ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf15c24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O95886:DLGP3_HUMAN Disks large-associated protein 3 - Homo sapie... 33 0.78
2Q07436:EXPA_DROME Protein expanded - Drosophila melanogaster (Fr... 32 2.2
3Q811L6:MAST4_MOUSE Microtubule-associated serine/threonine-prote... 31 2.9
4Q99583:MNT_HUMAN Max-binding protein MNT - Homo sapiens (Human) 30 5.0
5P97838:DLGP3_RAT Disks large-associated protein 3 - Rattus norve... 30 5.0
6Q6PFD5:DLGP3_MOUSE Disks large-associated protein 3 - Mus muscul... 30 5.0
7P00760:TRY1_BOVIN Cationic trypsin precursor - Bos taurus (Bovine) 30 6.5
8P22758:TGM1_RABIT Protein-glutamine gamma-glutamyltransferase K ... 30 6.5
9P15800:LAMB2_RAT Laminin subunit beta-2 precursor - Rattus norve... 30 8.5
10Q9D9W6:CF146_MOUSE Uncharacterized protein C6orf146 homolog - Mu... 30 8.5
11Q8BLS7:ANR43_MOUSE Ankyrin repeat domain-containing protein 43 p... 30 8.5

>O95886:DLGP3_HUMAN Disks large-associated protein 3 - Homo sapiens (Human)|
          Length = 979
 Score = 33.1 bits (74), Expect = 0.78
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = -1

Query: 270 SRGYWHLHRSC*SDHPREMELPEVEGGVPPSPHLGPLCSERPSCSSRIWGALGRGDGS-G 94
           S G+W       SD   + +   + GG PP    GP C E P  S R     GR  GS G
Sbjct: 257 STGWWS------SDDNLDSDSGFLAGGRPPGEPGGPFCLEGPDGSYRDLSFKGRSGGSEG 310

Query: 93  TSLATTEAHVRCWGEAV 43
             LA T   +   G++V
Sbjct: 311 RCLACTGMSMSLDGQSV 327



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>Q07436:EXPA_DROME Protein expanded - Drosophila melanogaster (Fruit fly)|
          Length = 1427

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 156 STRDLNGEREALPLRPRGAPSHGGDPTSNSCGDANSHGSTRSE 284
           S +DL  +  AL +RP+ A S+G    +NS    NS G+T ++
Sbjct: 507 SLKDLEEQLAALSVRPQDASSNGATIVTNSSVQRNSMGTTAND 549



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>Q811L6:MAST4_MOUSE Microtubule-associated serine/threonine-protein kinase 4 - Mus|
            musculus (Mouse)
          Length = 2618

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = +2

Query: 41   TTASPQHRTCASVVARLVPDPSPLPSAPQMREL 139
            TT S  H  C+S  AR  PDPSP  S  Q R L
Sbjct: 2185 TTTSAGHSDCSSHKARPGPDPSPSKSKHQDRSL 2217



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>Q99583:MNT_HUMAN Max-binding protein MNT - Homo sapiens (Human)|
          Length = 582

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 17  PLGRCAQPTTASPQHRTCASVVARLVPDPSPLPSAPQM 130
           PL   AQP   +P+           + +P+PLPS PQ+
Sbjct: 106 PLPAAAQPLPLAPRQPALVGAPGLSIKEPAPLPSRPQV 143



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>P97838:DLGP3_RAT Disks large-associated protein 3 - Rattus norvegicus (Rat)|
          Length = 977

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 195 GGVPPSPHLGPLCSERPSCSSRIWGALGRGDGS-GTSLATTEAHVRCWGEAV 43
           GG PP    GP C + P  S R     GR  GS G  LA T   +   G++V
Sbjct: 274 GGRPPGEPGGPFCLDAPDGSYRDLSFKGRSGGSEGRCLACTGMSMSLDGQSV 325



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>Q6PFD5:DLGP3_MOUSE Disks large-associated protein 3 - Mus musculus (Mouse)|
          Length = 977

