ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf15c14 |
|---|---|
| Clone Library Name | barley_pub |
>P93045:BSH_ARATH Chromatin structure remodeling complex protein BSH - Arabidopsis| thaliana (Mouse-ear cress) Length = 240 Score = 272 bits (695), Expect = 2e-72 Identities = 129/204 (63%), Positives = 165/204 (80%), Gaps = 1/204 (0%) Frame = +3 Query: 99 VKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQ 278 VKFRMPT +NLVPIR+DI+ +GQRY+DAFTWNP DPD+EV+ FAKRT K+LKLP FV Q Sbjct: 13 VKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTVKDLKLPYAFVTQ 72 Query: 279 MLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFAR 458 + SIQ QL++FR+YEGQ+M EKI+P+K+DLRVN+T+++DQFLWD+ N ESDPEEFAR Sbjct: 73 IAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFAR 132 Query: 459 TLCDDLNITDPEVGPAIAVCIREQLYEIASQTVSAMREAKMSKK-RRAPEFASNSKAMNN 635 TLC DL + DPEVGPA+A IREQLYEIA Q+V++ RE+++SKK RR + S SKA Sbjct: 133 TLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRGSDHGSASKASGL 192 Query: 636 AVDMFKYFGSKGSVIRKRKEWYLY 707 ++D+ K F K SV+RKRK+ +Y Sbjct: 193 SMDLMKLFSFKSSVVRKRKDLDVY 216
>Q5U379:SNF5_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 373 Score = 90.1 bits (222), Expect = 1e-17 Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + FA+ +L L P TFVP + +I+ Q+ Sbjct: 174 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQI 233 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + + Q+ ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 234 ESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 291 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 292 GGEFVTTIAYSIRGQL 307 Score = 54.3 bits (129), Expect = 9e-07 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = +3 Query: 345 KEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIR 524 +E ++P+++D+ ++ +RD F W++ PE FA LCDDL+++ PAIA IR Sbjct: 171 QEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIR 230 Query: 525 EQLYEIASQTV 557 +Q+ + ++ Sbjct: 231 QQIESYPTDSI 241 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 247 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 306 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 307 L----SWHQRTYAFSENPLP-TVEIAIRNTGDADQW 337
>Q9Z0H3:SNF5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Mus musculus (Mouse) Length = 385 Score = 88.6 bits (218), Expect = 4e-17 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + F++ +L L P TFVP + +I+ Q+ Sbjct: 186 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 245 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 246 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 303 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 304 GGEFVTTIAYSIRGQL 319 Score = 52.4 bits (124), Expect = 3e-06 Identities = 22/70 (31%), Positives = 41/70 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ ++ +RD F W++ PE F+ LCDDL++ PAIA IR+ Sbjct: 184 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 243 Query: 528 QLYEIASQTV 557 Q+ + ++ Sbjct: 244 QIESYPTDSI 253 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 259 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 318 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 319 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 349
