ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6o15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U02690.1|TAU02690 Triticum aestivum imidazoleglycerolphosphate dehydratase mRNA, partial cds Length = 1414 Score = 755 bits (381), Expect = 0.0 Identities = 537/589 (91%) Strand = Plus / Plus Query: 474 gaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggcacc 533 ||||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||||||| Sbjct: 456 gaggtcaagcgggtaaccaaggaaacaaatgtgcatgtcaagatcaacctggacggcact 515 Query: 534 ggcgttgccgactgcagcacagggataccgttcttggatcacatgcttgatcaactggct 593 || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 ggtgttgcaaactccagcacagggataccgttcttggatcacatgcttgatcaactggca 575 Query: 594 tctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacattgatgatcat 653 ||||||||||||||||| || | |||||||||||||||||||| ||||||||||||||| Sbjct: 576 tctcatggactgtttgatgtatacgtgaaggcgacgggtgacacacacattgatgatcat 635 Query: 654 cactcgaatgaagatattgctttagcaattggaacggcgttacttcaagcacttggagat 713 ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 636 cactcaaatgaggatattgctttagcaattggaacggcattacttcaagcacttggtgac 695 Query: 714 cgaaaaggaatcaaccgatttgggcattttacggcaccacttgatgaggcagcagttgag 773 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 696 cgaaaaggaattaaccggtttgggcattttacagcaccacttgatgaggcagcagttgag 755 Query: 774 gttatactggatctatctggtcgacctcatttgagctgcggcttaagtattcctactgca 833 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | Sbjct: 756 gttatactggatctatctggtcgacctcatttgagctgcggcttaagcattcctaccgaa 815 Query: 834 cgggttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaataca 893 | |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 816 agagttggcacatatgacacacagctagttgagcatttcttccagtcccttgtgaataca 875 Query: 894 tctgggatgacgcttcacatccgtcagctcgcggggaacaactcacaccatattatcgag 953 ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 876 tctggcatgacgcttcacatccgtcagcttgcgggaaacaactcacaccatattatcgag 935 Query: 954 gcatgtttcaaagcatttgctagggcccttcggcaagcaacagaatacgacttgcgccga 1013 ||| ||||||||||||||| ||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 936 gcaactttcaaagcatttgccagggcgcttcgacaagcaacggaatatgacttacgccgc 995 Query: 1014 cgtggcactgttcccagctccaaaggtgttctgtcaaggtcgtagtgtt 1062 | |||||| | || ||||| |||||||||||||||||||| ||||||| Sbjct: 996 cagggcactatgccaagctcaaaaggtgttctgtcaaggtcttagtgtt 1044
>ref|NM_001060422.1| Oryza sativa (japonica cultivar-group) Os04g0617800 (Os04g0617800) mRNA, complete cds Length = 1312 Score = 650 bits (328), Expect = 0.0 Identities = 526/592 (88%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 ||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 307 ggagaagtcaagagggtgaccaaggagacgaatgtgcatgtgaagatcaacctggatggc 366 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgcttgatcaactg 590 || || |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 367 actggtgttgccgattgcagcacagggatacctttcttggatcacatgctcgatcaactg 426 Query: 591 gcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacattgatgat 650 || |||||||| || |||||| || ||| ||||| | ||||||||||||||| ||||| Sbjct: 427 gcatctcatgggctctttgacgtatgtgttaaggcaaagggtgacactcacatcgatgac 486 Query: 651 catcactcgaatgaagatattgctttagcaattggaacggcgttacttcaagcacttgga 710 |||||||| || ||||| || ||||| |||||||||||||| ||||| ||||||||||| Sbjct: 487 catcactcaaacgaagacatcgctttggcaattggaacggcactacttgaagcacttgga 546 Query: 711 gatcgaaaaggaatcaaccgatttgggcattttacggcaccacttgatgaggcagcagtt 770 |||||||||||||| || || |||||||||||||| |||||||||||||||||||| ||| Sbjct: 547 gatcgaaaaggaattaatcggtttgggcattttacagcaccacttgatgaggcagcggtt 606 Query: 771 gaggttatactggatctatctggtcgacctcatttgagctgcggcttaagtattcctact 830 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 607 gaggttatactggatctatctggtcgtcctcatttgagttgcggcttaagtattccgact 666 Query: 831 gcacgggttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaat 890 | | ||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 667 gagagagttggcacatacgatactcagctagttgagcactttttccaatctcttgtgaat 726 Query: 891 acatctgggatgacgcttcacatccgtcagctcgcggggaacaactcacaccatattatc 950 |||||||||||||| ||||||||||||||||| || || || ||||||||||||||||| Sbjct: 727 acatctgggatgacacttcacatccgtcagcttgctggaaaaaactcacaccatattatt 786 Query: 951 gaggcatgtttcaaagcatttgctagggcccttcggcaagcaacagaatacgacttgcgc 1010 |||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 787 gaggcaactttcaaagcatttgctagagcccttcgacaagcaacagaatatgacttgcgc 846 Query: 1011 cgacgtggcactgttcccagctccaaaggtgttctgtcaaggtcgtagtgtt 1062 ||||| |||||||| |||||||| |||||||| |||||||||| ||||||| Sbjct: 847 cgacgcggcactgtccccagctcaaaaggtgtgttgtcaaggtcatagtgtt 898 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gctggggtcgccttccccgctcggccgtacgg 379 |||||||||||| |||||||||||||| |||| Sbjct: 175 gctggggtcgccctccccgctcggccgcacgg 206 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 gatgaccaccgcgccgtccgtctccctctccct 289 |||||||||||||| || |||||||| |||||| Sbjct: 84 gatgaccaccgcgcggttcgtctccccctccct 116
