>LOC_Os03g43480:12003.t03743:unspliced-genomic AGG2, putative, expressed|
          Length = 4120
 Score = 72.5 bits (152), Expect(3) = 2e-21
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +3 / +3

                                        
Query: 99   TTGVAYQSWDRWFEGPQDLRRCKCWFL* 182
            TTG A QSWDRWFEGPQDLRRCKCWFL*
Sbjct: 3948 TTGPACQSWDRWFEGPQDLRRCKCWFL* 4031



 Score = 36.3 bits (73), Expect(3) = 2e-21
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +3 / +1

                                
Query: 3    ELEKLNKMDKVSAALQEFVV 62
            ELE+L+K DKVSAALQE+V+
Sbjct: 3634 ELEELDKTDKVSAALQEYVL 3693



 Score = 29.9 bits (59), Expect(3) = 2e-21
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +3 / +3

                          
Query: 57   VVTIESKADPLLPV 98
            +VT ESKADPLLPV
Sbjct: 3822 MVTAESKADPLLPV 3863



 Score = 69.3 bits (145), Expect(3) = 5e-19
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = -3 / -1

                                        
Query: 181  HKNQHLHLRRSCGPSNHLSQDW*ATPVV 98
            HKNQHLHLRRSCGPSNHLSQDW A PVV
Sbjct: 4030 HKNQHLHLRRSCGPSNHLSQDWQAGPVV 3947



 Score = 37.3 bits (75), Expect(3) = 5e-19
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2 / -2

                             
Query: 53   LLQCC*HLIHFI*LFKF 3
            LLQCC*HLI FI LFKF
Sbjct: 3684 LLQCC*HLIRFIKLFKF 3634



 Score = 24.4 bits (47), Expect(3) = 5e-19
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2 / -3

                             
Query: 92   K*RVCFAFNCYYKLLQC 42
            K*R+ FA  CY+K  +C
Sbjct: 3857 K*RIRFALRCYHKPGKC 3807



 Score = 51.0 bits (105), Expect(3) = 3e-13
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = -2 / -3

                                        
Query: 182  SQKPAFASTQILRTFKPPIPRLVSNSGS 99
            SQKPAFAS QILRTFKP +PRL S   S
Sbjct: 4031 SQKPAFASAQILRTFKPSVPRLASRPSS 3948



 Score = 30.9 bits (61), Expect(3) = 3e-13
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3 / -1

                                    
Query: 97   TGSRGSALLSIVTTNSCNAADTLS 26
            TGSRGSALLS VT +  N    +S
Sbjct: 3862 TGSRGSALLSAVTISLVNVNSAIS 3791



 Score = 29.0 bits (57), Expect(3) = 3e-13
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 36   TPYPFYLAFQVP 1
            TPYPFY A QVP
Sbjct: 3667 TPYPFYQALQVP 3632



 Score = 51.5 bits (106), Expect(2) = 4e-11
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = +1 / +1

                                     
Query: 109  LLTSLGIGGLKVRRICVDANAGFCD 183
            LL SLG  GLKVR+IC DANAGFCD
Sbjct: 3958 LLASLGTDGLKVRKICADANAGFCD 4032



 Score = 39.6 bits (80), Expect(2) = 4e-11
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1 / +2

                              
Query: 1    RNLKS*IKWIRCQQHCKS 54
            RNLKS IK IRCQQHCKS
Sbjct: 3632 RNLKSLIKRIRCQQHCKS 3685



 Score = 48.3 bits (99), Expect(2) = 1e-08
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1 / -2

                                        
Query: 183  VTKTSICIYADPADLQTTYPKTGKQLR* 100
            +TKTSICI AD ADLQT  PKTGKQ +*
Sbjct: 4032 ITKTSICICADLADLQTICPKTGKQAQ* 3949



 Score = 34.5 bits (69), Expect(2) = 1e-08
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -3 / -3

                                
Query: 61   TTNSCNAADTLSILFSFSSS 2
            +T SCNAADTLS+L S SSS
Sbjct: 3692 STYSCNAADTLSVLSSSSSS 3633



 Score = 47.3 bits (97), Expect(2) = 1e-07
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = +2 / +2