>Q12824:SNF5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Homo sapiens (Human) Length = 385 Score = 88.6 bits (218), Expect = 4e-17 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + F++ +L L P TFVP + +I+ Q+ Sbjct: 186 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 245 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 246 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 303 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 304 GGEFVTTIAYSIRGQL 319 Score = 52.4 bits (124), Expect = 3e-06 Identities = 22/70 (31%), Positives = 41/70 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ ++ +RD F W++ PE F+ LCDDL++ PAIA IR+ Sbjct: 184 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 243 Query: 528 QLYEIASQTV 557 Q+ + ++ Sbjct: 244 QIESYPTDSI 253 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 259 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 318 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 319 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 349
>Q5ZK40:SNF5_CHICK SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Gallus gallus (Chicken) Length = 386 Score = 88.6 bits (218), Expect = 4e-17 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + F++ +L L P TFVP + +I+ Q+ Sbjct: 187 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 246 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 247 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 304 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 305 GGEFVTTIAYSIRGQL 320 Score = 52.4 bits (124), Expect = 3e-06 Identities = 22/70 (31%), Positives = 41/70 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ ++ +RD F W++ PE F+ LCDDL++ PAIA IR+ Sbjct: 185 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 244 Query: 528 QLYEIASQTV 557 Q+ + ++ Sbjct: 245 QIESYPTDSI 254 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 260 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 319 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 320 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 350
>Q5BIN2:SNF5_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Bos taurus (Bovine) Length = 385 Score = 88.6 bits (218), Expect = 4e-17 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + F++ +L L P TFVP + +I+ Q+ Sbjct: 186 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQI 245 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 246 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 303 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 304 GGEFVTTIAYSIRGQL 319 Score = 52.4 bits (124), Expect = 3e-06 Identities = 22/70 (31%), Positives = 41/70 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ ++ +RD F W++ PE F+ LCDDL++ PAIA IR+ Sbjct: 184 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQ 243 Query: 528 QLYEIASQTV 557 Q+ + ++ Sbjct: 244 QIESYPTDSI 253 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 259 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 318 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 319 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 349
