ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf4f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0317800:Os02g0317800 233 1e-61
2AK119798:Os10g0371000 37 0.020
3AK070069:Os10g0371000 37 0.020
4Os02g0113300:Os02g0113300 30 1.4
5AK064705:Os09g0508200 30 1.8
6AK063278:Os12g0472800 30 2.4
7AK068276:Os12g0568900 29 3.1
8AK072590:Os02g0113800 29 4.1
9Os12g0604200:Os12g0604200 28 5.3
10Os05g0101500:Os05g0101500 28 9.1
11AK121900:Os12g0556300 28 9.1

>Os02g0317800:Os02g0317800 |
          Length = 155
 Score =  233 bits (593), Expect = 1e-61
 Identities = 107/121 (88%), Positives = 113/121 (93%)
 Frame = +3

Query: 171 WTGEIRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEVINYQAFTNYKGVYSVAET 350
           WTGEIRG VVCDVC D+AIGPEDHVLEGAEVAVLCIT+SGEVINYQAFTN KGVY VAET
Sbjct: 35  WTGEIRGHVVCDVCGDAAIGPEDHVLEGAEVAVLCITRSGEVINYQAFTNSKGVYIVAET 94

Query: 351 MPESDRWDSCLARPISSFHQHCTRRGDAHSGVKFTYNKQSGSSHNVKTFLYKPANIPLYC 530
           MPESDRW+SCLARPISSFHQHCT+RGD HSGVKFTY+K SG+SH VKTFLYKPAN PLYC
Sbjct: 95  MPESDRWESCLARPISSFHQHCTKRGDTHSGVKFTYSKPSGNSHTVKTFLYKPANAPLYC 154

Query: 531 S 533
           S
Sbjct: 155 S 155



to top

>AK119798:Os10g0371000 |
          Length = 172

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 183 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKS--GEVINYQAFTNYKGVYSV 341
           +RGRV CD C      P    + GA+V V C +KS   +  +++  T++ G Y++
Sbjct: 40  VRGRVWCDTCLAGFETPASTYIAGAKVKVECRSKSTGAKTCSFEGQTDHTGTYNI 94



to top

>AK070069:Os10g0371000 |
          Length = 172

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 183 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKS--GEVINYQAFTNYKGVYSV 341
           +RGRV CD C      P    + GA+V V C +KS   +  +++  T++ G Y++
Sbjct: 40  VRGRVWCDTCLAGFETPASTYIAGAKVKVECRSKSTGAKTCSFEGQTDHTGTYNI 94



to top

>Os02g0113300:Os02g0113300 |
          Length = 484

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 378 CLARP--ISSFHQHCTRRGDAHSGVKFTYNKQSGSSHNVKTFLYKP 509
           CLARP  +S    HC R GD     +FT + Q   +H     L  P
Sbjct: 75  CLARPPRLSYLCVHCPRPGDGEGAYRFTVDPQVLGTHTDVALLRVP 120



to top

>AK064705:Os09g0508200 |
          Length = 262

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
 Frame = +3

Query: 189 GRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEV------INYQAFTNYKGVYSVAET 350
           G V CD C+++        L+GA V + C  K          +  +  T+  GVY +   
Sbjct: 40  GSVYCDACSNNTFSKHSFFLKGARVLIQCSFKVNSTMAEELSLEAERTTDQNGVYKL--D 97

Query: 351 MPESDRWDSCLARPISSFHQHCTRRGDAHSGVKFTYNKQSGSSHNV 488
           +P +  +D             C    D  S  + T  + S ++ NV
Sbjct: 98  VPAAGGFD-------------CREGHDLRSACRATLVRSSSAACNV 130



to top

>AK063278:Os12g0472800 |
          Length = 378

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = +3

Query: 183 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCI------TKSGEVINYQAFTNYKGVYSV 341
           + G V CD C+ S+     + L G +V + C+      +K    I  +  TN  G Y +
Sbjct: 55  VTGTVFCDACSSSSFSNHSYFLPGVKVRIDCMISVKSASKEEIKITAEKVTNTFGAYQL 113



to top

>AK068276:Os12g0568900 |
          Length = 230

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 171 WTGEIRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEVINY 305
           W+G +  R  CD  A    G E      + VA L +   G+V  Y
Sbjct: 73  WSGRVAARTGCDAAASPPAGCETGASPPSTVAQLSVHGGGDVATY 117



to top

>AK072590:Os02g0113800 |
          Length = 487

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 378 CLARP--ISSFHQHCTRRGDAHSGVKFTYNKQSGSSHNVKTFLYKP 509
           CLARP  +S    HC R GD     +FT + +   +H     L  P
Sbjct: 75  CLARPPRLSYLCVHCPRPGDGEGAYRFTVDPRVLGTHTDVALLRVP 120



to top

>Os12g0604200:Os12g0604200 |
          Length = 431

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 195 VVCDVCADSAIGPEDHVLEGAE 260
           VV DVC D A  P  H+LEG E
Sbjct: 363 VVVDVCRDVAAWPGRHLLEGGE 384



to top

>Os05g0101500:Os05g0101500 |
          Length = 97

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 241 WSSGPMAESAQTSQTTRPRISP 176
           WS GP AE A  +   RPR+ P
Sbjct: 3   WSLGPAAEGAVVAAAERPRLRP 24



to top

>AK121900:Os12g0556300 |
          Length = 597

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 405 HQHCTRRGDAHSGVKFTYNKQSGSSHNVKTFLYKPANI 518
           H H  R  D H G++   N Q     N+KT +Y   NI
Sbjct: 128 HLHSNRHADQHPGLEPNTNVQLRFLDNLKTPVYTEKNI 165


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,354,052
Number of extensions: 451210
Number of successful extensions: 1316
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1316
Number of HSP's successfully gapped: 11
Length of query: 256
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 158
Effective length of database: 11,475,837
Effective search space: 1813182246
Effective search space used: 1813182246
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top