ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf14m09 |
|---|---|
| Clone Library Name | barley_pub |
>AK111642:Os05g0275700 | Length = 342 Score = 451 bits (1161), Expect = e-127 Identities = 220/245 (89%), Positives = 227/245 (92%) Frame = +1 Query: 1 FLIWRFSIWVDKPTPGNALMNLRYRDERAAPIAGKEVRTGLEGPGLSVSQKILYCISTVG 180 FLIWRFSIWVDKPTPGNALMNLRYRDERAAPI GKEVRTGLEGPGLSVSQK+LYCISTVG Sbjct: 98 FLIWRFSIWVDKPTPGNALMNLRYRDERAAPITGKEVRTGLEGPGLSVSQKVLYCISTVG 157 Query: 181 GQYLLSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAVSFFNLLSFLYGGRYKTL 360 GQY+ SRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRA SFFNLL FLYG RYKT+ Sbjct: 158 GQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRASSFFNLLLFLYGARYKTI 217 Query: 361 VERILKARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMXXXXXXXXNSSSVKKFLLPFSKD 540 VERILKARLVY SPNMNRAVSFEYMNRQLVWNEFSEM NSSSVKKFLLPFSKD Sbjct: 218 VERILKARLVYESPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKKFLLPFSKD 277 Query: 541 KSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 720 KSASSSGDEA+CPIC SSPSIPF ALPCQHRYCYYCL+TR AAT+SYRCARCNE+VVAIQ Sbjct: 278 KSASSSGDEADCPICRSSPSIPFEALPCQHRYCYYCLQTRCAATNSYRCARCNEIVVAIQ 337 Query: 721 RHGSS 735 R GSS Sbjct: 338 RQGSS 342
>AK063254:Os07g0626900 | Length = 259 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/63 (38%), Positives = 33/63 (52%) Frame = +1 Query: 547 ASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 726 +++S +E NC IC +S S PC HR CY C+ +S RC CN VV ++ R Sbjct: 190 STASNEEDNCCICYNSDSDTTFE-PCHHRSCYGCITRH--LLNSQRCFFCNAVVTSVTRI 246 Query: 727 GSS 735 S Sbjct: 247 ADS 249
>AK102094:Os04g0177300 | Length = 664 Score = 38.1 bits (87), Expect = 0.010 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = +1 Query: 559 GDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 708 G CPIC+ S S V PC HR C CL + S C C + Sbjct: 423 GATTECPICLESASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPI 472
>Os07g0642400:Os07g0642400 | Length = 821 Score = 37.4 bits (85), Expect = 0.018 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +1 Query: 544 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 S GD+ CPIC++ P+ V C H YC C+ + +SS RC C Sbjct: 565 SLVDDGDDFECPICLAPPA-KTVITSCTHIYCQTCI-MKILKSSSSRCPIC 613
>AK102789:Os08g0414200 | Length = 531 Score = 36.6 bits (83), Expect = 0.030 Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 13/131 (9%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSS----YRCARCNEV---VVAIQR 723 E +C IC + S LPC HR+CY C++ + + SS C C + I Sbjct: 380 ELSCVICWTDFSSTRGILPCGHRFCYSCIQEWADSLSSRGKVSTCPLCKTSFAWISKIDE 439 Query: 724 HGSS*FYLDSRILAQTRTLCCKLERFFAHYHQIFEAPVYIL*TRSKDKLVYGYWWCK--- 894 G+S D +I +QT + F IF+ VY L + C+ Sbjct: 440 AGTS----DQKIYSQTIPCSTSTDTF------IFDDRVYGLPESPSGQGACYQCHCREPE 489 Query: 895 ---TSCFVCRS 918 SC VCRS Sbjct: 490 ELLLSCHVCRS 500
>AK072042:Os12g0267900 | Length = 391 Score = 35.4 bits (80), Expect = 0.068 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +1 Query: 562 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 708 +E +C IC+ P PC H +C CL+ +AA RC +C +++ Sbjct: 160 EELSCAICLEICFEPSTT-PCGHSFCMKCLK-HAAAKCGKRCPKCRQLI 206
>AK102433:Os05g0512000 | Length = 987 Score = 34.7 bits (78), Expect = 0.12 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +1 Query: 544 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 S G E CPIC+S S V++ C H +C CL +TSS C C Sbjct: 6 SLEKMGRELKCPICLSLLSSA-VSISCNHVFCNDCLTESMKSTSS--CPVC 53
>AK068618:Os02g0516600 | Length = 744 Score = 33.9 bits (76), Expect = 0.20 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCL 651 E CPIC+ SP P + C H YC+ C+ Sbjct: 238 EVQCPICLESPLCPQIT-SCGHIYCFPCI 265
