ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf15e18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066503:Os03g0145500 670 0.0
2AK067308:Os02g0777100 242 6e-64
3AK061634:Os02g0777100 86 9e-17
4AK119869: 60 5e-09
5Os01g0575500:Os01g0575500 55 2e-07
6AK067198:Os01g0767900 33 0.69

>AK066503:Os03g0145500 |
          Length = 941
 Score =  670 bits (1728), Expect = 0.0
 Identities = 354/521 (67%), Positives = 387/521 (74%), Gaps = 36/521 (6%)
 Frame = +2

Query: 2    LHYEMLNSIISQERLERITQFASEIALAGPVPRSLREQLQDQSDGDFESPNGLSYNDWTE 181
            LHYEMLNSII+QERL+RITQFASEIALA P+PRS++EQ Q   + DFES N LSYNDWTE
Sbjct: 425  LHYEMLNSIIAQERLDRITQFASEIALAEPIPRSMKEQSQVNGE-DFESANELSYNDWTE 483

Query: 182  YAVPVNSISGLVSSPGLTSERDAPSYLFRNWEPNXXXXXXXXXXXXXXYAKEPEKEGRHS 361
            YAVPVNSISGL+SS GL SE + PSYLFR+WEPN              Y +E EKEGRHS
Sbjct: 484  YAVPVNSISGLISSSGLPSEGEIPSYLFRSWEPNSPESMSASETSDSSYIRELEKEGRHS 543

Query: 362  FQQYEDCISQNMESRCDSFGRASSTYENGQTSPDLLSMHSATSTRLERTPSMESLHSSVK 541
            FQQYEDCIS+N+ SRCDSFGR S TYENG TSPDLLS HS  S R+ R  SMESLHSSVK
Sbjct: 544  FQQYEDCISENLGSRCDSFGRTSYTYENGHTSPDLLSTHSPISRRIMRAQSMESLHSSVK 603

Query: 542  GAGSXXXXXXVNVKNESGVDDGKVLGWAKAHNNEPLQIVCGYHTLPLPPHGGEIVFQPLE 721
            G GS      +N+K E  VDD KV+GWAK HNNEPLQIVCGYH L LPP GGE+VF PLE
Sbjct: 604  GVGSDEEEE-LNMKQEIVVDDEKVMGWAKVHNNEPLQIVCGYHALALPPRGGELVFHPLE 662

Query: 722  HLQPVKYSRPXXXXXXXXXXXXXXXXXXAETNLVIVNARLVXXXXXXXXSIWTMATVCRA 901
            HLQPVKYSRP                   E   V  NARL         SIWT AT+CRA
Sbjct: 663  HLQPVKYSRPGLSLLGLGDTISDNGLTSVEKTEV--NARLAAAEEAIALSIWTTATICRA 720

Query: 902  LSLESMLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLIDF 1081
            LSLES+L LF   LLEKQIVVIC NLGVLSAIVLS++PMIRPFQWQSLLLPVLPRKL+DF
Sbjct: 721  LSLESVLELFAAALLEKQIVVICSNLGVLSAIVLSVMPMIRPFQWQSLLLPVLPRKLVDF 780

Query: 1082 IDAPVPFIAGIQHKPPDIKMKASSLVRINVQKDQVKANLLPQLPRYKDLVSDLSPIHSRL 1261
            +DAPVPFIAG+QHKPPDIKMKASS+VRINV KDQVKA  LPQLPR+K+LVSDLSPIH+RL
Sbjct: 781  LDAPVPFIAGVQHKPPDIKMKASSIVRINVDKDQVKACSLPQLPRFKELVSDLSPIHARL 840

Query: 1262 SCEDALAKKHPMYKCNEVQ------------------------------------VSLLL 1333
            SCE+ALAK+HP+YKCNEVQ                                    VSLLL
Sbjct: 841  SCENALAKRHPIYKCNEVQAEAAWQFLNVMRSYLESLCSDLPSHTITNVQSNNDRVSLLL 900

Query: 1334 KDSFIDSFPSKDRPFMKLFVETQMFSVLSDSRLATFENEHT 1456
            KDSFIDSFPSKDRPF+KLFVETQMFSVLSDSRL+TFENE T
Sbjct: 901  KDSFIDSFPSKDRPFVKLFVETQMFSVLSDSRLSTFENELT 941



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>AK067308:Os02g0777100 |
          Length = 832

 Score =  242 bits (618), Expect = 6e-64
 Identities = 128/334 (38%), Positives = 188/334 (56%), Gaps = 42/334 (12%)
 Frame = +2

Query: 575  NVKNESGVDDGKVLG------WAKAHNNEPLQIVCGYHTLPLPPHGGEIVFQPLEHLQPV 736
            +++  S +  G ++G      WAKA     LQ+V  Y+ L  P  G  + F PL+HL P+
Sbjct: 499  DLEEPSSIGHGDLVGHNNISQWAKAKKYGSLQVVSQYYQLQCPARGSSLTFHPLDHLHPL 558

Query: 737  KYSRPXXXXXXXXXXXXXXXXXXAETNLVIVNARLVXXXXXXXXSIWTMATVCRALSLES 916
            ++ RP                      +  +   L         S W +A++C  L LE 
Sbjct: 559  RFHRPGETVLHIAGSTIDLRSCDTSLEVAEMRNALFAEEESTALSTWAVASICGCLRLEH 618

