ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf6o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073351:Os04g0617800 430 e-120
2AK108242: 33 0.40
3Os12g0156000:Os12g0156000 32 0.88
4AK105654:Os01g0830700 32 0.88
5AK101671:Os01g0830700 32 0.88
6AK111006:Os04g0447300 32 1.1
7AK108128:Os01g0725900 32 1.5
8AK101009:Os02g0214400 32 1.5
9Os02g0488600:Os02g0488600 31 2.0
10Os07g0525000:Os07g0525000 31 2.0
11AK110223:Os01g0329300 31 2.6
12AK072583:Os06g0583900 31 2.6
13Os04g0609900:Os04g0609900 31 2.6
14AK109265: 31 2.6
15Os07g0521800:Os07g0521800 28 3.1
16AK099798:Os12g0515400 30 3.3
17AK106923: 30 3.4
18Os08g0400200:Os08g0400200 30 4.4
19Os03g0169500:Os03g0169500 30 5.7
20Os09g0425300:Os09g0425300 30 5.7
21AK101566:Os11g0208100 29 7.4
22AK111978: 29 7.5
23AK110018: 29 7.5
24AK107713:Os09g0279800 29 7.5
25AK105371:Os07g0417200 29 7.5
26Os12g0582000:Os12g0582000 29 9.7
27AK110090: 29 9.7
28AK119848: 29 9.7
29AK110176: 29 9.7
30AK071236:Os04g0673800 29 9.7

>AK073351:Os04g0617800 |
          Length = 269
 Score =  430 bits (1106), Expect = e-120
 Identities = 225/269 (83%), Positives = 234/269 (86%), Gaps = 3/269 (1%)
 Frame = +3

Query: 258  MTTAPSVSLSLSRPHPECAPLIPRSSVRTGAGVAFPARPYGSLLRLRSRVMS---ASGVG 428
            MTTA  VS SLSR  P  A  +  SS  + AGVA PARP+G  L LR   M+   A+G G
Sbjct: 1    MTTARFVSPSLSRVSPSPAGRVSGSSWLSRAGVALPARPHGLSLHLRPPAMASAAAAGNG 60

Query: 429  SPVAPEDPAASCRLGEVKRVTKETNVHVKVNLDGTGVADCSTGIPFLDHMLDQLASHGLF 608
            SP APED  A  R+GEVKRVTKETNVHVK+NLDGTGVADCSTGIPFLDHMLDQLASHGLF
Sbjct: 61   SPSAPEDSTALSRIGEVKRVTKETNVHVKINLDGTGVADCSTGIPFLDHMLDQLASHGLF 120

Query: 609  DIHVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDL 788
            D+ VKA GDTHIDDHHSNEDIALAIGTALL+ALGDRKGINRFGHFTAPLDEAAVEVILDL
Sbjct: 121  DVCVKAKGDTHIDDHHSNEDIALAIGTALLEALGDRKGINRFGHFTAPLDEAAVEVILDL 180

Query: 789  SGRPHLSCGLSIPTARVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGNNSHHIIEACFKA 968
            SGRPHLSCGLSIPT RVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAG NSHHIIEA FKA
Sbjct: 181  SGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKA 240

Query: 969  FARALRQATEYDLRRRGTVPSSKGVLSRS 1055
            FARALRQATEYDLRRRGTVPSSKGVLSRS
Sbjct: 241  FARALRQATEYDLRRRGTVPSSKGVLSRS 269



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>AK108242: |
          Length = 537

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
 Frame = -1

Query: 538 TPVPSRLTLTCTFVSFVTLLTSPNLHEAAGSSGATGEPTPLADMTRDLRRSNDP------ 377
           +P PSR  L  T         +P   EAAG S A G+   LAD ++D   +  P      
Sbjct: 116 SPSPSRAPLPST--------AAPT--EAAGQS-ADGKSAHLADPSQDTEAAAGPSRSRAS 164

Query: 376 ---YGRAGKATPA----PVL-----TEDLGIRGAHSGCGRDRERE 278
              YG    ATP     P+L      E+  +R  HSG GR+R  E
Sbjct: 165 SLGYGGLAPATPGGETDPLLLRSRVVEESEVRRRHSGKGRNRRNE 209



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>Os12g0156000:Os12g0156000 |
          Length = 165

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 29/89 (32%), Positives = 39/89 (43%)
 Frame = +3

Query: 270 PSVSLSLSRPHPECAPLIPRSSVRTGAGVAFPARPYGSLLRLRSRVMSASGVGSPVAPED 449
           P+   S SRP PE APL P +     A V  P+    +  R R R  +A    S V  ED
Sbjct: 59  PAAVRSASRPVPETAPLTPTAGAARSAPVRIPSEAAAAAGR-RGRWAAAQ---SSVGGED 114

