ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4f08 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g21280:12002.t01918:unspliced-genomic expressed protein| Length = 3464 Score = 211 bits (456), Expect(2) = 3e-67 Identities = 84/95 (88%), Positives = 89/95 (93%) Frame = +3 / +2 Query: 252 GAEVAVLCITKSGEVINYQAFTNYKGVYSVAETMPESDRWDSCLARPISSFHQHCTRRGD 431 GAEVAVLCIT+SGEVINYQAFTN KGVY VAETMPESDRW+SCLARPISSFHQHCT+RGD Sbjct: 2918 GAEVAVLCITRSGEVINYQAFTNSKGVYIVAETMPESDRWESCLARPISSFHQHCTKRGD 3097 Query: 432 AHSGVKFTYNKQSGSSHNVKTFLYKPANIPLYCS* 536 HSGVKFTY+K SG+SH VKTFLYKPAN PLYCS* Sbjct: 3098 THSGVKFTYSKPSGNSHTVKTFLYKPANAPLYCS* 3202 Score = 68.9 bits (144), Expect(2) = 3e-67 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +3 / +2 Query: 171 WTGEIRGRVVCDVCADSAIGPEDHVLEG 254 WTGEIRG VVCDVC D+AIGPEDHVLEG Sbjct: 176 WTGEIRGHVVCDVCGDAAIGPEDHVLEG 259 Score = 175 bits (376), Expect(2) = 4e-53 Identities = 76/94 (80%), Positives = 83/94 (88%) Frame = -2 / -3 Query: 532 LQYRGMLAGL*RNVLTLCELPDCLLYVNLTPECASPLLVQCWWKLLMGLARHESHRSLSG 353 LQY+G LAGL*RNVLT+ E P+ LLYVNLTPEC SPLLVQCW KLLMGLA+H+S RSLSG Sbjct: 3198 LQYKGALAGL*RNVLTV*EFPEGLLYVNLTPECVSPLLVQCW*KLLMGLAKHDSQRSLSG 3019 Query: 352 IVSATL*TPL*FVNAW*LMTSPDFVMHRTATSAP 251 IVSAT+*TPL FV AW*L+TSPD VM RTATSAP Sbjct: 3018 IVSATM*TPLEFVKAW*LITSPDLVMQRTATSAP 2917 Score = 58.3 bits (121), Expect(2) = 4e-53 Identities = 24/27 (88%), Positives = 24/27 (88%) Frame = -2 / -3 Query: 253 PSRTWSSGPMAESAQTSQTTRPRISPV 173 PSRTWSSGPMA S QTSQTT PRISPV Sbjct: 258 PSRTWSSGPMAASPQTSQTTWPRISPV 178 Score = 147 bits (315), Expect = 1e-34 Identities = 61/100 (61%), Positives = 73/100 (73%) Frame = +2 / +1 Query: 263 CCSVHHEIW*GHQLPGVHKLQGCLQRCRDNA*ERPMGFVPGEAHQQLPPALHQEGRCTLW 442 C +HHEIW* +QLPG+HKLQGCL C D+A E P+G + G+AHQQL PALH EG TLW Sbjct: 2929 CRPLHHEIW*SYQLPGLHKLQGCLHCCGDDARE*PLGVMLGKAHQQLSPALH*EG*YTLW 3108 Query: 443 GQVHIQQTVGELAQRQDVPLQACQHSSIL*LKSIGWIHAR 562 GQVHIQQ +L+ RQDVPLQACQ +L*L ++ R Sbjct: 3109 GQVHIQQAFRKLSHRQDVPLQACQRPFVL*LNVFSFVCER 3228 Score = 138 bits (295), Expect = 6e-32 Identities = 62/88 (70%), Positives = 65/88 (73%) Frame = -3 / -1 Query: 537 FSYSIEECWQACRGTS*RCASSPTVCCM*T*PQSVHRPSWCNAGGSC*WASPGTNPIGRS 358 FSYS + WQACRGTS*RC S CCM*T*PQSV+ PS CNAG SC*WA P P G S Sbjct: 3203 FSYSTKGRWQACRGTS*RCESFLKACCM*T*PQSVYHPS*CNAGESC*WALPSMTPNGHS 3024 Query: 357 QALSLQRCRHPCSL*TPGS**PHQIS*C 274 A S Q+CRHP SL* PGS** HQIS*C Sbjct: 3023 LASSPQQCRHPWSL*RPGS**LHQIS*C 2940 Score = 133 bits (284), Expect = 2e-30 Identities = 62/95 (65%), Positives = 69/95 (72%) Frame = -1 / -2 Query: 533 ATV*RNVGRLVEERLDVVRAPRLFVVCELDPRVCIAPPGAMLVEAADGPRQARIPSVALR 354 ATV R VGRLVEERLD VR VCELDPRVCI P AMLV+AADGP QA +P+V L Sbjct: 3199 ATVQRGVGRLVEERLDGVRVS*RLAVCELDPRVCITPLSAMLVKAADGPCQA*LPTVTLW 3020 Query: 353 HCLCNAVDTLVVCERLVVDDLTRFRDAQNSNLSAF 249 H L N VDTL VCE LVVD+ TR RDA++ NL + Sbjct: 3019 HRLRNNVDTLGVCEGLVVDNFTRSRDAEDGNLGTY 2915 Score = 62.5 bits (130), Expect = 3e-09 Identities = 26/39 (66%), Positives = 30/39 (76%) Frame = +1 / +3 Query: 340 LQRQCLRATDGIRAWRGPSAASTSIAPGGAMHTLGSSSH 456 L+R+C R T G AW+GPSAA TSIA G +HTLGSSSH Sbjct: 3006 LRRRCQRVTVGSHAWQGPSAAFTSIALRGVIHTLGSSSH 3122
