ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf15c14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK105251: 389 e-108
2AK073256:Os02g0723700 363 e-101
3AK120240: 33 0.48
4Os11g0575500:Os11g0575500 30 2.4
5Os09g0321600:Os09g0321600 29 5.3
6AK120729:Os09g0540500 29 5.3
7Os07g0469800:Os07g0469800 29 6.9
8AK108674:Os05g0552700 29 6.9
9AK106287:Os02g0108100 29 6.9
10AK099181:Os05g0589000 29 6.9
11AK064240:Os06g0226700 29 6.9
12AK061980:Os05g0589000 29 6.9
13Os12g0529200:Os12g0529200 28 9.0
14Os07g0478600:Os07g0478600 28 9.0
15AK072199:Os02g0730700 28 9.0
16AK068664:Os02g0730700 28 9.0 
>AK105251: |
          Length = 244
 Score =  389 bits (999), Expect = e-108
 Identities = 190/218 (87%), Positives = 210/218 (96%), Gaps = 2/218 (0%)
 Frame = +3

Query: 60  MKTVSLGAPRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRT 239
           MKTVSLGA R S+VKFRMPTRDNLVPIRVD+EVDGQRYRDAFTWNP DPDSE+I+FAKRT
Sbjct: 1   MKTVSLGAARPSSVKFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPCDPDSEIISFAKRT 60

Query: 240 AKELKLPATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWD 419
           AK+LKLPA FVPQMLHSIQGQL EFRSYEG+EMQ++EKI+PLKIDLR+NNT++RDQFLWD
Sbjct: 61  AKDLKLPANFVPQMLHSIQGQLTEFRSYEGEEMQIREKIVPLKIDLRINNTVIRDQFLWD 120

Query: 420 IGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIREQLYEIASQTVSAMRE-AKMSKK-R 593
           IGNL+SDPEEFARTLCDDLNITDPEVGPAIAV IREQLYEIASQ+VSAMRE A++SKK R
Sbjct: 121 IGNLDSDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIASQSVSAMREAARVSKKGR 180

Query: 594 RAPEFASNSKAMNNAVDMFKYFGSKGSVIRKRKEWYLY 707
           RAPEFASNSKAMNN++D+FKYFGSKGSV+RKRKEWYLY
Sbjct: 181 RAPEFASNSKAMNNSLDLFKYFGSKGSVVRKRKEWYLY 218
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>AK073256:Os02g0723700 |
          Length = 232

 Score =  363 bits (933), Expect = e-101
 Identities = 176/202 (87%), Positives = 195/202 (96%), Gaps = 2/202 (0%)
 Frame = +3

Query: 108 RMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLH 287
           R PTRDNLVPIRVD+EVDGQRYRDAFTWNP DPDSE+I+FAKRTAK+LKLPA FVPQMLH
Sbjct: 5   RRPTRDNLVPIRVDVEVDGQRYRDAFTWNPCDPDSEIISFAKRTAKDLKLPANFVPQMLH 64

Query: 288 SIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLC 467
           SIQGQL EFRSYEG+EMQ++EKI+PLKIDLR+NNT++RDQFLWDIGNL+SDPEEFARTLC
Sbjct: 65  SIQGQLTEFRSYEGEEMQIREKIVPLKIDLRINNTVIRDQFLWDIGNLDSDPEEFARTLC 124

Query: 468 DDLNITDPEVGPAIAVCIREQLYEIASQTVSAMRE-AKMSKK-RRAPEFASNSKAMNNAV 641
           DDLNITDPEVGPAIAV IREQLYEIASQ+VSAMRE A++SKK RRAPEFASNSKAMNN++
Sbjct: 125 DDLNITDPEVGPAIAVSIREQLYEIASQSVSAMREAARVSKKGRRAPEFASNSKAMNNSL 184

Query: 642 DMFKYFGSKGSVIRKRKEWYLY 707
           D+FKYFGSKGSV+RKRKEWYLY
Sbjct: 185 DLFKYFGSKGSVVRKRKEWYLY 206
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>AK120240: |
          Length = 823

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = +2

Query: 107 PHADEGQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQAPG 262
           P    G  G   RR + GR   Q RLH    RSRL  H +R+  GQ  + PG
Sbjct: 136 PGGPAGAGGRGVRRAQEGRRR-QVRLHQRRGRSRLRLHTVRRRHGQARRRPG 186
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>Os11g0575500:Os11g0575500 |
          Length = 295

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = +2

Query: 125 QPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQAPGHLCPSDAPL 289
           Q  AD  RHRGG              +++GG H   E G+G  AP      DAPL
Sbjct: 47  QAAADGERHRGGEDT--------SVHAQVGGAH--HEQGRGGAAPDGSSRHDAPL 91
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>Os09g0321600:Os09g0321600 |
          Length = 80

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 200 RSRLGGHHLRQEDGQGAQAPGHLCPSDAPLHP 295
           R RLGG H  +E+ +GA      C  DAPL P
Sbjct: 43  RRRLGGRHEEEEEERGAG-----CEGDAPLPP 69
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>AK120729:Os09g0540500 |
          Length = 414