>AK104335:Os01g0954400 | Length = 280 Score = 33.1 bits (74), Expect = 0.34 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Frame = +1 Query: 523 LPFSKDKSASSSGDEAN----CPICVSSPSIPFVALP--CQHRYCYYCLRTRSAATSSYR 684 LP K + GD A C IC+ ++ AL C H YC C+ ++ + + Sbjct: 31 LPIDKAAAVGGGGDRAVDCGVCAICLDKIALQETALVKGCDHAYCVTCILRWASYKQTPQ 90 Query: 685 CARCNEVVVAIQRHGS 732 C +C + H S Sbjct: 91 CPQCKHPFDFLSVHRS 106
>AK065709:Os01g0954400 | Length = 280 Score = 33.1 bits (74), Expect = 0.34 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Frame = +1 Query: 523 LPFSKDKSASSSGDEAN----CPICVSSPSIPFVALP--CQHRYCYYCLRTRSAATSSYR 684 LP K + GD A C IC+ ++ AL C H YC C+ ++ + + Sbjct: 31 LPIDKAAAVGGGGDRAVDCGVCAICLDKIALQETALVKGCDHAYCVTCILRWASYKQTPQ 90 Query: 685 CARCNEVVVAIQRHGS 732 C +C + H S Sbjct: 91 CPQCKHPFDFLSVHRS 106
>AK063375:Os02g0527100 | Length = 810 Score = 33.1 bits (74), Expect = 0.34 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNE 702 E CPIC+ + V PC HR C CL + + S+ C C + Sbjct: 572 EGECPICLEAFE-DAVLTPCAHRLCRECLLSSWRSASAGLCPVCRK 616
>AK111614:Os02g0771100 | Length = 685 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +1 Query: 544 SASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRC 687 SA +G+ A CPIC++ F+ C H +CY C+ T + S C Sbjct: 45 SAGGNGEAAADRDLLCPICMAVIKDAFLTA-CGHSFCYMCIVTHLSHKSDCPC 96
>AK102740:Os02g0771100 | Length = 685 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +1 Query: 544 SASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRC 687 SA +G+ A CPIC++ F+ C H +CY C+ T + S C Sbjct: 45 SAGGNGEAAADRDLLCPICMAVIKDAFLTA-CGHSFCYMCIVTHLSHKSDCPC 96
>AB040053:Os02g0771100 | Length = 685 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +1 Query: 544 SASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRC 687 SA +G+ A CPIC++ F+ C H +CY C+ T + S C Sbjct: 45 SAGGNGEAAADRDLLCPICMAVIKDAFLTA-CGHSFCYMCIVTHLSHKSDCPC 96
>Os04g0289800:Os04g0289800 | Length = 750 Score = 30.4 bits (67), Expect = 2.2 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +1 Query: 571 NCPICVSSPSIPFVALPCQHRYCYYCLR 654 NC C+ P P V PC H +C C R Sbjct: 143 NCSFCMLLPERP-VTTPCGHNFCLKCFR 169
>AK101592:Os11g0175500 | Length = 478 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = +1 Query: 562 DEANCPICVSSPSIPFVALPCQHRYCYYCLR---TRSAATS-----SYRCARCNEVVVAI 717 + A C IC++ PC H +C C RS+A S S C +C V ++ Sbjct: 140 ENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSANSRDKSQSAACPQCRTAVQSV 199 Query: 718 QRH 726 R+ Sbjct: 200 GRN 202
>AK101136:Os05g0102600 | Length = 789 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/52 (26%), Positives = 22/52 (42%) Frame = +1 Query: 559 GDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 714 G +C C+ P P V PC H +C C + + + C +C + A Sbjct: 129 GKNFSCAFCMKLPERP-VTTPCGHNFCLKCFQ-KWIHSGKRTCGKCRAQIPA 178
>AK065454:Os07g0673200 | Length = 321 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 Query: 574 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAAT 672 C IC+ + P VAL C H YCY C + ++ T Sbjct: 217 CSICLDTVFDP-VALSCGHIYCYLCSCSAASVT 248
>AK064320:Os11g0175500 | Length = 508 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = +1 Query: 562 DEANCPICVSSPSIPFVALPCQHRYCYYCLR---TRSAATS-----SYRCARCNEVVVAI 717 + A C IC++ PC H +C C RS+A S S C +C V ++ Sbjct: 140 ENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSANSRDKSQSAACPQCRTAVQSV 199 Query: 718 QRH 726 R+ Sbjct: 200 GRN 202
