ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf12d18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete se... 48 0.098
2emb|AL713860.12| Mouse DNA sequence from clone RP23-446K18 on ch... 48 0.098
3emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the... 48 0.098
4dbj|AK241794.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 46 0.39
5ref|NM_001055462.1| Oryza sativa (japonica cultivar-group) Os03g... 46 0.39
6gb|AF494084.1| Nicotiana benthamiana SKP1 mRNA, complete cds 46 0.39
7gb|AC149642.2| Medicago truncatula chromosome 2 BAC clone mth2-6... 46 0.39
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.39
9gb|AC157678.2| Xenopus tropicalis clone ISB1-130B13, complete se... 46 0.39
10gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.39
11dbj|AK102965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.39
12gb|AF070967.1|AF070967 Nicotiana clevelandii SKP1-like protein m... 46 0.39
13gb|AC149694.2| Bos taurus BAC CH240-423C21 (Children's Hospital... 44 1.5
14emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 i... 44 1.5
15gb|AC132381.4| Mus musculus BAC clone RP23-424F5 from chromosome... 44 1.5
16gb|AC135452.2| Homo sapiens 3 BAC RP11-507A10 (Roswell Park Canc... 44 1.5
17emb|BX936450.6| Zebrafish DNA sequence from clone CH211-232I12 i... 44 1.5
18gb|AC131182.3| Homo sapiens BAC clone RP11-392B6 from 4, complet... 44 1.5
19gb|EF037378.1| Synthetic construct Bacillus anthracis clone FLH2... 42 6.0
20gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete ge... 42 6.0
21ref|XR_025888.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 6.0
22ref|XR_026160.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 6.0
23ref|NM_001067466.1| Oryza sativa (japonica cultivar-group) Os08g... 42 6.0
24ref|NM_001067464.1| Oryza sativa (japonica cultivar-group) Os08g... 42 6.0
25gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 42 6.0
26gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 42 6.0
27gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 42 6.0
28gb|AC146127.4| Pan troglodytes BAC clone RP43-23F10 from 7, comp... 42 6.0
29gb|AC005682.2| Homo sapiens BAC clone RP11-84K19 from 7, complet... 42 6.0
30gb|AC146006.2| Pan troglodytes BAC clone RP43-165A19 from 7, com... 42 6.0
31gb|AC146483.2| Pan troglodytes BAC clone RP43-30K12 from 7, comp... 42 6.0
32gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete s... 42 6.0
33gb|AC091053.11| Homo sapiens chromosome 11, clone RP11-152H18, c... 42 6.0
34ref|NM_060112.3| Caenorhabditis elegans SKp1 Related (ubiquitin ... 42 6.0
35emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chrom... 42 6.0
36emb|BX004801.15| Zebrafish DNA sequence from clone CH211-203K12 ... 42 6.0
37gb|AF440505.1| Caenorhabditis elegans SKR-1 (skr-1) mRNA, partia... 42 6.0
38dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.0
39emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chr... 42 6.0
40emb|AL096771.11|HSJ238D15 Human DNA sequence from clone RP1-238D... 42 6.0
41emb|AL353818.1|ATF14L2 Arabidopsis thaliana DNA chromosome 3, BA... 42 6.0
42emb|AL138641.2|ATT22K7 Arabidopsis thaliana DNA chromosome 3, BA... 42 6.0
43emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression o... 42 6.0
44gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, c... 42 6.0
45gb|AC018877.5| Homo sapiens BAC clone RP11-295K1 from 2, complet... 42 6.0
46dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 42 6.0
47gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, com... 42 6.0
48dbj|AK105651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.0
49dbj|AK068578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.0
50gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 42 6.0
51gb|AC005394.1|AC005394 Homo sapiens chromosome 19, cosmid F8518,... 42 6.0
52emb|AL935196.10| Zebrafish DNA sequence from clone DKEYP-79F4 in... 42 6.0
53emb|Z81072.1| Caenorhabditis elegans Cosmid F30A10, complete seq... 42 6.0 
>gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete sequence
          Length = 136675
 Score = 48.1 bits (24), Expect = 0.098
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 1327  attttgatgtgatgcagagcgtttgttt 1354
             |||||||||||||||||||| |||||||
Sbjct: 85251 attttgatgtgatgcagagcttttgttt 85224
to top
>emb|AL713860.12| Mouse DNA sequence from clone RP23-446K18 on chromosome 11 Contains the
              Ccl8 and Ccl1 genes for chemokine (C-C motif) ligand 8 and
              1, complete sequence
          Length = 129489