>dbj|AK073351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I19, full insert sequence Length = 1315 Score = 650 bits (328), Expect = 0.0 Identities = 526/592 (88%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 ||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 310 ggagaagtcaagagggtgaccaaggagacgaatgtgcatgtgaagatcaacctggatggc 369 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgcttgatcaactg 590 || || |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 370 actggtgttgccgattgcagcacagggatacctttcttggatcacatgctcgatcaactg 429 Query: 591 gcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacattgatgat 650 || |||||||| || |||||| || ||| ||||| | ||||||||||||||| ||||| Sbjct: 430 gcatctcatgggctctttgacgtatgtgttaaggcaaagggtgacactcacatcgatgac 489 Query: 651 catcactcgaatgaagatattgctttagcaattggaacggcgttacttcaagcacttgga 710 |||||||| || ||||| || ||||| |||||||||||||| ||||| ||||||||||| Sbjct: 490 catcactcaaacgaagacatcgctttggcaattggaacggcactacttgaagcacttgga 549 Query: 711 gatcgaaaaggaatcaaccgatttgggcattttacggcaccacttgatgaggcagcagtt 770 |||||||||||||| || || |||||||||||||| |||||||||||||||||||| ||| Sbjct: 550 gatcgaaaaggaattaatcggtttgggcattttacagcaccacttgatgaggcagcggtt 609 Query: 771 gaggttatactggatctatctggtcgacctcatttgagctgcggcttaagtattcctact 830 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 610 gaggttatactggatctatctggtcgtcctcatttgagttgcggcttaagtattccgact 669 Query: 831 gcacgggttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaat 890 | | ||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 670 gagagagttggcacatacgatactcagctagttgagcactttttccaatctcttgtgaat 729 Query: 891 acatctgggatgacgcttcacatccgtcagctcgcggggaacaactcacaccatattatc 950 |||||||||||||| ||||||||||||||||| || || || ||||||||||||||||| Sbjct: 730 acatctgggatgacacttcacatccgtcagcttgctggaaaaaactcacaccatattatt 789 Query: 951 gaggcatgtttcaaagcatttgctagggcccttcggcaagcaacagaatacgacttgcgc 1010 |||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 790 gaggcaactttcaaagcatttgctagagcccttcgacaagcaacagaatatgacttgcgc 849 Query: 1011 cgacgtggcactgttcccagctccaaaggtgttctgtcaaggtcgtagtgtt 1062 ||||| |||||||| |||||||| |||||||| |||||||||| ||||||| Sbjct: 850 cgacgcggcactgtccccagctcaaaaggtgtgttgtcaaggtcatagtgtt 901 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gctggggtcgccttccccgctcggccgtacgg 379 |||||||||||| |||||||||||||| |||| Sbjct: 178 gctggggtcgccctccccgctcggccgcacgg 209 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 gatgaccaccgcgccgtccgtctccctctccct 289 |||||||||||||| || |||||||| |||||| Sbjct: 87 gatgaccaccgcgcggttcgtctccccctccct 119
>gb|BT018791.1| Zea mays clone EL01N0527H02.d mRNA sequence Length = 1272 Score = 515 bits (260), Expect = e-142 Identities = 494/572 (86%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 |||||||| |||||||| || || |||||||||||||| || ||| |||||||||| ||| Sbjct: 247 ggagaggttaagagggtgaccaaagagacaaatgtgcacgtgaagatcaaccttgatggc 306 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgcttgatcaactg 590 || || || ||||| || |||||||||||||||||||||||||||||||| ||||| || Sbjct: 307 actggtgtcgccgagtgtagcacagggataccgttcttggatcacatgctcgatcagttg 366 Query: 591 gcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacattgatgat 650 || || |||||||| ||||| | | || || || | || ||||| || ||||||||| Sbjct: 367 gcatcacatggactctttgatgtctacgttaaagcaataggcgacacccatattgatgat 426 Query: 651 catcactcgaatgaagatattgctttagcaattggaacggcgttacttcaagcacttgga 710 |||||||| ||||| || |||||||| |||||||||||||| ||||| |||||||||| Sbjct: 427 catcactcaaatgaggacattgctttggcaattggaacggcactacttgaagcacttggt 486 Query: 711 gatcgaaaaggaatcaaccgatttgggcattttacggcaccacttgatgaggcagcagtt 770 |||||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct: 487 gatcgaaagggaattaaccgatttggtcattttacagcaccgcttgatgaggcagcggtt 546 Query: 771 gaggttatactggatctatctggtcgacctcatttgagctgcggcttaagtattcctact 830 ||||||||||||||||| |||||||| |||||||| ||||| |||||| |||||||||| Sbjct: 547 gaggttatactggatctgtctggtcgccctcatttaagctgtggcttagatattcctact 606 Query: 831 gcacgggttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaat 890 | | ||||||||||||||||||||||| ||||||||||||||||| ||| | ||||| Sbjct: 607 caaagagttggcacatatgatacacagctggttgagcacttcttccaatctgtggtgaac 666 Query: 891 acatctgggatgacgcttcacatccgtcagctcgcggggaacaactcacaccatattatc 950 |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 667 acatctgggatgactcttcacatccgtcagcttgctgggaaaaactcacaccatatcatc 726 Query: 951 gaggcatgtttcaaagcatttgctagggcccttcggcaagcaacagaatacgacttgcgc 1010 ||||||| ||||||||| |||||| |||||||||| || |||||||| || ||| ||||| Sbjct: 727 gaggcatctttcaaagcgtttgctcgggcccttcgacaggcaacagagtatgacctgcgc 786 Query: 1011 cgacgtggcactgttcccagctccaaaggtgt 1042 || | |||||||| ||||||||||||||||| Sbjct: 787 cgtcaaggcactgtccccagctccaaaggtgt 818