>LOC_Os07g43200:12007.t03967:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 6556 Score = 32.2 bits (64), Expect(2) = 0.50 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / +2 Query: 268 TATSAPSRTWSSGPMAESAQTSQTTRP 188 T T+APS +WSS P A S +T P Sbjct: 251 TRTTAPSSSWSSWPPATSKSMGSSTSP 331 Score = 25.8 bits (50), Expect(2) = 0.50 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -2 / +1 Query: 79 VAMNWFALSFSRERVELGDF 20 VA NW AL +R R G+F Sbjct: 3142 VATNWIALPSNRPRAREGEF 3201
>LOC_Os02g57480:12002.t05320:unspliced-genomic anthocyanin 5-aromatic acyltransferase, putative, expressed| Length = 2083 Score = 30.4 bits (60), Expect(2) = 0.54 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 / -2 Query: 271 RTATSAPSRTWSSGPMAESAQTSQTTRPR 185 RT +A SR W+S A + ++S TTR R Sbjct: 1620 RTRRTAASRRWTSAGAASATRSSGTTRRR 1534 Score = 22.1 bits (42), Expect(2) = 0.54 Identities = 7/25 (28%), Positives = 11/25 (44%) Frame = -3 / -2 Query: 426 PSWCNAGGSC*WASPGTNPIGRSQA 352 P W SC W +P G +++ Sbjct: 1701 PPWTPCRASCRWTGAPPSPAGPARS 1627
>LOC_Os11g47750:12011.t04269:unspliced-genomic hypothetical protein| Length = 1258 Score = 32.7 bits (65), Expect(2) = 0.91 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 / -1 Query: 420 WCNAGGSC*WASPGTNPIGRSQA 352 W GGSC WA PG P S A Sbjct: 496 WSRRGGSCGWAPPGACPSASSPA 428 Score = 22.1 bits (42), Expect(2) = 0.91 Identities = 7/23 (30%), Positives = 13/23 (56%) Frame = -3 / -2 Query: 744 LYIFIDYICMAQKHIIVIYNNYT 676 LY F + +CM + ++ + N T Sbjct: 633 LYFFSNLLCMPKAFFLIHHQNET 565
>LOC_Os04g01660:12004.t00064:unspliced-genomic glyoxylate reductase, putative, expressed| Length = 1099 Score = 34.1 bits (68), Expect = 1.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 / -2 Query: 474 SPTVCCM*T*PQSVHRPSWCNAGGSC*WASPGTNPIGRS 358 SPT+CC * + R SW GG+ A+P GRS Sbjct: 546 SPTLCCRGR*CRRASRRSWIRGGGNRRRAAPDRGRAGRS 430
>LOC_Os07g47290:12007.t04365:unspliced-genomic xylose isomerase, putative, expressed| Length = 4321 Score = 33.6 bits (67), Expect = 1.7 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / -3 Query: 444 PQSVHRPSWCNAGGSC*WASPGTNPIGRSQ 355 PQS HR + N+G +C A PG +P R + Sbjct: 3740 PQSRHRSHYQNSGSACEQAHPGNHPNSRKR 3651
>LOC_Os01g61550:12001.t05534:unspliced-genomic ammonium transporter 2, putative, expressed| Length = 1927 Score = 26.3 bits (51), Expect(2) = 1.8 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 / +1 Query: 295 TSPDFVMHRTATSAPSRTWSSGPMAESAQTS 203 TSP T TSAP R S GP + S+ ++ Sbjct: 934 TSPPRSPCSTPTSAPRRASSPGPASTSSSSA 1026 Score = 24.4 bits (47), Expect(2) = 1.8 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = -3 / +1 Query: 411 AGGSC*WASPGTNPIGRSQALSLQR 337 A G C WA PG+ R+ S R Sbjct: 874 AAGCCGWAGPGSTAARRTPPTSPPR 948
