| Clone Name | FLbaf4d17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P11, full insert sequence Length = 2007 Score = 896 bits (452), Expect = 0.0 Identities = 1030/1220 (84%), Gaps = 2/1220 (0%) Strand = Plus / Plus Query: 368 cctgggcgtgaagccgctgatcgagaagctggagcggcggaacgccaaggaggccagact 427 ||||||||| |||||||| ||||||||||| ||||| || | |||||||||| | | Sbjct: 296 cctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggaggag-gccg 354 Query: 428 ccccg-acgagtccttcatggagcccaccgactccgagtccgacgaggacgacgagcgct 486 | ||| |||| |||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 355 cgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggacgagcgct 414 Query: 487 tctccgacgactccatccaacgccgcgtcgacgagttcgagcgcaagtgccagcgccagt 546 | || ||| ||||| | |||||||||||||||||||||||||||||| | ||||| | Sbjct: 415 acacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaaccgccact 474 Query: 547 ccgagctcctccgctccttcgccgaggccgagacccttgatgatgctcacaagttcatga 606 |||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||| | |||| Sbjct: 475 ccgaactcctacgctccttcgccgaagccgaaacccttgacgatgcccacaaatggatga 534 Query: 607 cgaagattgacaagttcgagcagcgccatctgagcctgccactggagtacagggtcatcg 666 | ||||| |||| |||||| |||||||| ||| || |||||||||||||| ||||||| Sbjct: 535 ccaagatcgacagattcgaggagcgccatttgaagcttccactggagtacagagtcatcg 594 Query: 667 gggacatgatgaaccgcctcaaggatgccactgggaaagagcgcttcatcctcctgcaga 726 | |||||||||||||||||||| |||||||| || || || ||||| | ||||| |||| Sbjct: 595 gcgacatgatgaaccgcctcaaagatgccaccggcaaggaccgctttcttctcctccaga 654 Query: 727 agctgaaccgggccgtcaggctcatggagtgcaaggaggcgtatgaccccagcaaccccg 786 |||| ||||| || || || ||||||| |||| ||| || || || |||||||||||| Sbjct: 655 agcttaaccgagctgttagaatcatggaatgcagggaagcatacgatcccagcaacccct 714 Query: 787 caaacttcggggttatccagcaccagcaggtcgactctccggacgatgtgattgacaacg 846 | || |||||||| ||||| ||||||||||||| ||||||||| ||| | | ||| | Sbjct: 715 ccaatttcggggtcatccaacaccagcaggtcggctctccggaggatcttgtgctcaatg 774 Query: 847 ctggcttcgacaaggagaagcagatgatccagggggagagcctcgatgacgatgaggagg 906 ||||||| |||| |||||||||||||||||| |||| | ||| ||||| || |||| Sbjct: 775 ctggctttgacagggagaagcagatgatccaaggggctggtgacgacgacgacgacgagg 834 Query: 907 agttcaatgaagtcaaggagaaggatgatatgctcatcgagaaactaaatgctattgaga 966 | |||||||||| |||||||||||||||| ||||||| ||||| | ||| |||| || | Sbjct: 835 aattcaatgaagacaaggagaaggatgatctgctcatagagaagttgaattctatcgaaa 894 Query: 967 agaagatcgaggagaagttggcggatctggatcatacgtttggtaagaagggtagggttt 1026 |||||||||||||||| || || || | ||||||||||||||||||||||| || ||| Sbjct: 895 agaagatcgaggagaaattagctgagttagatcatacgtttggtaagaagggcagagttc 954 Query: 1027 tggaagaggaaataaaggatctggtggaggagaggaactccctgacggacaaaaagagga 1086 | || |||||||| |||||||| || || ||| | |||||||| ||||| | ||||||| Sbjct: 955 tagaggaggaaattaaggatcttgttgaagagcgcaactccctcacggagcataagagga 1014 Query: 1087 ggcctatgtacagaaaaggttttgatgtgaaggtcattgacgttaatcggacatgcaaag 1146 | ||||||||||| ||||||||||| || ||||||||||| ||||||||||| || |||| Sbjct: 1015 gacctatgtacaggaaaggttttgacgtcaaggtcattgatgttaatcggacgtgtaaag 1074 Query: 1147 ttacaaagggaggccaaatagcaaaatacacagcgttgttggcaactggaaactaccatg 1206 | ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 1075 tcacaaagggaggccaaatagcaaaattcacagcattgttagcgactggaaactaccatg 1134 Query: 1207 gtgttgtaggttttgcaaaagctaaaggtccaacagcaaagattgcaatacagagggcct 1266 |||||||||| ||||||||||||| |||||| ||||| ||||||||||| || ||||| | Sbjct: 1135 gtgttgtaggatttgcaaaagctagaggtccgacagccaagattgcaattcaaagggctt 1194 Query: 1267 atgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgctc 1326 ||||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 1195 atgagaaatgcttccaggacctccattacatggagcgatatgaggaccacacaattgctc 1254 Query: 1327 atgcgattcaggccaaatacgagaaaacaaagatctacctctggcctggaccaatgagga 1386 |||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| | Sbjct: 1255 atgcaattcaggccaaatatgagaagacaaagatatacctctggcctggaccaatgagaa 1314 Query: 1387 gtgggatgtgtgccgctggcaggactgtcgaaactgtgatgtatctagccgggtttagca 1446 |||| |||| ||| ||||| ||||| || ||||| || ||||| |||| || || |||| Sbjct: 1315 gtggaatgtctgctgctggtaggacggttgaaacagtactgtatttagctggtttcagca 1374 Query: 1447 acgtcaagtcaaagattattggatcgaggagcccgctcaacgttatcaaggctctcttca 1506 |||||||||||||||||||||| || |||| ||| || || |||||||| |||||||||| Sbjct: 1375 acgtcaagtcaaagattattggttcaaggaaccccctgaatgttatcaaagctctcttca 1434 Query: 1507 tagcactaaatgctattgaaacgcccaaggatgtggagcagaagtttggacggactgttg 1566 ||||| |||| || ||||||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 1435 tagcattaaacgccattgaaacgccaaaggatgttgagcagaagtttgggcggaccgtgg 1494 Query: 1567 tggagtcgtacttgttgtag 1586 | ||||| ||||| |||||| Sbjct: 1495 ttgagtcatacttattgtag 1514
