ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf17m18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069531.1| Oryza sativa (japonica cultivar-group) Os09g0363900 (Os09g0363900) mRNA, complete cds Length = 2026 Score = 1639 bits (827), Expect = 0.0 Identities = 1551/1791 (86%), Gaps = 6/1791 (0%) Strand = Plus / Plus Query: 201 gaatctccctcccctcgagaaggcgagcagcttccccgcgatgcgccgcgagaggtacga 260 |||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 199 gaatctccctaccctccagaaggcgagcagcttcccagcgatgcgccacgagacatacga 258 Query: 261 ctacattgtcgtcggcgggggcaccgccggctgccccctggcggccacattgtcgctcaa 320 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 259 ctacattgtcgtcggcgggggcaccgccggttgccccctggcggcgacattgtcgctcaa 318 Query: 321 gtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctccta 380 ||||||||||||| ||||||||||||| || || || ||||||||||||||| ||||||| Sbjct: 319 gtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctccta 378 Query: 381 catggagaacttccacatcggcctgagcaacacggcgccggactcttcgtcgcaggcctt 440 |||||||||||||||||| ||||||||||| | |||||||||||| |||| |||||||| Sbjct: 379 catggagaacttccacattggcctgagcaatatggcgccggactcggcgtctcaggcctt 438 Query: 441 cgtctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcat 500 | ||||||| |||||||||||||||||||| || |||||| |||| ||||| |||||||| Sbjct: 439 catctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggtggcacctgcat 498 Query: 501 caatgctggcttctacagccgagccagctcaagctttgtgcaggatgttggctgggaaga 560 |||||| |||||||||||||| |||||||||| ||| | ||||| || |||||||| || Sbjct: 499 caatgccggcttctacagccgggccagctcaaacttcatccaggaggtaggctgggatga 558 Query: 561 agacctggtgaatgagtcctacccttgggtagaggataaggttgtccagtggcctaagat 620 |||||||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||| Sbjct: 559 agacctggtgaatgagtccttcccttgggtggaggacaagatcgtccagtggcctaagat 618 Query: 621 cgcgccttggcaggctgcactgcgggatgggcttgttgaagcaggtgtatcccctttcaa 680 ||| ||||||||||||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 619 cgcaccttggcaggctgcactaagggatgggctactccaagcaggtgtatctcctttcaa 678 Query: 681 tgggtacacctatgatcatgtttctgggaccaaggttggtggcaccatctttgacgcaaa 740 ||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||| | | Sbjct: 679 tggctacacatatgaccatgtttctgggaccaaagttggtggcaccatctttgatgagac 738 Query: 741 tggccaccgccacacagcggccgacttgcttgctgctggagaccctaacaacatgagggt 800 |||| ||||||||||||| |||||||| ||||| |||||||||||||||||| | ||||| Sbjct: 739 tggctaccgccacacagcagccgacttacttgcagctggagaccctaacaacctaagggt 798 Query: 801 cctgcttcatgctagtgtgcacaagatagtgttcaactcgcagcaaggacgactgagacc 860 |||||||||||||||||| ||| |||||| || ||||||||| ||| | ||||| || Sbjct: 799 gctgcttcatgctagtgtgaacaggatagtctttaactcgcagagagggcaactgaagcc 858 Query: 861 aagggctatcggggtacaattcgccgatgaagatgggagactccaccaggcactcctcaa 920 ||| || | ||| || || ||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 859 aagagcaaccggagttcagttcaccgatgagaatggaggactccaccaggcattcctcaa 918 Query: 921 caacaacagggatagtgaggtcatcgtctcttctggtgcaattggcagtccccagctgct 980 || |||| | |||||||| |||| |||||| |||| ||||||||||| ||||||||||| Sbjct: 919 cagcaactgtgatagtgaaatcattgtctctgctggcgcaattggcagcccccagctgct 978 Query: 981 gctcctcagtgggatcgggcccaagaacgatcttaagaatcataacattcctgtggttct 1040 | ||||||||||| || |||||||| || |||| || ||||| |||||||| ||||| Sbjct: 979 attgctcagtgggattggacccaagaatgaccttaggagccataaaattcctgtagttct 1038 Query: 1041 tcacaacaagtatgtggggaaagggatggctgacaaccccatgaactccatcttcatacc 1100 || |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1039 ccataacaagtatgtgggtaaagggatggctgataaccccatgaactccatattcatacc 1098 Query: 1101 tacgaaaagcccccctcggcagtcactgattgagactgttggaatcactgaagccggtgt 1160 ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 1099 gacgaaaagcccccctcgccagtccctgattgagactgttggaataactgaagctggtgt 1158 Query: 1161 gttcatcgaggccagcagtggttttggccagtctgaaaaaagcatccactgccaccacgg 1220 |||||| |||||||| ||||||||||||||||| | |||||||||| |||||||| || Sbjct: 1159 gttcattgaggccagtagtggttttggccagtcaccagaaagcatccattgccaccatgg 1218 Query: 1221 aatcatgtctgctgagatcggacagctgtccacagttcctccgaagcaaagaagcctgga 1280 ||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1219 aatcatgtccgctgagattggacagctgtccacaattcctccgaaggaaagaagcctgga 1278 Query: 1281 actagccagggagtatgcgcataacaaacttagtctacccaaagaggtgttccaaggagg 1340 | ||| | ||||||| ||| |||||||| ||||||||||||| | ||||| || || Sbjct: 1279 aaaagcacagaagtatgcaaataccaaacttaatctacccaaagagatattccatggtgg 1338 Query: 1341 ttttatcctcgagaagatcgatggtccgctgtctacaggccatcttgtccttgctgacac 1400 |||||||||||||||||| |||||||| |||||||| || ||||||| ||| ||||| Sbjct: 1339 ttttatcctcgagaagattgatggtccactgtctacgggacatcttgccctgatagacac 1398 Query: 1401 tgatgtcaagaacaacccggcagttactttcaactatttcagccatccacaagatctcag 1460 |||||||||||| ||||| || ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 1399 tgatgtcaagaagaaccctgcggttaccttcaactacttcagtcatccacaggatctcac 1458 Query: 1461 ccgttgtgtctatggcatcaagaccattgagaaaatactgaagacaaacagtttcgctca 1520 ||||| |||||||| |||||||||||||| |||||||||||||||| ||||| || | Sbjct: 1459 tcgttgcgtctatggtatcaagaccattgaacgaatactgaagacaaaccgtttctctga 1518 Query: 1521 tctgactcctgatggtgctggatatgaaatggaaagggtgctcaacatgagcgtgcaggc 1580 ||| || | | || |||| || ||||||||| |||||||| ||||| |||||||| Sbjct: 1519 actgtctgccaacactgatggacattcaatggaaagagtgctcaatatgagtgtgcaggc 1578 Query: 1581 taatgtgaatctgatacccaagcataccaataccacagaatccctagagcaattttgcaa 1640 ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1579 taatgtgaacttgatacccaagcatacaaatgacacagaatccctagagcaattttgcag 1638 Query: 1641 ggacacggtaatcaccatctggcactaccatggtgggtgtcatgtagggaaggtggtcga 1700 ||| || ||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1639 ggatacagtaataaccatctggcactaccatggtggatgccatgtagggaaggtggttga 1698 Query: 1701 ccagcagcaccgggtgcttggagtctcagggctccgcgttgttgatggctcaacgttctc 1760 ||||| ||||| ||||||||||| ||||| |||| || || ||||||||||| || || Sbjct: 1699 tcagcaacaccgtgtgcttggagtttcaggcgtccgtgtagtcgatggctcaacattttc 1758 Query: 1761 taggtcaccagggaccaaccctcaagccacggtcatgatgatgggcaggtactttggagt 1820 ||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1759 tagatcaccagggacgaaccctcaagccacggtcatgatgatgggcagatattttggagt 1818 Query: 1821 gaagatcttaagggaacggctaggaccagcagctggagtgtagtagattcctgaacacct 1880 || |||| |||||| | | ||||| | ||||||||||||||| | |||||||| ||||| Sbjct: 1819 gatgatcctaaggggaagactaggtcgagcagctggagtgtaatcgattcctggacacca 1878 Query: 1881 gccttttatgatgtgtgtgtgacctagaaaag--aaatcactaatttttgctgggatcca 1938 ||||||| | | ||||||||||||| ||| |||| ||||||| ||||||||||| | Sbjct: 1879 gccttttgt----tatgtgtgacctagagaagaaaaattactaattattgctgggatcta 1934 Query: 1939 gtgtgaatcaccaatgtaagacagtctaggagtttcatctgtacccagtaa 1989 |||||| ||||| | | |||||| |||||||||||||||||||||||||| Sbjct: 1935 gtgtgattcaccgaagaaagacaagctaggagtttcatctgtacccagtaa 1985
>dbj|AK072899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148B06, full insert sequence Length = 2027 Score = 1639 bits (827), Expect = 0.0 Identities = 1551/1791 (86%), Gaps = 6/1791 (0%) Strand = Plus / Plus Query: 201 gaatctccctcccctcgagaaggcgagcagcttccccgcgatgcgccgcgagaggtacga 260 |||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 200 gaatctccctaccctccagaaggcgagcagcttcccagcgatgcgccacgagacatacga 259 Query: 261 ctacattgtcgtcggcgggggcaccgccggctgccccctggcggccacattgtcgctcaa 320 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 260 ctacattgtcgtcggcgggggcaccgccggttgccccctggcggcgacattgtcgctcaa 319 Query: 321 gtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctccta 380 ||||||||||||| ||||||||||||| || || || ||||||||||||||| ||||||| Sbjct: 320 gtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctccta 379 Query: 381 catggagaacttccacatcggcctgagcaacacggcgccggactcttcgtcgcaggcctt 440 |||||||||||||||||| ||||||||||| | |||||||||||| |||| |||||||| Sbjct: 380 catggagaacttccacattggcctgagcaatatggcgccggactcggcgtctcaggcctt 439 Query: 441 cgtctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcat 500 | ||||||| |||||||||||||||||||| || |||||| |||| ||||| |||||||| Sbjct: 440 catctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggtggcacctgcat 499 Query: 501 caatgctggcttctacagccgagccagctcaagctttgtgcaggatgttggctgggaaga 560 |||||| |||||||||||||| |||||||||| ||| | ||||| || |||||||| || Sbjct: 500 caatgccggcttctacagccgggccagctcaaacttcatccaggaggtaggctgggatga 559 Query: 561 agacctggtgaatgagtcctacccttgggtagaggataaggttgtccagtggcctaagat 620 |||||||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||| Sbjct: 560 agacctggtgaatgagtccttcccttgggtggaggacaagatcgtccagtggcctaagat 619 Query: 621 cgcgccttggcaggctgcactgcgggatgggcttgttgaagcaggtgtatcccctttcaa 680 ||| ||||||||||||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 620 cgcaccttggcaggctgcactaagggatgggctactccaagcaggtgtatctcctttcaa 679 Query: 681 tgggtacacctatgatcatgtttctgggaccaaggttggtggcaccatctttgacgcaaa 740 ||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||| | | Sbjct: 