>Q6DFM1:SNF5_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) Length = 378 Score = 87.8 bits (216), Expect = 7e-17 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + FA+ +L L P FVP + +I+ Q+ Sbjct: 179 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQI 238 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 239 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 296 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 297 GGEFVTTIAYSIRGQL 312 Score = 53.5 bits (127), Expect = 2e-06 Identities = 23/70 (32%), Positives = 41/70 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ ++ +RD F W++ PE FA LCDDL++ PAIA IR+ Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236 Query: 528 QLYEIASQTV 557 Q+ + ++ Sbjct: 237 QIESYPTDSI 246 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 252 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 311 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 312 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 342
>Q6GQ82:SNF5_XENLA SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Xenopus laevis (African clawed frog) Length = 378 Score = 87.8 bits (216), Expect = 7e-17 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E+DGQ+ RDAFTWN + FA+ +L L P FVP + +I+ Q+ Sbjct: 179 LVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQI 238 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L + Sbjct: 239 ESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGL- 296 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 297 GGEFVTTIAYSIRGQL 312 Score = 53.5 bits (127), Expect = 2e-06 Identities = 23/70 (32%), Positives = 41/70 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ ++ +RD F W++ PE FA LCDDL++ PAIA IR+ Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236 Query: 528 QLYEIASQTV 557 Q+ + ++ Sbjct: 237 QIESYPTDSI 246 Score = 38.5 bits (88), Expect = 0.051 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL L FV + +SI+GQ Sbjct: 252 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ 311 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 312 L----SWHQKTYAFSENPLP-TVEIAIRNTGDADQW 342
>O42467:SNF5_TETFL SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily B member 1 - Tetraodon fluviatilis (Puffer fish) Length = 373 Score = 85.1 bits (209), Expect = 5e-16 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 1/136 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 LVPIR+D+E++GQ+ RDAFTWN + FA+ +L L P FVP + +I+ Q+ Sbjct: 174 LVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIRQQI 233 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E Q ++++ +K+++ V N + DQF WD+ E+ PE+FA LC +L Sbjct: 234 ESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG-Q 291 Query: 486 DPEVGPAIAVCIREQL 533 E IA IR QL Sbjct: 292 GGEFVTTIAYSIRGQL 307 Score = 50.8 bits (120), Expect = 1e-05 Identities = 22/62 (35%), Positives = 36/62 (58%) Frame = +3 Query: 348 EKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCIRE 527 E ++P+++D+ + +RD F W++ PE FA LCDDL++ PAI IR+ Sbjct: 172 EVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIRQ 231 Query: 528 QL 533 Q+ Sbjct: 232 QI 233 Score = 37.4 bits (85), Expect = 0.11 Identities = 26/96 (27%), Positives = 45/96 (46%) Frame = +3 Query: 123 DNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQ 302 D V I+++I V D F W+ + ++ FA + EL FV + +SI+GQ Sbjct: 247 DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGQGGEFVTTIAYSIRGQ 306 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQF 410 L S+ + E +P +++ + NT DQ+ Sbjct: 307 L----SWHQKAYAFSENPLP-TVEIAIRNTGAADQW 337