>LOC_Os06g19380:12006.t01759:unspliced-genomic expressed protein| Length = 3694 Score = 33.1 bits (66), Expect = 2.3 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 / -1 Query: 463 LLYVNLTPECASPLLVQCWWKLLMGLARHESH 368 +LYVN+ P+C S +++ C KL RH ++ Sbjct: 2974 ILYVNILPKCLSAIIISCNMKLQTDN*RHTAN 2879
>LOC_Os04g27100:12004.t02414:unspliced-genomic expressed protein| Length = 24613 Score = 33.1 bits (66), Expect = 2.3 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 / -1 Query: 393 WASPGTNPIGRSQALSLQR 337 WASP +P+G S+ALS QR Sbjct: 17422 WASPAEDPLGSSEALSRQR 17366
>LOC_Os10g38120:12010.t03067:unspliced-genomic cytochrome P450 86A1, putative, expressed| Length = 3730 Score = 27.2 bits (53), Expect(2) = 3.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 / -1 Query: 177 GEIRGRVVCDVCADSAIGPEDHVLEG 254 GE+RG + DV A+ A GP V+ G Sbjct: 2116 GELRGVPLEDVAAEVAEGPRGEVVAG 2039 Score = 22.6 bits (43), Expect(2) = 3.0 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 / -3 Query: 376 RAWRGPSAASTS 411 R+WR SA+STS Sbjct: 2048 RSWRSSSASSTS 2013
>LOC_Os07g07430:12007.t00621:unspliced-genomic CCR4-NOT transcription complex subunit 7, putative| Length = 1110 Score = 32.7 bits (65), Expect = 3.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / -3 Query: 268 TATSAPSRTWSSGPMAESAQTSQTTRP 188 TAT AP RTW S ++ T+ TT P Sbjct: 151 TATPAPPRTWPSPAVSRRTATTATTSP 71
>LOC_Os06g40550:12006.t03751:unspliced-genomic ABC transporter-like protein, putative, expressed| Length = 6219 Score = 32.7 bits (65), Expect = 3.2 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -3 / +3 Query: 480 ASSPTVCCM*T*PQSVHRPSWCNAGGSC*WASPGTNPIGR 361 +SS CC T P P + SC ASPG P GR Sbjct: 3309 SSSTRRCCSSTSPPRASTPRRRRSSSSCSAASPGRRPAGR 3428
>LOC_Os04g14790:12004.t01297:unspliced-genomic glycerol-3-phosphate dehydrogenase, mitochondrial precursor,| putative, expressed Length = 7033 Score = 32.7 bits (65), Expect = 3.2 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +1 / -1 Query: 16 RKSHQALPSPSKRKEQTNSWRRPR 87 +++ A P P +R+ +T WRRPR Sbjct: 115 KRTRTARPRPRRRRRRTRRWRRPR 44
>LOC_Os02g53820:12002.t04961:unspliced-genomic endoglucanase precursor, putative, expressed| Length = 2550 Score = 32.7 bits (65), Expect = 3.2 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 / +3 Query: 268 TATSAPSRTWSSGPMAESAQTSQTTRP 188 T TS+P+R+W++ A ++ TS TRP Sbjct: 1683 TPTSSPARSWAAPTAATTSPTSVATRP 1763
>LOC_Os12g31610:12012.t02865:unspliced-genomic lectin-like protein kinase, putative| Length = 3332 Score = 29.5 bits (58), Expect(2) = 3.9 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 / +1 Query: 379 AWRGPSAASTSIAPGGAMHTLGS 447 +WR PSA S+ +APG + +GS Sbjct: 3250 SWRRPSARSSLLAPGAIVAFVGS 3318 Score = 24.4 bits (47), Expect(2) = 3.9 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 / +3 Query: 15 PQKSPSSTLSLEKERANQF 71 P KSP ST L + AN+F Sbjct: 1989 PIKSPPSTTILSTDNANRF 2045