>gb|AY106844.1| Zea mays PCO147515 mRNA sequence Length = 1259 Score = 464 bits (234), Expect = e-127 Identities = 673/817 (82%), Gaps = 2/817 (0%) Strand = Plus / Plus Query: 758 caaggaggcgtatgaccccagcaaccccgcaaacttcggggttatccagcaccagcaggt 817 |||||| || || |||||||| ||||| |||||||| ||| | ||||||||||||||||| Sbjct: 8 caaggaagcctacgaccccagtaaccctgcaaactttgggatcatccagcaccagcaggt 67 Query: 818 cgactctccggacgatgtgattgacaacgctggcttcgacaaggagaagcagatgatcca 877 | ||||| || ||||| | ||| || ||||| || |||||||||||||||||||| Sbjct: 68 tggttctcctgaggatgtcgtgctcaatgccggctttgataaggagaagcagatgatcca 127 Query: 878 ggggg-agagcctcgatgacgatgaggaggagttcaatgaagtcaaggagaaggatgata 936 |||| ||| | | || || | || ||||| |||||||| || ||||||| |||||||| Sbjct: 128 aggggcagaactt-gaggatgtcgacgaggaattcaatgatgtgaaggagagggatgata 186 Query: 937 tgctcatcgagaaactaaatgctattgagaagaagatcgaggagaagttggcggatctgg 996 | ||||| || ||||| |||||||||| |||||||| |||| |||| | | ||| Sbjct: 187 ttctcatagataaactcgatgctattgaaaagaagattgaggggaagctagaactgttgg 246 Query: 997 atcatacgtttggtaagaagggtagggttttggaagaggaaataaaggatctggtggagg 1056 ||||||| || |||||||| || || | |||||| |||||||| |||||| ||||||||| Sbjct: 247 atcataccttcggtaagaaaggcagagctttggaggaggaaatcaaggatttggtggagg 306 Query: 1057 agaggaactccctgacggacaaaaagaggaggcctatgtacagaaaaggttttgatgtga 1116 | | || |||||| | | || | ||||| |||||||||||||||||||||||||||| Sbjct: 307 aacgcaattccctgtccnagaagagcaggagacctatgtacagaaaaggttttgatgtga 366 Query: 1117 aggtcattgacgttaatcggacatgcaaagttacaaagggaggccaaatagcaaaataca 1176 | || || || ||||| ||||||||||||| ||||||||||||||||||||||||| || Sbjct: 367 aagttatcgatgttaacaggacatgcaaagtcacaaagggaggccaaatagcaaaattca 426 Query: 1177 cagcgttgttggcaactggaaactaccatggtgttgtaggttttgcaaaagctaaaggtc 1236 ||||| | ||||| |||||||| ||| |||||||||| || || || || |||||||| | Sbjct: 427 cagcgctattggccactggaaattacaatggtgttgttggcttcgctaaggctaaaggcc 486 Query: 1237 caacagcaaagattgcaatacagagggcctatgagaaatgcttccagaacctacattaca 1296 ||||||| ||||||||||||||||| || |||||||||||||||||||| || || |||| Sbjct: 487 caacagccaagattgcaatacagagagcgtatgagaaatgcttccagaatctccactaca 546 Query: 1297 tggagcggtatgaggaacacacaattgctcatgcgattcaggccaaatacgagaaaacaa 1356 ||||||| || ||||| |||||||| |||||||| || ||||||||||| |||||||||| Sbjct: 547 tggagcgatacgaggatcacacaatcgctcatgctatccaggccaaatatgagaaaacaa 606 Query: 1357 agatctacctctggcctggaccaatgaggagtgggatgtgtgccgctggcaggactgtcg 1416 |||| || ||||||||||| |||||||||||||| |||| ||| ||||| |||||||| | Sbjct: 607 agatatatctctggcctgggccaatgaggagtggaatgtctgctgctggtaggactgttg 666 Query: 1417 aaactgtgatgtatctagccgggtttagcaacgtcaagtcaaagattattggatcgagga 1476 | |||||| |||| | || || || ||||| |||||| |||||||||| ||||| |||| Sbjct: 667 agactgtgctgtacttggctggtttcagcaatgtcaagacaaagattatcggatcaagga 726 Query: 1477 gcccgctcaacgttatcaaggctctcttcatagcactaaatgctattgaaacgcccaagg 1536 ||| || || || || || |||||||||||||| | |||||||||||||| || |||| Sbjct: 727 acccacttaatgtgattaaagctctcttcatagctttgaatgctattgaaaccccgaagg 786 Query: 1537 atgtggagcagaagtttggacggactgttgtggagtc 1573 |||| | ||||||||||| || ||||| || ||||| Sbjct: 787 atgtccaacagaagtttgggcgtactgtcgtcgagtc 823
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 281 bits (142), Expect = 5e-72 Identities = 430/526 (81%) Strand = Plus / Minus Query: 579 acccttgatgatgctcacaagttcatgacgaagattgacaagttcgagcagcgccatctg 638 |||||||| ||||| ||||| | ||||| ||||| |||| |||||| |||||||| || Sbjct: 129542 acccttgacgatgcccacaaatggatgaccaagatcgacagattcgaggagcgccatttg 129483 Query: 639 agcctgccactggagtacagggtcatcggggacatgatgaaccgcctcaaggatgccact 698 | || |||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 129482 aagcttccactggagtacagagtcatcggcgacatgatgaaccgcctcaaagatgccacc 129423 Query: 699 gggaaagagcgcttcatcctcctgcagaagctgaaccgggccgtcaggctcatggagtgc 758 || || || ||||| | ||||| |||||||| ||||| || || || ||||||| ||| Sbjct: 129422 ggcaaggaccgctttcttctcctccagaagcttaaccgagctgttagaatcatggaatgc 129363 Query: 759 aaggaggcgtatgaccccagcaaccccgcaaacttcggggttatccagcaccagcaggtc 818 | ||| || || || |||||||||||| | || |||||||| ||||| |||||||||||| Sbjct: 129362 agggaagcatacgatcccagcaacccctccaatttcggggtcatccaacaccagcaggtc 129303 Query: 819 gactctccggacgatgtgattgacaacgctggcttcgacaaggagaagcagatgatccag 878 | ||||||||| ||| | | ||| |||||||| |||| |||||||||||||||||| Sbjct: 129302 ggctctccggaggatcttgtgctcaatgctggctttgacagggagaagcagatgatccaa 129243 Query: 879 ggggagagcctcgatgacgatgaggaggagttcaatgaagtcaaggagaaggatgatatg 938 |||| | ||| ||||| || ||||| |||||||||| |||||||||||||||| || Sbjct: 129242 ggggctggtgacgacgacgacgacgaggaattcaatgaagacaaggagaaggatgatctg 129183 Query: 939 ctcatcgagaaactaaatgctattgagaagaagatcgaggagaagttggcggatctggat 998 ||||| ||||| | ||| |||| || ||||||||||||||||| || || || | ||| Sbjct: 129182 ctcatagagaagttgaattctatcgaaaagaagatcgaggagaaattagctgagttagat 129123 Query: 999 catacgtttggtaagaagggtagggttttggaagaggaaataaaggatctggtggaggag 1058 |||||||||||||||||||| || ||| | || |||||||| |||||||| || || ||| Sbjct: 129122 catacgtttggtaagaagggcagagttctagaggaggaaattaaggatcttgttgaagag 129063 Query: 1059 aggaactccctgacggacaaaaagaggaggcctatgtacagaaaag 1104 | |||||||| ||||| | |||||||| ||||||||||| |||| Sbjct: 129062 cgcaactccctcacggagcataagaggagacctatgtacaggaaag 129017 Score = 141 bits (71), Expect = 1e-29 Identities = 95/103 (92%) Strand = Plus / Minus Query: 1153 agggaggccaaatagcaaaatacacagcgttgttggcaactggaaactaccatggtgttg 1212 ||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||| Sbjct: 128758 agggaggccaaatagcaaaattcacagcattgttagcgactggaaactaccatggtgttg 128699 Query: 1213 taggttttgcaaaagctaaaggtccaacagcaaagattgcaat 1255 |||| ||||||||||||| |||||| ||||| ||||||||||| Sbjct: 128698 taggatttgcaaaagctagaggtccgacagccaagattgcaat 128656 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1266 tatgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgct 1325 |||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||| Sbjct: 128191 tatgagaaatgcttccaggacctccattacatggagcgatatgaggaccacacaattgct 128132 