaggc 12661723
Score = 91.7 bits (46), Expect = 8e-15
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 112 tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 171
|||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 12661044 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 12661103
Query: 172 gcctcccgctcctccacctcccgccccctc 201
| ||||||||||| | ||||||||||||
Sbjct: 12661104 tcgtcccgctcctctgcgtcccgccccctc 12661133
Score = 65.9 bits (33), Expect = 5e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1570 ccttgacacggaaactgtgagttatttcaaattgttttactatacttctggctttggggg 1629
|||||||||| ||||||||||||||| ||||| |||||||||||| || |||||||||
Sbjct: 12662618 ccttgacacgagaactgtgagttattttgaattgatttactatacttgtgcctttggggg 12662677
Query: 1630 taataattt 1638
||||||||
Sbjct: 12662678 -aataattt 12662685
Score = 60.0 bits (30), Expect = 3e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 86 ccatgaactcctactccggcgaccggtcctcctc 119
||||||||||||||||||||||||| ||||||||
Sbjct: 12661006 ccatgaactcctactccggcgaccgctcctcctc 12661039
Score = 54.0 bits (27), Expect = 0.002
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 556 ttctcgatgggcggtttggcgagcacgctcccgaa 590
|||||||||||||| |||||||||||||||||||
Sbjct: 12661503 ttctcgatgggcggcatggcgagcacgctcccgaa 12661537
>gb|AC121491.2 | Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBb0050D18, complete sequence
Length = 126350
Score = 287 bits (145), Expect = 7e-74
Identities = 279/323 (86%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 1033 ggtgacatgtttggtgagatggatggttgggtggacgtggagtcggagtatgttggtggt 1092
|||||||||||||||||||||||||| |||||||| |||||| | || | ||||| ||
Sbjct: 19685 ggtgacatgtttggtgagatggatggctgggtggatgtggaggcagatt---ttggtagt 19741
Query: 1093 ggtgatagcagtggcacaaccacagagctggagggattaccgccaccaccgtctgggttg 1152
||||| ||| ||||| ||||||||||| |||||||| | || || |||||||||||||||
Sbjct: 19742 ggtgacagcggtggcgcaaccacagagttggagggactcccaccgccaccgtctgggttg 19801
Query: 1153 acggcatctgctgctaaggcaaaaggaatggataattacaagggtgggcagtatgctgat 1212
|| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct: 19802 acagcatctgctgctaagtccaaagggatggataattacaagggtgggcagtatgctgat 19861
Query: 1213 gctatcaaatggttgtcttgggctgttctgctcatcgagaaaactgggaaaaatgctggt 1272
|| ||||| ||| |||| ||||| ||| | ||||| ||||| ||||||| ||||||
Sbjct: 19862 gcgatcaagtggctgtcatgggccgttgtactcattgagaagtctgggaagtatgctgac 19921
Query: 1273 attgcagaggtgttgtcatcaagggcctcctcctataaggaggtcggcgagtacaagaag 1332
|||| ||||||| ||||||||||||| || || || |||||||| || ||||||||||||
Sbjct: 19922 attgtagaggtgctgtcatcaagggcttcatcttacaaggaggttggggagtacaagaag 19981
Query: 1333 gctattgccgactgttcgaaggt 1355
|| ||||||||||||||||||||
Sbjct: 19982 gcaattgccgactgttcgaaggt 20004
Score = 135 bits (68), Expect = 6e-28
Identities = 140/164 (85%)
Strand = Plus / Plus
Query: 1364 aagataaggataatgtgtcggtgctagtgcaacgtgctctcttatatgagagtagtgaga 1423
|||||||||||||||| |||||||| || |||||||| || |||||||||| |||||
Sbjct: 20103 aagataaggataatgtttcggtgcttgtccaacgtgcccttctatatgagagctctgaga 20162
Query: 1424 aatataggcttggggctgaggatctgcgttttgttctgaagattgaccctgggaatcgtc 1483
|||| |||||||| || ||||| || ||||| |||||||| |||||||| |||||| | |
Sbjct: 20163 aatacaggcttggtgcagaggacctccgtttggttctgaaaattgacccagggaataggc 20222
Query: 1484 ttgccaggagtatgattcatcgattgaacaaaatggctgactag 1527
|||| ||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 20223 ttgcgaggagtatgatccatcgcctgaacaagatggctgactag 20266