>gb|AY108347.1| Zea mays PCO100071 mRNA sequence Length = 1294 Score = 507 bits (256), Expect = e-140 Identities = 493/572 (86%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 |||||||| |||||||| || || |||||||||||||| || ||| |||||||||| ||| Sbjct: 267 ggagaggttaagagggtgaccaaagagacaaatgtgcacgtgaagatcaaccttgatggc 326 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgcttgatcaactg 590 || || || ||||| || ||||||||||||| |||||||||||||||||| ||||| || Sbjct: 327 actggtgtcgccgagtgtagcacagggatactgttcttggatcacatgctcgatcagttg 386 Query: 591 gcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacattgatgat 650 || || |||||||| ||||| | | || || || | || ||||| || ||||||||| Sbjct: 387 gcatcacatggactctttgatgtctacgttaaagcaataggcgacacccatattgatgat 446 Query: 651 catcactcgaatgaagatattgctttagcaattggaacggcgttacttcaagcacttgga 710 |||||||| ||||| || |||||||| |||||||||||||| ||||| |||||||||| Sbjct: 447 catcactcaaatgaggacattgctttggcaattggaacggcactacttgaagcacttggt 506 Query: 711 gatcgaaaaggaatcaaccgatttgggcattttacggcaccacttgatgaggcagcagtt 770 |||||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct: 507 gatcgaaagggaattaaccgatttggtcattttacagcaccgcttgatgaggcagcggtt 566 Query: 771 gaggttatactggatctatctggtcgacctcatttgagctgcggcttaagtattcctact 830 ||||||||||||||||| |||||||| |||||||| ||||| |||||| |||||||||| Sbjct: 567 gaggttatactggatctgtctggtcgccctcatttaagctgtggcttagatattcctact 626 Query: 831 gcacgggttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaat 890 | | ||||||||||||||||||||||| ||||||||||||||||| ||| | ||||| Sbjct: 627 caaagagttggcacatatgatacacagctggttgagcacttcttccaatctgtggtgaac 686 Query: 891 acatctgggatgacgcttcacatccgtcagctcgcggggaacaactcacaccatattatc 950 |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 687 acatctgggatgactcttcacatccgtcagcttgctgggaaaaactcacaccatatcatc 746 Query: 951 gaggcatgtttcaaagcatttgctagggcccttcggcaagcaacagaatacgacttgcgc 1010 ||||||| ||||||||| |||||| |||||||||| || |||||||| || ||| ||||| Sbjct: 747 gaggcatctttcaaagcgtttgctcgggcccttcgacaggcaacagagtatgacctgcgc 806 Query: 1011 cgacgtggcactgttcccagctccaaaggtgt 1042 || | |||||||| ||||||||||||||||| Sbjct: 807 cgtcaaggcactgtccccagctccaaaggtgt 838
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 131 bits (66), Expect = 8e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 ||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 44024 ggagaagtcaagagggtgaccaaggagacgaatgtgcatgtgaagatcaacctggatggc 44083 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgct 580 || || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 44084 actggtgttgccgattgcagcacagggataccgttcttggatcacatgct 44133 Score = 131 bits (66), Expect = 8e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 694 tacttcaagcacttggagatcgaaaaggaatcaaccgatttgggcattttacggcaccac 753 ||||| ||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 45291 tacttgaagcacttggagatcgaaaaggaattaatcggtttgggcattttacagcaccac 45350 Query: 754 ttgatgaggcagcagttgaggttatactgg 783 ||||||||||||| |||||||||||||||| Sbjct: 45351 ttgatgaggcagcggttgaggttatactgg 45380 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 933 aactcacaccatattatcgaggcatgtttcaaagcatttgctagggcccttcggcaagca 992 ||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||| Sbjct: 46484 aactcacaccatattattgaggcaactttcaaagcatttgctagagcccttcgacaagca 46543 Query: 993 acagaatacgacttgcgccgacgtggcactgttcccag 1030 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 46544 acagaatatgacttgcgccgacgcggcactgtccccag 46581 Score = 99.6 bits (50), Expect = 3e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 855 cagctcgttgagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatc 914 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 46216 cagctagttgagcactttttccaatctcttgtgaatacatctgggatgacacttcacatc 46275 Query: 915 cgtcag 920 |||||| Sbjct: 46276 cgtcag 46281 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Plus Query: 585 caactggcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacatt 644 |||||||| |||||||| || |||||| || ||| ||||| | ||||||||||||||| Sbjct: 44933 caactggcatctcatgggctctttgacgtatgtgttaaggcaaagggtgacactcacatc 44992 Query: 645 gatgatcatcactcgaatgaagatattgctttagcaattggaacgg 690 ||||| |||||||| || ||||| || ||||| ||||||||||||| Sbjct: 44993 gatgaccatcactcaaacgaagacatcgctttggcaattggaacgg 45038 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 782 ggatctatctggtcgacctcatttgagctgcggcttaagtattcctactgcacgggttgg 841 ||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||| Sbjct: 45837 ggatctatctggtcgtcctcatttgagttgcggcttaagtattccgactgagagagttgg 45896 Query: 842 cacatatgatac 853 |||||| ||||| Sbjct: 45897 cacatacgatac 45908 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gctggggtcgccttccccgctcggccgtacgg 379 |||||||||||| |||||||||||||| |||| Sbjct: 43701 gctggggtcgccctccccgctcggccgcacgg 43732 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 gatgaccaccgcgccgtccgtctccctctccct 289 |||||||||||||| || |||||||| |||||| Sbjct: 43610 gatgaccaccgcgcggttcgtctccccctccct 43642
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 131 bits (66), Expect = 8e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 694 tacttcaagcacttggagatcgaaaaggaatcaaccgatttgggcattttacggcaccac 753 ||||| ||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 31425354 tacttgaagcacttggagatcgaaaaggaattaatcggtttgggcattttacagcaccac 31425413 Query: 754 ttgatgaggcagcagttgaggttatactgg 783 ||||||||||||| |||||||||||||||| Sbjct: 31425414 ttgatgaggcagcggttgaggttatactgg 31425443 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 933 aactcacaccatattatcgaggcatgtttcaaagcatttgctagggcccttcggcaagca 992 ||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||| Sbjct: 31426549 aactcacaccatattattgaggcaactttcaaagcatttgctagagcccttcgacaagca 31426608 Query: 993 acagaatacgacttgcgccgacgtggcactgttcccag 1030 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 