Query: 1326 catgcgattcaggccaaatacgagaaaacaaag 1358 ||||| |||||||||||||| ||||| |||||| Sbjct: 128131 catgcaattcaggccaaatatgagaagacaaag 128099 Score = 115 bits (58), Expect = 6e-22 Identities = 174/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 368 cctgggcgtgaagccgctgatcgagaagctggagcggcggaacgccaaggaggccagact 427 ||||||||| |||||||| ||||||||||| ||||| || | |||||||||| | | Sbjct: 129831 cctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggaggag-gccg 129773 Query: 428 ccccg-acgagtccttcatggagcccaccgactccgagtccgacgaggacgacgagcgct 486 | ||| |||| |||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 129772 cgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggacgagcgct 129713 Query: 487 tctccgacgactccatccaacgccgcgtcgacgagttcgagcgcaagtgccagcgccagt 546 | || ||| ||||| | |||||||||||||||||||||||||||||| | ||||| | Sbjct: 129712 acacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaaccgccact 129653 Query: 547 ccgagctcctccgctccttcgccgaggccg 576 |||| ||||| |||||||||||||| |||| Sbjct: 129652 ccgaactcctacgctccttcgccgaagccg 129623 Score = 89.7 bits (45), Expect = 4e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 1356 aagatctacctctggcctggaccaatgaggagtgggatgtgtgccgctggcaggactgtc 1415 ||||| ||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| || Sbjct: 128007 aagatatacctctggcctggaccaatgagaagtggaatgtctgctgctggtaggacggtt 127948 Query: 1416 gaaactgtgatgtatctagccgggtttagcaacgtcaagtcaaag 1460 ||||| || ||||| |||| || || |||||||||||||||||| Sbjct: 127947 gaaacagtactgtatttagctggtttcagcaacgtcaagtcaaag 127903 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 1521 attgaaacgcccaaggatgtggagcagaagtttggacggactgttgtggagtcgtacttg 1580 ||||||||||| |||||||| |||||||||||||| ||||| || || ||||| ||||| Sbjct: 127637 attgaaacgccaaaggatgttgagcagaagtttgggcggaccgtggttgagtcatactta 127578 Query: 1581 ttgtag 1586 |||||| Sbjct: 127577 ttgtag 127572 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1104 ggttttgatgtgaaggtcattgacgttaatcggacatgcaaagttacaaagg 1155 |||||||| || ||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 128899 ggttttgacgtcaaggtcattgatgttaatcggacgtgtaaagtcacaaagg 128848 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Minus Query: 1459 agattattggatcgaggagcccgctcaacgttatcaaggctctcttcatagcactaaa 1516 |||||||||| || |||| ||| || || |||||||| ||||||||||||||| |||| Sbjct: 127821 agattattggttcaaggaaccccctgaatgttatcaaagctctcttcatagcattaaa 127764
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 281 bits (142), Expect = 5e-72 Identities = 430/526 (81%) Strand = Plus / Minus Query: 579 acccttgatgatgctcacaagttcatgacgaagattgacaagttcgagcagcgccatctg 638 |||||||| ||||| ||||| | ||||| ||||| |||| |||||| |||||||| || Sbjct: 124151 acccttgacgatgcccacaaatggatgaccaagatcgacagattcgaggagcgccatttg 124092 Query: 639 agcctgccactggagtacagggtcatcggggacatgatgaaccgcctcaaggatgccact 698 | || |||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 124091 aagcttccactggagtacagagtcatcggcgacatgatgaaccgcctcaaagatgccacc 124032 Query: 699 gggaaagagcgcttcatcctcctgcagaagctgaaccgggccgtcaggctcatggagtgc 758 || || || ||||| | ||||| |||||||| ||||| || || || ||||||| ||| Sbjct: 124031 ggcaaggaccgctttcttctcctccagaagcttaaccgagctgttagaatcatggaatgc 123972 Query: 759 aaggaggcgtatgaccccagcaaccccgcaaacttcggggttatccagcaccagcaggtc 818 | ||| || || || |||||||||||| | || |||||||| ||||| |||||||||||| Sbjct: 123971 agggaagcatacgatcccagcaacccctccaatttcggggtcatccaacaccagcaggtc 123912 Query: 819 gactctccggacgatgtgattgacaacgctggcttcgacaaggagaagcagatgatccag 878 | ||||||||| ||| | | ||| |||||||| |||| |||||||||||||||||| Sbjct: 123911 ggctctccggaggatcttgtgctcaatgctggctttgacagggagaagcagatgatccaa 123852 Query: 879 ggggagagcctcgatgacgatgaggaggagttcaatgaagtcaaggagaaggatgatatg 938 |||| | ||| ||||| || ||||| |||||||||| |||||||||||||||| || Sbjct: 123851 ggggctggtgacgacgacgacgacgaggaattcaatgaagacaaggagaaggatgatctg 123792 Query: 939 ctcatcgagaaactaaatgctattgagaagaagatcgaggagaagttggcggatctggat 998 ||||| ||||| | ||| |||| || ||||||||||||||||| || || || | ||| Sbjct: 123791 ctcatagagaagttgaattctatcgaaaagaagatcgaggagaaattagctgagttagat 123732 Query: 999 catacgtttggtaagaagggtagggttttggaagaggaaataaaggatctggtggaggag 1058 |||||||||||||||||||| || ||| | || |||||||| |||||||| || || ||| Sbjct: 123731 catacgtttggtaagaagggcagagttctagaggaggaaattaaggatcttgttgaagag 123672 Query: 1059 aggaactccctgacggacaaaaagaggaggcctatgtacagaaaag 1104 | |||||||| ||||| | |||||||| ||||||||||| |||| Sbjct: 123671 cgcaactccctcacggagcataagaggagacctatgtacaggaaag 123626 Score = 141 bits (71), Expect = 1e-29 Identities = 95/103 (92%) Strand = Plus / Minus Query: 1153 agggaggccaaatagcaaaatacacagcgttgttggcaactggaaactaccatggtgttg 1212 ||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||| Sbjct: 123367 agggaggccaaatagcaaaattcacagcattgttagcgactggaaactaccatggtgttg 123308 Query: 1213 taggttttgcaaaagctaaaggtccaacagcaaagattgcaat 1255 |||| ||||||||||||| |||||| ||||| ||||||||||| Sbjct: 123307 taggatttgcaaaagctagaggtccgacagccaagattgcaat 123265 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1266 tatgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgct 1325 |||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||| Sbjct: 122800 tatgagaaatgcttccaggacctccattacatggagcgatatgaggaccacacaattgct 122741 Query: 1326 catgcgattcaggccaaatacgagaaaacaaag 1358 ||||| |||||||||||||| ||||| |||||| Sbjct: 