680 tggctacacatatgaccatgtttctgggaccaaagttggtggcaccatctttgatgagac 739 Query: 741 tggccaccgccacacagcggccgacttgcttgctgctggagaccctaacaacatgagggt 800 |||| ||||||||||||| |||||||| ||||| |||||||||||||||||| | ||||| Sbjct: 740 tggctaccgccacacagcagccgacttacttgcagctggagaccctaacaacctaagggt 799 Query: 801 cctgcttcatgctagtgtgcacaagatagtgttcaactcgcagcaaggacgactgagacc 860 |||||||||||||||||| ||| |||||| || ||||||||| ||| | ||||| || Sbjct: 800 gctgcttcatgctagtgtgaacaggatagtctttaactcgcagagagggcaactgaagcc 859 Query: 861 aagggctatcggggtacaattcgccgatgaagatgggagactccaccaggcactcctcaa 920 ||| || | ||| || || ||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 860 aagagcaaccggagttcagttcaccgatgagaatggaggactccaccaggcattcctcaa 919 Query: 921 caacaacagggatagtgaggtcatcgtctcttctggtgcaattggcagtccccagctgct 980 || |||| | |||||||| |||| |||||| |||| ||||||||||| ||||||||||| Sbjct: 920 cagcaactgtgatagtgaaatcattgtctctgctggcgcaattggcagcccccagctgct 979 Query: 981 gctcctcagtgggatcgggcccaagaacgatcttaagaatcataacattcctgtggttct 1040 | ||||||||||| || |||||||| || |||| || ||||| |||||||| ||||| Sbjct: 980 attgctcagtgggattggacccaagaatgaccttaggagccataaaattcctgtagttct 1039 Query: 1041 tcacaacaagtatgtggggaaagggatggctgacaaccccatgaactccatcttcatacc 1100 || |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1040 ccataacaagtatgtgggtaaagggatggctgataaccccatgaactccatattcatacc 1099 Query: 1101 tacgaaaagcccccctcggcagtcactgattgagactgttggaatcactgaagccggtgt 1160 ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 1100 gacgaaaagcccccctcgccagtccctgattgagactgttggaataactgaagctggtgt 1159 Query: 1161 gttcatcgaggccagcagtggttttggccagtctgaaaaaagcatccactgccaccacgg 1220 |||||| |||||||| ||||||||||||||||| | |||||||||| |||||||| || Sbjct: 1160 gttcattgaggccagtagtggttttggccagtcaccagaaagcatccattgccaccatgg 1219 Query: 1221 aatcatgtctgctgagatcggacagctgtccacagttcctccgaagcaaagaagcctgga 1280 ||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1220 aatcatgtccgctgagattggacagctgtccacaattcctccgaaggaaagaagcctgga 1279 Query: 1281 actagccagggagtatgcgcataacaaacttagtctacccaaagaggtgttccaaggagg 1340 | ||| | ||||||| ||| |||||||| ||||||||||||| | ||||| || || Sbjct: 1280 aaaagcacagaagtatgcaaataccaaacttaatctacccaaagagatattccatggtgg 1339 Query: 1341 ttttatcctcgagaagatcgatggtccgctgtctacaggccatcttgtccttgctgacac 1400 |||||||||||||||||| |||||||| |||||||| || ||||||| ||| ||||| Sbjct: 1340 ttttatcctcgagaagattgatggtccactgtctacgggacatcttgccctgatagacac 1399 Query: 1401 tgatgtcaagaacaacccggcagttactttcaactatttcagccatccacaagatctcag 1460 |||||||||||| ||||| || ||||| |||||||| ||||| |||||||| ||||||| Sbjct: 1400 tgatgtcaagaagaaccctgcggttaccttcaactacttcagtcatccacaggatctcac 1459 Query: 1461 ccgttgtgtctatggcatcaagaccattgagaaaatactgaagacaaacagtttcgctca 1520 ||||| |||||||| |||||||||||||| |||||||||||||||| ||||| || | Sbjct: 1460 tcgttgcgtctatggtatcaagaccattgaacgaatactgaagacaaaccgtttctctga 1519 Query: 1521 tctgactcctgatggtgctggatatgaaatggaaagggtgctcaacatgagcgtgcaggc 1580 ||| || | | || |||| || ||||||||| |||||||| ||||| |||||||| Sbjct: 1520 actgtctgccaacactgatggacattcaatggaaagagtgctcaatatgagtgtgcaggc 1579 Query: 1581 taatgtgaatctgatacccaagcataccaataccacagaatccctagagcaattttgcaa 1640 ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1580 taatgtgaacttgatacccaagcatacaaatgacacagaatccctagagcaattttgcag 1639 Query: 1641 ggacacggtaatcaccatctggcactaccatggtgggtgtcatgtagggaaggtggtcga 1700 ||| || ||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1640 ggatacagtaataaccatctggcactaccatggtggatgccatgtagggaaggtggttga 1699 Query: 1701 ccagcagcaccgggtgcttggagtctcagggctccgcgttgttgatggctcaacgttctc 1760 ||||| ||||| ||||||||||| ||||| |||| || || ||||||||||| || || Sbjct: 1700 tcagcaacaccgtgtgcttggagtttcaggcgtccgtgtagtcgatggctcaacattttc 1759 Query: 1761 taggtcaccagggaccaaccctcaagccacggtcatgatgatgggcaggtactttggagt 1820 ||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1760 tagatcaccagggacgaaccctcaagccacggtcatgatgatgggcagatattttggagt 1819 Query: 1821 gaagatcttaagggaacggctaggaccagcagctggagtgtagtagattcctgaacacct 1880 || |||| |||||| | | ||||| | ||||||||||||||| | |||||||| ||||| Sbjct: 1820 gatgatcctaaggggaagactaggtcgagcagctggagtgtaatcgattcctggacacca 1879 Query: 1881 gccttttatgatgtgtgtgtgacctagaaaag--aaatcactaatttttgctgggatcca 1938 ||||||| | | ||||||||||||| ||| |||| ||||||| ||||||||||| | Sbjct: 1880 gccttttgt----tatgtgtgacctagagaagaaaaattactaattattgctgggatcta 1935 Query: 1939 gtgtgaatcaccaatgtaagacagtctaggagtttcatctgtacccagtaa 1989 |||||| ||||| | | |||||| |||||||||||||||||||||||||| Sbjct: 1936 gtgtgattcaccgaagaaagacaagctaggagtttcatctgtacccagtaa 1986
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 488 bits (246), Expect = e-134 Identities = 495/578 (85%) Strand = Plus / Minus Query: 1235 agatcggacagctgtccacagttcctccgaagcaaagaagcctggaactagccagggagt 1294 |||| ||||||||||||||| ||||||||||| |||||||||||||| ||| | ||| Sbjct: 11868034 agattggacagctgtccacaattcctccgaaggaaagaagcctggaaaaagcacagaagt 11867975 Query: 1295 atgcgcataacaaacttagtctacccaaagaggtgttccaaggaggttttatcctcgaga 1354 |||| ||| |||||||| ||||||||||||| | ||||| || |||||||||||||||| Sbjct: 11867974 atgcaaataccaaacttaatctacccaaagagatattccatggtggttttatcctcgaga 11867915 Query: 1355 agatcgatggtccgctgtctacaggccatcttgtccttgctgacactgatgtcaagaaca 1414 |||| |||||||| |||||||| || ||||||| ||| ||||||||||||||||| | Sbjct: 11867914 agattgatggtccactgtctacgggacatcttgccctgatagacactgatgtcaagaaga 11867855 Query: 1415 acccggcagttactttcaactatttcagccatccacaagatctcagccgttgtgtctatg 1474 |||| || ||||| |||||||| ||||| |||||||| ||||||| ||||| ||||||| Sbjct: 11867854 accctgcggttaccttcaactacttcagtcatccacaggatctcactcgttgcgtctatg 11867795 Query: 1475 gcatcaagaccattgagaaaatactgaagacaaacagtttcgctcatctgactcctgatg 1534 | |||||||||||||| |||||||||||||||| ||||| || | ||| || | | Sbjct: 11867794 gtatcaagaccattgaacgaatactgaagacaaaccgtttctctgaactgtctgccaaca 11867735 Query: 1535 gtgctggatatgaaatggaaagggtgctcaacatgagcgtgcaggctaatgtgaatctga 1594 || |||| || ||||||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 11867734 ctgatggacattcaatggaaagagtgctcaatatgagtgtgcaggctaatgtgaacttga 11867675 Query: 1595 tacccaagcataccaataccacagaatccctagagcaattttgcaaggacacggtaatca 1654 ||||||||||||| ||| |||||||||||||||||||||||||| ||| || ||||| | Sbjct: 11867674 tacccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataa 11867615 Query: 1655 ccatctggcactaccatggtgggtgtcatgtagggaaggtggtcgaccagcagcaccggg 1714 |||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 11867614 ccatctggcactaccatggtggatgccatgtagggaaggtggttgatcagcaacaccgtg 11867555 Query: 1715 tgcttggagtctcagggctccgcgttgttgatggctcaacgttctctaggtcaccaggga 1774 |||||||||| ||||| |||| || || ||||||||||| || ||||| |||||||||| Sbjct: 11867554 tgcttggagtttcaggcgtccgtgtagtcgatggctcaacattttctagatcaccaggga 11867495 Query: 1775 ccaaccctcaagccacggtcatgatgatgggcaggtac 1812 | |||||||||||||||||||||||||||||||||||| Sbjct: 11867494 cgaaccctcaagccacggtcatgatgatgggcaggtac 11867457 Score = 428 bits (216), Expect = e-116 Identities = 303/332 (91%) Strand = Plus / Minus Query: 201 gaatctccctcccctcgagaaggcgagcagcttccccgcgatgcgccgcgagaggtacga 260 |||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 11871360 gaatctccctaccctccagaaggcgagcagcttcccagcgatgcgccacgagacatacga 11871301 Query: 261 ctacattgtcgtcggcgggggcaccgccggctgccccctggcggccacattgtcgctcaa 320 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 11871300 ctacattgtcgtcggcgggggcaccgccggttgccccctggcggcgacattgtcgctcaa 11871241 Query: 321 gtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctccta 380 ||||||||||||| ||||||||||||| || || || ||||||||||||||| ||||||| Sbjct: 11871240 gtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctccta 11871181 Query: 381 catggagaacttccacatcggcctgagcaacacggcgccggactcttcgtcgcaggcctt 440 |||||||||||||||||| ||||||||||| | |||||||||||| |||| |||||||| Sbjct: 11871180 catggagaacttccacattggcctgagcaatatggcgccggactcggcgtctcaggcctt 11871121 Query: 441 cgtctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcat 500 | ||||||| |||||||||||||||||||| || |||||| |||| ||||| |||||||| Sbjct: 11871120 catctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggtggcacctgcat 11871061 Query: 501 caatgctggcttctacagccgagccagctcaa 532 |||||| |||||||||||||| |||||||||| Sbjct: 11871060 caatgccggcttctacagccgggccagctcaa 11871029 Score = 345 bits (174), Expect = 4e-91 Identities = 297/338 (87%) Strand = Plus / Minus Query: 899 gactccaccaggcactcctcaacaacaacagggatagtgaggtcatcgtctcttctggtg 958 |||||||||||||| ||||||||| |||| | |||||||| |||| |||||| |||| | Sbjct: 11868822 gactccaccaggcattcctcaacagcaactgtgatagtgaaatcattgtctctgctggcg 11868763 Query: 959 caattggcagtccccagctgctgctcctcagtgggatcgggcccaagaacgatcttaaga 1018 |||||||||| ||||||||||| | ||||||||||| || |||||||| || |||| || Sbjct: 11868762 caattggcagcccccagctgctattgctcagtgggattggacccaagaatgaccttagga 11868703 Query: 1019 atcataacattcctgtggttcttcacaacaagtatgtggggaaagggatggctgacaacc 