Query: 917  MLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLIDFIDAPV 1096
            ++ LF   LLEKQI+++C NLG+LSA VLSIIP+IRP+QWQSLL+PVLP  ++DF+DAPV
Sbjct: 619  VMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQSLLIPVLPNDMMDFLDAPV 678

Query: 1097 PFIAGIQHKPPDIKMKASSLVRINVQKDQVKANLLPQLPRYKDLVSDLSPIHSRLSCEDA 1276
            P+I G+Q+K  D+  +  + V I+  K+Q+K+  +PQLP+ K+L+S L P HSRL  E  
Sbjct: 679  PYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLPQQKELLSALRPYHSRLVGESF 738

Query: 1277 LAKKHPMYKCNEVQ------------------------------------VSLLLKDSFI 1348
            LA+K P+Y+C + Q                                    VSLLL++SFI
Sbjct: 739  LARKRPVYECTDAQVEAAKGFLAVLRSYLDSLCSNLRSHTITNVQSNNDKVSLLLRESFI 798

Query: 1349 DSFPSKDRPFMKLFVETQMFSVLSDSRLATFENE 1450
             SFP+++RPFMKLFV+TQ+FSV +D  L+ ++ +
Sbjct: 799  GSFPTRERPFMKLFVDTQLFSVHTDLVLSFYQKD 832



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>AK061634:Os02g0777100 |
          Length = 125

 Score = 85.9 bits (211), Expect = 9e-17
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 36/125 (28%)
 Frame = +2

Query: 1184 VKANLLPQLPRYKDLVSDLSPIHSRLSCEDALAKKHPMYKCNEVQV-------------- 1321
            +K+  +PQLP+ K+L+S L P HSRL  E  LA+K P+Y+C + QV              
Sbjct: 1    IKSTSVPQLPQQKELLSALRPYHSRLVGESFLARKRPVYECTDAQVEAAKGFLAVLRSYL 60

Query: 1322 ----------------------SLLLKDSFIDSFPSKDRPFMKLFVETQMFSVLSDSRLA 1435
                                  SLLL++SFI SFP+++RPFMKLFV+TQ+FSV +D  L+
Sbjct: 61   DSLCSNLRSHTITNVQSNNDKVSLLLRESFIGSFPTRERPFMKLFVDTQLFSVHTDLVLS 120

Query: 1436 TFENE 1450
             ++ +
Sbjct: 121  FYQKD 125



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>AK119869: |
          Length = 1009

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +2

Query: 902  LSLESMLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLIDF 1081
            L   ++ ++   +L+E++++ I  NL  LS+ V +   ++ PF WQ + +PV+P+ L+ F
Sbjct: 316  LDASNIASILASLLVERRMIFIATNLNTLSSCVQAAASILYPFNWQHIFIPVVPQSLLSF 375

Query: 1082 IDAPVPFIAGI-QHKPPDIKMKASSLVRINV 1171
              AP+PF+ GI +   P++K  + ++  + V
Sbjct: 376  CCAPMPFLVGILRVHLPELKKLSDAMEEVVV 406



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>Os01g0575500:Os01g0575500 |
          Length = 1248

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/73 (31%), Positives = 47/73 (64%)
 Frame = +2

Query: 896  RALSLESMLALFTGVLLEKQIVVICPNLGVLSAIVLSIIPMIRPFQWQSLLLPVLPRKLI 1075
            + L ++ ++ LFT VLLE++I++      +L+ +  +I  +I P +WQ + +P++    +
Sbjct: 213  QCLDVDKLIQLFTAVLLERRILLRSNKYTLLTLVSEAICHLIYPLRWQHVYIPIIFSSGV 272

Query: 1076 DFIDAPVPFIAGI 1114
            D+IDAP P++ G+
Sbjct: 273  DYIDAPTPYMMGL 285



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>AK067198:Os01g0767900 |
          Length = 635

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
 Frame = +2

Query: 965  ICPNLGVLSAIVLSIIPMIRPFQWQ-SLLLPVLPRKLIDFIDA-------PVPFIAGIQH 1120
            +CP+     AI  ++  M   + ++ + L+ +  R+L++F+D        P+  +A    
Sbjct: 201  MCPHDSCPPAIRFNVEQMYAAWAFKITELISLFQRRLLNFVDKTLVEDVLPILQVAFHSE 260

Query: 1121 KPPDIKMKASSLVRINVQKDQVKANLLPQLP-RYKDLVSDLSPIHSRLSCEDALAKK--- 1288
              P ++     + R N+    +   L P++  + K++     P        D + +K   
Sbjct: 261  LTPVLEKCIRRIARSNLDNVSLDKELPPEVAVQIKEIRQKSQPNEGDTVISDPVHEKRVR 320

Query: 1289 --HPMYKCNEVQ-VSLLLKDSFIDSFPSKDRPFMKLFVETQMFSVLSDSRLATFENEHTR 1459
              H     ++V+ V LLL +S I    +    +   + ++++ S L D RLA    +++R
Sbjct: 321  RIHRALDSDDVELVKLLLNESEITLDDANALHYAAAYCDSKVVSELLDLRLANLNLKNSR 380

Query: 1460 GFAS 1471
            G+ +
Sbjct: 381  GYTA 384


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 52,918,106
Number of extensions: 1189109
Number of successful extensions: 2798
Number of sequences better than 10.0: 6
Number of HSP's gapped: 2794
Number of HSP's successfully gapped: 9
Length of query: 629
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 522
Effective length of database: 11,115,468
Effective search space: 5802274296
Effective search space used: 5802274296
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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