>LOC_Os01g61510:12001.t05530:unspliced-genomic ammonium transporter 2, putative, expressed| Length = 2513 Score = 25.4 bits (49), Expect(2) = 4.2 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 / +3 Query: 295 TSPDFVMHRTATSAPSRTWSSGPMAESAQTS 203 TSP T TSAP R S GP + S+ ++ Sbjct: 1332 TSPRPSPCSTPTSAPRRASSPGPASTSSSSA 1424 Score = 24.0 bits (46), Expect(2) = 4.2 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -3 / +3 Query: 411 AGGSC*WASPGTNPIGRSQALS 346 A G C WA PG+ R+ S Sbjct: 1272 AAGCCGWAGPGSTAARRTPQTS 1337
>LOC_Os12g38120:12012.t03493:unspliced-genomic thaumatin-like protein precursor, putative, expressed| Length = 1070 Score = 32.2 bits (64), Expect = 4.4 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = +3 / +3 Query: 171 WTGEIRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEVINY 305 W+G + R CD A G E + VA L + G+V Y Sbjct: 255 WSGRVAARTGCDAAASPPAGCETGASPPSTVAQLSVHGGGDVATY 389
>LOC_Os12g04000:12012.t04111:unspliced-genomic auxin efflux carrier component 1b, putative, expressed| Length = 2532 Score = 32.2 bits (64), Expect = 4.4 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -1 / -2 Query: 440 RVCIAPPGAMLVEAADGPRQARIPSVALRHCLC 342 R C P + AA GPR R PS R C C Sbjct: 455 RTCAGPSSSPPPAAASGPRHRRRPSPRRRACRC 357 Score = 31.3 bits (62), Expect = 8.2 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 / +1 Query: 343 QRQCLRATDGIRAWRGPSAASTSIAPGGAMH 435 QRQ R +G R WRGP AA+ G H Sbjct: 358 QRQARRRGEGRRRWRGPLAAAGGGEEEGPAH 450
>LOC_Os11g23140:12011.t01983:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6681 Score = 32.2 bits (64), Expect = 4.4 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -3 / -3 Query: 393 WASPGTNPIGRSQALSLQRCR 331 WASP +P+G S+ALS +R R Sbjct: 5902 WASPAEDPLGSSEALSRRRKR 5840
>LOC_Os06g12500:12006.t01126:unspliced-genomic plant integral membrane protein TIGR01569 containing protein,| expressed Length = 811 Score = 32.2 bits (64), Expect = 4.4 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 / +2 Query: 369 WDSCLARPISSFHQHC 416 W + L+ PISSFH HC Sbjct: 323 WQTLLSLPISSFHSHC 370
>LOC_Os03g63580:12003.t05575:unspliced-genomic hydrolase, acting on ester bonds, putative, expressed| Length = 1620 Score = 32.2 bits (64), Expect = 4.4 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -2 / +2 Query: 259 SAPSRTWSSGPMAESAQTSQTTRPRIS 179 SAPS T S+ P + SA T+ T RPR S Sbjct: 590 SAPSLTPSTTPASPSASTTSTRRPRSS 670
>LOC_Os01g52010:12001.t04629:unspliced-genomic alliin lyase precursor, putative, expressed| Length = 4441 Score = 26.3 bits (51), Expect(2) = 5.4 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 / +2 Query: 259 SAPSRTWSSGPMAESAQTSQTTR 191 S+ + TWSSGP S+ T TR Sbjct: 2849 SSTTSTWSSGPAPCSSSTRWCTR 2917 Score = 22.6 bits (43), Expect(2) = 5.4 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = -3 / +2 Query: 420 WCNAGGSC*WASPGTNPIGRSQALSLQRC 334 WC+ GG+ * SP S +++ C Sbjct: 2738 WCSPGGTA*ATSPPAAASIPSSSIATSGC 2824