1078 ||||| |||||||| ||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 11868702 gccataaaattcctgtagttctccataacaagtatgtgggtaaagggatggctgataacc 11868643 Query: 1079 ccatgaactccatcttcatacctacgaaaagcccccctcggcagtcactgattgagactg 1138 ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 11868642 ccatgaactccatattcataccgacgaaaagcccccctcgccagtccctgattgagactg 11868583 Query: 1139 ttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttggccagtctgaaa 1198 ||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||| | Sbjct: 11868582 ttggaataactgaagctggtgtgttcattgaggccagtagtggttttggccagtcaccag 11868523 Query: 1199 aaagcatccactgccaccacggaatcatgtctgctgag 1236 |||||||||| |||||||| ||||||||||| |||||| Sbjct: 11868522 aaagcatccattgccaccatggaatcatgtccgctgag 11868485 Score = 323 bits (163), Expect = 1e-84 Identities = 268/303 (88%) Strand = Plus / Minus Query: 541 caggatgttggctgggaagaagacctggtgaatgagtcctacccttgggtagaggataag 600 ||||| || |||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 11869324 caggaggtaggctgggatgaagacctggtgaatgagtccttcccttgggtggaggacaag 11869265 Query: 601 gttgtccagtggcctaagatcgcgccttggcaggctgcactgcgggatgggcttgttgaa 660 | |||||||||||||||||||| ||||||||||||||||| |||||||||| | || Sbjct: 11869264 atcgtccagtggcctaagatcgcaccttggcaggctgcactaagggatgggctactccaa 11869205 Query: 661 gcaggtgtatcccctttcaatgggtacacctatgatcatgtttctgggaccaaggttggt 720 ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 11869204 gcaggtgtatctcctttcaatggctacacatatgaccatgtttctgggaccaaagttggt 11869145 Query: 721 ggcaccatctttgacgcaaatggccaccgccacacagcggccgacttgcttgctgctgga 780 |||||||||||||| | | |||| ||||||||||||| |||||||| ||||| |||||| Sbjct: 11869144 ggcaccatctttgatgagactggctaccgccacacagcagccgacttacttgcagctgga 11869085 Query: 781 gaccctaacaacatgagggtcctgcttcatgctagtgtgcacaagatagtgttcaactcg 840 |||||||||||| | ||||| |||||||||||||||||| ||| |||||| || |||||| Sbjct: 11869084 gaccctaacaacctaagggtgctgcttcatgctagtgtgaacaggatagtctttaactcg 11869025 Query: 841 cag 843 ||| Sbjct: 11869024 cag 11869022 Score = 117 bits (59), Expect = 2e-22 Identities = 150/179 (83%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 1813 tttggagtgaagatcttaagggaacggctaggaccagcagctggagtgtagtagattcct 1872 |||||||||| |||| |||||| | | ||||| | ||||||||||||||| | ||||||| Sbjct: 11867352 tttggagtgatgatcctaaggggaagactaggtcgagcagctggagtgtaatcgattcct 11867293 Query: 1873 gaacacctgccttttatgatgtgtgtgtgacctagaaaag--aaatcactaatttttgct 1930 | ||||| ||||||| | | ||||||||||||| ||| |||| ||||||| ||||| Sbjct: 11867292 ggacaccagccttttgt----tatgtgtgacctagagaagaaaaattactaattattgct 11867237 Query: 1931 gggatccagtgtgaatcaccaatgtaagacagtctaggagtttcatctgtacccagtaa 1989 |||||| ||||||| ||||| | | |||||| |||||||||||||||||||||||||| Sbjct: 11867236 gggatctagtgtgattcaccgaagaaagacaagctaggagtttcatctgtacccagtaa 11867178
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 488 bits (246), Expect = e-134 Identities = 495/578 (85%) Strand = Plus / Minus Query: 1235 agatcggacagctgtccacagttcctccgaagcaaagaagcctggaactagccagggagt 1294 |||| ||||||||||||||| ||||||||||| |||||||||||||| ||| | ||| Sbjct: 49524 agattggacagctgtccacaattcctccgaaggaaagaagcctggaaaaagcacagaagt 49465 Query: 1295 atgcgcataacaaacttagtctacccaaagaggtgttccaaggaggttttatcctcgaga 1354 |||| ||| |||||||| ||||||||||||| | ||||| || |||||||||||||||| Sbjct: 49464 atgcaaataccaaacttaatctacccaaagagatattccatggtggttttatcctcgaga 49405 Query: 1355 agatcgatggtccgctgtctacaggccatcttgtccttgctgacactgatgtcaagaaca 1414 |||| |||||||| |||||||| || ||||||| ||| ||||||||||||||||| | Sbjct: 49404 agattgatggtccactgtctacgggacatcttgccctgatagacactgatgtcaagaaga 49345 Query: 1415 acccggcagttactttcaactatttcagccatccacaagatctcagccgttgtgtctatg 1474 |||| || ||||| |||||||| ||||| |||||||| ||||||| ||||| ||||||| Sbjct: 49344 accctgcggttaccttcaactacttcagtcatccacaggatctcactcgttgcgtctatg 49285 Query: 1475 gcatcaagaccattgagaaaatactgaagacaaacagtttcgctcatctgactcctgatg 1534 | |||||||||||||| |||||||||||||||| ||||| || | ||| || | | Sbjct: 49284 gtatcaagaccattgaacgaatactgaagacaaaccgtttctctgaactgtctgccaaca 49225 Query: 1535 gtgctggatatgaaatggaaagggtgctcaacatgagcgtgcaggctaatgtgaatctga 1594 || |||| || ||||||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 49224 ctgatggacattcaatggaaagagtgctcaatatgagtgtgcaggctaatgtgaacttga 49165 Query: 1595 tacccaagcataccaataccacagaatccctagagcaattttgcaaggacacggtaatca 1654 ||||||||||||| ||| |||||||||||||||||||||||||| ||| || ||||| | Sbjct: 49164 tacccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataa 49105 Query: 1655 ccatctggcactaccatggtgggtgtcatgtagggaaggtggtcgaccagcagcaccggg 1714 |||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 49104 ccatctggcactaccatggtggatgccatgtagggaaggtggttgatcagcaacaccgtg 49045 Query: 1715 tgcttggagtctcagggctccgcgttgttgatggctcaacgttctctaggtcaccaggga 1774 |||||||||| ||||| |||| || || ||||||||||| || ||||| |||||||||| Sbjct: 49044 tgcttggagtttcaggcgtccgtgtagtcgatggctcaacattttctagatcaccaggga 48985 Query: 1775 ccaaccctcaagccacggtcatgatgatgggcaggtac 1812 | |||||||||||||||||||||||||||||||||||| Sbjct: 48984 cgaaccctcaagccacggtcatgatgatgggcaggtac 48947 Score = 428 bits (216), Expect = e-116 Identities = 303/332 (91%) Strand = Plus / Minus Query: 201 gaatctccctcccctcgagaaggcgagcagcttccccgcgatgcgccgcgagaggtacga 260 |||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 52850 gaatctccctaccctccagaaggcgagcagcttcccagcgatgcgccacgagacatacga 52791 Query: 261 ctacattgtcgtcggcgggggcaccgccggctgccccctggcggccacattgtcgctcaa 320 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 52790 ctacattgtcgtcggcgggggcaccgccggttgccccctggcggcgacattgtcgctcaa 52731 Query: 321 gtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctccta 380 ||||||||||||| ||||||||||||| || || || ||||||||||||||| ||||||| Sbjct: 52730 gtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctccta 52671 Query: 381 catggagaacttccacatcggcctgagcaacacggcgccggactcttcgtcgcaggcctt 440 |||||||||||||||||| ||||||||||| | |||||||||||| |||| |||||||| Sbjct: 52670 catggagaacttccacattggcctgagcaatatggcgccggactcggcgtctcaggcctt 52611 Query: 441 cgtctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcat 500 | ||||||| |||||||||||||||||||| || |||||| |||| ||||| |||||||| Sbjct: 52610 catctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggtggcacctgcat 52551 Query: 501 caatgctggcttctacagccgagccagctcaa 532 |||||| |||||||||||||| |||||||||| Sbjct: 52550 caatgccggcttctacagccgggccagctcaa 52519 Score = 345 bits (174), Expect = 4e-91 Identities = 297/338 (87%) Strand = Plus / Minus Query: 899 gactccaccaggcactcctcaacaacaacagggatagtgaggtcatcgtctcttctggtg 958 |||||||||||||| ||||||||| |||| | |||||||| |||| |||||| |||| | Sbjct: 50312 gactccaccaggcattcctcaacagcaactgtgatagtgaaatcattgtctctgctggcg 50253 Query: 959 caattggcagtccccagctgctgctcctcagtgggatcgggcccaagaacgatcttaaga 1018 |||||||||| ||||||||||| | ||||||||||| || |||||||| || |||| || Sbjct: 50252 caattggcagcccccagctgctattgctcagtgggattggacccaagaatgaccttagga 50193 Query: 1019 atcataacattcctgtggttcttcacaacaagtatgtggggaaagggatggctgacaacc 1078 ||||| |||||||| ||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 50192 gccataaaattcctgtagttctccataacaagtatgtgggtaaagggatggctgataacc 50133 Query: 1079 ccatgaactccatcttcatacctacgaaaagcccccctcggcagtcactgattgagactg 1138 ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 50132 ccatgaactccatattcataccgacgaaaagcccccctcgccagtccctgattgagactg 50073 Query: 1139 ttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttggccagtctgaaa 1198 ||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||| | Sbjct: 50072 ttggaataactgaagctggtgtgttcattgaggccagtagtggttttggccagtcaccag 50013 Query: 1199 aaagcatccactgccaccacggaatcatgtctgctgag 1236 |||||||||| |||||||| ||||||||||| |||||| Sbjct: 50012 aaagcatccattgccaccatggaatcatgtccgctgag 49975 Score = 323 bits (163), Expect = 1e-84 Identities = 268/303 (88%) Strand = Plus / Minus Query: 541 caggatgttggctgggaagaagacctggtgaatgagtcctacccttgggtagaggataag 600 ||||| || |||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 50814 caggaggtaggctgggatgaagacctggtgaatgagtccttcccttgggtggaggacaag 50755 Query: 601 gttgtccagtggcctaagatcgcgccttggcaggctgcactgcgggatgggcttgttgaa 660 | |||||||||||||||||||| ||||||||||||||||| |||||||||| | || Sbjct: 50754 atcgtccagtggcctaagatcgcaccttggcaggctgcactaagggatgggctactccaa 50695 Query: 661 gcaggtgtatcccctttcaatgggtacacctatgatcatgtttctgggaccaaggttggt 720 ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 50694 gcaggtgtatctcctttcaatggctacacatatgaccatgtttctgggaccaaagttggt 50635 Query: 721 ggcaccatctttgacgcaaatggccaccgccacacagcggccgacttgcttgctgctgga 780 |||||||||||||| | | |||| ||||||||||||| |||||||| ||||| |||||| Sbjct: 50634 ggcaccatctttgatgagactggctaccgccacacagcagccgacttacttgcagctgga 50575 Query: 781 gaccctaacaacatgagggtcctgcttcatgctagtgtgcacaagatagtgttcaactcg 840 |||||||||||| | ||||| |||||||||||||||||| ||| |||||| || |||||| Sbjct: 50574 gaccctaacaacctaagggtgctgcttcatgctagtgtgaacaggatagtctttaactcg 50515 Query: 841 cag 843 ||| Sbjct: 50514 cag 50512 Score = 117 bits (59), Expect = 2e-22 Identities = 150/179 (83%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 1813 tttggagtgaagatcttaagggaacggctaggaccagcagctggagtgtagtagattcct 1872 |||||||||| |||| |||||| | | ||||| | ||||||||||||||| | ||||||| Sbjct: 48842 tttggagtgatgatcctaaggggaagactaggtcgagcagctggagtgtaatcgattcct 48783 Query: 1873 gaacacctgccttttatgatgtgtgtgtgacctagaaaag--aaatcactaatttttgct 1930 | ||||| ||||||| | | ||||||||||||| ||| |||| ||||||| ||||| Sbjct: 48782 ggacaccagccttttgt----tatgtgtgacctagagaagaaaaattactaattattgct 48727 Query: 1931 gggatccagtgtgaatcaccaatgtaagacagtctaggagtttcatctgtacccagtaa 1989 |||||| ||||||| ||||| | | |||||| |||||||||||||||||||||||||| Sbjct: 48726 gggatctagtgtgattcaccgaagaaagacaagctaggagtttcatctgtacccagtaa 48668
