| Clone Name | FLbaf15e18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066503:Os03g0145500 | 670 | 0.0 | 2 | AK067308:Os02g0777100 | 242 | 6e-64 | 3 | AK061634:Os02g0777100 | 86 | 9e-17 | 4 | AK119869: | 60 | 5e-09 | 5 | Os01g0575500:Os01g0575500 | 55 | 2e-07 | 6 | AK067198:Os01g0767900 | 33 | 0.69 |
|---|
>AK066503:Os03g0145500 | Length = 941 Score = 670 bits (1728), Expect = 0.0 Identities = 354/521 (67%), Positives = 387/521 (74%), Gaps = 36/521 (6%) Frame = +2 Query: 2 LHYEMLNSIISQERLERITQFASEIALAGPVPRSLREQLQDQSDGDFESPNGLSYNDWTE 181 LHYEMLNSII+QERL+RITQFASEIALA P+PRS++EQ Q + DFES N LSYNDWTE Sbjct: 425 LHYEMLNSIIAQERLDRITQFASEIALAEPIPRSMKEQSQVNGE-DFESANELSYNDWTE 483 Query: 182 YAVPVNSISGLVSSPGLTSERDAPSYLFRNWEPNXXXXXXXXXXXXXXYAKEPEKEGRHS 361 YAVPVNSISGL+SS GL SE + PSYLFR+WEPN Y +E EKEGRHS Sbjct: 484 YAVPVNSISGLISSSGLPSEGEIPSYLFRSWEPNSPESMSASETSDSSYIRELEKEGRHS 543 Query: 362 FQQYEDCISQNMESRCDSFGRASSTYENGQTSPDLLSMHSATSTRLERTPSMESLHSSVK 541 FQQYEDCIS+N+ SRCDSFGR S TYENG TSPDLLS HS S R+ R SMESLHSSVK Sbjct: 544 FQQYEDCISENLGSRCDSFGRTSYTYENGHTSPDLLSTHSPISRRIMRAQSMESLHSSVK 603 Query: 542 GAGSXXXXXXVNVKNESGVDDGKVLGWAKAHNNEPLQIVCGYHTLPLPPHGGEIVFQPLE 721 G GS +N+K E VDD KV+GWAK HNNEPLQIVCGYH L LPP GGE+VF PLE Sbjct: 604 GVGSDEEEE-LNMKQEIVVDDEKVMGWAKVHNNEPLQIVCGYHALALPPRGGELVFHPLE 662 Query: 722 HLQPVKYSRPXXXXXXXXXXXXXXXXXXAETNLVIVNARLVXXXXXXXXSIWTMATVCRA 901 HLQPVKYSRP E V NARL SIWT AT+CRA Sbjct: 663 HLQPVKYSRPGLSLLGLGDTISDNGLTSVEKTEV--NARLAAAEEAIALSIWTTATICRA 720 Query: 902 LSLESMLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLIDF 1081 LSLES+L LF LLEKQIVVIC NLGVLSAIVLS++PMIRPFQWQSLLLPVLPRKL+DF Sbjct: 721 LSLESVLELFAAALLEKQIVVICSNLGVLSAIVLSVMPMIRPFQWQSLLLPVLPRKLVDF 780 Query: 1082 IDAPVPFIAGIQHKPPDIKMKASSLVRINVQKDQVKANLLPQLPRYKDLVSDLSPIHSRL 1261 +DAPVPFIAG+QHKPPDIKMKASS+VRINV KDQVKA LPQLPR+K+LVSDLSPIH+RL Sbjct: 781 LDAPVPFIAGVQHKPPDIKMKASSIVRINVDKDQVKACSLPQLPRFKELVSDLSPIHARL 840 Query: 1262 SCEDALAKKHPMYKCNEVQ------------------------------------VSLLL 1333 SCE+ALAK+HP+YKCNEVQ VSLLL Sbjct: 841 SCENALAKRHPIYKCNEVQAEAAWQFLNVMRSYLESLCSDLPSHTITNVQSNNDRVSLLL 900 Query: 1334 KDSFIDSFPSKDRPFMKLFVETQMFSVLSDSRLATFENEHT 1456 KDSFIDSFPSKDRPF+KLFVETQMFSVLSDSRL+TFENE T Sbjct: 901 KDSFIDSFPSKDRPFVKLFVETQMFSVLSDSRLSTFENELT 941
>AK067308:Os02g0777100 | Length = 832 Score = 242 bits (618), Expect = 6e-64 Identities = 128/334 (38%), Positives = 188/334 (56%), Gaps = 42/334 (12%) Frame = +2 Query: 575 NVKNESGVDDGKVLG------WAKAHNNEPLQIVCGYHTLPLPPHGGEIVFQPLEHLQPV 736 +++ S + G ++G WAKA LQ+V Y+ L P G + F PL+HL P+ Sbjct: 499 DLEEPSSIGHGDLVGHNNISQWAKAKKYGSLQVVSQYYQLQCPARGSSLTFHPLDHLHPL 558 Query: 737 KYSRPXXXXXXXXXXXXXXXXXXAETNLVIVNARLVXXXXXXXXSIWTMATVCRALSLES 916 ++ RP + + L S W +A++C L LE Sbjct: 559 RFHRPGETVLHIAGSTIDLRSCDTSLEVAEMRNALFAEEESTALSTWAVASICGCLRLEH 618 Query: 917 MLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLIDFIDAPV 1096 ++ LF LLEKQI+++C NLG+LSA VLSIIP+IRP+QWQSLL+PVLP ++DF+DAPV Sbjct: 619 VMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQSLLIPVLPNDMMDFLDAPV 678 Query: 1097 PFIAGIQHKPPDIKMKASSLVRINVQKDQVKANLLPQLPRYKDLVSDLSPIHSRLSCEDA 1276 P+I G+Q+K D+ + + V I+ K+Q+K+ +PQLP+ K+L+S L P HSRL E Sbjct: 679 PYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLPQQKELLSALRPYHSRLVGESF 738 Query: 1277 LAKKHPMYKCNEVQ------------------------------------VSLLLKDSFI 1348 LA+K P+Y+C + Q VSLLL++SFI Sbjct: 739 LARKRPVYECTDAQVEAAKGFLAVLRSYLDSLCSNLRSHTITNVQSNNDKVSLLLRESFI 798 Query: 1349 DSFPSKDRPFMKLFVETQMFSVLSDSRLATFENE 1450 SFP+++RPFMKLFV+TQ+FSV +D L+ ++ + Sbjct: 799 GSFPTRERPFMKLFVDTQLFSVHTDLVLSFYQKD 832