122740 catgcaattcaggccaaatatgagaagacaaag 122708 Score = 115 bits (58), Expect = 6e-22 Identities = 174/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 368 cctgggcgtgaagccgctgatcgagaagctggagcggcggaacgccaaggaggccagact 427 ||||||||| |||||||| ||||||||||| ||||| || | |||||||||| | | Sbjct: 124440 cctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggaggag-gccg 124382 Query: 428 ccccg-acgagtccttcatggagcccaccgactccgagtccgacgaggacgacgagcgct 486 | ||| |||| |||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 124381 cgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggacgagcgct 124322 Query: 487 tctccgacgactccatccaacgccgcgtcgacgagttcgagcgcaagtgccagcgccagt 546 | || ||| ||||| | |||||||||||||||||||||||||||||| | ||||| | Sbjct: 124321 acacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaaccgccact 124262 Query: 547 ccgagctcctccgctccttcgccgaggccg 576 |||| ||||| |||||||||||||| |||| Sbjct: 124261 ccgaactcctacgctccttcgccgaagccg 124232 Score = 89.7 bits (45), Expect = 4e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 1356 aagatctacctctggcctggaccaatgaggagtgggatgtgtgccgctggcaggactgtc 1415 ||||| ||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| || Sbjct: 122616 aagatatacctctggcctggaccaatgagaagtggaatgtctgctgctggtaggacggtt 122557 Query: 1416 gaaactgtgatgtatctagccgggtttagcaacgtcaagtcaaag 1460 ||||| || ||||| |||| || || |||||||||||||||||| Sbjct: 122556 gaaacagtactgtatttagctggtttcagcaacgtcaagtcaaag 122512 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 1521 attgaaacgcccaaggatgtggagcagaagtttggacggactgttgtggagtcgtacttg 1580 ||||||||||| |||||||| |||||||||||||| ||||| || || ||||| ||||| Sbjct: 122246 attgaaacgccaaaggatgttgagcagaagtttgggcggaccgtggttgagtcatactta 122187 Query: 1581 ttgtag 1586 |||||| Sbjct: 122186 ttgtag 122181 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1104 ggttttgatgtgaaggtcattgacgttaatcggacatgcaaagttacaaagg 1155 |||||||| || ||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 123508 ggttttgacgtcaaggtcattgatgttaatcggacgtgtaaagtcacaaagg 123457 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Minus Query: 1459 agattattggatcgaggagcccgctcaacgttatcaaggctctcttcatagcactaaa 1516 |||||||||| || |||| ||| || || |||||||| ||||||||||||||| |||| Sbjct: 122430 agattattggttcaaggaaccccctgaatgttatcaaagctctcttcatagcattaaa 122373
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 281 bits (142), Expect = 5e-72 Identities = 430/526 (81%) Strand = Plus / Minus Query: 579 acccttgatgatgctcacaagttcatgacgaagattgacaagttcgagcagcgccatctg 638 |||||||| ||||| ||||| | ||||| ||||| |||| |||||| |||||||| || Sbjct: 78569 acccttgacgatgcccacaaatggatgaccaagatcgacagattcgaggagcgccatttg 78510 Query: 639 agcctgccactggagtacagggtcatcggggacatgatgaaccgcctcaaggatgccact 698 | || |||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct: 78509 aagcttccactggagtacagagtcatcggcgacatgatgaaccgcctcaaagatgccacc 78450 Query: 699 gggaaagagcgcttcatcctcctgcagaagctgaaccgggccgtcaggctcatggagtgc 758 || || || ||||| | ||||| |||||||| ||||| || || || ||||||| ||| Sbjct: 78449 ggcaaggaccgctttcttctcctccagaagcttaaccgagctgttagaatcatggaatgc 78390 Query: 759 aaggaggcgtatgaccccagcaaccccgcaaacttcggggttatccagcaccagcaggtc 818 | ||| || || || |||||||||||| | || |||||||| ||||| |||||||||||| Sbjct: 78389 agggaagcatacgatcccagcaacccctccaatttcggggtcatccaacaccagcaggtc 78330 Query: 819 gactctccggacgatgtgattgacaacgctggcttcgacaaggagaagcagatgatccag 878 | ||||||||| ||| | | ||| |||||||| |||| |||||||||||||||||| Sbjct: 78329 ggctctccggaggatcttgtgctcaatgctggctttgacagggagaagcagatgatccaa 78270 Query: 879 ggggagagcctcgatgacgatgaggaggagttcaatgaagtcaaggagaaggatgatatg 938 |||| | ||| ||||| || ||||| |||||||||| |||||||||||||||| || Sbjct: 78269 ggggctggtgacgacgacgacgacgaggaattcaatgaagacaaggagaaggatgatctg 78210 Query: 939 ctcatcgagaaactaaatgctattgagaagaagatcgaggagaagttggcggatctggat 998 ||||| ||||| | ||| |||| || ||||||||||||||||| || || || | ||| Sbjct: 78209 ctcatagagaagttgaattctatcgaaaagaagatcgaggagaaattagctgagttagat 78150 Query: 999 catacgtttggtaagaagggtagggttttggaagaggaaataaaggatctggtggaggag 1058 |||||||||||||||||||| || ||| | || |||||||| |||||||| || || ||| Sbjct: 78149 catacgtttggtaagaagggcagagttctagaggaggaaattaaggatcttgttgaagag 78090 Query: 1059 aggaactccctgacggacaaaaagaggaggcctatgtacagaaaag 1104 | |||||||| ||||| | |||||||| ||||||||||| |||| Sbjct: 78089 cgcaactccctcacggagcataagaggagacctatgtacaggaaag 78044 Score = 141 bits (71), Expect = 1e-29 Identities = 95/103 (92%) Strand = Plus / Minus Query: 1153 agggaggccaaatagcaaaatacacagcgttgttggcaactggaaactaccatggtgttg 1212 ||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||| Sbjct: 77785 agggaggccaaatagcaaaattcacagcattgttagcgactggaaactaccatggtgttg 77726 Query: 1213 taggttttgcaaaagctaaaggtccaacagcaaagattgcaat 1255 |||| ||||||||||||| |||||| ||||| ||||||||||| Sbjct: 77725 taggatttgcaaaagctagaggtccgacagccaagattgcaat 77683 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1266 tatgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgct 1325 |||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||| Sbjct: 77218 tatgagaaatgcttccaggacctccattacatggagcgatatgaggaccacacaattgct 77159 Query: 1326 catgcgattcaggccaaatacgagaaaacaaag 1358 ||||| |||||||||||||| ||||| |||||| Sbjct: 77158 catgcaattcaggccaaatatgagaagacaaag 77126 Score = 115 bits (58), Expect = 