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 488 bits (246), Expect = e-134 Identities = 495/578 (85%) Strand = Plus / Minus Query: 1235 agatcggacagctgtccacagttcctccgaagcaaagaagcctggaactagccagggagt 1294 |||| ||||||||||||||| ||||||||||| |||||||||||||| ||| | ||| Sbjct: 110852 agattggacagctgtccacaattcctccgaaggaaagaagcctggaaaaagcacagaagt 110793 Query: 1295 atgcgcataacaaacttagtctacccaaagaggtgttccaaggaggttttatcctcgaga 1354 |||| ||| |||||||| ||||||||||||| | ||||| || |||||||||||||||| Sbjct: 110792 atgcaaataccaaacttaatctacccaaagagatattccatggtggttttatcctcgaga 110733 Query: 1355 agatcgatggtccgctgtctacaggccatcttgtccttgctgacactgatgtcaagaaca 1414 |||| |||||||| |||||||| || ||||||| ||| ||||||||||||||||| | Sbjct: 110732 agattgatggtccactgtctacgggacatcttgccctgatagacactgatgtcaagaaga 110673 Query: 1415 acccggcagttactttcaactatttcagccatccacaagatctcagccgttgtgtctatg 1474 |||| || ||||| |||||||| ||||| |||||||| ||||||| ||||| ||||||| Sbjct: 110672 accctgcggttaccttcaactacttcagtcatccacaggatctcactcgttgcgtctatg 110613 Query: 1475 gcatcaagaccattgagaaaatactgaagacaaacagtttcgctcatctgactcctgatg 1534 | |||||||||||||| |||||||||||||||| ||||| || | ||| || | | Sbjct: 110612 gtatcaagaccattgaacgaatactgaagacaaaccgtttctctgaactgtctgccaaca 110553 Query: 1535 gtgctggatatgaaatggaaagggtgctcaacatgagcgtgcaggctaatgtgaatctga 1594 || |||| || ||||||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 110552 ctgatggacattcaatggaaagagtgctcaatatgagtgtgcaggctaatgtgaacttga 110493 Query: 1595 tacccaagcataccaataccacagaatccctagagcaattttgcaaggacacggtaatca 1654 ||||||||||||| ||| |||||||||||||||||||||||||| ||| || ||||| | Sbjct: 110492 tacccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataa 110433 Query: 1655 ccatctggcactaccatggtgggtgtcatgtagggaaggtggtcgaccagcagcaccggg 1714 |||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 110432 ccatctggcactaccatggtggatgccatgtagggaaggtggttgatcagcaacaccgtg 110373 Query: 1715 tgcttggagtctcagggctccgcgttgttgatggctcaacgttctctaggtcaccaggga 1774 |||||||||| ||||| |||| || || ||||||||||| || ||||| |||||||||| Sbjct: 110372 tgcttggagtttcaggcgtccgtgtagtcgatggctcaacattttctagatcaccaggga 110313 Query: 1775 ccaaccctcaagccacggtcatgatgatgggcaggtac 1812 | |||||||||||||||||||||||||||||||||||| Sbjct: 110312 cgaaccctcaagccacggtcatgatgatgggcaggtac 110275 Score = 428 bits (216), Expect = e-116 Identities = 303/332 (91%) Strand = Plus / Minus Query: 201 gaatctccctcccctcgagaaggcgagcagcttccccgcgatgcgccgcgagaggtacga 260 |||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 114178 gaatctccctaccctccagaaggcgagcagcttcccagcgatgcgccacgagacatacga 114119 Query: 261 ctacattgtcgtcggcgggggcaccgccggctgccccctggcggccacattgtcgctcaa 320 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 114118 ctacattgtcgtcggcgggggcaccgccggttgccccctggcggcgacattgtcgctcaa 114059 Query: 321 gtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctccta 380 ||||||||||||| ||||||||||||| || || || ||||||||||||||| ||||||| Sbjct: 114058 gtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctccta 113999 Query: 381 catggagaacttccacatcggcctgagcaacacggcgccggactcttcgtcgcaggcctt 440 |||||||||||||||||| ||||||||||| | |||||||||||| |||| |||||||| Sbjct: 113998 catggagaacttccacattggcctgagcaatatggcgccggactcggcgtctcaggcctt 113939 Query: 441 cgtctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcat 500 | ||||||| |||||||||||||||||||| || |||||| |||| ||||| |||||||| Sbjct: 113938 catctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggtggcacctgcat 113879 Query: 501 caatgctggcttctacagccgagccagctcaa 532 |||||| |||||||||||||| |||||||||| Sbjct: 113878 caatgccggcttctacagccgggccagctcaa 113847 Score = 345 bits (174), Expect = 4e-91 Identities = 297/338 (87%) Strand = Plus / Minus Query: 899 gactccaccaggcactcctcaacaacaacagggatagtgaggtcatcgtctcttctggtg 958 |||||||||||||| ||||||||| |||| | |||||||| |||| |||||| |||| | Sbjct: 111640 gactccaccaggcattcctcaacagcaactgtgatagtgaaatcattgtctctgctggcg 111581 Query: 959 caattggcagtccccagctgctgctcctcagtgggatcgggcccaagaacgatcttaaga 1018 |||||||||| ||||||||||| | ||||||||||| || |||||||| || |||| || Sbjct: 111580 caattggcagcccccagctgctattgctcagtgggattggacccaagaatgaccttagga 111521 Query: 1019 atcataacattcctgtggttcttcacaacaagtatgtggggaaagggatggctgacaacc 1078 ||||| |||||||| ||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 111520 gccataaaattcctgtagttctccataacaagtatgtgggtaaagggatggctgataacc 111461 Query: 1079 ccatgaactccatcttcatacctacgaaaagcccccctcggcagtcactgattgagactg 1138 ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 111460 ccatgaactccatattcataccgacgaaaagcccccctcgccagtccctgattgagactg 111401 Query: 1139 ttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttggccagtctgaaa 1198 ||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||| | Sbjct: 111400 ttggaataactgaagctggtgtgttcattgaggccagtagtggttttggccagtcaccag 111341 Query: 1199 aaagcatccactgccaccacggaatcatgtctgctgag 1236 |||||||||| |||||||| ||||||||||| |||||| Sbjct: 111340 aaagcatccattgccaccatggaatcatgtccgctgag 111303 Score = 323 bits (163), Expect = 1e-84 Identities = 268/303 (88%) Strand = Plus / Minus Query: 541 caggatgttggctgggaagaagacctggtgaatgagtcctacccttgggtagaggataag 600 ||||| || |||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 112142 caggaggtaggctgggatgaagacctggtgaatgagtccttcccttgggtggaggacaag 112083 Query: 601 gttgtccagtggcctaagatcgcgccttggcaggctgcactgcgggatgggcttgttgaa 660 | |||||||||||||||||||| ||||||||||||||||| |||||||||| | || Sbjct: 112082 atcgtccagtggcctaagatcgcaccttggcaggctgcactaagggatgggctactccaa 112023 Query: 661 gcaggtgtatcccctttcaatgggtacacctatgatcatgtttctgggaccaaggttggt 720 ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 112022 gcaggtgtatctcctttcaatggctacacatatgaccatgtttctgggaccaaagttggt 111963 Query: 721 ggcaccatctttgacgcaaatggccaccgccacacagcggccgacttgcttgctgctgga 780 |||||||||||||| | | |||| ||||||||||||| |||||||| ||||| |||||| Sbjct: 111962 ggcaccatctttgatgagactggctaccgccacacagcagccgacttacttgcagctgga 111903 Query: 781 gaccctaacaacatgagggtcctgcttcatgctagtgtgcacaagatagtgttcaactcg 840 |||||||||||| | ||||| |||||||||||||||||| ||| |||||| || |||||| Sbjct: 111902 gaccctaacaacctaagggtgctgcttcatgctagtgtgaacaggatagtctttaactcg 111843 Query: 841 cag 843 ||| Sbjct: 111842 cag 111840 Score = 117 bits (59), Expect = 2e-22 Identities = 150/179 (83%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 1813 tttggagtgaagatcttaagggaacggctaggaccagcagctggagtgtagtagattcct 1872 |||||||||| |||| |||||| | | ||||| | ||||||||||||||| | ||||||| Sbjct: 110170 tttggagtgatgatcctaaggggaagactaggtcgagcagctggagtgtaatcgattcct 110111 Query: 1873 gaacacctgccttttatgatgtgtgtgtgacctagaaaag--aaatcactaatttttgct 1930 | ||||| ||||||| | | ||||||||||||| ||| |||| ||||||| ||||| Sbjct: 110110 ggacaccagccttttgt----tatgtgtgacctagagaagaaaaattactaattattgct 110055 Query: 1931 gggatccagtgtgaatcaccaatgtaagacagtctaggagtttcatctgtacccagtaa 1989 |||||| ||||||| ||||| | | |||||| |||||||||||||||||||||||||| Sbjct: 110054 gggatctagtgtgattcaccgaagaaagacaagctaggagtttcatctgtacccagtaa 109996