>LOC_Os09g27890:12009.t02467:unspliced-genomic erwinia induced protein 1, putative, expressed| Length = 3638 Score = 26.3 bits (51), Expect(2) = 5.5 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -2 / +1 Query: 253 PSRTWSSGPMAESAQTSQTTR 191 PSR WS P+ AQ TR Sbjct: 250 PSRRWSPAPLPPPAQRCSPTR 312 Score = 22.6 bits (43), Expect(2) = 5.5 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -3 / +1 Query: 363 RSQALSLQRCRHPCS 319 RS+ S C HPCS Sbjct: 157 RSRPPSPSSCHHPCS 201
>LOC_Os08g20610:12008.t01874:unspliced-genomic membrane-associated salt-inducible protein, putative| Length = 2208 Score = 26.7 bits (52), Expect(2) = 5.7 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -2 / +2 Query: 250 SRTWSSGPMAESAQTSQTTRPRISP 176 SRTWS P A TS T P +P Sbjct: 170 SRTWSPSPPACPPATSARTPPSSTP 244 Score = 22.1 bits (42), Expect(2) = 5.7 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -2 / +1 Query: 418 VQCWWKLLMGLARHESHRSLSGIVS 344 ++C LLM LARH + + S Sbjct: 121 LRCLNTLLMALARHRMFPDMESLAS 195
>LOC_Os09g12380:12009.t01028:unspliced-genomic no apical meristem protein, expressed| Length = 1638 Score = 26.7 bits (52), Expect(2) = 5.8 Identities = 11/29 (37%), Positives = 13/29 (44%) Frame = -2 / +2 Query: 274 HRTATSAPSRTWSSGPMAESAQTSQTTRP 188 H+TA A R W P +A T RP Sbjct: 1115 HKTAAPARRRRWWPAPAPSAAARRATCRP 1201 Score = 22.1 bits (42), Expect(2) = 5.8 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 / +2 Query: 98 RERTRGRRHELVCS 57 R R RGRR + +CS Sbjct: 1319 RRRRRGRRRKPMCS 1360
>LOC_Os12g01916:12012.t04134:unspliced-genomic bcpLH protein, putative, expressed| Length = 4479 Score = 31.8 bits (63), Expect = 6.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 / +2 Query: 3 SSILPQKSPSSTLSLEKERANQFMATAPCSLPHR 104 S++L +PSS LS +R++ + CSLPH+ Sbjct: 1514 SALLVPSTPSSLLSALPQRSSALPLKSSCSLPHQ 1615
>LOC_Os11g01869:12011.t00084:unspliced-genomic RBP2 protein, putative, expressed| Length = 4562 Score = 31.8 bits (63), Expect = 6.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 / +1 Query: 3 SSILPQKSPSSTLSLEKERANQFMATAPCSLPHR 104 S++L +PSS LS +R++ + CSLPH+ Sbjct: 1519 SALLVPSTPSSLLSALPQRSSALPLKSSCSLPHQ 1620
>LOC_Os10g26380:12010.t02050:unspliced-genomic hypothetical protein| Length = 658 Score = 31.8 bits (63), Expect = 6.0 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +1 / -1 Query: 358 RATDGIRAWRGPSAASTSIAPGGAMHTLGSSSH 456 R DG R WR PSA+ TS A ++ +SSH Sbjct: 115 RRRDGGRWWRWPSASPTSPATASSLALPPASSH 17
>LOC_Os08g41540:12008.t03883:unspliced-genomic ubiquitin carboxyl-terminal hydrolase family protein| Length = 3656 Score = 31.8 bits (63), Expect = 6.0 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 / -1 Query: 285 SGEVINYQAFTNYKGVYSVAETMPESDRWDSCLARPISSFHQHC 416 SG + FT+ K +S T PE + LAR SS +HC Sbjct: 1085 SGRCALFTLFTS*KSSFSALPTNPEGASDANILARSFSSTKRHC 954