>Q6C9N2:SFH1_YARLI Chromatin structure remodeling complex protein SFH1 - Yarrowia| lipolytica (Candida lipolytica) Length = 441 Score = 69.3 bits (168), Expect = 3e-11 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 4/152 (2%) Frame = +3 Query: 129 LVPIRVDIE-VDGQRYRDAFTWNPRDPDSEVIT---FAKRTAKELKLPATFVPQMLHSIQ 296 L+PIRV +E +D R +D F W D D +++T FA T +L +P + QM I+ Sbjct: 205 LIPIRVAVENIDVFRVQDFFLW---DADEKILTPEQFATLTCADLDVPIGYSAQMSAQIK 261 Query: 297 GQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDL 476 QLAE+ + V+ ++ +++ + V+ + D+F WD+ + P+EFART+ DL Sbjct: 262 KQLAEYTAAPALPKDVEVHVI-VELAVTVDKIVYEDKFEWDLSGEYATPQEFARTVVQDL 320 Query: 477 NITDPEVGPAIAVCIREQLYEIASQTVSAMRE 572 + E PAI QLYE + A E Sbjct: 321 GL-GQEFYPAITY----QLYETLGKLQKAWLE 347
>P18480:SNF5_YEAST Transcription regulatory protein SNF5 - Saccharomyces cerevisiae| (Baker's yeast) Length = 905 Score = 66.6 bits (161), Expect = 2e-10 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 16/156 (10%) Frame = +3 Query: 117 TRDNLVPIRVDIEVDGQRY--RDAFTWNPRDPDSEVITFAKRTAKELKLPAT----FVPQ 278 T + LVPIR++ + D R+ RD WN D ++ F ++ + + Sbjct: 453 TSEQLVPIRLEFDQDRDRFFLRDTLLWNKNDKLIKIEDFVDDMLRDYRFEDATREQHIDT 512 Query: 279 MLHSIQGQLAEFRSYE----------GQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGN 428 + SIQ Q+ EF+ G +++++ +K+D+ V + DQF W+I N Sbjct: 513 ICQSIQEQIQEFQGNPYIELNQDRLGGDDLRIR-----IKLDIVVGQNQLIDQFEWEISN 567 Query: 429 LESDPEEFARTLCDDLNITDPEVGPAIAVCIREQLY 536 ++ PEEFA ++C +L + E AIA IREQ++ Sbjct: 568 SDNCPEEFAESMCQELELPG-EFVTAIAHSIREQVH 602 Score = 39.3 bits (90), Expect = 0.030 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = +3 Query: 78 GAPRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL 257 G P + R+ D + I++DI V + D F W + D+ FA+ +EL+L Sbjct: 526 GNPYIELNQDRLGGDDLRIRIKLDIVVGQNQLIDQFEWEISNSDNCPEEFAESMCQELEL 585 Query: 258 PATFVPQMLHSIQGQL 305 P FV + HSI+ Q+ Sbjct: 586 PGEFVTAIAHSIREQV 601
>Q09699:YA28_SCHPO Uncharacterized protein C2F7.08c - Schizosaccharomyces pombe| (Fission yeast) Length = 632 Score = 61.6 bits (148), Expect = 6e-09 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 37/185 (20%) Frame = +3 Query: 87 RSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLP-- 260 RS+ + ++P +LVPIR++I+ D + RD+FTWN D + FA++ + +P Sbjct: 129 RSNLAQSKLPV--DLVPIRLEIDADRYKLRDSFTWNLYDKCISLDQFAEQICIDYDIPLH 186 Query: 261 -ATFVPQMLHSIQGQLAEFRSYEGQE-------------------------MQVKEKIMP 362 V + SIQ Q+ ++ + Q + ++ +P Sbjct: 187 NVHIVQNISKSIQAQINDYEPRKAQSNLSFVSDVSSSTSETVYAHEPSDSLAKASKQQIP 246 Query: 363 ---------LKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAV 515 +K+D+ + + DQF W++ ES EEFA +C DL ++ E A+A Sbjct: 247 TVQNDLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSG-EFCTAVAH 305 Query: 516 CIREQ 530 IREQ Sbjct: 306 SIREQ 310 Score = 36.2 bits (82), Expect = 0.25 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%) Frame = +3 Query: 102 KFRMPTRDN--LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVP 275 K ++PT N + I++DI + D F WN P+S FA +L L F Sbjct: 242 KQQIPTVQNDLRILIKLDITIGRLNLIDQFEWNLFAPESSAEEFATVMCLDLGLSGEFCT 301 Query: 276 QMLHSIQGQLAEFRSY--------EGQEMQVKEK----IMPLKIDLRVNN 389 + HSI+ Q + Y +G E++ +E + PLK LR ++ Sbjct: 302 AVAHSIREQCQMYIKYLSLIGYLFDGSEIEDEEVRSYILPPLKNTLRFSD 351