Score = 125 bits (63), Expect = 6e-25
Identities = 146/173 (84%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 328 ggatccgggcctatgcccatggtcggcgacatctccggccggagctggtccgctactgcg 387
||||||||||| | | |||||||||||||||||| |||||||||||||||| | | |||
Sbjct: 18962 ggatccgggcccacgtccatggtcggcgacatcttcggccggagctggtcctccgccgcg 19021
Query: 388 ccctcctccgacatcggcctccctcagtccaacaacccaaacctcttcagcgatctcctc 447
|| ||||||| | ||||| |||| ||| |||||||||| |||||||||||| ||||||
Sbjct: 19022 ccgtcctccggcctcggcatcccgcaggccaacaaccccggcctcttcagcgacctcctc 19081
Query: 448 gggcccgcgctcgg---atccacccgagcccagcccaacgcgccgctcagatc 497
|| |||||||||| ||| |||| | ||||||||||||||||||||||||
Sbjct: 19082 ggctccgcgctcgggtcgtcctcccgcggccagcccaacgcgccgctcagatc 19134
Score = 103 bits (52), Expect = 2e-18
Identities = 123/146 (84%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 622 tatggggttggtggcctgccaatgaagccggtgggaatggcacccgcgaccgcgtcacag 681
||||| |||||||||| || |||||||||| ||| ||||| | ||| ||||| |||||
Sbjct: 19268 tatggtgttggtggccgtccgatgaagccggcgggcatggcgtcggcggccgcggcacag 19327
Query: 682 cccatg---gcgcagaagaaggatccgttcggctccatagatcccttcgcggcgaagcct 738
|| ||| | ||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 19328 ccgatgatggggcagaagaaggatccgttcggttcaatagaccccttcgctgcgaagccc 19387
Query: 739 gggtctatgaatgctgcaaagcaggc 764
|| |||||||||||||||||| ||||
Sbjct: 19388 ggttctatgaatgctgcaaagaaggc 19413
Score = 91.7 bits (46), Expect = 8e-15
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 112 tcctcctctcgtcccaccacaacctccttcgactcctaccagtttgacttcggtgccaac 171
|||||||| || |||||||| ||||||||||||||||||||||| |||||||| | ||||
Sbjct: 18734 tcctcctcccgccccaccaccacctccttcgactcctaccagttcgacttcggcgtcaac 18793
Query: 172 gcctcccgctcctccacctcccgccccctc 201
| ||||||||||| | ||||||||||||
Sbjct: 18794 tcgtcccgctcctctgcgtcccgccccctc 18823
Score = 65.9 bits (33), Expect = 5e-07
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1570 ccttgacacggaaactgtgagttatttcaaattgttttactatacttctggctttggggg 1629
|||||||||| ||||||||||||||| ||||| |||||||||||| || |||||||||
Sbjct: 20308 ccttgacacgagaactgtgagttattttgaattgatttactatacttgtgcctttggggg 20367
Query: 1630 taataattt 1638
||||||||
Sbjct: 20368 -aataattt 20375
Score = 60.0 bits (30), Expect = 3e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 86 ccatgaactcctactccggcgaccggtcctcctc 119
||||||||||||||||||||||||| ||||||||
Sbjct: 18696 ccatgaactcctactccggcgaccgctcctcctc 18729
Score = 54.0 bits (27), Expect = 0.002
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 556 ttctcgatgggcggtttggcgagcacgctcccgaa 590
|||||||||||||| |||||||||||||||||||
Sbjct: 19193 ttctcgatgggcggcatggcgagcacgctcccgaa 19227
>gb|J03526.1 |YSCHOM3 Yeast (S.cerevisiae) aspartokinase gene, complete cds
Length = 2553
Score = 42.1 bits (21), Expect = 6.8
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1089 tggtggtgatagcagtggcac 1109
|||||||||||||||||||||
Sbjct: 1439 tggtggtgatagcagtggcac 1419
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 292,349,326
Number of extensions: 15967862
Number of successful extensions: 328088
Number of sequences better than 10.0: 54
Number of HSP's gapped: 328083
Number of HSP's successfully gapped: 92
Length of query: 1773
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1750
Effective length of database: 18,503,978,556
Effective search space: 32381962473000
Effective search space used: 32381962473000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)