>ref|NM_001068292.1| Oryza sativa (japonica cultivar-group) Os08g0401500 (Os08g0401500) mRNA, complete cds Length = 2112 Score = 125 bits (63), Expect = 7e-25 Identities = 261/327 (79%) Strand = Plus / Plus Query: 947 tctcttctggtgcaattggcagtccccagctgctgctcctcagtgggatcgggcccaaga 1006 ||||| ||||||||||||||||||||||||| || | || ||||| || || |||| | Sbjct: 987 tctctgctggtgcaattggcagtccccagctattgttgcttagtggaattggacccagaa 1046 Query: 1007 acgatcttaagaatcataacattcctgtggttcttcacaacaagtatgtggggaaaggga 1066 | || ||||| || ||||||||| |||| || |||| |||| | ||||||| ||||||| Sbjct: 1047 aggaacttaaaaagcataacatttctgtagtccttcgcaacgaacatgtgggtaaaggga 1106 Query: 1067 tggctgacaaccccatgaactccatcttcatacctacgaaaagcccccctcggcagtcac 1126 || | || || || ||||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 1107 tgtcagataatccaatgaattccatctttatacctaccaaggatgcccctaagcaatcac 1166 Query: 1127 tgattgagactgttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttg 1186 ||||| ||||||||||||| || || | ||| | |||||| || |||||||||||||| Sbjct: 1167 tgattcagactgttggaataaccgacggcggggcgttcatagaagccagcagtggtttca 1226 Query: 1187 gccagtctgaaaaaagcatccactgccaccacggaatcatgtctgctgagatcggacagc 1246 ||||||| | | || ||||| |||||||| ||||||||||| |||||||| || |||| Sbjct: 1227 gccagtcaccagatagtatccagtgccaccatggaatcatgtccgctgagattgggcagc 1286 Query: 1247 tgtccacagttcctccgaagcaaagaa 1273 |||| || |||| || |||||||||| Sbjct: 1287 tgtcaacgattcccccaaagcaaagaa 1313 Score = 111 bits (56), Expect = 1e-20 Identities = 164/200 (82%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactaccatggtgggtgtcatgta 1686 ||||| ||||||| ||||| || ||||||||||||| |||||||| || || ||||| Sbjct: 1667 gagcagttttgcagagacacagtggtcaccatctggcattaccatggcggatgccatgtg 1726 Query: 1687 gggaaggtggtcgaccagcagcaccgggtgcttggagtctcagggctccgcgttgttgat 1746 || |||||||| ||||| || |||| ||| |||| |||||||| || || || | ||| Sbjct: 1727 ggcaaggtggttgaccaacaataccgtgtgattggtgtctcaggccttcgtgtgatcgat 1786 Query: 1747 ggctcaacgttctctaggtcaccagggaccaaccctcaagccacggtcatgatgatgggc 1806 || || || || | |||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1787 gggtcgaccttatttaggtcaccaggaaccaacccgcaagccacagtcatgatgatgggc 1846 Query: 1807 aggtactttggagtgaagat 1826 || ||| | ||||||||||| Sbjct: 1847 agatacatgggagtgaagat 1866 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 1453 gatctcagccgttgtgtctatggcatcaagaccattgagaaaatactgaagacaaacagt 1512 |||||||| || ||||||||||| ||||||||||| |||| |||||||||||||||| | Sbjct: 1493 gatctcagtcggtgtgtctatgggatcaagaccatagagagaatactgaagacaaaccat 1552 Query: 1513 ttcgctcatctgactcctgatggtgctggatatgaaatggaaagggtgctcaacatgag 1571 ||| || || | || | |||||| ||||||| ||||||| ||||||||||||||| Sbjct: 1553 ttcactaattttaccctcaatggtggtggatatccaatggaagtggtgctcaacatgag 1611 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 628 tggcaggctgcactgcgggatgggcttgttgaagcaggtgtatcccctttcaatgggtac 687 ||||| |||||||||||||| ||||| |||||||||| || || |||| |||||| ||| Sbjct: 668 tggcaagctgcactgcgggacgggctgcttgaagcaggggtctcaccttacaatggatac 727 Query: 688 acctatgatcat 699 | |||||||||| Sbjct: 728 agctatgatcat 739 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 443 tctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcatca 502 ||||||| || || ||||||||||||||||||| ||| || || ||||| || | ||| Sbjct: 483 tctccactgatggtgtcatcaatgcccgggcaaaggttctaggtggtggaactagtgtca 542 Query: 503 atgctggcttctacagccgagc 524 ||||||| |||||||||||||| Sbjct: 543 atgctggtttctacagccgagc 564 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 319 aagtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctcc 378 ||||||||||||||| ||||||| || || || || ||||| |||||||| |||||||| Sbjct: 359 aagtacaaggtgctcttgctggaaagaggagggtctccttacggcaaccggaacatctca 418 Query: 379 tacatggagaacttccacat 398 | | |||||||||||||| Sbjct: 419 catcttgagaacttccacat 438
>dbj|AK068301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146O05, full insert sequence Length = 2115 Score = 125 bits (63), Expect = 7e-25 Identities = 261/327 (79%) Strand = Plus / Plus Query: 947 tctcttctggtgcaattggcagtccccagctgctgctcctcagtgggatcgggcccaaga 1006 ||||| ||||||||||||||||||||||||| || | || ||||| || || |||| | Sbjct: 990 tctctgctggtgcaattggcagtccccagctattgttgcttagtggaattggacccagaa 1049 Query: 1007 acgatcttaagaatcataacattcctgtggttcttcacaacaagtatgtggggaaaggga 1066 | || ||||| || ||||||||| |||| || |||| |||| | ||||||| ||||||| Sbjct: 1050 aggaacttaaaaagcataacatttctgtagtccttcgcaacgaacatgtgggtaaaggga 1109 Query: 1067 tggctgacaaccccatgaactccatcttcatacctacgaaaagcccccctcggcagtcac 1126 || | || || || ||||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 1110 tgtcagataatccaatgaattccatctttatacctaccaaggatgcccctaagcaatcac 1169 Query: 1127 tgattgagactgttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttg 1186 ||||| ||||||||||||| || || | ||| | |||||| || |||||||||||||| Sbjct: 1170 tgattcagactgttggaataaccgacggcggggcgttcatagaagccagcagtggtttca 1229 Query: 1187 gccagtctgaaaaaagcatccactgccaccacggaatcatgtctgctgagatcggacagc 1246 ||||||| | | || ||||| |||||||| ||||||||||| |||||||| || |||| Sbjct: 1230 gccagtcaccagatagtatccagtgccaccatggaatcatgtccgctgagattgggcagc 1289 Query: 1247 tgtccacagttcctccgaagcaaagaa 1273 |||| || |||| || |||||||||| Sbjct: 1290 tgtcaacgattcccccaaagcaaagaa 1316 Score = 111 bits (56), Expect = 1e-20 Identities = 164/200 (82%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactaccatggtgggtgtcatgta 1686 ||||| ||||||| ||||| || ||||||||||||| |||||||| || || ||||| Sbjct: 1670 gagcagttttgcagagacacagtggtcaccatctggcattaccatggcggatgccatgtg 1729 Query: 1687 gggaaggtggtcgaccagcagcaccgggtgcttggagtctcagggctccgcgttgttgat 1746 || |||||||| ||||| || |||| ||| |||| |||||||| || || || | ||| Sbjct: 1730 ggcaaggtggttgaccaacaataccgtgtgattggtgtctcaggccttcgtgtgatcgat 1789 Query: 1747 ggctcaacgttctctaggtcaccagggaccaaccctcaagccacggtcatgatgatgggc 1806 || || || || | |||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1790 gggtcgaccttatttaggtcaccaggaaccaacccgcaagccacagtcatgatgatgggc 1849 Query: 1807 aggtactttggagtgaagat 1826 || ||| | ||||||||||| Sbjct: 1850 agatacatgggagtgaagat 1869 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 1453 gatctcagccgttgtgtctatggcatcaagaccattgagaaaatactgaagacaaacagt 1512 |||||||| || ||||||||||| ||||||||||| |||| |||||||||||||||| | Sbjct: 1496 gatctcagtcggtgtgtctatgggatcaagaccatagagagaatactgaagacaaaccat 1555 Query: 1513 ttcgctcatctgactcctgatggtgctggatatgaaatggaaagggtgctcaacatgag 1571 ||| || || | || | |||||| ||||||| ||||||| ||||||||||||||| Sbjct: 1556 ttcactaattttaccctcaatggtggtggatatccaatggaagtggtgctcaacatgag 1614 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 628 tggcaggctgcactgcgggatgggcttgttgaagcaggtgtatcccctttcaatgggtac 687 ||||| |||||||||||||| ||||| |||||||||| || || |||| |||||| ||| Sbjct: 671 tggcaagctgcactgcgggacgggctgcttgaagcaggggtctcaccttacaatggatac 730 Query: 688 acctatgatcat 699 | |||||||||| Sbjct: 731 agctatgatcat 742 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 443 tctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcatca 502 ||||||| || || ||||||||||||||||||| ||| || || ||||| || | ||| Sbjct: 486 tctccactgatggtgtcatcaatgcccgggcaaaggttctaggtggtggaactagtgtca 545 Query: 503 atgctggcttctacagccgagc 524 ||||||| |||||||||||||| Sbjct: 546 atgctggtttctacagccgagc 567 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 319 aagtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctcc 378 ||||||||||||||| ||||||| || || || || ||||| |||||||| |||||||| Sbjct: 362 aagtacaaggtgctcttgctggaaagaggagggtctccttacggcaaccggaacatctca 421 Query: 379 tacatggagaacttccacat 398 | | |||||||||||||| Sbjct: 422 catcttgagaacttccacat 441
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 107 bits (54), Expect = 2e-19 Identities = 231/290 (79%) Strand = Plus / Minus Query: 947 tctcttctggtgcaattggcagtccccagctgctgctcctcagtgggatcgggcccaaga 1006 ||||| ||||||||||||||||||||||||| || | || ||||| || || |||| | Sbjct: 19151663 tctctgctggtgcaattggcagtccccagctattgttgcttagtggaattggacccagaa 19151604 Query: 1007 acgatcttaagaatcataacattcctgtggttcttcacaacaagtatgtggggaaaggga 1066 | || ||||| || ||||||||| |||| || |||| |||| | ||||||| ||||||| Sbjct: 19151603 aggaacttaaaaagcataacatttctgtagtccttcgcaacgaacatgtgggtaaaggga 19151544 Query: 1067 tggctgacaaccccatgaactccatcttcatacctacgaaaagcccccctcggcagtcac 1126 || | || || || ||||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 19151543 tgtcagataatccaatgaattccatctttatacctaccaaggatgcccctaagcaatcac 19151484 Query: 1127 tgattgagactgttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttg 1186 ||||| ||||||||||||| || || | ||| | |||||| || |||||||||||||| Sbjct: 19151483 tgattcagactgttggaataaccgacggcggggcgttcatagaagccagcagtggtttca 19151424 Query: 1187 gccagtctgaaaaaagcatccactgccaccacggaatcatgtctgctgag 1236 ||||||| | | || ||||| |||||||| ||||||||||| |||||| Sbjct: 19151423 gccagtcaccagatagtatccagtgccaccatggaatcatgtccgctgag 19151374 Score = 105 bits (53), Expect = 6e-19 Identities = 152/185 (82%) Strand = Plus / Minus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactaccatggtgggtgtcatgta 1686 ||||| ||||||| ||||| || ||||||||||||| |||||||| || || ||||| Sbjct: 19150506 gagcagttttgcagagacacagtggtcaccatctggcattaccatggcggatgccatgtg 19150447 Query: 1687 gggaaggtggtcgaccagcagcaccgggtgcttggagtctcagggctccgcgttgttgat 1746 || |||||||| ||||| || |||| ||| |||| |||||||| || || || | ||| Sbjct: 19150446 ggcaaggtggttgaccaacaataccgtgtgattggtgtctcaggccttcgtgtgatcgat 19150387 Query: 1747 ggctcaacgttctctaggtcaccagggaccaaccctcaagccacggtcatgatgatgggc 1806 || || || || | |||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 19150386 gggtcgaccttatttaggtcaccaggaaccaacccgcaagccacagtcatgatgatgggc 19150327 Query: 1807 aggta 1811 ||||| Sbjct: 19150326 aggta 19150322 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Minus Query: 1453 gatctcagccgttgtgtctatggcatcaagaccattgagaaaatactgaagacaaacagt 1512 |||||||| || ||||||||||| ||||||||||| |||| |||||||||||||||| | Sbjct: 19150680 gatctcagtcggtgtgtctatgggatcaagaccatagagagaatactgaagacaaaccat 19150621 Query: 1513 ttcgctcatctgactcctgatggtgctggatatgaaatggaaagggtgctcaacatgag 1571 ||| || || | || | |||||| ||||||| ||||||| ||||||||||||||| Sbjct: 19150620 ttcactaattttaccctcaatggtggtggatatccaatggaagtggtgctcaacatgag 19150562 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 628 tggcaggctgcactgcgggatgggcttgttgaagcaggtgtatcccctttcaatgggtac 687 ||||| |||||||||||||| ||||| |||||||||| || || |||| |||||| ||| Sbjct: 19152069 tggcaagctgcactgcgggacgggctgcttgaagcaggggtctcaccttacaatggatac 19152010 Query: 688 acctatgatcat 699 | |||||||||| Sbjct: 19152009 agctatgatcat 19151998 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 443 tctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcatca 502 ||||||| || || ||||||||||||||||||| ||| || || ||||| || | ||| Sbjct: 19153541 tctccactgatggtgtcatcaatgcccgggcaaaggttctaggtggtggaactagtgtca 19153482 Query: 503 atgctggcttctacagccgagc 524 ||||||| |||||||||||||| Sbjct: 19153481 atgctggtttctacagccgagc 19153460 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 319 aagtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctcc 378 ||||||||||||||| ||||||| || || || || ||||| |||||||| |||||||| Sbjct: 19153665 aagtacaaggtgctcttgctggaaagaggagggtctccttacggcaaccggaacatctca 19153606 Query: 379 tacatggagaacttccacat 398 | | |||||||||||||| Sbjct: 19153605 catcttgagaacttccacat 19153586
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 107 bits (54), Expect = 2e-19 Identities = 231/290 (79%) Strand = Plus / Minus Query: 947 tctcttctggtgcaattggcagtccccagctgctgctcctcagtgggatcgggcccaaga 1006 ||||| ||||||||||||||||||||||||| || | || ||||| || || |||| | Sbjct: 74028 tctctgctggtgcaattggcagtccccagctattgttgcttagtggaattggacccagaa 73969 Query: 1007 acgatcttaagaatcataacattcctgtggttcttcacaacaagtatgtggggaaaggga 1066 | || ||||| || ||||||||| |||| || |||| |||| | ||||||| ||||||| Sbjct: 73968 aggaacttaaaaagcataacatttctgtagtccttcgcaacgaacatgtgggtaaaggga 73909 Query: 1067 tggctgacaaccccatgaactccatcttcatacctacgaaaagcccccctcggcagtcac 1126 || | || || || ||||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 73908 tgtcagataatccaatgaattccatctttatacctaccaaggatgcccctaagcaatcac 73849 Query: 1127 tgattgagactgttggaatcactgaagccggtgtgttcatcgaggccagcagtggttttg 1186 ||||| ||||||||||||| || || | ||| | |||||| || |||||||||||||| Sbjct: 73848 tgattcagactgttggaataaccgacggcggggcgttcatagaagccagcagtggtttca 73789 Query: 1187 gccagtctgaaaaaagcatccactgccaccacggaatcatgtctgctgag 1236 ||||||| | | || ||||| |||||||| ||||||||||| |||||| Sbjct: 73788 gccagtcaccagatagtatccagtgccaccatggaatcatgtccgctgag 73739 Score = 105 bits (53), Expect = 6e-19 Identities = 152/185 (82%) Strand = Plus / Minus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactaccatggtgggtgtcatgta 1686 ||||| ||||||| ||||| || ||||||||||||| |||||||| || || ||||| Sbjct: 72871 gagcagttttgcagagacacagtggtcaccatctggcattaccatggcggatgccatgtg 72812 Query: 1687 gggaaggtggtcgaccagcagcaccgggtgcttggagtctcagggctccgcgttgttgat 1746 || |||||||| ||||| || |||| ||| |||| |||||||| || || || | ||| Sbjct: 72811 ggcaaggtggttgaccaacaataccgtgtgattggtgtctcaggccttcgtgtgatcgat 72752 Query: 1747 ggctcaacgttctctaggtcaccagggaccaaccctcaagccacggtcatgatgatgggc 1806 || || || || | |||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 72751 gggtcgaccttatttaggtcaccaggaaccaacccgcaagccacagtcatgatgatgggc 72692 Query: 1807 aggta 1811 ||||| Sbjct: 72691 aggta 72687 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Minus Query: 1453 gatctcagccgttgtgtctatggcatcaagaccattgagaaaatactgaagacaaacagt 1512 |||||||| || ||||||||||| ||||||||||| |||| |||||||||||||||| | Sbjct: 73045 gatctcagtcggtgtgtctatgggatcaagaccatagagagaatactgaagacaaaccat 72986 Query: 1513 ttcgctcatctgactcctgatggtgctggatatgaaatggaaagggtgctcaacatgag 1571 ||| || || | || | |||||| ||||||| ||||||| ||||||||||||||| Sbjct: 72985 ttcactaattttaccctcaatggtggtggatatccaatggaagtggtgctcaacatgag 72927 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 628 tggcaggctgcactgcgggatgggcttgttgaagcaggtgtatcccctttcaatgggtac 687 ||||| |||||||||||||| ||||| |||||||||| || || |||| |||||| ||| Sbjct: 74434 tggcaagctgcactgcgggacgggctgcttgaagcaggggtctcaccttacaatggatac 74375 Query: 688 acctatgatcat 699 | |||||||||| Sbjct: 74374 agctatgatcat 74363 Score = 60.0 bits (30), Expect = 3e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 443 tctccaccgacggcgtcatcaatgcccgggcaagggtgctgggcggtggtacctgcatca 502 ||||||| || || ||||||||||||||||||| ||| || || ||||| || | ||| Sbjct: 75906 tctccactgatggtgtcatcaatgcccgggcaaaggttctaggtggtggaactagtgtca 75847 Query: 503 atgctggcttctacagccgagc 524 ||||||| |||||||||||||| Sbjct: 75846 atgctggtttctacagccgagc 75825 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 319 aagtacaaggtgctcgtgctggagaggggcggatccccttatggcaaccgcaacatctcc 378 ||||||||||||||| ||||||| || || || || ||||| |||||||| |||||||| Sbjct: 76030 aagtacaaggtgctcttgctggaaagaggagggtctccttacggcaaccggaacatctca 75971 Query: 379 tacatggagaacttccacat 398 | | |||||||||||||| Sbjct: 75970 catcttgagaacttccacat 75951
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1766 caccagggaccaaccctcaagccacggtcatgatgatgggcaggta 1811 |||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 26523727 cacctgggaccaatcctcaagccacaatcatgatgatgggcaggta 26523772 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 967 agtccccagctgctgctcctcagtgg 992 ||||||||| |||||||||||||||| Sbjct: 26523003 agtccccagttgctgctcctcagtgg 26523028
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1766 caccagggaccaaccctcaagccacggtcatgatgatgggcaggta 1811 |||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 57380 cacctgggaccaatcctcaagccacaatcatgatgatgggcaggta 57425 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 967 agtccccagctgctgctcctcagtgg 992 ||||||||| |||||||||||||||| Sbjct: 56656 agtccccagttgctgctcctcagtgg 56681
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1766 caccagggaccaaccctcaagccacggtcatgatgatgggcaggta 1811 |||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 135766 cacctgggaccaatcctcaagccacaatcatgatgatgggcaggta 135811 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 967 agtccccagctgctgctcctcagtgg 992 ||||||||| |||||||||||||||| Sbjct: 135042 agtccccagttgctgctcctcagtgg 135067
>emb|CR855158.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147H17, complete sequence Length = 79528 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactacca 1670 |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 60251 gagcaattctgcaaggacaccgtcatgaccatctggcactacca 60294
>ref|NM_001060147.1| Oryza sativa (japonica cultivar-group) Os04g0573100 (Os04g0573100) mRNA, complete cds Length = 2044 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactacca 1670 |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 1600 gagcaattctgcaaggacaccgtcatgaccatctggcactacca 1643
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactacca 1670 |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 28845379 gagcaattctgcaaggacaccgtcatgaccatctggcactacca 28845422
>dbj|AK106787.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A02, full insert sequence Length = 2044 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactacca 1670 |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 1600 gagcaattctgcaaggacaccgtcatgaccatctggcactacca 1643
>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete sequence Length = 132817 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 1615 acagaatccctagagcaattttgcaaggacacggtaatcaccatctggcactaccatggt 1674 |||||||| ||||| || ||||| | ||||| || ||||| || |||||||| |||||| Sbjct: 31930 acagaatcactagaacagttttgtagagacactgtgatcactatttggcactatcatggt 31871 Query: 1675 gggtgtcatgtagggaaggt 1694 || || |||||||||||||| Sbjct: 31870 ggatgccatgtagggaaggt 31851 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1780 cctcaagccacggtcatgatgatgggcaggta 1811 |||||||| || |||||||||||||||||||| Sbjct: 31765 cctcaagctactgtcatgatgatgggcaggta 31734
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1627 gagcaattttgcaaggacacggtaatcaccatctggcactacca 1670 |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 57441 gagcaattctgcaaggacaccgtcatgaccatctggcactacca 57484
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Plus Query: 260 actacattgtcgtcggcgggggcaccgccggctgccccctggcggc 305 ||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 143524 actacatcgtcgtcggcggcggcacggccgggtgcccgctggcggc 143569
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Plus Query: 260 actacattgtcgtcggcgggggcaccgccggctgccccctggcggc 305 ||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 988325 actacatcgtcgtcggcggcggcacggccgggtgcccgctggcggc 988370
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Plus Query: 260 actacattgtcgtcggcgggggcaccgccggctgccccctggcggc 305 ||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 8542 actacatcgtcgtcggcggcggcacggccgggtgcccgctggcggc 8587
