ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf15c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6CG48:NUDF_YARLI Nuclear distribution protein PAC1 - Yarrowia l... 31 2.3
2Q91502:SC6A8_TORMA Creatine transporter - Torpedo marmorata (Mar... 30 6.6
3Q0C9E6:SET9_ASPTN Histone-lysine N-methyltransferase set9 - Aspe... 29 8.7

>Q6CG48:NUDF_YARLI Nuclear distribution protein PAC1 - Yarrowia lipolytica (Candida|
           lipolytica)
          Length = 437
 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
 Frame = +3

Query: 3   ELEKLNKMDKVSAALQEFVVTIESKADPLLPV------TTGVAYQSWDRWFEGPQDLRRC 164
           +L+K +    VS +  + +    S+ DPLL +        GV      R+     D +  
Sbjct: 325 KLDKTSSYFVVSWSRDKTIRVWSSRGDPLLILRGHDNWVRGVVLHPAGRYLVSVSDDKTM 384

Query: 165 KCWFL*QNGKKVRVTPKH 218
           +CW L Q G+ +RV   H
Sbjct: 385 RCWDLEQGGRCIRVVDAH 402



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>Q91502:SC6A8_TORMA Creatine transporter - Torpedo marmorata (Marbled electric ray)|
          Length = 611

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 10/37 (27%), Positives = 28/37 (75%)
 Frame = -2

Query: 233 SSLLLVFWCHSYFLAILSQKPAFASTQILRTFKPPIP 123
           +S+++VF+C++Y++ +L+    ++S  ++++F  P+P
Sbjct: 120 ASMVIVFFCNTYYILVLT----WSSFYLVQSFSSPLP 152



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>Q0C9E6:SET9_ASPTN Histone-lysine N-methyltransferase set9 - Aspergillus terreus|
           (strain NIH 2624)
          Length = 629

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 99  TTGVAYQSWDRWFEGPQDLRRCKCWFL*QNGKKVR 203
           T+ +  QS+DRW E     R CK WFL  N    R
Sbjct: 499 TSKLLAQSYDRWVE----CRTCKTWFLQHNSYLTR 529


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 83,727,980
Number of extensions: 1634992
Number of successful extensions: 3789
Number of sequences better than 10.0: 3
Number of HSP's gapped: 3788
Number of HSP's successfully gapped: 3
Length of query: 177
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 71
Effective length of database: 71,611,169
Effective search space: 5084392999
Effective search space used: 5084392999
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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