>LOC_Os06g11180:12006.t00995:unspliced-genomic acyl-peptide hydrolase-like, putative, expressed| Length = 7434 Score = 31.8 bits (63), Expect = 6.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 / +2 Query: 491 LDVVRAPRLFVVCELDPRVCIAPPGAMLVEAADGPR 384 L +++ P FV +L RVC+A MLVE+ P+ Sbjct: 2627 LFMIKHP*FFVCRDLTKRVCVAGSNPMLVESPTEPK 2734
>LOC_Os06g03050:12006.t00198:unspliced-genomic expressed protein| Length = 2447 Score = 31.8 bits (63), Expect = 6.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 / +1 Query: 265 ATSAPSRTWSSGPMAESAQTSQTTRPRISP 176 +T+ PS W S S+ T+ +TRP SP Sbjct: 1108 STTTPSSPWCSRAPTSSSSTTSSTRPSCSP 1197
>LOC_Os04g47520:12004.t04278:unspliced-genomic auxin-independent growth promoter, putative, expressed| Length = 4142 Score = 31.8 bits (63), Expect = 6.0 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 / -3 Query: 173 PSLXXXXXGQQESEDGQMEEEQTPVRERTRGRRH 72 P+ +QE+ + +E+Q+ RER RGRRH Sbjct: 372 PAAAAAERRRQEAVESDDDEQQSRRRERRRGRRH 271
>LOC_Os02g34310:12002.t03070:unspliced-genomic hypothetical protein| Length = 1413 Score = 31.8 bits (63), Expect = 6.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 / +3 Query: 271 RTATSAPSRTWSSGPMAESAQTSQTTRPR 185 RTA ++PS TWS G + + T+ T PR Sbjct: 777 RTAAASPSGTWSGGAGSWAPGTTTTCAPR 863
>LOC_Os04g02510:12004.t00144:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 3785 Score = 25.4 bits (49), Expect(2) = 7.3 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -1 / +2 Query: 407 VEAADGPRQARIPSVALRH 351 V AA PR+ R+ VALRH Sbjct: 491 VVAAPQPRRRRVRRVALRH 547 Score = 23.1 bits (44), Expect(2) = 7.3 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -2 / +1 Query: 259 SAPSRTWSSGP 227 SAPS TWS+ P Sbjct: 538 SAPSATWSTPP 570
>LOC_Os04g47220:12004.t04249:unspliced-genomic aquaporin PIP1.2, putative, expressed| Length = 1967 Score = 30.4 bits (60), Expect(2) = 8.0 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -3 / -1 Query: 768 FFFFYLNSLYIFIDYIC 718 FFF+Y YIF++Y+C Sbjct: 1151 FFFYYNQLSYIFLEYLC 1101 Score = 21.7 bits (41), Expect(2) = 8.0 Identities = 9/29 (31%), Positives = 13/29 (44%) Frame = -1 / -3 Query: 431 IAPPGAMLVEAADGPRQARIPSVALRHCL 345 +APP + P P +A RHC+ Sbjct: 570 LAPPPVVSYRPFWKPLTTPAPQMAPRHCI 484
>LOC_Os12g41140:12012.t03791:unspliced-genomic expressed protein| Length = 6247 Score = 31.3 bits (62), Expect = 8.2 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 / +3 Query: 195 VVCDVCADSAIGPEDHVLEGAE 260 VV DVC D A P H+LEG E Sbjct: 5496 VVVDVCRDVAAWPGRHLLEGGE 5561
>LOC_Os12g09164:12012.t00796:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3249 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 / -2 Query: 393 WASPGTNPIGRSQALSLQR 337 WASP +P+G S+ALS +R Sbjct: 1841 WASPAEDPLGSSEALSRRR 1785
>LOC_Os11g17410:12011.t01519:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 1834 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 / +1 Query: 441 QSVHRPSWCNAGGSC*WASPGTNPIGRS 358 Q+VH P W +G SC +S G++ + S Sbjct: 928 QAVHHPPWATSGVSCTISSSGSSTVSTS 1011