>Q6CSR7:SFH1_KLULA Chromatin structure remodeling complex protein SFH1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 442 Score = 58.9 bits (141), Expect = 4e-08 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 6/144 (4%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVP------QMLHS 290 +VPIR+++E G + D F WN D FA ++L P P Q++ Sbjct: 210 MVPIRLNVEFSGHKLADFFMWNLNDHSMTPEQFATILCQDLDFPVLSNPNNSPYTQIISM 269 Query: 291 IQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCD 470 I QL E+ + +QV + + + + +++ + D F W++ + PE+FA + Sbjct: 270 INEQLQEYETL--ASLQVPDLHVIINLTANLDSKLYDDTFEWNLNDDSLCPEQFAELVVQ 327 Query: 471 DLNITDPEVGPAIAVCIREQLYEI 542 DL + E PAIA + E L ++ Sbjct: 328 DLGL-QREFVPAIAHSLHESLLKV 350 Score = 41.2 bits (95), Expect = 0.008 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Frame = +3 Query: 252 KLPATFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIM-PLKIDLRVNNTIVRDQFLWDIGN 428 ++ TFV + L + Q++ ++ IM P+++++ + + D F+W++ + Sbjct: 175 RIRETFVQSRIAISYKDLLGDSIQDPQQVDIESPIMVPIRLNVEFSGHKLADFFMWNLND 234 Query: 429 LESDPEEFARTLCDDLN---ITDPEVGP--AIAVCIREQLYE 539 PE+FA LC DL+ +++P P I I EQL E Sbjct: 235 HSMTPEQFATILCQDLDFPVLSNPNNSPYTQIISMINEQLQE 276 Score = 35.8 bits (81), Expect = 0.33 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 132 VPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQLAE 311 V I + +D + Y D F WN D FA+ ++L L FVP + HS+ L + Sbjct: 290 VIINLTANLDSKLYDDTFEWNLNDDSLCPEQFAELVVQDLGLQREFVPAIAHSLHESLLK 349 Query: 312 FR 317 + Sbjct: 350 VK 351
>Q754R8:SFH1_ASHGO Chromatin structure remodeling complex protein SFH1 - Ashbya| gossypii (Yeast) (Eremothecium gossypii) Length = 383 Score = 57.8 bits (138), Expect = 8e-08 Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 2/140 (1%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLP--ATFVPQMLHSIQGQ 302 ++PIR+++E +G + D FTWN D + FA+ ++L + Q++ +I Q Sbjct: 155 VIPIRLNLEHNGHKIIDFFTWNLNDHSLTLEQFAQIYCQDLDFAHNLSLQNQIVAAINDQ 214 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNI 482 L E+ + + V + + + + +++ + D F W++ + PE+FA + DL + Sbjct: 215 LQEYETL--ASVVVPDLHVIINLTCNLDSKLYEDNFEWNLNDQTLSPEQFAELVVQDLGL 272 Query: 483 TDPEVGPAIAVCIREQLYEI 542 T E PAIA + E + +I Sbjct: 273 T-REFMPAIAHALYESILKI 291 Score = 33.9 bits (76), Expect = 1.3 Identities = 16/62 (25%), Positives = 29/62 (46%) Frame = +3 Query: 132 VPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPATFVPQMLHSIQGQLAE 311 V I + +D + Y D F WN D FA+ ++L L F+P + H++ + + Sbjct: 231 VIINLTCNLDSKLYEDNFEWNLNDQTLSPEQFAELVVQDLGLTREFMPAIAHALYESILK 290 Query: 312 FR 317 + Sbjct: 291 IK 292
>Q06168:SFH1_YEAST Chromatin structure remodeling complex protein SFH1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 426 Score = 57.4 bits (137), Expect = 1e-07 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 1/144 (0%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL-PATFVPQMLHSIQGQL 305 ++PI +DIE G +D F WN D FA K+L + AT Q+ + I+ QL Sbjct: 203 MIPITLDIEHMGHTIKDQFLWNYNDDSISPEEFASIYCKDLDMTSATLQTQIANIIKEQL 262 Query: 306 AEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNIT 485 + + E+ ++ + + + + D F W++ + PE FA ++ DL +T Sbjct: 263 KDLENIAATEIMSDLHVI-INLTCNLQDRFFEDNFQWNLNDKSLTPERFATSIVQDLGLT 321 Query: 486 DPEVGPAIAVCIREQLYEIASQTV 557 E P I+ + E + +I V Sbjct: 322 -REFIPLISQSLHETILKIKKDWV 344