Query: 450 PAASCRLGEVKRVTKETNVHVKVNLDGTG 536
             A+  +   + V +    H  V L+G G
Sbjct: 115 GDAAMVVPPHEVVARRAAAHSSV-LEGAG 142



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>AK105654:Os01g0830700 |
          Length = 522

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +2

Query: 137 RAYSIRPRAQAQCSFARTAQPLAPTRA*ACWISHPPRALADDHRAVRLPLPIPTTPRVRP 316
           R+ ++ P A+A  + AR  +P+         ++ P R ++   +A  LPL +   P++  
Sbjct: 59  RSLTLDPIARAGTTPARIVEPVVTEERHVARVNPPRREVSSAEKAAALPLDVDERPKLAT 118

Query: 317 PDP 325
           P P
Sbjct: 119 PTP 121



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>AK101671:Os01g0830700 |
          Length = 522

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +2

Query: 137 RAYSIRPRAQAQCSFARTAQPLAPTRA*ACWISHPPRALADDHRAVRLPLPIPTTPRVRP 316
           R+ ++ P A+A  + AR  +P+         ++ P R ++   +A  LPL +   P++  
Sbjct: 59  RSLTLDPIARAGTTPARIVEPVVTEERHVARVNPPRREVSSAEKAAALPLDVDERPKLAT 118

Query: 317 PDP 325
           P P
Sbjct: 119 PTP 121



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>AK111006:Os04g0447300 |
          Length = 108

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +3

Query: 216 PRPAGFRT-LRGL-SLMTTAPSVSLSLSRPHPECAP 317
           PRP  +R  LR L S  TT+PS +L+ S PHP  AP
Sbjct: 13  PRPRNYRCGLRRLASRWTTSPSTALAGSGPHPAAAP 48



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>AK108128:Os01g0725900 |
          Length = 169

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 228 GFRTLRGLSLMTTAPSVSLSLSRPHPECAPLIPRSSVRTGAGVAF-PARPYGSLLRLRSR 404
           G    RG  L+ T   V+   S+   +C   +PRS  R   GVA  P R  GS L+ R  
Sbjct: 87  GATDARGYFLIQTGTQVAAFTSK---DCRVYVPRSPSRAACGVALQPGRKTGSPLKFRRF 143

Query: 405 VMSASGV 425
           V    G+
Sbjct: 144 VALPDGL 150



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>AK101009:Os02g0214400 |
          Length = 446

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +3

Query: 498 TNVHVKVNLDGTGVADCSTGIPFLDHMLDQLASHGLFDIHVKATGDTHIDDHHSNEDIAL 677
           T++  +   DG G++  +    ++DH+   +   GL D+   +TG T  + H +N +  +
Sbjct: 236 THIGPRTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVVQGSTGVTISNSHFTNHNDVM 295

Query: 678 AIGTA 692
             G +
Sbjct: 296 LFGAS 300



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>Os02g0488600:Os02g0488600 |
          Length = 675

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
 Frame = +3

Query: 180 SPELPSH*HQPEPRPAGFRTLRGLSLMTTAPSVSLSLSRPHPECAPLIPRSSVRTGAGVA 359
           SP LP+   +P PRP               P ++ +  RP P  A   P +     A  A
Sbjct: 38  SPLLPATRRRP-PRPC-------------PPFLAAARPRPPPPAAAASPMAKSTPAAAAA 83

Query: 360 FPARPYGSLLRLRSR----VMSASGVGSPVAPEDPAAS 461
            P     + LRLR R     ++A GVG   A ++ A++
Sbjct: 84  APEEATAAALRLRLRRLVAAVTAGGVGGGEAFDEAASA 121



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>Os07g0525000:Os07g0525000 |
          Length = 1532

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
 Frame = +2

Query: 137 RAYSIRPRAQAQCSFARTAQPLAPTRA*ACWISHPPRALADDHRAVRLPL--PIPTTPRV 310
           R Y I PR QA         P +P +  A    H P A +     V  P   P PTTPR 
Sbjct: 727 RRYIILPRRQAASRAPSPPAPPSPPQDPAPSPPHAPPAPSPPQAPVSTPPQDPAPTTPRA 786

Query: 311 RPPDP 325
             P P
Sbjct: 787 PTPTP 791



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>AK110223:Os01g0329300 |
          Length = 759

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = +3

Query: 180 SPELPSH*HQPEPRPAGFRTLRGLSLMTTAPSVSLSLSRPHPEC 311
           +P +P   H P   PA   T   L   TTAPS   S S P P C
Sbjct: 292 APTMPPPAHAPAETPAPPTTPPALPPATTAPSPKNSSSSPPPPC 335