>LOC_Os08g40250:12008.t03756:unspliced-genomic expressed protein| Length = 6523 Score = 31.3 bits (62), Expect = 8.2 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +2 / -1 Query: 416 HQEGRCTLWGQVHIQQTVGELAQRQDVPLQACQHSSIL*LKSIGWIH 556 HQ+G C + H+ Q LA+ + L+ Q S L* + W+H Sbjct: 2350 HQQGNCHHLAKGHLLQLEHHLAKGHLLQLEQQQQQSFL*NHYLLWVH 2210
>LOC_Os08g32950:12008.t03038:unspliced-genomic hypothetical protein| Length = 2029 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 / -1 Query: 393 WASPGTNPIGRSQALSLQR 337 WASP +P+G S+ALS +R Sbjct: 1555 WASPAEDPLGSSEALSRRR 1499
>LOC_Os06g10450:12006.t00923:unspliced-genomic expressed protein| Length = 2048 Score = 31.3 bits (62), Expect = 8.2 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 / +1 Query: 271 RTATSAPSRTWSSGPMAESAQTSQTTRP 188 RTA ++PS TWS G + + T+ T+ P Sbjct: 913 RTAAASPSGTWSGGAGSWAPSTTTTSAP 996
>LOC_Os04g54050:12004.t04878:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4481 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 / -2 Query: 393 WASPGTNPIGRSQALSLQR 337 WASP +P+G S+ALS +R Sbjct: 3100 WASPAEDPLGSSEALSRRR 3044
>LOC_Os04g33090:12004.t02985:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2132 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 / -3 Query: 393 WASPGTNPIGRSQALSLQR 337 WASP +P+G S+ALS +R Sbjct: 1524 WASPAEDPLGSSEALSRRR 1468
>LOC_Os04g23030:12004.t02031:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3525 Score = 31.3 bits (62), Expect = 8.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 / +1 Query: 393 WASPGTNPIGRSQALSLQR 337 WASP +P+G S+ALS +R Sbjct: 3457 WASPAEDPLGSSEALSRRR 3513
>LOC_Os03g39720:12003.t03408:unspliced-genomic hypothetical protein| Length = 1292 Score = 31.3 bits (62), Expect = 8.2 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 / +1 Query: 271 RTATSAPSRTWSSGPMAESAQTSQTTRP 188 RTA ++PS TWS G + + T+ T+ P Sbjct: 931 RTAAASPSGTWSGGAGSWAPSTTTTSAP 1014
>LOC_Os02g05880:12002.t00486:unspliced-genomic RNA polymerase Rpb1, domain 2 family protein, expressed| Length = 14753 Score = 31.3 bits (62), Expect = 8.2 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = +3 / +3 Query: 6 SILPQKSPSSTLSLEKERANQFMATAPCSLP 98 S+L K SS L KE ANQ CSLP Sbjct: 5481 SLLALKHMSSRTMLSKEAANQLAMLVTCSLP 5573
>LOC_Os01g62480:12001.t05623:unspliced-genomic L-ascorbate oxidase precursor, putative, expressed| Length = 2987 Score = 31.3 bits (62), Expect = 8.2 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / -2 Query: 346 RQCLRATDGIRAWRGPSAASTSIAPGGA 429 R+C RAT G RA R P + + S AP G+ Sbjct: 697 RRCGRATTGCRAARPP*SCTRSSAPSGS 614 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 276,228,265 Number of extensions: 4321723 Number of successful extensions: 21557 Number of sequences better than 10.0: 47 Length of query: 256 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 207 Effective length of database: 52,856,264 Effective search space: 10941246648 Effective search space used: 10941246648 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