>Q9USM3:SFH1_SCHPO Chromatin structure remodeling complex protein SFH1 -| Schizosaccharomyces pombe (Fission yeast) Length = 418 Score = 54.3 bits (129), Expect = 9e-07 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 3/144 (2%) Frame = +3 Query: 120 RDNLVPIRVDIEV-DGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPA-TFVPQMLHSI 293 RD +PIR+DIE+ + R +D F WN + FA+ +L L + Q+ SI Sbjct: 114 RDVYIPIRLDIELPNNYRLKDTFLWNMNEQVMTPDVFAQILCADLDLSTNVYGTQISSSI 173 Query: 294 QGQLAEFRSYEGQEM-QVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCD 470 + Q+ E+ M + +E ++ I +++ DQ W++ + PEEF+ C+ Sbjct: 174 RAQIEEYAPVAEVPMPKGQEMLVVFNIQVQLAQLSYNDQVEWNLTS-PLTPEEFSVLTCN 232 Query: 471 DLNITDPEVGPAIAVCIREQLYEI 542 DL ++ E P IA I E L ++ Sbjct: 233 DLGLSG-ESRPEIAYAIHECLLKL 255 Score = 45.8 bits (107), Expect = 3e-04 Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Frame = +3 Query: 345 KEKIMPLKIDLRV-NNTIVRDQFLWDIGNLESDPEEFARTLCDDLNITDPEVGPAIAVCI 521 ++ +P+++D+ + NN ++D FLW++ P+ FA+ LC DL+++ G I+ I Sbjct: 114 RDVYIPIRLDIELPNNYRLKDTFLWNMNEQVMTPDVFAQILCADLDLSTNVYGTQISSSI 173 Query: 522 REQLYEIA 545 R Q+ E A Sbjct: 174 RAQIEEYA 181
>Q6FTV3:SFH1_CANGA Chromatin structure remodeling complex protein SFH1 - Candida| glabrata (Yeast) (Torulopsis glabrata) Length = 403 Score = 50.4 bits (119), Expect = 1e-05 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 2/143 (1%) Frame = +3 Query: 129 LVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKL--PATFVPQMLHSIQGQ 302 L+PI +++E DAF WN D V F +L L + Q++ SI Q Sbjct: 177 LIPITLNVEHGNNTISDAFVWNVNDTSISVEDFVTTYCNDLGLYGNVSLHSQIVSSINEQ 236 Query: 303 LAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNI 482 + E + + + + + + + + D F W++ + PE+FA + DL + Sbjct: 237 IQELENV--ASLVIPDLEVVVNLTCTIQGKFFEDYFQWNLSDKSLSPEKFALIIVADLGL 294 Query: 483 TDPEVGPAIAVCIREQLYEIASQ 551 E P IA + E L + + Sbjct: 295 A-REFAPGIAHSLHEYLLHVKKE 316 Score = 38.1 bits (87), Expect = 0.066 Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Frame = +3 Query: 312 FRSYEGQEMQVKEK---IMPLKIDLRVNNTIVRDQFLWDIGNLESDPEEFARTLCDDLNI 482 +R Y E+ ++ ++P+ +++ N + D F+W++ + E+F T C+DL + Sbjct: 160 YRLYVPPELSTGQQEAILIPITLNVEHGNNTISDAFVWNVNDTSISVEDFVTTYCNDLGL 219 Query: 483 -TDPEVGPAIAVCIREQLYEI 542 + + I I EQ+ E+ Sbjct: 220 YGNVSLHSQIVSSINEQIQEL 240
>Q9JIR4:RIMS1_RAT Regulating synaptic membrane exocytosis protein 1 - Rattus| norvegicus (Rat) Length = 1615 Score = 32.7 bits (73), Expect = 2.8 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Frame = +2 Query: 104 VPHADEGQPGADTRRHRGGRPALQG---------RLHLEPPRSRLGGHHLRQEDGQGAQ 253 V D PGA R++G P+ Q R EPPR R L +++G+G Q Sbjct: 250 VSSQDTATPGAPLHRNKGAEPSQQALGPEQKQASRSRSEPPRERKKAPGLSEQNGKGGQ 308
>P87503:DPOL_ADE04 DNA polymerase - Human adenovirus 4 (HAdV-4)| Length = 1193 Score = 32.7 bits (73), Expect = 2.8 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 9/72 (12%) Frame = -1 Query: 728 HDIYNRLVQVPLLPFPNDASFAPK-----ILEHVH----CVVHGFTIRSKFWCSPFLRHF 576 HD+ +Q P L FP F K +++HVH C G + K CS RHF Sbjct: 186 HDVVQHQMQAPRLHFP--LKFLVKGTQVQLVQHVHPVQRCEHCGRLYKHKHECSARRRHF 243 Query: 575 SFSHSRNSLTSN 540 F H NS +SN Sbjct: 244 YFHHI-NSHSSN 254
>P53420:CO4A4_HUMAN Collagen alpha-4(IV) chain precursor - Homo sapiens (Human)| Length = 1690 Score = 32.3 bits (72), Expect = 3.6 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Frame = +2 Query: 107 PHADEGQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQAPGHLCPSDAP 286 P D G PGA+ G + G L L+ P+ R G G PGH C AP Sbjct: 784 PRGDPGCPGAE------GPAGIPGFLGLKGPKGREGHAGFPGVPGP----PGHSCERGAP 833 Query: 287 LHPGAIGRVPFLRGA----GDAGQGEDYAP 364 PG G +P G+ G GQ D P Sbjct: 834 GIPGQPG-LPGYPGSPGAPGGKGQPGDVGP 862