 Score = 48.1 bits (24), Expect = 0.098
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 1164   cattggtgatgtttttgataaaaa 1187
              ||||||||||||||||||||||||
Sbjct: 115081 cattggtgatgtttttgataaaaa 115104
to top
>emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 330D23 of library Caltech CITB-BAC from chromosome
             11 of Mus musculus (mouse)
          Length = 181075

 Score = 48.1 bits (24), Expect = 0.098
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 1164  cattggtgatgtttttgataaaaa 1187
             ||||||||||||||||||||||||
Sbjct: 54055 cattggtgatgtttttgataaaaa 54078
to top
>dbj|AK241794.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065208D18,
           full insert sequence
          Length = 857

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 110 ccctcttcgatctcatcctggct 132
           |||||||||||||||||||||||
Sbjct: 408 ccctcttcgatctcatcctggct 430
to top
>ref|NM_001055462.1| Oryza sativa (japonica cultivar-group) Os03g0141700 (Os03g0141700)
            mRNA, complete cds
          Length = 2028

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 679  ttcagacgtgaaagggatgatccccaactcatcac 713
            ||||| ||||| |||||||||||||| ||||||||
Sbjct: 1161 ttcaggcgtgacagggatgatccccagctcatcac 1195
to top
>gb|AF494084.1| Nicotiana benthamiana SKP1 mRNA, complete cds
          Length = 462

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 110 ccctcttcgatctcatcctggct 132
           |||||||||||||||||||||||
Sbjct: 269 ccctcttcgatctcatcctggct 291
to top
>gb|AC149642.2| Medicago truncatula chromosome 2 BAC clone mth2-62p11, complete
             sequence
          Length = 95165

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 222   taatatctttaacataaaaagtg 244
             |||||||||||||||||||||||
Sbjct: 85015 taatatctttaacataaaaagtg 84993
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 679     ttcagacgtgaaagggatgatccccaactcatcac 713
               ||||| ||||| |||||||||||||| ||||||||
Sbjct: 2280136 ttcaggcgtgacagggatgatccccagctcatcac 2280170
to top
>gb|AC157678.2| Xenopus tropicalis clone ISB1-130B13, complete sequence
          Length = 143383

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1445   cttgtatattttggaataaaggt 1467
              |||||||||||||||||||||||
Sbjct: 106725 cttgtatattttggaataaaggt 106747
to top
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 679   ttcagacgtgaaagggatgatccccaactcatcac 713
             ||||| ||||| |||||||||||||| ||||||||
Sbjct: 45932 ttcaggcgtgacagggatgatccccagctcatcac 45898
to top
>dbj|AK102965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115I21, full
            insert sequence
          Length = 2029

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 679  ttcagacgtgaaagggatgatccccaactcatcac 713
            ||||| ||||| |||||||||||||| ||||||||
Sbjct: 1162 ttcaggcgtgacagggatgatccccagctcatcac 1196
to top
>gb|AF070967.1|AF070967 Nicotiana clevelandii SKP1-like protein mRNA, complete cds
          Length = 769

 Score = 46.1 bits (23), Expect = 0.39
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 110 ccctcttcgatctcatcctggct 132
           |||||||||||||||||||||||
Sbjct: 305 ccctcttcgatctcatcctggct 327
to top
>gb|AC149694.2| Bos taurus  BAC CH240-423C21 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 186118