>Os07g0481300:Os07g0481300 | Length = 1094 Score = 30.0 bits (66), Expect = 2.8 Identities = 30/98 (30%), Positives = 41/98 (41%) Frame = +1 Query: 67 RYRDERAAPIAGKEVRTGLEGPGLSVSQKILYCISTVGGQYLLSRLQSFSAFRRWGDSEQ 246 R D A AG E R + + ++IL + +G + FRR D+ Sbjct: 37 RRLDAVGAAAAGAEAREARDAGARAWLREILDALYELG--------DARDDFRRAADAAA 88 Query: 247 RPLARRAWGLVQHAEGLYRAVSFFNLLSFLYGGRYKTL 360 RP RR Q EG + +F + LYG RYKTL Sbjct: 89 RP--RR-----QQEEGRRSFLHWFTIPPNLYGMRYKTL 119
>Os05g0497600:Os05g0497600 | Length = 823 Score = 30.0 bits (66), Expect = 2.8 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 E CPIC+ + C HR+C C+ +S + C C Sbjct: 111 EVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPAC 153
>AK120491:Os01g0796700 | Length = 556 Score = 30.0 bits (66), Expect = 2.8 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 E CPIC+ + C HR+C C+ +S + C C Sbjct: 177 EVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPAC 219
>Os07g0621500:Os07g0621500 | Length = 1686 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCL 651 E CPIC+ PF C H +C CL Sbjct: 1521 ENACPICLCEVEDPFKLESCGHVFCLTCL 1549
>AK073874:Os07g0508300 | Length = 348 Score = 29.6 bits (65), Expect = 3.7 Identities = 23/83 (27%), Positives = 33/83 (39%) Frame = +1 Query: 199 RLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAVSFFNLLSFLYGGRYKTLVERILK 378 +L+ R G Q+ + R A GLV + F+ + YGG E + K Sbjct: 49 QLEKLYTSTRSGRDFQKDIVRAAEGLVSIGIRHVEVGTKFSEDCYRYGGESSASDEALAK 108 Query: 379 ARLVYGSPNMNRAVSFEYMNRQL 447 A +YG N +E NR L Sbjct: 109 AASLYGGALRNVEKEYEEFNRIL 131
>AK067148:Os01g0374900 | Length = 313 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/53 (32%), Positives = 23/53 (43%) Frame = +1 Query: 538 DKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 DK+A C +C+S P V LPC+H CL A Y+ +C Sbjct: 234 DKNAHEDDSGKECVVCLSEPRDTAV-LPCRH----MCLCRECAQVLKYQTNKC 281
>Os11g0574200:Os11g0574200 | Length = 893 Score = 29.3 bits (64), Expect = 4.8 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = +1 Query: 565 EANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 E CPIC+ + C HR+C C+ +S + C C Sbjct: 96 EVQCPICLGIIQKARIITECLHRFCRDCIE-KSMWLGNDECPAC 138
>AK073786:Os09g0419500 | Length = 398 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +1 Query: 544 SASSSGDEANCPICVSS-PSIPFVALP-CQHRYCYYCLRTRSAA 669 ++SS+ E C IC+ + +I A+P C H +C C+R AA Sbjct: 176 ASSSASSEFYCTICMETVDAIERFAIPGCTHAFCASCVRQYIAA 219
>Os12g0209700:Os12g0209700 | Length = 1432 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 562 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 + +C IC V CQH +CY C+ SA T+ RC C Sbjct: 193 ENESCGICRDIVIDRGVLDCCQHWFCYTCIDNWSAITN--RCPLC 235
>Os01g0689300:Os01g0689300 | Length = 1242 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = +1 Query: 559 GDEANCPIC---VSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 696 G E NCPIC + + S ALPC H C + + S Y C C Sbjct: 1071 GLETNCPICCDFLFTSSAAVRALPCGHFMHSACFQAYTC--SHYTCPIC 1117
>Os10g0494500:Os10g0494500 | Length = 502 Score = 28.5 bits (62), Expect = 8.3 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 616 LPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 720 +PC+H +C C R+ S+ C C+E + IQ Sbjct: 122 IPCEHAFCLACARSDSS------CYLCDERIQKIQ 150 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 32,054,226 Number of extensions: 765292 Number of successful extensions: 2029 Number of sequences better than 10.0: 30 Number of HSP's gapped: 2023 Number of HSP's successfully gapped: 30 Length of query: 350 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 248 Effective length of database: 11,315,673 Effective search space: 2806286904 Effective search space used: 2806286904 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