31426609 acagaatatgacttgcgccgacgcggcactgtccccag 31426646 Score = 123 bits (62), Expect = 2e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 ||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 31424087 ggagaagtcaagagggtgaccaaggagacgaatgtgcatgtgaagatcaacctggatggc 31424146 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgct 580 || || |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 31424147 actggtgttgccgattgcagcacagggatacctttcttggatcacatgct 31424196 Score = 99.6 bits (50), Expect = 3e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 855 cagctcgttgagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatc 914 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 31426281 cagctagttgagcactttttccaatctcttgtgaatacatctgggatgacacttcacatc 31426340 Query: 915 cgtcag 920 |||||| Sbjct: 31426341 cgtcag 31426346 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Plus Query: 585 caactggcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacatt 644 |||||||| |||||||| || |||||| || ||| ||||| | ||||||||||||||| Sbjct: 31424996 caactggcatctcatgggctctttgacgtatgtgttaaggcaaagggtgacactcacatc 31425055 Query: 645 gatgatcatcactcgaatgaagatattgctttagcaattggaacgg 690 ||||| |||||||| || ||||| || ||||| ||||||||||||| Sbjct: 31425056 gatgaccatcactcaaacgaagacatcgctttggcaattggaacgg 31425101 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 782 ggatctatctggtcgacctcatttgagctgcggcttaagtattcctactgcacgggttgg 841 ||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||| Sbjct: 31425903 ggatctatctggtcgtcctcatttgagttgcggcttaagtattccgactgagagagttgg 31425962 Query: 842 cacatatgatac 853 |||||| ||||| Sbjct: 31425963 cacatacgatac 31425974 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gctggggtcgccttccccgctcggccgtacgg 379 |||||||||||| |||||||||||||| |||| Sbjct: 31423764 gctggggtcgccctccccgctcggccgcacgg 31423795 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 gatgaccaccgcgccgtccgtctccctctccct 289 |||||||||||||| || |||||||| |||||| Sbjct: 31423673 gatgaccaccgcgcggttcgtctccccctccct 31423705
>emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093O08, complete sequence Length = 148860 Score = 131 bits (66), Expect = 8e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 694 tacttcaagcacttggagatcgaaaaggaatcaaccgatttgggcattttacggcaccac 753 ||||| ||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 122162 tacttgaagcacttggagatcgaaaaggaattaatcggtttgggcattttacagcaccac 122221 Query: 754 ttgatgaggcagcagttgaggttatactgg 783 ||||||||||||| |||||||||||||||| Sbjct: 122222 ttgatgaggcagcggttgaggttatactgg 122251 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 933 aactcacaccatattatcgaggcatgtttcaaagcatttgctagggcccttcggcaagca 992 ||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||| Sbjct: 123357 aactcacaccatattattgaggcaactttcaaagcatttgctagagcccttcgacaagca 123416 Query: 993 acagaatacgacttgcgccgacgtggcactgttcccag 1030 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 123417 acagaatatgacttgcgccgacgcggcactgtccccag 123454 Score = 123 bits (62), Expect = 2e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 ||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 120895 ggagaagtcaagagggtgaccaaggagacgaatgtgcatgtgaagatcaacctggatggc 120954 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgct 580 || || |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 120955 actggtgttgccgattgcagcacagggatacctttcttggatcacatgct 121004 Score = 99.6 bits (50), Expect = 3e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 855 cagctcgttgagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatc 914 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 123089 cagctagttgagcactttttccaatctcttgtgaatacatctgggatgacacttcacatc 123148 Query: 915 cgtcag 920 |||||| Sbjct: 123149 cgtcag 123154 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Plus Query: 585 caactggcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacatt 644 |||||||| |||||||| || |||||| || ||| ||||| | ||||||||||||||| Sbjct: 121804 caactggcatctcatgggctctttgacgtatgtgttaaggcaaagggtgacactcacatc 121863 Query: 645 gatgatcatcactcgaatgaagatattgctttagcaattggaacgg 690 ||||| |||||||| || ||||| || ||||| ||||||||||||| Sbjct: 121864 gatgaccatcactcaaacgaagacatcgctttggcaattggaacgg 121909 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 782 ggatctatctggtcgacctcatttgagctgcggcttaagtattcctactgcacgggttgg 841 ||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||| Sbjct: 122711 ggatctatctggtcgtcctcatttgagttgcggcttaagtattccgactgagagagttgg 122770 Query: 842 cacatatgatac 853 |||||| ||||| Sbjct: 122771 cacatacgatac 122782 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gctggggtcgccttccccgctcggccgtacgg 379 |||||||||||| |||||||||||||| |||| Sbjct: 120572 gctggggtcgccctccccgctcggccgcacgg 120603 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 gatgaccaccgcgccgtccgtctccctctccct 289 |||||||||||||| || |||||||| |||||| Sbjct: 120481 gatgaccaccgcgcggttcgtctccccctccct 120513