6e-22 Identities = 174/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 368 cctgggcgtgaagccgctgatcgagaagctggagcggcggaacgccaaggaggccagact 427 ||||||||| |||||||| ||||||||||| ||||| || | |||||||||| | | Sbjct: 78858 cctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggaggag-gccg 78800 Query: 428 ccccg-acgagtccttcatggagcccaccgactccgagtccgacgaggacgacgagcgct 486 | ||| |||| |||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 78799 cgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggacgagcgct 78740 Query: 487 tctccgacgactccatccaacgccgcgtcgacgagttcgagcgcaagtgccagcgccagt 546 | || ||| ||||| | |||||||||||||||||||||||||||||| | ||||| | Sbjct: 78739 acacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaaccgccact 78680 Query: 547 ccgagctcctccgctccttcgccgaggccg 576 |||| ||||| |||||||||||||| |||| Sbjct: 78679 ccgaactcctacgctccttcgccgaagccg 78650 Score = 89.7 bits (45), Expect = 4e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 1356 aagatctacctctggcctggaccaatgaggagtgggatgtgtgccgctggcaggactgtc 1415 ||||| ||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| || Sbjct: 77034 aagatatacctctggcctggaccaatgagaagtggaatgtctgctgctggtaggacggtt 76975 Query: 1416 gaaactgtgatgtatctagccgggtttagcaacgtcaagtcaaag 1460 ||||| || ||||| |||| || || |||||||||||||||||| Sbjct: 76974 gaaacagtactgtatttagctggtttcagcaacgtcaagtcaaag 76930 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 1521 attgaaacgcccaaggatgtggagcagaagtttggacggactgttgtggagtcgtacttg 1580 ||||||||||| |||||||| |||||||||||||| ||||| || || ||||| ||||| Sbjct: 76664 attgaaacgccaaaggatgttgagcagaagtttgggcggaccgtggttgagtcatactta 76605 Query: 1581 ttgtag 1586 |||||| Sbjct: 76604 ttgtag 76599 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1104 ggttttgatgtgaaggtcattgacgttaatcggacatgcaaagttacaaagg 1155 |||||||| || ||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 77926 ggttttgacgtcaaggtcattgatgttaatcggacgtgtaaagtcacaaagg 77875 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Minus Query: 1459 agattattggatcgaggagcccgctcaacgttatcaaggctctcttcatagcactaaa 1516 |||||||||| || |||| ||| || || |||||||| ||||||||||||||| |||| Sbjct: 76848 agattattggttcaaggaaccccctgaatgttatcaaagctctcttcatagcattaaa 76791
>ref|NM_001052132.1| Oryza sativa (japonica cultivar-group) Os02g0102400 (Os02g0102400) mRNA, partial cds Length = 594 Score = 147 bits (74), Expect = 2e-31 Identities = 158/186 (84%) Strand = Plus / Plus Query: 1401 gctggcaggactgtcgaaactgtgatgtatctagccgggtttagcaacgtcaagtcaaag 1460 ||||| ||||| || ||||| || ||||| |||| || || |||||||||||||||||| Sbjct: 6 gctggtaggacggttgaaacagtactgtatttagctggtttcagcaacgtcaagtcaaag 65 Query: 1461 attattggatcgaggagcccgctcaacgttatcaaggctctcttcatagcactaaatgct 1520 |||||||| || |||| ||| || || |||||||| ||||||||||||||| |||| || Sbjct: 66 attattggttcaaggaaccccctgaatgttatcaaagctctcttcatagcattaaacgcc 125 Query: 1521 attgaaacgcccaaggatgtggagcagaagtttggacggactgttgtggagtcgtacttg 1580 ||||||||||| |||||||| |||||||||||||| ||||| || || ||||| ||||| Sbjct: 126 attgaaacgccaaaggatgttgagcagaagtttgggcggaccgtggttgagtcatactta 185 Query: 1581 ttgtag 1586 |||||| Sbjct: 186 ttgtag 191
>dbj|AK059054.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F01, full insert sequence Length = 594 Score = 147 bits (74), Expect = 2e-31 Identities = 158/186 (84%) Strand = Plus / Plus Query: 1401 gctggcaggactgtcgaaactgtgatgtatctagccgggtttagcaacgtcaagtcaaag 1460 ||||| ||||| || ||||| || ||||| |||| || || |||||||||||||||||| Sbjct: 6 gctggtaggacggttgaaacagtactgtatttagctggtttcagcaacgtcaagtcaaag 65 Query: 1461 attattggatcgaggagcccgctcaacgttatcaaggctctcttcatagcactaaatgct 1520 |||||||| || |||| ||| || || |||||||| ||||||||||||||| |||| || Sbjct: 66 attattggttcaaggaaccccctgaatgttatcaaagctctcttcatagcattaaacgcc 125 Query: 1521 attgaaacgcccaaggatgtggagcagaagtttggacggactgttgtggagtcgtacttg 1580 ||||||||||| |||||||| |||||||||||||| ||||| || || ||||| ||||| Sbjct: 126 attgaaacgccaaaggatgttgagcagaagtttgggcggaccgtggttgagtcatactta 185 Query: 1581 ttgtag 1586 |||||| Sbjct: 186 ttgtag 191
>gb|AY024057.1| Oryza sativa microsatellite MRG6382 containing (GAAG)X6, genomic sequence Length = 224 Score = 91.7 bits (46), Expect = 9e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 507 cgccgcgtcgacgagttcgagcgcaagtgccagcgccagtccgagctcctccgctccttc 566 |||||||||||||||||||||||||||||| | ||||| ||||| ||||| ||||||||| Sbjct: 211 cgccgcgtcgacgagttcgagcgcaagtgcaaccgccactccgaactcctacgctccttc 152 Query: 567 gccgaggccg 576 ||||| |||| Sbjct: 151 gccgaagccg 142
>ref|NM_105162.2| Arabidopsis thaliana structural constituent of ribosome (AT1G64880) mRNA, complete cds Length = 1985 Score = 61.9 bits (31), Expect = 8e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 1250 tgcaatacagagggcctatgagaaatgcttccagaacctacattacatggagcggtatga 1309 |||||| |||| ||| |||||||||||||| ||||| || |||||| | |||||| |||| Sbjct: 1286 tgcaatgcagaaggcatatgagaaatgctttcagaatcttcattacgtagagcggcatga 1345 Query: 1310 ggaacacacaattgc 1324 ||| ||||| ||||| Sbjct: 1346 ggagcacaccattgc 1360
>gb|BT014967.1| Arabidopsis thaliana At1g64880 gene, complete cds Length = 1548 Score = 61.9 bits (31), Expect = 8e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 1250 tgcaatacagagggcctatgagaaatgcttccagaacctacattacatggagcggtatga 1309 |||||| |||| ||| |||||||||||||| ||||| || |||||| | |||||| |||| Sbjct: 1215 tgcaatgcagaaggcatatgagaaatgctttcagaatcttcattacgtagagcggcatga 1274 Query: 1310 ggaacacacaattgc 1324 ||| ||||| ||||| Sbjct: 1275 ggagcacaccattgc 1289