                                                         
Query: 98   NYRSCLPVLG*VV*RSAGSA*MQMLVFVTKWQESKSDTKTQATAR 232
            +Y +CLPVLG +V*RSA SA MQMLVFV   ++ +  T   A  +
Sbjct: 3947 DYWACLPVLGQMV*RSARSAQMQMLVFVILGKQHRGQTMIAANCK 4081



 Score = 31.8 bits (63), Expect(2) = 1e-07
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2 / +3

                              
Query: 2    GT*KAK*NG*GVSSIARV 55
            GT*+A *NG*GVSSIARV
Sbjct: 3633 GT*RA**NG*GVSSIARV 3686

>LOC_Os11g35710:12011.t03118:unspliced-genomic cycloartenol synthase, putative, expressed|
          Length = 17288

 Score = 35.0 bits (70), Expect = 0.40
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3 / +3

                                               
Query: 271  AEIVKKLYGKRIGPRCCLCFGVTLTFLPFCHKNQH 167
            A ++KK+YG+ I  +CC C+ V +  L  C  ++H
Sbjct: 9333 AMLMKKIYGEIIILKCCRCYPVDILPLYICFLHRH 9437

>LOC_Os02g04520:12002.t00351:unspliced-genomic AGG2, putative, expressed|
          Length = 2730

 Score = 28.1 bits (55), Expect(2) = 0.45
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3 / +1

                                     
Query: 99   TTGVAYQSWDRWFEGPQDLRRCKCW 173
            T G    SW+RWF+  +  R  K W
Sbjct: 2329 TIGPENASWERWFQRVRSSRSNKWW 2403



 Score = 24.0 bits (46), Expect(2) = 0.45
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3 / +1

                          
Query: 57   VVTIESKADPLLPV 98
            + + E K+DPLLPV
Sbjct: 2182 ITSTEGKSDPLLPV 2223

>LOC_Os08g18860:12008.t01707:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 1554

 Score = 33.1 bits (66), Expect = 1.4
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2 / +3

                                
Query: 326  KS*SVLPCSIVPFSYNSFSR 267
            KS S++PC+++PFS N F R
Sbjct: 1221 KSISIVPCALLPFSINKFKR 1280

>LOC_Os03g43890:12003.t03779:unspliced-genomic WD-40 repeat protein MSI1, putative, expressed|
          Length = 8200

 Score = 28.1 bits (55), Expect(2) = 1.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2 / +2

                                                      
Query: 221  LVFWCHSYFLAILSQKPAFASTQILRTFKPPIPRLVSNSGSY 96
            L+F+C S F ++ S      S  I+RT   P+   +  SGS+
Sbjct: 1835 LLFYCWSVFFSVFSF*FVSCSLFIVRTV*SPLRNSIGLSGSF 1960



 Score = 27.2 bits (53), Expect(2) = 1.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2 / +2

                                 
Query: 80   CFAFNCYYKLLQCC*HLIHFI 18
            CF F C     Q   HL HF+
Sbjct: 6878 CFLFTCQNNFYQSIAHLFHFV 6940

>LOC_Os11g42320:12011.t03763:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6111

 Score = 32.7 bits (65), Expect = 2.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3 / +3

                                            
Query: 351  LLHSGALHYLWTLLLVKYEILAQECRPSLRNY 446
            LL     H LW++LL  + I  ++CR SL  Y
Sbjct: 3390 LLEDFVHHALWSILLCHHAIRTEKCRSSLSTY 3485

>LOC_Os09g06750:12009.t00471:unspliced-genomic hypothetical protein|
          Length = 696

 Score = 32.7 bits (65), Expect = 2.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3 / +3

                                         
Query: 229 RCCLCFGVTLTFLPFCHKNQHLHLRRSCGP 140
           RC  CF  T+     C +  H  +RRSC P
Sbjct: 462 RCRSCFDATIV*FASCARRCHRQIRRSCPP 551

>LOC_Os08g06100:12008.t00500:unspliced-genomic quercetin 3-O-methyltransferase 1, putative, expressed|
          Length = 3209