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 195 GGVPPSPHLGPLCSERPSCSSRIWGALGRGDGS-GTSLATTEAHVRCWGEAV 43
           GG PP    GP C + P  S R     GR  GS G  LA T   +   G++V
Sbjct: 274 GGRPPGEPGGPFCLDAPDGSYRDLSFKGRSGGSEGRCLACTGMSMSLDGQSV 325



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>P00760:TRY1_BOVIN Cationic trypsin precursor - Bos taurus (Bovine)|
          Length = 243

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 18/138 (13%)
 Frame = -2

Query: 530 PFPASLPNGMHACVGLNF*SQVITSFPVAHKY---VQLSLEHSNSQVLF*TRMLPSRFAS 360
           P+  SL +G H C G    SQ + S   AH Y   +Q+ L   N  V+       S   S
Sbjct: 33  PYQVSLNSGYHFCGGSLINSQWVVS--AAHCYKSGIQVRLGEDNINVVEGNEQFISASKS 90

Query: 359 ILDQRSSAKSCSTHLKTAEDVECCKLRSSGAV-----AIGISTGVASRITPV---RWSSP 204
           I+    ++ + +       D+   KL+S+ ++     +I + T  AS  T      W + 
Sbjct: 91  IVHPSYNSNTLN------NDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNT 144

Query: 203 RSKG-------ECLPLPI 171
           +S G       +CL  PI
Sbjct: 145 KSSGTSYPDVLKCLKAPI 162



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>P22758:TGM1_RABIT Protein-glutamine gamma-glutamyltransferase K - Oryctolagus|
           cuniculus (Rabbit)
          Length = 836

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 20/47 (42%), Positives = 23/47 (48%)
 Frame = +3

Query: 129 CASCRRAAPSTRDLNGEREALPLRPRGAPSHGGDPTSNSCGDANSHG 269
           C SCR AA    D +  RE    R RG+ S GG P S   G  N+ G
Sbjct: 80  CCSCRNAA----DDDWGREPSDSRDRGSSSRGGRPDSRG-GGVNAAG 121



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>P15800:LAMB2_RAT Laminin subunit beta-2 precursor - Rattus norvegicus (Rat)|
          Length = 1801

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
 Frame = +3

Query: 108  PCLAHPKCASCRRAAPSTRDLNGEREALPLRPRGAPSHGGDPTSNS-CGDANSH----GS 272
            PCL H +  SC R AP+  +    R   P      PS    PT N   G  + H    G 
Sbjct: 1069 PCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACH--PSRARGPTCNEFTGQCHCHAGFGGR 1126

Query: 273  TRSEFAAFH 299
            T SE    H
Sbjct: 1127 TCSECQELH 1135



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>Q9D9W6:CF146_MOUSE Uncharacterized protein C6orf146 homolog - Mus musculus (Mouse)|
          Length = 419

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 35  QPTTASPQHRTCASVVARLVPDPSPLPSAPQMRELQEG-RSEHKGPK 172
           +PTT +   +  A VV+R +P  SP+P +P      E  R E K P+
Sbjct: 333 KPTTTTQATQPMARVVSRCLPPRSPMPVSPIPLSFPENPREEGKVPR 379



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>Q8BLS7:ANR43_MOUSE Ankyrin repeat domain-containing protein 43 precursor - Mus|
           musculus (Mouse)
          Length = 548

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 14  SPLGRCAQPTTASPQHRTCASVVARLVPDPSPLPSAPQMRELQEGRSEHKGPK 172
           SP    A PT   P  + C   V  +VP P+ L    + + L+  RSE   P+
Sbjct: 196 SPGPEPAPPTAQVPPQKPCMLPVRCVVPGPAALRIRAEEQGLRRQRSEEPSPR 248


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 106,003,574
Number of extensions: 2440741
Number of successful extensions: 7555
Number of sequences better than 10.0: 11
Number of HSP's gapped: 7551
Number of HSP's successfully gapped: 11
Length of query: 198
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 91
Effective length of database: 71,336,874
Effective search space: 6491655534
Effective search space used: 6491655534
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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