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 131 bits (66), Expect = 8e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 694 tacttcaagcacttggagatcgaaaaggaatcaaccgatttgggcattttacggcaccac 753 ||||| ||||||||||||||||||||||||| || || |||||||||||||| ||||||| Sbjct: 3037 tacttgaagcacttggagatcgaaaaggaattaatcggtttgggcattttacagcaccac 3096 Query: 754 ttgatgaggcagcagttgaggttatactgg 783 ||||||||||||| |||||||||||||||| Sbjct: 3097 ttgatgaggcagcggttgaggttatactgg 3126 Score = 131 bits (66), Expect = 8e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 933 aactcacaccatattatcgaggcatgtttcaaagcatttgctagggcccttcggcaagca 992 ||||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||| Sbjct: 4232 aactcacaccatattattgaggcaactttcaaagcatttgctagagcccttcgacaagca 4291 Query: 993 acagaatacgacttgcgccgacgtggcactgttcccag 1030 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 4292 acagaatatgacttgcgccgacgcggcactgtccccag 4329 Score = 123 bits (62), Expect = 2e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 471 ggagaggtcaagagggtaacgaaggagacaaatgtgcatgtcaaggtcaaccttgacggc 530 ||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 1770 ggagaagtcaagagggtgaccaaggagacgaatgtgcatgtgaagatcaacctggatggc 1829 Query: 531 accggcgttgccgactgcagcacagggataccgttcttggatcacatgct 580 || || |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1830 actggtgttgccgattgcagcacagggatacctttcttggatcacatgct 1879 Score = 99.6 bits (50), Expect = 3e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 855 cagctcgttgagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatc 914 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 3964 cagctagttgagcactttttccaatctcttgtgaatacatctgggatgacacttcacatc 4023 Query: 915 cgtcag 920 |||||| Sbjct: 4024 cgtcag 4029 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Plus Query: 585 caactggcttctcatggactgtttgacatacatgtgaaggcgacgggtgacactcacatt 644 |||||||| |||||||| || |||||| || ||| ||||| | ||||||||||||||| Sbjct: 2679 caactggcatctcatgggctctttgacgtatgtgttaaggcaaagggtgacactcacatc 2738 Query: 645 gatgatcatcactcgaatgaagatattgctttagcaattggaacgg 690 ||||| |||||||| || ||||| || ||||| ||||||||||||| Sbjct: 2739 gatgaccatcactcaaacgaagacatcgctttggcaattggaacgg 2784 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 782 ggatctatctggtcgacctcatttgagctgcggcttaagtattcctactgcacgggttgg 841 ||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||| Sbjct: 3586 ggatctatctggtcgtcctcatttgagttgcggcttaagtattccgactgagagagttgg 3645 Query: 842 cacatatgatac 853 |||||| ||||| Sbjct: 3646 cacatacgatac 3657 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gctggggtcgccttccccgctcggccgtacgg 379 |||||||||||| |||||||||||||| |||| Sbjct: 1447 gctggggtcgccctccccgctcggccgcacgg 1478 Score = 42.1 bits (21), Expect = 5.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 257 gatgaccaccgcgccgtccgtctccctctccct 289 |||||||||||||| || |||||||| |||||| Sbjct: 1356 gatgaccaccgcgcggttcgtctccccctccct 1388
>gb|U49978.1|PSU49978 Pisum sativum imidazoleglycerol-phosphate dehydratase (PSHIS3) mRNA, complete cds Length = 1229 Score = 83.8 bits (42), Expect = 2e-12 Identities = 135/166 (81%) Strand = Plus / Plus Query: 835 gggttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacat 894 ||||||| |||||||| || ||| | || ||||| || |||||||| | |||||||| | Sbjct: 657 gggttgggacatatgacacgcaggtggtggagcattttctccagtctatagtgaatactt 716 Query: 895 ctgggatgacgcttcacatccgtcagctcgcggggaacaactcacaccatattatcgagg 954 |||| ||||| |||||||| || ||||| || || | ||||| || |||||||| || | Sbjct: 717 ctggtatgacacttcacattcgccagcttgctggaagaaactctcatcatattattgaag 776 Query: 955 catgtttcaaagcatttgctagggcccttcggcaagcaacagaata 1000 || ||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 777 caactttcaaagcgtttgcaagggctcttcgacaagcaacagaata 822 Score = 52.0 bits (26), Expect = 0.006 Identities = 98/122 (80%) Strand = Plus / Plus Query: 570 gatcacatgcttgatcaactggcttctcatggactgtttgacatacatgtgaaggcgacg 629 ||||| ||||| |||||||| ||||| ||||| || ||||| |||| |||||||| ||| Sbjct: 392 gatcatatgctagatcaacttgcttcacatgggctatttgatgtacacgtgaaggctacg 451 Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaacg 689 || || ||||| |||||||||||| | |||||||| | ||| | || ||||||||| Sbjct: 452 ggggatgtacacatcgatgatcatcacacaaatgaagacgtggctcttgctattggaacg 511 Query: 690 gc 691 || Sbjct: 512 gc 513
>ref|NM_180294.1| Arabidopsis thaliana imidazoleglycerol-phosphate dehydratase (AT3G22425) mRNA, complete cds Length = 1238 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| ||||||||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 647 gttggaacatatgatactcagttggtggagcactttttccagtcgttggtgaatacttct 706 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| ||||||||||| |||||||| Sbjct: 707 ggtatgactcttcacatccggcagctcgc 735 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 448 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 498
>gb|AY570533.1| Alyssum lesbiacum imidazole glycerol-phosphate dehydratase (IGPD) mRNA, partial cds Length = 388 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 864 gagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagctc 923 ||||||||||||||||| | |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 259 gagcacttcttccagtcgttggtgaatacttctggtatgacgcttcacatccgacagctt 318 Query: 924 gcggggaacaactcaca 940 || || || |||||||| Sbjct: 319 gctggtaaaaactcaca 335 Score = 46.1 bits (23), Expect = 0.36 Identities = 50/59 (84%) Strand = Plus / Plus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 |||||||||||||| || ||||||||| | |||||||| ||||| | || |||||||| Sbjct: 25 ggtgacactcacatcgacgatcatcacacaaatgaagacgttgctcttgccattggaac 83