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 339 QVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEE 449
           + +E I    +DL +NN+   D++  D+G+ E D E+
Sbjct: 378 KAQEPIQVRHVDLDINNSSSSDEYSSDVGSSEEDDED 414
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>Os07g0469800:Os07g0469800 |
          Length = 195

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 25/82 (30%), Positives = 30/82 (36%)
 Frame = +2

Query: 110 HADEGQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQAPGHLCPSDAPL 289
           H   G+PG    R RGGR    GR    P     GG+      G G       C  D   
Sbjct: 12  HGQPGEPGQPGGRGRGGRGGRGGRGRGGP--GGAGGY-----GGDGGYGGDGGCGGDV-- 62

Query: 290 HPGAIGRVPFLRGAGDAGQGED 355
             G +G V +    G+ G G D
Sbjct: 63  --GFVGYVGYGGDGGNGGDGAD 82
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>AK108674:Os05g0552700 |
          Length = 490

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +2

Query: 206 RLGGHHLRQEDGQGAQAPGHLCPSDAPLHPGAIG---RVPFLRGAGDAGQ 346
           RL   +LR +D  G +    L P+D   H  A+G      F+ G  DAG+
Sbjct: 63  RLRFEYLRDDDDDGDERCQQLAPNDVLSHVTAVGPSALAEFIDGQADAGR 112
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>AK106287:Os02g0108100 |
          Length = 390

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 101 EVPHADEGQPGADTRRHRGGRPAL-QGRLHLEPPRSRLGGHHLRQEDGQGAQAPGHLCPS 277
           E   A EG  GA+  R RGGR A  +GR      R R G  H     G+  Q P    P 
Sbjct: 135 EAEEAGEGGSGAERCRGRGGREAPGRGRRARRHGRRRGGASH---RWGRRPQTPAPPSPY 191

Query: 278 DAP 286
            AP
Sbjct: 192 PAP 194
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>AK099181:Os05g0589000 |
          Length = 351

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/40 (45%), Positives = 20/40 (50%)
 Frame = -2

Query: 547 LAIS*SCSRMQTAIAGPTSGSVMFKSSHNVLANSSGSLSR 428
           L +    S   T  +GP   S  F SS NV A SSGS SR
Sbjct: 68  LVVEPMSSTGSTQPSGPEVRSSSFSSSENVRARSSGSSSR 107
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>AK064240:Os06g0226700 |
          Length = 447

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -1

Query: 200 AGVPGEGVPVALAVHLDVDAYRHQVVPRRHAELHSGGARGAEAHRLHR 57
           AG  GEG P  LA    ++AYR Q            GA+G+  HR H+
Sbjct: 382 AGGGGEGHPGILAA---LNAYRAQAAQPDAGAAAQNGAQGSSQHRQHQ 426
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>AK061980:Os05g0589000 |
          Length = 351

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/40 (45%), Positives = 20/40 (50%)
 Frame = -2

Query: 547 LAIS*SCSRMQTAIAGPTSGSVMFKSSHNVLANSSGSLSR 428
           L +    S   T  +GP   S  F SS NV A SSGS SR
Sbjct: 68  LVVEPMSSTGSTQPSGPEVRSSSFSSSENVRARSSGSSSR 107
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>Os12g0529200:Os12g0529200 |
          Length = 583

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +3

Query: 375 LRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAV 515
           +R+ N  +R     DIG L  D EEFA     +L IT  EVGP + V
Sbjct: 135 IRLTNQHLRRLKCLDIGVLCRDGEEFA---VAELQITRSEVGPELHV 178
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>Os07g0478600:Os07g0478600 |
          Length = 273

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = +2

Query: 122 GQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQAPGHLCPSDAPLHPGA 301
           G+PG D  R  G      GRL      + + G  + + DG GA       P  APL    
Sbjct: 103 GRPGGDVMRDGGAGAGGHGRLE---GAAAVAGGSMPRSDGSGA-------PRSAPL---- 148

Query: 302 IGRVPFLRGAGDAGQG 349
              +  +R  GD G G
Sbjct: 149 -SWIWRMRAVGDGGDG 163
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>AK072199:Os02g0730700 |
          Length = 573

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +3

Query: 30  GGDGRTARTAMKTVSLGAPRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDP 206
           GG GR +R  ++     A  +++          L+PI+ ++  DGQ Y   F  NP  P
Sbjct: 165 GGVGRKSRNKLEVKKAAAAGTNSTA--------LLPIKGNVFPDGQYYTSIFVGNPPRP 215
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>AK068664:Os02g0730700 |
          Length = 573

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +3

Query: 30  GGDGRTARTAMKTVSLGAPRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDP 206
           GG GR +R  ++     A  +++          L+PI+ ++  DGQ Y   F  NP  P
Sbjct: 165 GGVGRKSRNKLEVKKAAAAGTNSTA--------LLPIKGNVFPDGQYYTSIFVGNPPRP 215


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,562,491
Number of extensions: 660817
Number of successful extensions: 2276
Number of sequences better than 10.0: 16
Number of HSP's gapped: 2267
Number of HSP's successfully gapped: 16
Length of query: 373
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 271
Effective length of database: 11,315,673
Effective search space: 3066547383
Effective search space used: 3066547383
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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