>gb|AY035120.1| Arabidopsis thaliana unknown protein (At1g64880) mRNA, complete cds Length = 1935 Score = 61.9 bits (31), Expect = 8e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 1250 tgcaatacagagggcctatgagaaatgcttccagaacctacattacatggagcggtatga 1309 |||||| |||| ||| |||||||||||||| ||||| || |||||| | |||||| |||| Sbjct: 1285 tgcaatgcagaaggcatatgagaaatgctttcagaatcttcattacgtagagcggcatga 1344 Query: 1310 ggaacacacaattgc 1324 ||| ||||| ||||| Sbjct: 1345 ggagcacaccattgc 1359
>gb|AC006193.3|AC006193 Arabidopsis thaliana chromosome I BAC F13O11 genomic sequence, complete sequence Length = 118335 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1266 tatgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgc 1324 |||||||||||||| ||||| || |||||| | |||||| ||||||| ||||| ||||| Sbjct: 71635 tatgagaaatgctttcagaatcttcattacgtagagcggcatgaggagcacaccattgc 71693
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence Length = 93864 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1204 atggtgttgtaggttttgcaaaagctaaagg 1234 |||||||||| |||||||||||||| ||||| Sbjct: 91970 atggtgttgttggttttgcaaaagccaaagg 91940 Score = 42.1 bits (21), Expect = 7.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 1266 tatgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgct 1325 |||||||| ||||| ||||| ||||||| || ||||| | ||||| ||||||||||| Sbjct: 90629 tatgagaagtgctttcagaatttacattatatagagcgacacgaggagcacacaattgcg 90570 Query: 1326 catgc 1330 ||||| Sbjct: 90569 catgc 90565
>ref|NM_201287.1| Danio rerio aminolevulinate, delta-, synthetase 1 (alas1), mRNA gb|BC054574.1| Danio rerio aminolevulinate, delta-, synthetase 1, mRNA (cDNA clone MGC:63935 IMAGE:6791081), complete cds Length = 2186 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 961 ttgagaagaagatcgaggagaag 983 ||||||||||||||||||||||| Sbjct: 658 ttgagaagaagatcgaggagaag 680
>dbj|AP006644.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06I23, TM0253, complete sequence Length = 85813 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1204 atggtgttgtaggttttgcaaaagctaaagg 1234 |||||||||| |||||||||||||| ||||| Sbjct: 27847 atggtgttgtgggttttgcaaaagccaaagg 27817
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 46.1 bits (23), Expect = 0.49 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1204 atggtgttgtaggttttgcaaaagctaaagg 1234 |||||||||| |||||||||||||| ||||| Sbjct: 14092 atggtgttgttggttttgcaaaagccaaagg 14062 Score = 42.1 bits (21), Expect = 7.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 1266 tatgagaaatgcttccagaacctacattacatggagcggtatgaggaacacacaattgct 1325 |||||||| ||||| ||||| ||||||| || ||||| | ||||| ||||||||||| Sbjct: 12751 tatgagaagtgctttcagaatttacattatatagagcgacacgaggagcacacaattgcg 12692 Query: 1326 catgc 1330 ||||| Sbjct: 12691 catgc 12687
>gb|AC191838.4| Rhesus Macaque BAC CH250-455J20 () complete sequence Length = 143841 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 cgcgccccagcgccgccacctc 176 |||||||||||||||||||||| Sbjct: 20688 cgcgccccagcgccgccacctc 20709
>ref|XM_426589.2| PREDICTED: Gallus gallus similar to MGC53048 protein (LOC429032), mRNA Length = 1077 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 ctgctggcccagctggagcggg 282 |||||||||||||||||||||| Sbjct: 25 ctgctggcccagctggagcggg 46
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 275 ggagcgggagcggcagaaggaccgcgagga 304 ||||||| ||||||||||||| |||||||| Sbjct: 657613 ggagcggcagcggcagaaggagcgcgagga 657584
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 ccgagtccgacgaggacgacgagcgc 485 |||||||||||||||||| ||||||| Sbjct: 5532249 ccgagtccgacgaggacggcgagcgc 5532224
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 275 ggagcgggagcggcagaaggaccgcgagga 304 ||||||| ||||||||||||| |||||||| Sbjct: 644792 ggagcggcagcggcagaaggagcgcgagga 644763
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 tcatccacgacctgctggccca 271 |||||||||||||||||||||| Sbjct: 362861 tcatccacgacctgctggccca 362882
>ref|XM_370152.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06649.4) partial mRNA Length = 3876 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 tgaagccgctgatcgagaagct 397 |||||||||||||||||||||| Sbjct: 1931 tgaagccgctgatcgagaagct 1952
>ref|NM_116612.1| Arabidopsis thaliana unknown protein (AT4G03740) mRNA, complete cds Length = 1038 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cttctccgacgactccatccaa 506 |||||||||||||||||||||| Sbjct: 40 cttctccgacgactccatccaa 61
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete sequence Length = 116448 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cttctccgacgactccatccaa 506 |||||||||||||||||||||| Sbjct: 102916 cttctccgacgactccatccaa 102895
>ref|XM_386994.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06818.1) partial mRNA Length = 720 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 962 tgagaagaagatcgaggagaag 983 |||||||||||||||||||||| Sbjct: 381 tgagaagaagatcgaggagaag 402
>gb|BC052653.1| Mus musculus GATA binding protein 1, mRNA (cDNA clone MGC:60652 IMAGE:30039400), complete cds Length = 1894 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gctggagcgggagcggcagaaggacc 297 ||||||||||||||||| |||||||| Sbjct: 1094 gctggagcgggagcggctgaaggacc 1119