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 314   acaaggagctgccatgcagtga 335
             ||||||||||||||||||||||
Sbjct: 63058 acaaggagctgccatgcagtga 63037
to top
>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24,
             complete sequence
          Length = 175626

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1396  gtgtactctgtatttttatttt 1417
             ||||||||||||||||||||||
Sbjct: 30035 gtgtactctgtatttttatttt 30056
to top
>gb|AC132381.4| Mus musculus BAC clone RP23-424F5 from chromosome 1, complete sequence
          Length = 207002

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1396   gtgtactctgtatttttatttt 1417
              ||||||||||||||||||||||
Sbjct: 144462 gtgtactctgtatttttatttt 144483
to top
>gb|AC135452.2| Homo sapiens 3 BAC RP11-507A10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137095

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 366   ggaggaaaaggctttgcaggct 387
             ||||||||||||||||||||||
Sbjct: 28753 ggaggaaaaggctttgcaggct 28774
to top
>emb|BX936450.6| Zebrafish DNA sequence from clone CH211-232I12 in linkage group 17,
              complete sequence
          Length = 167918

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 952    actgaagctaccattgaagtcaatat 977
              ||||||||||| ||||||||||||||
Sbjct: 129788 actgaagctacaattgaagtcaatat 129813
to top
>gb|AC131182.3| Homo sapiens BAC clone RP11-392B6 from 4, complete sequence
          Length = 101396

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1059  tggtgaagcagcagcagaggttgaga 1084
             ||||||| ||||||||||||||||||
Sbjct: 86445 tggtgaaacagcagcagaggttgaga 86470
to top
>gb|EF037378.1| Synthetic construct Bacillus anthracis clone FLH241056.01L BA3844
            gene, complete sequence
          Length = 246

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1399 tactctgtatttttattttct 1419
            |||||||||||||||||||||
Sbjct: 179  tactctgtatttttattttct 159
to top
>gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete genome
          Length = 5257091

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1399    tactctgtatttttattttct 1419
               |||||||||||||||||||||
Sbjct: 3545564 tactctgtatttttattttct 3545544
to top
>ref|XR_025888.1| PREDICTED: Strongylocentrotus purpuratus similar to LOC398512 protein
            (LOC582001), mRNA
          Length = 5778

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1494 tgtcaaagagggtcttctctt 1514
            |||||||||||||||||||||
Sbjct: 508  tgtcaaagagggtcttctctt 488
to top
>ref|XR_026160.1| PREDICTED: Strongylocentrotus purpuratus similar to LOC398512 protein
            (LOC582001), mRNA
          Length = 5778

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1494 tgtcaaagagggtcttctctt 1514
            |||||||||||||||||||||
Sbjct: 508  tgtcaaagagggtcttctctt 488
to top
>ref|NM_001067466.1| Oryza sativa (japonica cultivar-group) Os08g0132600 (Os08g0132600)
           mRNA, complete cds
          Length = 1897

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 468 caacctagccttctttgaccttgacaaacagtc 500
           |||| |||||||||||||||| |||||| ||||
Sbjct: 610 caacatagccttctttgacctggacaaagagtc 642
to top
>ref|NM_001067464.1| Oryza sativa (japonica cultivar-group) Os08g0132100 (Os08g0132100)
           mRNA, complete cds
          Length = 1797

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 468 caacctagccttctttgaccttgacaaacagtc 500
           |||| |||||||||||||||| |||||| ||||
Sbjct: 471 caacatagccttctttgacctggacaaagagtc 503
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1399    tactctgtatttttattttct 1419
               |||||||||||||||||||||
Sbjct: 3545304 tactctgtatttttattttct 3545284
to top
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1399    tactctgtatttttattttct 1419
               |||||||||||||||||||||
Sbjct: 3517805 tactctgtatttttattttct 3517785
to top
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1399    tactctgtatttttattttct 1419
               |||||||||||||||||||||
Sbjct: 3518390 tactctgtatttttattttct 3518370
to top
>gb|AC146127.4| Pan troglodytes BAC clone RP43-23F10 from 7, complete sequence
          Length = 190149