>gb|AY087948.1| Arabidopsis thaliana clone 39832 mRNA, complete sequence Length = 1163 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| ||||||||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 647 gttggaacatatgatactcagttggtggagcactttttccagtcattggtgaatacttct 706 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| ||||||||||| |||||||| Sbjct: 707 ggtatgactcttcacatccggcagctcgc 735 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 448 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 498
>dbj|AK176429.1| Arabidopsis thaliana mRNA for imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL24-18-A02 Length = 1156 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| ||||||||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 604 gttggaacatatgatactcagttggtggagcactttttccagtcgttggtgaatacttct 663 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| ||||||||||| |||||||| Sbjct: 664 ggtatgactcttcacatccggcagctcgc 692 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 405 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 455
>dbj|AK175447.1| Arabidopsis thaliana mRNA for imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL21-87-M08 Length = 1198 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| ||||||||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 646 gttggaacatatgatactcagttggtggagcactttttccagtcgttggtgaatacttct 705 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| ||||||||||| |||||||| Sbjct: 706 ggtatgactcttcacatccggcagctcgc 734 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 447 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 497
>dbj|AK118815.1| Arabidopsis thaliana At3g22425 mRNA for putative imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL21-15-B19 Length = 1189 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| ||||||||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 647 gttggaacatatgatactcagttggtggagcactttttccagtcgttggtgaatacttct 706 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| ||||||||||| |||||||| Sbjct: 707 ggtatgactcttcacatccggcagctcgc 735 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 448 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 498
>dbj|AK176319.1| Arabidopsis thaliana mRNA for imidazoleglycerolphosphate dehydratase, complete cds, clone: RAFL23-29-C18 Length = 1164 Score = 65.9 bits (33), Expect = 4e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| |||| |||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 613 gttggaacatgtgatactcagttggtggagcactttttccagtcgttggtgaatacttct 672 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| ||||||||||| |||||||| Sbjct: 673 ggtatgactcttcacatccggcagctcgc 701 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 414 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 464
>gb|U02689.1|ATU02689 Arabidopsis thaliana imidazoleglycerolphosphate dehydratase mRNA, complete cds Length = 1130 Score = 65.9 bits (33), Expect = 4e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 837 gttggcacatatgatacacagctcgttgagcacttcttccagtctcttgtgaatacatct 896 ||||| ||||||||||| ||| | || |||||||| |||||||| | |||||||| ||| Sbjct: 613 gttggaacatatgatactcagttggtggagcactttttccagtcgttggtgaatacttct 672 Query: 897 gggatgacgcttcacatccgtcagctcgc 925 || ||||| |||||||| || |||||||| Sbjct: 673 ggtatgactcttcacattcggcagctcgc 701 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 414 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 464
>ref|NM_180293.1| Arabidopsis thaliana imidazoleglycerol-phosphate dehydratase (AT3G22425) mRNA, complete cds Length = 1347 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 864 gagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagctc 923 |||||||| |||||||| | |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 783 gagcactttttccagtcgttggtgaatacttctggtatgactcttcacatccggcagctc 842 Query: 924 gc 925 || Sbjct: 843 gc 844 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 448 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 498
>gb|AY070442.1| Arabidopsis thaliana unknown protein (At3g22422) mRNA, complete cds Length = 1364 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 864 gagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagctc 923 |||||||| |||||||| | |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 780 gagcactttttccagtcgttggtgaatacttctggtatgactcttcacatccggcagctc 839 Query: 924 gc 925 || Sbjct: 840 gc 841 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 445 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 495
>ref|NM_117577.3| Arabidopsis thaliana IGPD; imidazoleglycerol-phosphate dehydratase (IGPD) mRNA, complete cds Length = 1112 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagct 922 |||||||||||||| | |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 637 cacttcttccagtcattggtgaatacttctggtatgactcttcacatccgacagct 692 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 400 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 458
