ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf4e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q4UMX8:SYV_RICFE Valyl-tRNA synthetase - Rickettsia felis (Ricke... 33 1.6
2Q1RJ74:SYV_RICBR Valyl-tRNA synthetase - Rickettsia bellii (stra... 33 2.1
3O43491:E41L2_HUMAN Band 4.1-like protein 2 - Homo sapiens (Human) 32 2.7
4Q68W50:SYV_RICTY Valyl-tRNA synthetase - Rickettsia typhi 31 6.1
5Q92GR9:SYV_RICCN Valyl-tRNA synthetase - Rickettsia conorii 31 7.9
6Q6V4S5:SDK2_MOUSE Protein sidekick-2 precursor - Mus musculus (M... 31 7.9

>Q4UMX8:SYV_RICFE Valyl-tRNA synthetase - Rickettsia felis (Rickettsia azadi)|
          Length = 859
 Score = 33.1 bits (74), Expect = 1.6
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +2

Query: 233 EIEPDLQEDPIDKWRTNGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQG 412
           E+EPDL  D +D W T+ VSP+   +G+ D      E  +K          +     PQ 
Sbjct: 495 EVEPDL--DVMDTWATSSVSPQLSTHGISDDFTVNKERHDK---------LFPMELRPQA 543

Query: 413 FQALISWSF 439
            + + +W+F
Sbjct: 544 HEIIRTWAF 552



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>Q1RJ74:SYV_RICBR Valyl-tRNA synthetase - Rickettsia bellii (strain RML369-C)|
          Length = 812

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +2

Query: 233 EIEPDLQEDPIDKWRTNGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQG 412
           E+EPDL  D +D W T+ VSP+   +G+ D     ++ +  K F  D+         PQ 
Sbjct: 448 EVEPDL--DVMDTWATSSVSPQLSTWGISD-EFAVNKDRHGKLFPMDLR--------PQA 496

Query: 413 FQALISWSF 439
            + + +W+F
Sbjct: 497 HEIIRTWAF 505



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>O43491:E41L2_HUMAN Band 4.1-like protein 2 - Homo sapiens (Human)|
          Length = 1005

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
 Frame = +2

Query: 188 SGRAVAVRAGPGPLTEIEPDLQEDPI---DKWRTNGVSPEDFVYGVYDGHHTYDEG--QE 352
           +G+ ++  +GPG + ++EP  Q+D      +  ++    E+   G Y  HH   EG  +E
Sbjct: 710 NGKEISPGSGPGEIRKVEPVTQKDSTSLSSESSSSSSESEEEDVGEYRPHHRVTEGTIRE 769

Query: 353 KKGFWEDVSE 382
           ++ + E+V E
Sbjct: 770 EQEYEEEVEE 779



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>Q68W50:SYV_RICTY Valyl-tRNA synthetase - Rickettsia typhi|
          Length = 814

 Score = 31.2 bits (69), Expect = 6.1
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +2

Query: 233 EIEPDLQEDPIDKWRTNGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQG 412
           E++PDL  D +D W T+ VSP+   YG+ +     ++ +  K F  D+         PQ 
Sbjct: 448 EVDPDL--DVMDTWATSSVSPQLSTYGISE-DFAINKVRHDKLFPMDLR--------PQA 496

Query: 413 FQALISWSF 439
            + + +W+F
Sbjct: 497 HEIIRTWAF 505



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>Q92GR9:SYV_RICCN Valyl-tRNA synthetase - Rickettsia conorii|
          Length = 812

 Score = 30.8 bits (68), Expect = 7.9
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +2

Query: 233 EIEPDLQEDPIDKWRTNGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQG 412
           E+EPD   D +D W T+ VSP+   +G+ D     ++ +  K F  D+         PQ 
Sbjct: 448 EVEPDY--DVMDTWATSSVSPQLSTHGISD-DFAVNKDRHDKLFPMDLR--------PQA 496

Query: 413 FQALISWSF 439
            + + +W+F
Sbjct: 497 HEIIRTWAF 505



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>Q6V4S5:SDK2_MOUSE Protein sidekick-2 precursor - Mus musculus (Mouse)|
          Length = 2176

 Score = 30.8 bits (68), Expect = 7.9
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
 Frame = +2

Query: 260  PIDKWRTNGVSPED----FVYGVYDGH-----HTYDEGQEKKGFWEDVSEWYQEAEPPQG 412
            P+ +   NG +PE       YG  DGH     HT  +  E++   ED+ EW +     Q 
Sbjct: 1123 PLPEMEYNG-NPESVGYKIKYGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQA 1181

Query: 413  FQALISWSFPPAVI 454
            F A+ S  +  AV+
Sbjct: 1182 FNAIGSGPWSQAVV 1195


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 148,746,245
Number of extensions: 3363882
Number of successful extensions: 9076
Number of sequences better than 10.0: 6
Number of HSP's gapped: 9069
Number of HSP's successfully gapped: 6
Length of query: 305
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 192
Effective length of database: 69,691,104
Effective search space: 13380691968
Effective search space used: 13380691968
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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