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1399   tactctgtatttttattttct 1419
              |||||||||||||||||||||
Sbjct: 129598 tactctgtatttttattttct 129578
to top
>gb|AC005682.2| Homo sapiens BAC clone RP11-84K19 from 7, complete sequence
          Length = 162139

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1399  tactctgtatttttattttct 1419
             |||||||||||||||||||||
Sbjct: 36617 tactctgtatttttattttct 36637
to top
>gb|AC146006.2| Pan troglodytes BAC clone RP43-165A19 from 7, complete sequence
          Length = 211780

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1399   tactctgtatttttattttct 1419
              |||||||||||||||||||||
Sbjct: 110468 tactctgtatttttattttct 110488
to top
>gb|AC146483.2| Pan troglodytes BAC clone RP43-30K12 from 7, complete sequence
          Length = 208066

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1399   tactctgtatttttattttct 1419
              |||||||||||||||||||||
Sbjct: 196448 tactctgtatttttattttct 196428
to top
>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    cgaaatttgtaatatctttaa 233
              |||||||||||||||||||||
Sbjct: 199942 cgaaatttgtaatatctttaa 199922
to top
>gb|AC091053.11| Homo sapiens chromosome 11, clone RP11-152H18, complete sequence
          Length = 160740

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 373    aaggctttgcaggctcttgac 393
              |||||||||||||||||||||
Sbjct: 120855 aaggctttgcaggctcttgac 120875
to top
>ref|NM_060112.3| Caenorhabditis elegans SKp1 Related (ubiquitin ligase complex
           component) family member (skr-1) (skr-1) mRNA, complete
           cds
          Length = 869

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 170 cctgccagactgttgctagtaagataaagggaaaatctcca 210
           ||||| ||||||||||||  | ||| |||||||||||||||
Sbjct: 417 cctgcaagactgttgctaacatgatcaagggaaaatctcca 457
to top
>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete
              sequence
          Length = 197576

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 579    catcaccttgaaggtaaagga 599
              |||||||||||||||||||||
Sbjct: 174318 catcaccttgaaggtaaagga 174338
to top
>emb|BX004801.15| Zebrafish DNA sequence from clone CH211-203K12 in linkage group 22,
              complete sequence
          Length = 139199

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1402   tctgtatttttattttctagc 1422
              |||||||||||||||||||||
Sbjct: 134253 tctgtatttttattttctagc 134273
to top
>gb|AF440505.1| Caenorhabditis elegans SKR-1 (skr-1) mRNA, partial cds
          Length = 788

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 170 cctgccagactgttgctagtaagataaagggaaaatctcca 210
           ||||| ||||||||||||  | ||| |||||||||||||||
Sbjct: 381 cctgcaagactgttgctaacatgatcaagggaaaatctcca 421
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 110      ccctcttcgatctcatcctgg 130
                |||||||||||||||||||||
Sbjct: 20944028 ccctcttcgatctcatcctgg 20944008
to top
>emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chromosome 13 Contains the 5'
              end of a novel gene, complete sequence
          Length = 165257

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 333    tgaaaccccatgtttaatgca 353
              |||||||||||||||||||||
Sbjct: 113007 tgaaaccccatgtttaatgca 113027
to top
>emb|AL096771.11|HSJ238D15 Human DNA sequence from clone RP1-238D15 on chromosome 6q12-14.3
             Contains 3' end of COL12A1 gene  for collagen, type XII,
             alpha 1, complete sequence
          Length = 112292

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 565   tcatgtgtaaatgtcatcaccttgaaggt 593
             |||||| ||||||||||||| ||||||||
Sbjct: 13188 tcatgtttaaatgtcatcacattgaaggt 13216
to top
>emb|AL353818.1|ATF14L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F14L2
          Length = 107027