>dbj|AK146915.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920074C13 product:GATA binding protein 1, full insert sequence Length = 1881 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gctggagcgggagcggcagaaggacc 297 ||||||||||||||||| |||||||| Sbjct: 1112 gctggagcgggagcggctgaaggacc 1137
>emb|AL392145.1|ATT4C12 Arabidopsis thaliana DNA chromosome 5, BAC clone T4C12 (ESSA project) Length = 87871 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cttctccgacgactccatccaa 506 |||||||||||||||||||||| Sbjct: 39347 cttctccgacgactccatccaa 39368
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9 Length = 159629 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 485 cttctccgacgactccatccaa 506 |||||||||||||||||||||| Sbjct: 124194 cttctccgacgactccatccaa 124173
>emb|AJ009798.1|SRE9798 Streptomyces reticuli cebR gene Length = 1146 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 cgacctgctggcccagctggag 278 |||||||||||||||||||||| Sbjct: 522 cgacctgctggcccagctggag 543
>emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in linkage group 23, complete sequence Length = 158509 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1711 aactagtatttgtttgtcctgc 1732 |||||||||||||||||||||| Sbjct: 129096 aactagtatttgtttgtcctgc 129075
>emb|X95967.1|PCINTGNSP Phaseolus coccineus intergenic spacer ribosomal DNA Length = 4684 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 580 cccttgatgatgctcacaagtt 601 |||||||||||||||||||||| Sbjct: 3044 cccttgatgatgctcacaagtt 3023
>emb|AL670169.9| Mouse DNA sequence from clone RP23-198C2 on chromosome X, complete sequence Length = 151698 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 272 gctggagcgggagcggcagaaggacc 297 ||||||||||||||||| |||||||| Sbjct: 62110 gctggagcgggagcggctgaaggacc 62085
>ref|NM_008089.1| Mus musculus GATA binding protein 1 (Gata1), mRNA emb|X15763.1|MMGF1 Mouse mRNA for DNA-binding protein GF-1 Length = 1807 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gctggagcgggagcggcagaaggacc 297 ||||||||||||||||| |||||||| Sbjct: 1032 gctggagcgggagcggctgaaggacc 1057
>ref|NM_001073610.1| Oryza sativa (japonica cultivar-group) Os12g0570300 (Os12g0570300) mRNA, complete cds Length = 876 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 ccgactccgagtccgacgagg 474 ||||||||||||||||||||| Sbjct: 611 ccgactccgagtccgacgagg 631
>ref|NM_001074539.1| Oryza sativa (japonica cultivar-group) Os11g0529800 (Os11g0529800) mRNA, complete cds Length = 1206 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 cgcgccccagcgccgccacctcgcc 179 ||||| ||||||||||||||||||| Sbjct: 805 cgcgcaccagcgccgccacctcgcc 781
>ref|XM_517550.2| PREDICTED: Pan troglodytes inhibitor of growth family, member 1-like (ING2), mRNA Length = 1414 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 187 cgtcgccgccgcctccgcatccagc 163
>ref|XM_396366.3| PREDICTED: Apis mellifera similar to CG4733-PA (LOC412914), mRNA Length = 3864 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 888 ctcgatgacgatgaggaggag 908 ||||||||||||||||||||| Sbjct: 89 ctcgatgacgatgaggaggag 69
>ref|XM_001093372.1| PREDICTED: Macaca mulatta similar to inhibitor of growth family, member 1-like (LOC701839), mRNA Length = 1529 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 308 cgtcgccgccgcctccgcatccagc 284
>ref|NM_001564.2| Homo sapiens inhibitor of growth family, member 2 (ING2), mRNA Length = 1135 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 114 cgtcgccgccgcctccgcatccagc 90
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 790 acttcggggttatccagcaccagca 814 ||||||| ||||||||||||||||| Sbjct: 186356 acttcggcgttatccagcaccagca 186332
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 510 cgcgtcgacgagttcgagcgc 530 ||||||||||||||||||||| Sbjct: 2607821 cgcgtcgacgagttcgagcgc 2607841
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 cgcgccccagcgccgccacctcgcc 179 ||||||| ||||||||||||||||| Sbjct: 19053 cgcgcccgagcgccgccacctcgcc 19077
>gb|AC121500.6| Mus musculus chromosome 5, clone RP23-471H10, complete sequence Length = 179337 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1961 gaaagaataaaaaccctttctctct 1985 ||||||||||||||||| ||||||| Sbjct: 110471 gaaagaataaaaaccctgtctctct 110495
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 cgcgccccagcgccgccacctcgcc 179 ||||| ||||||||||||||||||| Sbjct: 151349 cgcgcaccagcgccgccacctcgcc 151325
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 cgcgccccagcgccgccacctcgcc 179 ||||||| ||||||||||||||||| Sbjct: 83043 cgcgcccgagcgccgccacctcgcc 83067
>gb|AC102392.8| Mus musculus chromosome 3, clone RP24-122I22, complete sequence Length = 201067 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ccggcgccggcgagggagggg 222 ||||||||||||||||||||| Sbjct: 93783 ccggcgccggcgagggagggg 93763
>gb|AC113203.10| Mus musculus chromosome 5, clone RP23-276C23, complete sequence Length = 201674 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1961 gaaagaataaaaaccctttctctct 1985 ||||||||||||||||| ||||||| Sbjct: 193845 gaaagaataaaaaccctgtctctct 193821
>gb|AC107214.5| Homo sapiens BAC clone RP11-367N14 from 4, complete sequence Length = 183317 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 40108 cgtcgccgccgcctccgcatccagc 40084