>gb|AY094021.1| Arabidopsis thaliana AT4g14910/dl3495c mRNA, complete cds Length = 819 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagct 922 |||||||||||||| | |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 628 cacttcttccagtcattggtgaatacttctggtatgactcttcacatccgacagct 683 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 391 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 449
>gb|AY048237.1| Arabidopsis thaliana AT4g14910/dl3495c mRNA, complete cds Length = 1026 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagct 922 |||||||||||||| | |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 637 cacttcttccagtcattggtgaatacttctggtatgactcttcacatccgacagct 692 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 400 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 458
>emb|BX828562.1|CNS0A3HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL17ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1082 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagct 922 |||||||||||||| | |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 607 cacttcttccagtcattggtgaatacttctggtatgactcttcacatccgacagct 662 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 370 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 428
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 94528 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 94470 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccg 916 |||||||||||||| | |||||||| ||||| ||||| ||||||||||| Sbjct: 93989 cacttcttccagtcattggtgaatacttctggtatgactcttcacatccg 93940
>dbj|AB022215.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB17 Length = 83205 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 638 tcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||||||||||||||||| | ||||||||||| ||| | || |||||||| Sbjct: 72016 tcacattgatgatcatcacactaatgaagatatagctcttgccattggaac 72066 Score = 50.1 bits (25), Expect = 0.023 Identities = 46/53 (86%) Strand = Plus / Plus Query: 864 gagcacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccg 916 |||||||| |||||||| | |||||||| ||||| ||||| ||||||||||| Sbjct: 72599 gagcactttttccagtcgttggtgaatacttctggtatgactcttcacatccg 72651
>emb|BX828744.1|CNS0A3KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZB04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1018 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 391 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 449 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatcc 915 |||||||||||||| | |||||||| ||||| || || |||||||||| Sbjct: 628 cacttcttccagtcattggtgaatacttctggtataactcttcacatcc 676
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagatattgctttagcaattggaac 688 ||||| |||||||||||||||||||| | ||||||||| ||||| | || |||||||| Sbjct: 39982 ggtgatactcacattgatgatcatcatactaatgaagatgttgctcttgccattggaac 39924 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacatccg 916 |||||||||||||| | |||||||| ||||| ||||| ||||||||||| Sbjct: 39443 cacttcttccagtcattggtgaatacttctggtatgactcttcacatccg 39394
>gb|AC187865.2| Populus trichocarpa clone Pop1-4F12, complete sequence Length = 118273 Score = 46.1 bits (23), Expect = 0.36 Identities = 41/47 (87%) Strand = Plus / Plus Query: 867 cacttcttccagtctcttgtgaatacatctgggatgacgcttcacat 913 ||||| |||||||| | |||||||| |||||||||||||| ||||| Sbjct: 29227 cactttttccagtcattggtgaatacttctgggatgacgctgcacat 29273
>emb|BX322799.22| Human DNA sequence from clone RP13-927H1 on chromosome 9, complete sequence Length = 143968 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 ccgccctccgccgcccctcctcc 73 ||||||||||||||||||||||| Sbjct: 12878 ccgccctccgccgcccctcctcc 12856
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 46.1 bits (23), Expect = 0.36 Identities = 35/39 (89%) Strand = Plus / Minus Query: 630 ggtgacactcacattgatgatcatcactcgaatgaagat 668 ||||| ||||||||||||||||| ||| | ||||||||| Sbjct: 305722 ggtgatactcacattgatgatcaccacactaatgaagat 305684
>gb|AF023140.1|AF023140 Thlaspi goesingense imidazoleglycerol phosphate dehydratase (THB1) mRNA, partial cds Length = 1042 Score = 46.1 bits (23), Expect = 0.36 Identities = 68/83 (81%) Strand = Plus / Plus Query: 870 ttcttccagtctcttgtgaatacatctgggatgacgcttcacatccgtcagctcgcgggg 929 ||||||||||| | |||||||| || || ||||| ||||||||||| ||||| || || Sbjct: 638 ttcttccagtcattggtgaatacttcgggtatgacacttcacatccgacagcttgctggt 697 Query: 930 aacaactcacaccatattatcga 952 || ||||| || || |||||||| Sbjct: 698 aaaaactctcatcacattatcga 720
>emb|BX936406.24| Zebrafish DNA sequence from clone DKEY-13K17 in linkage group 17, complete sequence Length = 183483 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 569 ggatcacatgcttgatcaactg 590 |||||||||||||||||||||| Sbjct: 61790 ggatcacatgcttgatcaactg 61769
>gb|AC151968.3| Mus musculus BAC clone RP24-247B20 from chromosome 9, complete sequence Length = 191668 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 297 ccacaccccgagtgcgcccccc 318 |||||||||||||||||||||| Sbjct: 32229 ccacaccccgagtgcgcccccc 32250
>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0039F06, complete sequence Length = 133022 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 ccctccgccgcccctcctcctc 75 |||||||||||||||||||||| Sbjct: 121426 ccctccgccgcccctcctcctc 121447