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1172 atgtttttgataaaaacatca 1192
            |||||||||||||||||||||
Sbjct: 4362 atgtttttgataaaaacatca 4382
to top
>emb|AL138641.2|ATT22K7 Arabidopsis thaliana DNA chromosome 3, BAC clone T22K7
          Length = 82316

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1172  atgtttttgataaaaacatca 1192
             |||||||||||||||||||||
Sbjct: 78524 atgtttttgataaaaacatca 78544
to top
>emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression of tumorigenicity 5, L27a gene for
              ribosomal protein L27a and KIAA0298 gene
          Length = 275434

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 373    aaggctttgcaggctcttgac 393
              |||||||||||||||||||||
Sbjct: 183157 aaggctttgcaggctcttgac 183177
to top
>gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, complete sequence
          Length = 70000

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1453  ttttggaataaaggtgtttga 1473
             |||||||||||||||||||||
Sbjct: 37011 ttttggaataaaggtgtttga 36991
to top
>gb|AC018877.5| Homo sapiens BAC clone RP11-295K1 from 2, complete sequence
          Length = 83556

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1400  actctgtatttttattttcta 1420
             |||||||||||||||||||||
Sbjct: 16695 actctgtatttttattttcta 16715
to top
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1274F11
          Length = 171257

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   ccctcttcgatctcatcctgg 130
             |||||||||||||||||||||
Sbjct: 36117 ccctcttcgatctcatcctgg 36097
to top
>gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, complete sequence
          Length = 170211

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 373   aaggctttgcaggctcttgac 393
             |||||||||||||||||||||
Sbjct: 50847 aaggctttgcaggctcttgac 50867
to top
>dbj|AK105651.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-G02, full
           insert sequence
          Length = 1680

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 468 caacctagccttctttgaccttgacaaacagtc 500
           |||| |||||||||||||||| |||||| ||||
Sbjct: 557 caacatagccttctttgacctggacaaagagtc 589
to top
>dbj|AK068578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I03, full
           insert sequence
          Length = 1898

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 468 caacctagccttctttgaccttgacaaacagtc 500
           |||| |||||||||||||||| |||||| ||||
Sbjct: 611 caacatagccttctttgacctggacaaagagtc 643
to top
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1399    tactctgtatttttattttct 1419
               |||||||||||||||||||||
Sbjct: 3517678 tactctgtatttttattttct 3517658
to top
>gb|AC005394.1|AC005394 Homo sapiens chromosome 19, cosmid F8518, complete sequence
          Length = 44935

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1486  ttatgtcctgtcaaagagggt 1506
             |||||||||||||||||||||
Sbjct: 13477 ttatgtcctgtcaaagagggt 13457
to top
>emb|AL935196.10| Zebrafish DNA sequence from clone DKEYP-79F4 in linkage group 18,
             complete sequence
          Length = 105612

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1462  aaaggtgtttgatttactact 1482
             |||||||||||||||||||||
Sbjct: 93619 aaaggtgtttgatttactact 93639
to top
>emb|Z81072.1| Caenorhabditis elegans Cosmid F30A10, complete sequence
          Length = 37170

 Score = 42.1 bits (21), Expect = 6.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 170 cctgccagactgttgctagtaagataaagggaaaatctcca 210
           ||||| ||||||||||||  | ||| |||||||||||||||
Sbjct: 311 cctgcaagactgttgctaacatgatcaagggaaaatctcca 351


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 283,438,952
Number of extensions: 15722039
Number of successful extensions: 316097
Number of sequences better than 10.0: 53
Number of HSP's gapped: 316097
Number of HSP's successfully gapped: 53
Length of query: 1580
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1557
Effective length of database: 18,503,978,556
Effective search space: 28810694611692
Effective search space used: 28810694611692
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top