>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland Research Institute) complete sequence Length = 217001 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1263 gcctatgagaaatgcttccag 1283 ||||||||||||||||||||| Sbjct: 66316 gcctatgagaaatgcttccag 66296
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1748 aaccgggtactgtaatatttc 1768 ||||||||||||||||||||| Sbjct: 277262 aaccgggtactgtaatatttc 277242
>gb|DQ374152.1| Papaya ringspot virus isolate PRSV-W-C, complete genome Length = 10326 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 954 aatgctattgagaagaagatc 974 ||||||||||||||||||||| Sbjct: 4865 aatgctattgagaagaagatc 4885
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 ccgactccgagtccgacgagg 474 ||||||||||||||||||||| Sbjct: 23518716 ccgactccgagtccgacgagg 23518696
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 cgcgccccagcgccgccacctcgcc 179 ||||| ||||||||||||||||||| Sbjct: 18572034 cgcgcaccagcgccgccacctcgcc 18572010
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 cgcgccccagcgccgccacctcgcc 179 ||||||| ||||||||||||||||| Sbjct: 19299827 cgcgcccgagcgccgccacctcgcc 19299851
>emb|AL049766.14|HSDJ686N3 Human DNA sequence from clone RP4-686N3 on chromosome 20q13.2-13.2 Contains the 3' end of the DDX27 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 27, the KIAA1404 gene, a novel gene and two CpG islands, complete sequence Length = 110293 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1965 gaataaaaaccctttctctct 1985 ||||||||||||||||||||| Sbjct: 58509 gaataaaaaccctttctctct 58489
>gb|AF053537.1|AF053537 Homo sapiens p33 (ING2) mRNA, complete cds Length = 1080 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 52 cgtcgccgccgcctccgcatccagc 28
>emb|AL807372.1|NCB23E9 Neurospora crassa DNA linkage group II BAC clone B23E9 Length = 64710 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 963 gagaagaagatcgaggagaag 983 ||||||||||||||||||||| Sbjct: 47084 gagaagaagatcgaggagaag 47104
>emb|CR936805.1| Homo sapiens mRNA; cDNA DKFZp781G098 (from clone DKFZp781G098) Length = 8645 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1965 gaataaaaaccctttctctct 1985 ||||||||||||||||||||| Sbjct: 625 gaataaaaaccctttctctct 605
>emb|BX640522.13| Zebrafish DNA sequence from clone CH211-257O19 in linkage group 15, complete sequence Length = 154564 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1049 ggtggaggagaggaactccctgacg 1073 |||||||||||| |||||||||||| Sbjct: 104050 ggtggaggagagaaactccctgacg 104074
>gb|AF208002.1|AF208002 Diabrotica virgifera virgifera alpha-amylase mRNA, complete cds Length = 1552 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1024 ttttggaagaggaaataaagg 1044 ||||||||||||||||||||| Sbjct: 1254 ttttggaagaggaaataaagg 1274
>gb|AF062747.1|HSING2S1 Homo sapiens p33 (ING2) gene, exon 1, complete sequence Length = 423 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 52 cgtcgccgccgcctccgcatccagc 28
>ref|XM_951371.1| Neurospora crassa OR74A hypothetical protein (NCU03355.1) partial mRNA Length = 2532 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 963 gagaagaagatcgaggagaag 983 ||||||||||||||||||||| Sbjct: 2209 gagaagaagatcgaggagaag 2229
>dbj|AK108513.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-A07, full insert sequence Length = 876 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 ccgactccgagtccgacgagg 474 ||||||||||||||||||||| Sbjct: 611 ccgactccgagtccgacgagg 631
>gb|BC030128.2| Homo sapiens inhibitor of growth family, member 2, mRNA (cDNA clone MGC:10524 IMAGE:3941655), complete cds Length = 1132 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 111 cgtcgccgccgcctccgcatccagc 87
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 260 cctgctggcccagctggagcgggag 284 |||||||||||||| |||||||||| Sbjct: 1878923 cctgctggcccagcgggagcgggag 1878899
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 gccccagcgccgccacctcgc 178 ||||||||||||||||||||| Sbjct: 2260624 gccccagcgccgccacctcgc 2260644
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 ccgactccgagtccgacgagg 474 ||||||||||||||||||||| Sbjct: 39264 ccgactccgagtccgacgagg 39244
>gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complete sequence Length = 216389 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1806 atgatatgtacttggcaaatagaat 1830 |||| |||||||||||||||||||| Sbjct: 79307 atgacatgtacttggcaaatagaat 79331
>gb|AC140674.4| Mus musculus BAC clone RP23-368L9 from 3, complete sequence Length = 212854 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ccggcgccggcgagggagggg 222 ||||||||||||||||||||| Sbjct: 74088 ccggcgccggcgagggagggg 74068
>dbj|AB012853.1| Homo sapiens ING1L mRNA for ING1Lp, complete cds Length = 1078 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgtcgccgccgcatccgcatccagc 125 |||||||||||| |||||||||||| Sbjct: 76 cgtcgccgccgcctccgcatccagc 52 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 313,214,226 Number of extensions: 17784386 Number of successful extensions: 104342 Number of sequences better than 10.0: 72 Number of HSP's gapped: 104338 Number of HSP's successfully gapped: 109 Length of query: 2010 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1987 Effective length of database: 18,503,978,556 Effective search space: 36767405390772 Effective search space used: 36767405390772 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)