>AK061634:Os02g0777100 | Length = 125 Score = 85.9 bits (211), Expect = 9e-17 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 36/125 (28%) Frame = +2 Query: 1184 VKANLLPQLPRYKDLVSDLSPIHSRLSCEDALAKKHPMYKCNEVQV-------------- 1321 +K+ +PQLP+ K+L+S L P HSRL E LA+K P+Y+C + QV Sbjct: 1 IKSTSVPQLPQQKELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAAKGFLAVLRSYL 60 Query: 1322 ----------------------SLLLKDSFIDSFPSKDRPFMKLFVETQMFSVLSDSRLA 1435 SLLL++SFI SFP+++RPFMKLFV+TQ+FSV +D L+ Sbjct: 61 DSLCSNLRSHTITNVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQLFSVHTDLVLS 120 Query: 1436 TFENE 1450 ++ + Sbjct: 121 FYQKD 125
>AK119869: | Length = 1009 Score = 60.1 bits (144), Expect = 5e-09 Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 1/91 (1%) Frame = +2 Query: 902 LSLESMLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLIDF 1081 L ++ ++ +L+E++++ I NL LS+ V + ++ PF WQ + +PV+P+ L+ F Sbjct: 316 LDASNIASILASLLVERRMIFIATNLNTLSSCVQAAASILYPFNWQHIFIPVVPQSLLSF 375 Query: 1082 IDAPVPFIAGI-QHKPPDIKMKASSLVRINV 1171 AP+PF+ GI + P++K + ++ + V Sbjct: 376 CCAPMPFLVGILRVHLPELKKLSDAMEEVVV 406
>Os01g0575500:Os01g0575500 | Length = 1248 Score = 55.1 bits (131), Expect = 2e-07 Identities = 23/73 (31%), Positives = 47/73 (64%) Frame = +2 Query: 896 RALSLESMLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLI 1075 + L ++ ++ LFT VLLE++I++ +L+ + +I +I P +WQ + +P++ + Sbjct: 213 QCLDVDKLIQLFTAVLLERRILLRSNKYTLLTLVSEAICHLIYPLRWQHVYIPIIFSSGV 272 Query: 1076 DFIDAPVPFIAGI 1114 D+IDAP P++ G+ Sbjct: 273 DYIDAPTPYMMGL 285
>AK067198:Os01g0767900 | Length = 635 Score = 33.1 bits (74), Expect = 0.69 Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 15/184 (8%) Frame = +2 Query: 965 ICPNLGVLSAIVLSIIPMIRPFQWQ-SLLLPVLPRKLIDFIDA-------PVPFIAGIQH 1120 +CP+ AI ++ M + ++ + L+ + R+L++F+D P+ +A Sbjct: 201 MCPHDSCPPAIRFNVEQMYAAWAFKITELISLFQRRLLNFVDKTLVEDVLPILQVAFHSE 260 Query: 1121 KPPDIKMKASSLVRINVQKDQVKANLLPQLP-RYKDLVSDLSPIHSRLSCEDALAKK--- 1288 P ++ + R N+ + L P++ + K++ P D + +K Sbjct: 261 LTPVLEKCIRRIARSNLDNVSLDKELPPEVAVQIKEIRQKSQPNEGDTVISDPVHEKRVR 320 Query: 1289 --HPMYKCNEVQ-VSLLLKDSFIDSFPSKDRPFMKLFVETQMFSVLSDSRLATFENEHTR 1459 H ++V+ V LLL +S I + + + ++++ S L D RLA +++R Sbjct: 321 RIHRALDSDDVELVKLLLNESEITLDDANALHYAAAYCDSKVVSELLDLRLANLNLKNSR 380 Query: 1460 GFAS 1471 G+ + Sbjct: 381 GYTA 384 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 52,918,106 Number of extensions: 1189109 Number of successful extensions: 2798 Number of sequences better than 10.0: 6 Number of HSP's gapped: 2794 Number of HSP's successfully gapped: 9 Length of query: 629 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 522 Effective length of database: 11,115,468 Effective search space: 5802274296 Effective search space used: 5802274296 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)