>Q62909:KIF2C_RAT Kinesin-like protein KIF2C - Rattus norvegicus (Rat)| Length = 671 Score = 31.6 bits (70), Expect = 6.2 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 17/165 (10%) Frame = +3 Query: 87 RSSTV-KFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPA 263 R STV + R+P ++N + + + + + ++ T +PR S V T L + + Sbjct: 59 RISTVSEVRIPAQENEMEVELPVSTNSRKPFPIHTGHPRPSCSTV------TELPLLMIS 112 Query: 264 TFVPQMLHSIQ-------GQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFLWDI 422 + HS + G +S +EM EK+ + + R N+ +R + + Sbjct: 113 EEAEEQAHSTRSTSSANPGNSVRRKSCIVKEM---EKMKNKREEKRAQNSEIRIKRAQEY 169 Query: 423 GNLESDPE-EFARTL--------CDDLNITDPEVGPAIAVCIREQ 530 N S P EFAR + C+ L +TDP I VC+R++ Sbjct: 170 DN--SFPNWEFARMIKEFRVTMDCNPLTVTDPIEEHRICVCVRKR 212
>Q9VW71:FAT2_DROME Putative fat-like cadherin-related tumor suppressor homolog precursor| - Drosophila melanogaster (Fruit fly) Length = 4705 Score = 31.6 bits (70), Expect = 6.2 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 13/74 (17%) Frame = -1 Query: 653 LEHVHCVVHG----FTIRSKFWCSPFLRHFSFSHSRNSLTSNLIKL---------LTDAN 513 +EH+ ++ G I S C L+ S S RN L + K L D + Sbjct: 4296 IEHISGIISGVAVVLVIISCVLCCVVLKRSSSSKRRNRLEKDKNKSSYKEANLNSLVDKD 4355 Query: 512 SYCRPNFRICNVQI 471 +YC+PN ++ N+++ Sbjct: 4356 NYCKPNVKLSNLEV 4369
>Q05785:ENT2_YEAST Epsin-2 - Saccharomyces cerevisiae (Baker's yeast)| Length = 613 Score = 31.6 bits (70), Expect = 6.2 Identities = 25/110 (22%), Positives = 45/110 (40%) Frame = +3 Query: 84 PRSSTVKFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEVITFAKRTAKELKLPA 263 P S+ ++ L R+ + D QR R+ ++ DPD + + +ELK Sbjct: 169 PHDSSPSYQDDLEKALEESRITAQEDEQRRRELAQYDDEDPDFQAALQLSKEEEELK--- 225 Query: 264 TFVPQMLHSIQGQLAEFRSYEGQEMQVKEKIMPLKIDLRVNNTIVRDQFL 413 Q L +Q Q ++ Q + + P D+ N I +D++L Sbjct: 226 --QLQELQRLQKQQQSLSQFQAPLQQQQPQQQPAYYDI-FGNPISQDEYL 272
>Q9QZR9:CO4A4_MOUSE Collagen alpha-4(IV) chain precursor - Mus musculus (Mouse)| Length = 1682 Score = 31.6 bits (70), Expect = 6.2 Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 12/98 (12%) Frame = +2 Query: 107 PHADEGQPGADTRRHR---------GGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQAP 259 P + G PGA + + GG P + G L+ P+ R G G +P Sbjct: 761 PPGERGLPGAPGMKGQKGHPGCPGAGGPPGIPGSPGLKGPKGREGSRGFPGIPG----SP 816 Query: 260 GHLCPSDAPLHPGAIG--RVPFLRGA-GDAGQGEDYAP 364 GH C AP PG G P GA G GQ D P Sbjct: 817 GHSCERGAPGIPGQPGLPGTPGDPGAPGWKGQPGDMGP 854
>P30754:CAFF_RIFPA Fibril-forming collagen alpha chain - Riftia pachyptila (Tube worm)| Length = 1027 Score = 31.2 bits (69), Expect = 8.1 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Frame = +2 Query: 122 GQPGADTRRHRGGRPALQGRLHLEPPRSRLGGHHLRQEDGQGAQ--APGHLCPSDAPLHP 295 G PG+D R + GRP ++G+ + + G L G+ A G + AP P Sbjct: 373 GNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGPPGARGEPGKNGAPGEP 432 Query: 296 GAIGRVPFLRGAGDAGQ 346 GA G GDAG+ Sbjct: 433 GAHGE------QGDAGK 443 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 177,414,397 Number of extensions: 3757812 Number of successful extensions: 10895 Number of sequences better than 10.0: 25 Number of HSP's gapped: 10852 Number of HSP's successfully gapped: 50 Length of query: 373 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 258 Effective length of database: 69,142,514 Effective search space: 17838768612 Effective search space used: 17838768612 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