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 ccctccgccgcccctcctcctc 75 |||||||||||||||||||||| Sbjct: 24084000 ccctccgccgcccctcctcctc 24083979
>gb|AC010649.8| Homo sapiens chromosome 19 clone LLNLR-304C3, complete sequence Length = 37492 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tctccctctccctatcccgacc 298 |||||||||||||||||||||| Sbjct: 4706 tctccctctccctatcccgacc 4685
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 44.1 bits (22), Expect = 1.4 Identities = 52/62 (83%) Strand = Plus / Minus Query: 702 gcacttggagatcgaaaaggaatcaaccgatttgggcattttacggcaccacttgatgag 761 ||||||||||||||| || ||| |||| || || |||||| |||||||||||||||| Sbjct: 241406 gcacttggagatcgacgtggcatccaccgcttcggtcattttgtggcaccacttgatgag 241347 Query: 762 gc 763 || Sbjct: 241346 gc 241345
>ref|XM_426402.2| PREDICTED: Gallus gallus similar to potassium inwardly-rectifying channel J11 (LOC428846), mRNA Length = 1862 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 ggaccggagctggggtcgccttccc 364 ||||||| ||||||||||||||||| Sbjct: 83 ggaccggcgctggggtcgccttccc 107
>emb|CR855057.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0109M01, complete sequence Length = 91447 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 ccagcggcgtcggctctccggtggc 439 ||||||||| ||||||||||||||| Sbjct: 51286 ccagcggcggcggctctccggtggc 51262
>ref|NM_001073313.1| Oryza sativa (japonica cultivar-group) Os12g0485400 (Os12g0485400) mRNA, complete cds Length = 2570 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ccgccgcccctcctcctctct 78 ||||||||||||||||||||| Sbjct: 27 ccgccgcccctcctcctctct 47
>ref|NM_001065766.1| Oryza sativa (japonica cultivar-group) Os07g0230500 (Os07g0230500) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 cctccgccgcccctcctcctc 75 ||||||||||||||||||||| Sbjct: 109 cctccgccgcccctcctcctc 89
>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 cctccgccgcccctcctcctctctc 79 ||||| ||||||||||||||||||| Sbjct: 111715 cctcccccgcccctcctcctctctc 111691
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttggcgagcgtattcgatccg 153 ||||||||||||||||||||| Sbjct: 4557334 ttggcgagcgtattcgatccg 4557354
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ccgtcccgtcgccgcgccgtt 134 ||||||||||||||||||||| Sbjct: 1700260 ccgtcccgtcgccgcgccgtt 1700280
>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23, complete sequence Length = 151359 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ccgtcccgtcgccgcgccgtt 134 ||||||||||||||||||||| Sbjct: 97357 ccgtcccgtcgccgcgccgtt 97377
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ccgccgcccctcctcctctct 78 ||||||||||||||||||||| Sbjct: 17996690 ccgccgcccctcctcctctct 17996710
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ccgtcccgtcgccgcgccgtt 134 ||||||||||||||||||||| Sbjct: 1700260 ccgtcccgtcgccgcgccgtt 1700280
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 cctccgccgcccctcctcctc 75 ||||||||||||||||||||| Sbjct: 7292477 cctccgccgcccctcctcctc 7292497
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 cctccgccgcccctcctcctc 75 ||||||||||||||||||||| Sbjct: 19158 cctccgccgcccctcctcctc 19178
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 cctccgccgcccctcctcctc 75 ||||||||||||||||||||| Sbjct: 132961 cctccgccgcccctcctcctc 132981
>dbj|AK100051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155O14, full insert sequence Length = 2511 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ccgccgcccctcctcctctct 78 ||||||||||||||||||||| Sbjct: 28 ccgccgcccctcctcctctct 48
>dbj|AK100044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K21, full insert sequence Length = 2571 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ccgccgcccctcctcctctct 78 ||||||||||||||||||||| Sbjct: 28 ccgccgcccctcctcctctct 48
>emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-597A11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185605 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1436 agaataaattgatggaaaggaaaat 1460 |||||||| |||||||||||||||| Sbjct: 68344 agaataaaatgatggaaaggaaaat 68368
>emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb0031E19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124294 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ccgccgcccctcctcctctct 78 ||||||||||||||||||||| Sbjct: 89002 ccgccgcccctcctcctctct 88982
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ccgccgcccctcctcctctct 78 ||||||||||||||||||||| Sbjct: 1866 ccgccgcccctcctcctctct 1846
>emb|AJ005069.1|RLAJ5069 Rhizobium leguminosarum insertion sequence ISRle39d Length = 1480 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ttccgtcccgtcgccgcgccg 132 ||||||||||||||||||||| Sbjct: 264 ttccgtcccgtcgccgcgccg 244 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 236,916,803 Number of extensions: 12600046 Number of successful extensions: 283935 Number of sequences better than 10.0: 57 Number of HSP's gapped: 283934 Number of HSP's successfully gapped: 110 Length of query: 1474 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1451 Effective length of database: 18,503,978,556 Effective search space: 26849272884756 Effective search space used: 26849272884756 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