 Score = 32.7 bits (65), Expect = 2.0
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -3 / +1

                                                           
Query: 169  HLHLRRSCGPSNHLSQDW*ATPVVTGSRGSALLSIVTTNSCNAADTL 29
            HLHLR+  G   H   DW*+  +V   +G    S  +  SC+++ ++
Sbjct: 2875 HLHLRQRLGHRVHQVGDW*SIAIVELDQGVRPSSSSSRTSCSSSKSV 3015

>LOC_Os01g16870:12001.t01536:unspliced-genomic argonaute-like protein, putative, expressed|
          Length = 7589

 Score = 32.2 bits (64), Expect = 2.7
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3 / -2

                                    
Query: 304  VP*YPSHTIPSAEIVKKLYGKRIG 233
            +P  PSH  PS + +K  YGKRIG
Sbjct: 2776 IPYSPSHHHPSQQNLKDCYGKRIG 2705

>LOC_Os03g05140:12003.t00387:unspliced-genomic receptor-like protein kinase 5 precursor, putative, expressed|
          Length = 3459

 Score = 31.8 bits (63), Expect = 3.7
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -3 / +1

                                               
Query: 202  LTFLPFCHKNQHLHLRRSCGPSNHLSQDW*ATPVV 98
            LT    C    H HLRR CG  +H+S      PVV
Sbjct: 2017 LTHEAHCRWLGHRHLRRDCGMRSHVSWQAAVPPVV 2121

>LOC_Os01g49800:12001.t04418:unspliced-genomic hypothetical protein|
          Length = 1075

 Score = 31.8 bits (63), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3 / -3

                                           
Query: 69  ESKADPLLPVTTGVAYQSWDRWFEGPQDLRRC 164
           E+   P +     VA+  W RW  G  D RRC
Sbjct: 797 EAARGPRIGTVREVAWGRWSRWIRGRGDHRRC 702

>LOC_Os04g14410:12004.t01260:unspliced-genomic expressed protein|
          Length = 7636

 Score = 31.8 bits (63), Expect = 3.7
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -1 / +2

                                                          
Query: 453  SSHNFSDLDDILELRSHTSPTAESRGNVMHQNAIDRKNLLKNKVLV 316
            S HNF  L  +++L  HT+ T+ S  +++ +     K +L NK ++
Sbjct: 3398 SLHNFV*LRKVMKLGKHTTLTSPSA*HLLQRKG*KAKKILHNKEII 3535

>LOC_Os06g09090:12006.t00788:unspliced-genomic glutamate receptor 2.8 precursor, putative, expressed|
          Length = 3830

 Score = 31.3 bits (62), Expect = 5.1
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -2 / +3

                                                             
Query: 263  CEETLWEKNRSSLLLVFWCHSYFLAILSQKPAFASTQILRTFKPPIPRL 117
            C   + +   S +++V WC    + + S   +F+S   ++ FKP +  L
Sbjct: 2493 CTGQIIKSPLSKIVVVIWCFVVLVLVQSYTASFSSILTVKRFKPSVTYL 2639

>LOC_Os02g32530:12002.t02896:unspliced-genomic SAM domain family protein, expressed|
          Length = 4430

 Score = 31.3 bits (62), Expect = 5.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2 / +2

                                             
Query: 317  SVLPCSIVPFSYNSFSRDCEETLWEKNRSSLLL 219
            S +PCS++    NSF  D  E L    R S+LL
Sbjct: 3611 SSIPCSLLVLPVNSFCSDWAEVLKATERGSVLL 3709

>LOC_Os01g47750:12001.t04221:unspliced-genomic splicing factor U2AF 35 kDa subunit, putative, expressed|
          Length = 4362

 Score = 31.3 bits (62), Expect = 5.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2 / +3

                                               
Query: 416  SRMSSKSEKLCELSYSFHLVVKLDILKSTFNNEKK 520
            +R+S++   + ELS++FHLV +L        N KK
Sbjct: 1176 TRLSNRMTSMAELSFAFHLVERLKSWGVAIRNLKK 1280