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>AK072583:Os06g0583900 |
          Length = 448

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 525 DGTGVADCSTGIPFLDHMLDQLASHGLFDIHVKATGDTHIDDHHSNEDIALAIGTA 692
           DG G++   +   +LDH+       GL D+  K+TG T  + H +N +  +  G++
Sbjct: 246 DGDGISIFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFGSS 301



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>Os04g0609900:Os04g0609900 |
          Length = 1105

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 278 LPLPIPTTPRVRPPDPQILGEDRSWGRLPRSAVR 379
           +P+P+P  P    P   ILG   +W R P SAVR
Sbjct: 131 VPVPVPVAPAPAQP---ILGGREAWQRRPNSAVR 161



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>AK109265: |
          Length = 384

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 460 EAAGSSGATGEPTPLADMTRDLRRSNDPYGRAGKATPAPVLTE 332
           EAA ++G   EPTP +  T+  +  + P  +A K  PA   T+
Sbjct: 110 EAAAAAGIVPEPTPSSSSTKASKSESKPKTKATKIAPAAPATK 152



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>Os07g0521800:Os07g0521800 |
          Length = 1100

 Score = 28.5 bits (62), Expect(2) = 3.1
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 257 DDHRAVRLPLPIPTTPRVRPPDPQILGEDRSWGRLPRSAVRVVASP 394
           DD  A+R  LP+P TP      P ++G D    +L +  +R  A P
Sbjct: 240 DDVGAMRSVLPVPATP------PAVIGRDEEQQQLVKMILRPGAPP 279



 Score = 20.4 bits (41), Expect(2) = 3.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 426 GSPVAPEDPAASC 464
           G+P  P+D A SC
Sbjct: 276 GAPPCPQDGAESC 288



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>AK099798:Os12g0515400 |
          Length = 548

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 26/68 (38%), Positives = 29/68 (42%)
 Frame = +3

Query: 171 SAASPELPSH*HQPEPRPAGFRTLRGLSLMTTAPSVSLSLSRPHPECAPLIPRSSVRTGA 350
           SAA+  L  H      RP     L  L L   +PS SLSLSRP P      PR      +
Sbjct: 6   SAATAPLTCHHLGLRLRPR----LPSLPLRPLSPSPSLSLSRPTPLTPSPPPRHRALHAS 61

Query: 351 GVAFPARP 374
             A PA P
Sbjct: 62  ASAAPAAP 69



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>AK106923: |
          Length = 252

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = +2

Query: 137 RAYSIRPRAQAQCSFARTAQPLAPTRA*ACWISHPPRALADDHRAVRLPLPIPTTPRVRP 316
           R  S +P  Q +    R  QPL P        SH P A +     VRLP   P + R +P
Sbjct: 114 RPASRQPHRQPRQLLGRCHQPLPPA-------SHRPAAPSPASPVVRLPRQTPPSSRHQP 166

Query: 317 P 319
           P
Sbjct: 167 P 167



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>Os08g0400200:Os08g0400200 |
          Length = 1292

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 398 PQAKQRPVRPSGEGDPSSGPHRGSGDQGGALG 303
           P   +RP    G GD  SG  RG G++G + G
Sbjct: 46  PPPPRRPAAAGGRGDEGSGGVRGRGEEGTSRG 77



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>Os03g0169500:Os03g0169500 |
          Length = 598

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 755 KWCRKMPKSVDSFSISKCLK*RRSNC*SNIFIRVMII-NVSVTRRLHMYVKQSMRSQLIK 579
           KW RK+PK+  +F   +       +C +N F R+ +I  VSV ++LH+        +++ 
Sbjct: 344 KWQRKLPKTRQAFFNDRMEHVTGLSC-NNFFTRLYVIQGVSVWKKLHLLYSFFFVRRVVA 402

Query: 578 HVIQERYPCAAV 543
            ++   + C  +
Sbjct: 403 PILTFLFYCVVI 414



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>Os09g0425300:Os09g0425300 |
          Length = 294

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 12/17 (70%), Positives = 15/17 (88%), Gaps = 1/17 (5%)
 Frame = +2

Query: 281 PLPIPT-TPRVRPPDPQ 328
           P+PIPT +PR RPPDP+
Sbjct: 136 PMPIPTPSPRPRPPDPE 152



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>AK101566:Os11g0208100 |
          Length = 436

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +3

Query: 387 LRLRSRVMSASGVGSPVAPEDPAASCRLGEVKRVTKETNVHVKVNLDGTGVADCSTGIPF 566
           L+++   ++A  + SP       ASC      R        V + LDG     CS  +PF
Sbjct: 181 LKMKCCRINAEKMSSPSVKILSLASCEFYPATRTQMSFPSVVSLELDG-----CSGSVPF 235