>gb|AE005774.1| Caulobacter crescentus CB15 section 100 of 359 of the complete genome Length = 11763 Score = 50.1 bits (25), Expect = 0.032 Identities = 25/25 (100%) Strand = Plus / Plus Query: 269 tcgtcggcgggggcaccgccggctg 293 ||||||||||||||||||||||||| Sbjct: 8593 tcgtcggcgggggcaccgccggctg 8617
>ref|NM_101128.3| Arabidopsis thaliana FAD binding / aldehyde-lyase/ oxidoreductase/ oxidoreductase, acting on CH-OH group of donors (AT1G12570) mRNA, complete cds Length = 2018 Score = 46.1 bits (23), Expect = 0.50 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1771 gggaccaaccctcaagccacggtcatgatgatgggcaggtactttggagtgaagatctt 1829 ||||| || |||||||||||||| |||||| | |||||||| | || ||||||||||| Sbjct: 1745 gggacaaatcctcaagccacggttatgatgcttggcaggtatatgggtgtgaagatctt 1803
>gb|AC142095.9| Medicago truncatula clone mth2-14c17, complete sequence Length = 110037 Score = 46.1 bits (23), Expect = 0.50 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2001 gtgcaatattggccattaaattgttta 2027 ||||||| ||||||||||||||||||| Sbjct: 39749 gtgcaatcttggccattaaattgttta 39723
>gb|BT015417.1| Arabidopsis thaliana At1g12570 gene, complete cds Length = 1719 Score = 46.1 bits (23), Expect = 0.50 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1771 gggaccaaccctcaagccacggtcatgatgatgggcaggtactttggagtgaagatctt 1829 ||||| || |||||||||||||| |||||| | |||||||| | || ||||||||||| Sbjct: 1636 gggacaaatcctcaagccacggttatgatgcttggcaggtatatgggtgtgaagatctt 1694
>ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03742.1) partial mRNA Length = 2415 Score = 46.1 bits (23), Expect = 0.50 Identities = 23/23 (100%) Strand = Plus / Plus Query: 256 tacgactacattgtcgtcggcgg 278 ||||||||||||||||||||||| Sbjct: 700 tacgactacattgtcgtcggcgg 722
>gb|AC171534.4| Medicago truncatula chromosome 7 BAC clone mth2-90a20, complete sequence Length = 88903 Score = 46.1 bits (23), Expect = 0.50 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2001 gtgcaatattggccattaaattgttta 2027 ||||||| ||||||||||||||||||| Sbjct: 61700 gtgcaatcttggccattaaattgttta 61674
>gb|AY069890.1| Arabidopsis thaliana At1g12570/T12C24_9 mRNA, complete cds Length = 2014 Score = 46.1 bits (23), Expect = 0.50 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1771 gggaccaaccctcaagccacggtcatgatgatgggcaggtactttggagtgaagatctt 1829 ||||| || |||||||||||||| |||||| | |||||||| | || ||||||||||| Sbjct: 1745 gggacaaatcctcaagccacggttatgatgcttggcaggtatatgggtgtgaagatctt 1803
>emb|AL596324.7| Mouse DNA sequence from clone RP23-324M14 on chromosome 11, complete sequence Length = 204453 Score = 46.1 bits (23), Expect = 0.50 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1024 aacattcctgtggttcttcacaa 1046 ||||||||||||||||||||||| Sbjct: 50868 aacattcctgtggttcttcacaa 50890
>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete sequence Length = 202686 Score = 46.1 bits (23), Expect = 0.50 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1519 catctgactcctgatggtgctgg 1541 ||||||||||||||||||||||| Sbjct: 181891 catctgactcctgatggtgctgg 181869
>ref|NM_001071642.1| Oryza sativa (japonica cultivar-group) Os10g0524500 (Os10g0524500) mRNA, complete cds Length = 2119 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 1793 accaaccctcaggccaccgtcatgatgctcggcaggta 1830
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 ttgtcgtcggcgggggcaccgccggc 291 ||||||||||||| |||||||||||| Sbjct: 2541242 ttgtcgtcggcggcggcaccgccggc 2541267
>gb|DQ384510.1| Homo sapiens clone fa1051 genomic sequence Length = 37353 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1547 aaatggaaagggtgctcaacat 1568 |||||||||||||||||||||| Sbjct: 34542 aaatggaaagggtgctcaacat 34563
>gb|DQ384509.1| Homo sapiens clone fa0917 genomic sequence Length = 40218 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1547 aaatggaaagggtgctcaacat 1568 |||||||||||||||||||||| Sbjct: 23077 aaatggaaagggtgctcaacat 23098
>gb|DQ384507.1| Homo sapiens clone fa0872 genomic sequence Length = 40703 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1547 aaatggaaagggtgctcaacat 1568 |||||||||||||||||||||| Sbjct: 35367 aaatggaaagggtgctcaacat 35388
>gb|DQ384505.1| Homo sapiens clone fa0841 genomic sequence Length = 46000 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1547 aaatggaaagggtgctcaacat 1568 |||||||||||||||||||||| Sbjct: 28854 aaatggaaagggtgctcaacat 28875
>gb|DQ447063.1| Arabidopsis thaliana clone pENTR221-At5g51930 glucose-methanol-choline oxidoreductase family protein (At5g51930) mRNA, complete cds Length = 1693 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1771 gggaccaaccctcaagccacggtcatgatg 1800 ||||| || ||||||||||||||||||||| Sbjct: 1652 gggactaatcctcaagccacggtcatgatg 1681
>ref|NM_105955.2| Arabidopsis thaliana HTH (HOTHEAD); aldehyde-lyase (HTH) mRNA, complete cds Length = 2107 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 1669 tcacaatctggcactaccatggtggatgtc 1698
>ref|NM_124572.1| Arabidopsis thaliana FAD binding / aldehyde-lyase/ oxidoreductase/ oxidoreductase, acting on CH-OH group of donors (AT5G51930) mRNA, complete cds Length = 1749 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1771 gggaccaaccctcaagccacggtcatgatg 1800 ||||| || ||||||||||||||||||||| Sbjct: 1708 gggactaatcctcaagccacggtcatgatg 1737
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 121020 accaaccctcaggccaccgtcatgatgctcggcaggta 121057
>gb|AC166251.6| Mus musculus BAC RP23-298H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187073 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 888 tgaagatgggagactccaccag 909 |||||||||||||||||||||| Sbjct: 61386 tgaagatgggagactccaccag 61407
>gb|AC155732.21| Mus musculus 6 BAC RP24-235I13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165822 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 888 tgaagatgggagactccaccag 909 |||||||||||||||||||||| Sbjct: 20351 tgaagatgggagactccaccag 20372
>gb|AC166261.6| Mus musculus BAC RP23-343K20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190585 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 888 tgaagatgggagactccaccag 909 |||||||||||||||||||||| Sbjct: 10789 tgaagatgggagactccaccag 10768
>gb|AC002541.1| Homo sapiens BAC clone CTB-43K6 from 7, complete sequence Length = 166983 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1547 aaatggaaagggtgctcaacat 1568 |||||||||||||||||||||| Sbjct: 5454 aaatggaaagggtgctcaacat 5475
>dbj|AK221002.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-65-L07 Length = 495 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 56 tcacaatctggcactaccatggtggatgtc 85
>dbj|AK221876.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-16-D04 Length = 1125 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 723 tcacaatctggcactaccatggtggatgtc 752
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1068 ggctgacaaccccatgaactcc 1089 |||||||||||||||||||||| Sbjct: 2083873 ggctgacaaccccatgaactcc 2083894
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 19859982 accaaccctcaggccaccgtcatgatgctcggcaggta 19860019
>gb|AC012507.9| Homo sapiens BAC clone RP11-499P1 from 2, complete sequence Length = 165704 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 112 tccctgctctgcatcaagctcgtggt 137 |||| ||||||||||||||||||||| Sbjct: 145825 tcccagctctgcatcaagctcgtggt 145800
>gb|AC161124.4| Pan troglodytes BAC clone CH251-660C11 from chromosome 7, complete sequence Length = 227304 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1547 aaatggaaagggtgctcaacat 1568 |||||||||||||||||||||| Sbjct: 138507 aaatggaaagggtgctcaacat 138528
>gb|AY054193.1| Arabidopsis thaliana At1g72970/F3N23_17 mRNA, complete cds Length = 2103 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 1670 tcacaatctggcactaccatggtggatgtc 1699
>dbj|AB027458.2| Arabidopsis thaliana ACE mRNA, complete cds Length = 2096 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 1662 tcacaatctggcactaccatggtggatgtc 1691
>dbj|AB015478.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSG15 Length = 81347 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1771 gggaccaaccctcaagccacggtcatgatg 1800 ||||| || ||||||||||||||||||||| Sbjct: 5015 gggactaatcctcaagccacggtcatgatg 5044
>gb|BT002648.1| Arabidopsis thaliana At1g72970/F3N23_17 gene, complete cds Length = 1785 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 1574 tcacaatctggcactaccatggtggatgtc 1603
>dbj|AK119563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A02, full insert sequence Length = 2045 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 1716 accaaccctcaggccaccgtcatgatgctcggcaggta 1753
>dbj|AK110268.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C04, full insert sequence Length = 2519 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 395 accaaccctcaggccaccgtcatgatgctcggcaggta 358