>LOC_Os12g27710:12012.t02482:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6111

 Score = 30.9 bits (61), Expect = 7.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3 / +3

                                            
Query: 351  LLHSGALHYLWTLLLVKYEILAQECRPSLRNY 446
            LL     H LW+LLL  + +  ++CR +L  Y
Sbjct: 3390 LLEDFIHHALWSLLLCHHAVRTKKCRSNLSTY 3485

>LOC_Os11g28640:12011.t02476:unspliced-genomic hypothetical protein|
          Length = 384

 Score = 30.9 bits (61), Expect = 7.0
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +3 / +1

                                                        
Query: 33  VSAALQEFVVTIESKADPLLPVTTGVAYQSWDRWFEGPQDLRRCK 167
           V  A     V  +  A P++ V      Q W RW   P+   R K
Sbjct: 133 VDGASVRLAVANDESAHPIIVVDRNRVPQGWQRWIRPPRSCARAK 267

>LOC_Os09g04660:12009.t00362:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4575

 Score = 30.9 bits (61), Expect = 7.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -2 / +3

                                                
Query: 311  LPCSIVPFSYNSFSRDCEETLWEKNRSSLLLVFWCH 204
            +P +IV      FS  C  TLW K  + LL    CH
Sbjct: 3342 MPSTIVLDRDTKFSSHCWRTLWNKLGTKLLFSTTCH 3449

>LOC_Os05g50970:12005.t04527:unspliced-genomic catalytic/ protein phosphatase type 2C/ protein serine/threonine|
            phosphatase, putative, expressed
          Length = 5067

 Score = 30.9 bits (61), Expect = 7.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2 / +3

                             
Query: 248  WEKNRSSLLLVFWCHSY 198
            W   R+ ++L+FWC SY
Sbjct: 1182 WRNRRTLIMLLFWCRSY 1232

>LOC_Os05g16690:12005.t01439:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 4143

 Score = 30.9 bits (61), Expect = 7.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3 / +3

                                            
Query: 351  LLHSGALHYLWTLLLVKYEILAQECRPSLRNY 446
            LL     H LW+LLL  + +  ++CR +L  Y
Sbjct: 1422 LLEDFIHHALWSLLLCHHAVRTKKCRSNLSTY 1517

>LOC_Os01g27210:12001.t02425:unspliced-genomic glutathione S-transferase IV, putative, expressed|
          Length = 1516

 Score = 30.9 bits (61), Expect = 7.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2 / -3

                                                     
Query: 302  SIVPFSYNSFSRDCEETLWEKNRSSLLLVFWCHSYFLAILS 180
            S  P +++SF      T W ++R S LL+  CH   L   S
Sbjct: 1064 SYTPSTFSSFRTLSSTTPWSRSRPSNLLMMQCHRMGLTAAS 942

>LOC_Os04g58920:12004.t05353:unspliced-genomic ubiquitin-protein ligase, putative, expressed|
          Length = 1699

 Score = 30.4 bits (60), Expect = 9.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3 / -1

                                                      
Query: 163  HLRRSCGPSNHLSQDW*ATPVVTGSRGSALLSIVTTNSCNAA 38
            H RRS GPS  +S      P  T         +V T++C+AA
Sbjct: 1024 HPRRSTGPSRSMSTSTATAPASTAFTRLRPHDVVPTSTCSAA 899

>LOC_Os03g43720:12003.t03763:unspliced-genomic synaptic vesicle 2-related protein, putative, expressed|
          Length = 4806

 Score = 30.4 bits (60), Expect = 9.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3 / -1

                                     
Query: 324  LCSSISSFYLLHSGALHYLWTLLLV 398
            L S IS  Y+L +  +HYLW LL++
Sbjct: 2508 LVSEISLDYVLETKYMHYLWFLLIL 2434


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 203,346,418
Number of extensions: 3067983
Number of successful extensions: 11273
Number of sequences better than 10.0: 23
Length of query: 177
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 129
Effective length of database: 52,912,542
Effective search space: 6825717918
Effective search space used: 6825717918
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)