Query: 567 LDHMLDQLASHGLFD 611
           L+ M   +A+  +FD
Sbjct: 236 LESMPSLVAAIVIFD 250



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>AK111978: |
          Length = 225

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 884  CEYIWDDASHPSARGEQLTPYYRGMFQSIC*GPSASNRIRLAPTWHCSQLQRCSVKVVVF 1063
            C   WD A      G +   Y +G    I    ++ N  R  P W+   ++ C V + + 
Sbjct: 72   CFNCWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRNTYRSVPNWYRDIVRVCDV-IPMV 130

Query: 1064 LQDQKLDAP 1090
            L   K+DAP
Sbjct: 131  LVGNKVDAP 139



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>AK110018: |
          Length = 880

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/79 (27%), Positives = 30/79 (37%)
 Frame = -1

Query: 469 NLHEAAGSSGATGEPTPLADMTRDLRRSNDPYGRAGKATPAPVLTEDLGIRGAHSGCGRD 290
           ++  A  SSG T  P    D+   L  S    G  G A+  P    D    G H+     
Sbjct: 201 DMARAGSSSGGTPGPMTQQDIDNLLAMSRAQAGNQGDASAFPCTYCDKVYTGKHARSIWR 260

Query: 289 RERETDGAVVISESPRRVR 233
           R  +    + +S  PRR R
Sbjct: 261 RHLQDKHNIPLSAQPRRTR 279



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>AK107713:Os09g0279800 |
          Length = 131

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
 Frame = -1

Query: 472 PNLHEAAGSSGATGEPTPLADMTRDLRRSNDPYGRAGKATPAP--VLTEDLGIRGAHSGC 299
           P      G  G      PL     D RRSN P G    ATP P  +       R A  G 
Sbjct: 63  PRHRRVVGGGGEDAGAAPL-----DRRRSNPPTGAVAVATPPPLRLAPAPSSCRSALCGW 117

Query: 298 GRDRERE 278
            R R RE
Sbjct: 118 KRKRGRE 124



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>AK105371:Os07g0417200 |
          Length = 362

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 1123 PSVSSYHSIRRGRIQFLILQEHYDLDRTPL 1034
            PS+  YH++   R    +L E+Y  DRTP+
Sbjct: 304  PSMPHYHAMEATRAARPVLGEYYKFDRTPI 333



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>Os12g0582000:Os12g0582000 |
          Length = 552

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 162 LRLSAASPELPSH*HQPEPRPAGFRTLRGLSLMTTA 269
           LRL  A P +P+H    +    GFR  RG  ++  A
Sbjct: 408 LRLRTAGPVIPAHEAMEDTTVGGFRVARGTKVLVNA 443



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>AK110090: |
          Length = 860

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 165 RLSAASPELPSH*HQPEPRPAGFRTLRGLSLMTTAPS 275
           +L   S E P+    PEP+PA      G S ++ APS
Sbjct: 416 KLGLRSSETPARTETPEPKPATEENAAGASAISMAPS 452



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>AK119848: |
          Length = 555

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -1

Query: 394 RRSNDP---YGRAGKATPAPVLTEDLGIRGA--HSGCGRDRERETD 272
           RR N P   YG  G   P+P+   D  +      SG G DRERE D
Sbjct: 180 RRHNSPPPRYGYGGLRPPSPIRYRDGRMVSPVRRSGGGEDRERERD 225



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>AK110176: |
          Length = 1237

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 457 AAGSSGATGEPTP--LADMTRDLRRSNDPYGRAG 362
           A+ S GA G  +P  LAD    L RS+D  GRAG
Sbjct: 858 ASSSRGAPGTDSPVNLADSVGSLGRSHDAAGRAG 891



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>AK071236:Os04g0673800 |
          Length = 180

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +2

Query: 1019 HCSQLQRCSVKVVVFLQDQKLDAPPPDAVIGGNRWTVSCYISVATCAWSAKWLAVAVLLF 1198
            HC + QR  +KV+          PPP +    N      + S A  A  A  LAVA +L 
Sbjct: 118  HCERGQRMVIKVIGHDAPPPASPPPPPS----NAPPTPPHPSGAASALGAGGLAVAAMLL 173

Query: 1199 SGFIY 1213
              F+Y
Sbjct: 174  PVFVY 178


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 43,296,006
Number of extensions: 1068253
Number of successful extensions: 3808
Number of sequences better than 10.0: 30
Number of HSP's gapped: 3797
Number of HSP's successfully gapped: 31
Length of query: 491
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 386
Effective length of database: 11,195,550
Effective search space: 4321482300
Effective search space used: 4321482300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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