>dbj|AK101367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L09, full insert sequence Length = 2033 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 1705 accaaccctcaggccaccgtcatgatgctcggcaggta 1742
>dbj|AK073777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070C01, full insert sequence Length = 2038 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 1716 accaaccctcaggccaccgtcatgatgctcggcaggta 1753
>emb|BX817038.1|CNS0ADYQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2090 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 1656 tcacaatctggcactaccatggtggatgtc 1685
>gb|AF251031.1|AF251031 Oryza sativa putative mandelonitrile lyase (ACE) mRNA, complete cds Length = 2154 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1774 accaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||||||||| ||||| ||||||||| | |||||||| Sbjct: 1802 accaaccctcaggccaccgtcatgatgctcggcaggta 1839
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 57981 tcacaatctggcactaccatggtggatgtc 58010
>emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-330O19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 218956 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1545 tgaaatggaaagggtgctcaac 1566 |||||||||||||||||||||| Sbjct: 194048 tgaaatggaaagggtgctcaac 194069
>emb|AL132633.2|CNS01DT3 Human chromosome 14 DNA sequence BAC C-2216L14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 120571 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1545 tgaaatggaaagggtgctcaac 1566 |||||||||||||||||||||| Sbjct: 108942 tgaaatggaaagggtgctcaac 108921
>dbj|AB027507.1| Arabidopsis thaliana ACE (ADHESION OF CALYX EDGES) gene, complete cds Length = 2928 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1652 tcaccatctggcactaccatggtgggtgtc 1681 |||| |||||||||||||||||||| |||| Sbjct: 2587 tcacaatctggcactaccatggtggatgtc 2616
>dbj|AK242487.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080306H24, full insert sequence Length = 1952 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 709 accaaggttggtggcaccatctttgacgc 737 |||||||| |||||| ||||||||||||| Sbjct: 628 accaaggtcggtggctccatctttgacgc 656
>ref|NM_001054267.1| Oryza sativa (japonica cultivar-group) Os02g0678300 (Os02g0678300) mRNA, complete cds Length = 2040 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 709 accaaggttggtggcaccatctttgacgc 737 |||||||| |||||| ||||||||||||| Sbjct: 580 accaaggtcggtggctccatctttgacgc 608
>gb|DQ773078.1| Synthetic construct Vibrio cholerae clone FLH199598.01F hflX gene, complete sequence Length = 1290 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1142 gaatcactgaagccggtgtgt 1162 ||||||||||||||||||||| Sbjct: 647 gaatcactgaagccggtgtgt 667
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 7.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 258 cgactacattgtcgtcggcgggggcaccgccggctgc 294 ||||||||| || ||||||| ||||||||||||||| Sbjct: 3967434 cgactacatcgtggtcggcgcaggcaccgccggctgc 3967470
>gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, complete sequence Length = 213921 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1484 ccattgagaaaatactgaaga 1504 ||||||||||||||||||||| Sbjct: 164314 ccattgagaaaatactgaaga 164334
>gb|AE004123.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 31 of 251 of the complete chromosome Length = 14486 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1142 gaatcactgaagccggtgtgt 1162 ||||||||||||||||||||| Sbjct: 10026 gaatcactgaagccggtgtgt 10046
>gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, complete sequence Length = 159298 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1484 ccattgagaaaatactgaaga 1504 ||||||||||||||||||||| Sbjct: 134066 ccattgagaaaatactgaaga 134046
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1376 caggccatcttgtccttgctg 1396 ||||||||||||||||||||| Sbjct: 2064676 caggccatcttgtccttgctg 2064696
>gb|AE012267.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 175 of 460 of the complete genome Length = 10029 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 ggcaaccgcaacatctcctacatgg 385 ||||||| ||||||||||||||||| Sbjct: 1386 ggcaacctcaacatctcctacatgg 1410
>ref|XM_743904.1| Aspergillus fumigatus Af293 L-fucose permease (Afu7g05120) partial mRNA Length = 906 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 732 tgacgcaaatggccaccgcca 752 ||||||||||||||||||||| Sbjct: 317 tgacgcaaatggccaccgcca 337
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 709 accaaggttggtggcaccatctttgacgc 737 |||||||| |||||| ||||||||||||| Sbjct: 27722073 accaaggtcggtggctccatctttgacgc 27722101
>emb|AL391726.8| Human DNA sequence from clone RP11-86O4 on chromosome 6 Contains part of the gene for androgen induced protein (AIG-1) (CGI-103) (includes FLJ10485), complete sequence Length = 121029 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1490 agaaaatactgaagacaaaca 1510 ||||||||||||||||||||| Sbjct: 86184 agaaaatactgaagacaaaca 86164
>emb|AL137140.12| Human DNA sequence from clone RP11-137M6 on chromosome 13q21.33-22.3 Contains the SCEL gene for sciellin, a novel gene and a CpG island, complete sequence Length = 193098 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1907 gaaaagaaatcactaattttt 1927 ||||||||||||||||||||| Sbjct: 168828 gaaaagaaatcactaattttt 168808
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 361 ggcaaccgcaacatctcctacatgg 385 ||||||| ||||||||||||||||| Sbjct: 3110435 ggcaacctcaacatctcctacatgg 3110411
>emb|Z48754.1|S7942IDIA Synechococcus PCC6301 idiA gene and ORF1 to 7 Length = 5763 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1376 caggccatcttgtccttgctg 1396 ||||||||||||||||||||| Sbjct: 5611 caggccatcttgtccttgctg 5631
>gb|AY033147.1| Leishmania infantum putative transporter protein (acrD) gene, partial cds Length = 159 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 gccttcgtctccaccgacggc 456 ||||||||||||||||||||| Sbjct: 91 gccttcgtctccaccgacggc 111
>gb|AC018694.4|AC018694 Homo sapiens BAC clone RP11-563P16 from 11, complete sequence Length = 196832 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1376 caggccatcttgtccttgctg 1396 ||||||||||||||||||||| Sbjct: 1828 caggccatcttgtccttgctg 1848
>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I, complete sequence Length = 106142 Score = 42.1 bits (21), Expect = 7.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1771 gggaccaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||| || |||||||||||||| |||||| | |||||||| Sbjct: 28691 gggacaaatcctcaagccacggttatgatgcttggcaggta 28651
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 709 accaaggttggtggcaccatctttgacgc 737 |||||||| |||||| ||||||||||||| Sbjct: 7406 accaaggtcggtggctccatctttgacgc 7434
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 709 accaaggttggtggcaccatctttgacgc 737 |||||||| |||||| ||||||||||||| Sbjct: 107939 accaaggtcggtggctccatctttgacgc 107967
>dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, complete sequences Length = 161601 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1484 ccattgagaaaatactgaaga 1504 ||||||||||||||||||||| Sbjct: 87549 ccattgagaaaatactgaaga 87529
>gb|AC025416.4|AC025416 Genomic sequence for Arabidopsis thaliana BAC F5O11 from chromosome I, complete sequence Length = 118374 Score = 42.1 bits (21), Expect = 7.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1771 gggaccaaccctcaagccacggtcatgatgatgggcaggta 1811 ||||| || |||||||||||||| |||||| | |||||||| Sbjct: 107674 gggacaaatcctcaagccacggttatgatgcttggcaggta 107634
>gb|U19762.1|SSU19762 Synechococcus sp. nutrient-stress induced DNA binding protein (dpsA) gene, complete cds Length = 971 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1376 caggccatcttgtccttgctg 1396 ||||||||||||||||||||| Sbjct: 556 caggccatcttgtccttgctg 576
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1197 aaaaagcatccactgccacca 1217 ||||||||||||||||||||| Sbjct: 696744 aaaaagcatccactgccacca 696724
>dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L13, complete sequences Length = 96727 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1376 caggccatcttgtccttgctg 1396 ||||||||||||||||||||| Sbjct: 179 caggccatcttgtccttgctg 159
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1376 caggccatcttgtccttgctg 1396 ||||||||||||||||||||| Sbjct: 2252354 caggccatcttgtccttgctg 2252334 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 354,609,470 Number of extensions: 19189044 Number of successful extensions: 89479 Number of sequences better than 10.0: 90 Number of HSP's gapped: 89448 Number of HSP's successfully gapped: 139 Length of query: 2047 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2024 Effective length of database: 18,503,978,556 Effective search space: 37452052597344 Effective search space used: 37452052597344 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
