ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf4f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P19963:ALL1_OLEEU Major pollen allergen - Olea europaea (Common ... 36 0.14
2Q8LGR0:CHE1_CHEAL Pollen allergen Che a 1 precursor - Chenopodiu... 34 0.71
3O82015:LIGV1_LIGVU Major pollen allergen Lig v 1 - Ligustrum vul... 32 2.7
4Q9BYQ4:KRA92_HUMAN Keratin-associated protein 9-2 - Homo sapiens... 31 6.0
5Q2T9P9:CL012_BOVIN Uncharacterized protein C12orf12 homolog - Bo... 30 7.9

>P19963:ALL1_OLEEU Major pollen allergen - Olea europaea (Common olive)|
          Length = 145
 Score = 36.2 bits (82), Expect = 0.14
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
 Frame = +3

Query: 183 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEVINYQ--AFTNYKGVYSVAETMP 356
           I+G+V CD C    I      + GA + + C  K    + +    +T  +G+YS+   + 
Sbjct: 13  IQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSM--LVE 70

Query: 357 ESDRWDSCLARPISSFHQHCTR---RGDAHSGVKFTYNKQSGSSHNV 488
              + + C    ISS  + C      G A   +KF  N  +G++  V
Sbjct: 71  RDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTV 117



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>Q8LGR0:CHE1_CHEAL Pollen allergen Che a 1 precursor - Chenopodium album|
           (Lamb's-quarters)
          Length = 168

 Score = 33.9 bits (76), Expect = 0.71
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = +3

Query: 180 EIRGRVVCDVCADSAIGPEDHVLEGAEVAVLC--ITKSGEVINYQAFTNYKGVYSVAETM 353
           +++G V CD C    +     ++EGA V + C  IT   +    +A T+  G YS+    
Sbjct: 31  KVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNG 90

Query: 354 PESDRWDSCLARPISSFHQHCTRRGD---AHSGVKFTYNKQSGSSHNVKT 494
              D  D C    + S +  C+       A    K +    +G + ++++
Sbjct: 91  DFED--DICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRS 138



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>O82015:LIGV1_LIGVU Major pollen allergen Lig v 1 - Ligustrum vulgare (Common privet)|
          Length = 145

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
 Frame = +3

Query: 183 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGE----VINYQAFTNYKGVYSVAET 350
           I+G+V CD C    I      + GA V + C  K GE          +T  +G+Y++   
Sbjct: 13  IQGQVYCDTCRARFITELSEFIPGAGVRLQC--KDGENGKVTFTEVGYTKAEGLYNM--L 68

Query: 351 MPESDRWDSCLARPISSFHQHCTR---RGDAHSGVKFTYNKQSGSSHNV 488
           +    + + C    ISS  + C      G     +KF  N  +G++  +
Sbjct: 69  IERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTI 117



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>Q9BYQ4:KRA92_HUMAN Keratin-associated protein 9-2 - Homo sapiens (Human)|
          Length = 174

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
 Frame = -3

Query: 516 CWQACRGTS*RCASSPTVCCM*T*PQSVHRPSWCN--------AGGSC*WASPGTNPIGR 361
           C   CR TS +     T CC  T   S  +PS C+         G SC   +   +  G+
Sbjct: 48  CQPCCRPTSCQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQ 107

Query: 360 SQALSLQRCRHPC 322
           S + +   CR  C
Sbjct: 108 SSSCAPVYCRRTC 120



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>Q2T9P9:CL012_BOVIN Uncharacterized protein C12orf12 homolog - Bos taurus (Bovine)|
          Length = 415

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 265 ATSAPSRTWSSGPMAESAQTSQTTRPRISP 176
           A+SAP RTWS GP           RPR  P
Sbjct: 19  ASSAPLRTWSFGPRRRRGAPVYRRRPRYGP 48


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 124,109,178
Number of extensions: 2661926
Number of successful extensions: 7085
Number of sequences better than 10.0: 5
Number of HSP's gapped: 7079
Number of HSP's successfully gapped: 5
Length of query: 256
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 145
Effective length of database: 70,239,694
Effective search space: 10184755630
Effective search space used: 10184755630
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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