ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6n19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099393:Os10g0502400 | 35 | 0.018 | 2 | AK062231:Os10g0502400 | 35 | 0.018 | 3 | AB011416:Os10g0502400 | 35 | 0.018 | 4 | AK063483:Os11g0245500 | 31 | 0.25 | 5 | AK106216:Os02g0822000 | 29 | 0.74 | 6 | AK071390:Os02g0822000 | 29 | 0.74 | 7 | AK062205:Os02g0822000 | 29 | 0.74 | 8 | AK061760:Os02g0822000 | 29 | 0.74 | 9 | AK110145:Os09g0535200 | 28 | 2.1 | 10 | Os01g0370900:Os01g0370900 | 27 | 4.8 | 11 | AK064012: | 27 | 4.8 | 12 | AK103199:Os01g0180000 | 27 | 4.8 | 13 | AK102782:Os01g0103800 | 27 | 4.8 | 14 | AK120574:Os10g0565000 | 26 | 6.3 | 15 | AK112095:Os03g0112700 | 26 | 6.3 |
|---|
>AK099393:Os10g0502400 | Length = 537 Score = 34.7 bits (78), Expect = 0.018 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKA++EQKIKAKVEK+Q+ Sbjct: 519 TEKAIIEQKIKAKVEKSQN 537
>AK062231:Os10g0502400 | Length = 272 Score = 34.7 bits (78), Expect = 0.018 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKA++EQKIKAKVEK+Q+ Sbjct: 254 TEKAIIEQKIKAKVEKSQN 272
>AB011416:Os10g0502400 | Length = 537 Score = 34.7 bits (78), Expect = 0.018 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKA++EQKIKAKVEK+Q+ Sbjct: 519 TEKAIIEQKIKAKVEKSQN 537
>AK063483:Os11g0245500 | Length = 270 Score = 30.8 bits (68), Expect = 0.25 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +3 Query: 42 VEKTQS*GPGDGPPFCISTYTTPPPRMSLHSIYPSIPFCPYLLLSSSHSKCVVEI 206 VEK + GDGPP C+ TY + P+ + P +S +SK V+ I Sbjct: 200 VEKLDAGDGGDGPPCCVVTYVV--------QLDPAAGWLPRCFVSRLNSKLVIMI 246
>AK106216:Os02g0822000 | Length = 327 Score = 29.3 bits (64), Expect = 0.74 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 105 TPPPRMSLHSIYPSIPFCPY--LLLSSSHSKCVVEIEEQRSMFAPELP 242 TPPP S+H PS P PY LL S ++SK E Q PE P Sbjct: 66 TPPPE-SVHLTTPSSPEVPYAKLLTSINNSKNAETGELQSYQIYPESP 112
>AK071390:Os02g0822000 | Length = 428 Score = 29.3 bits (64), Expect = 0.74 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 105 TPPPRMSLHSIYPSIPFCPY--LLLSSSHSKCVVEIEEQRSMFAPELP 242 TPPP S+H PS P PY LL S ++SK E Q PE P Sbjct: 167 TPPPE-SVHLTTPSSPEVPYAKLLTSINNSKNAETGELQSYQIYPESP 213
>AK062205:Os02g0822000 | Length = 428 Score = 29.3 bits (64), Expect = 0.74 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 105 TPPPRMSLHSIYPSIPFCPY--LLLSSSHSKCVVEIEEQRSMFAPELP 242 TPPP S+H PS P PY LL S ++SK E Q PE P Sbjct: 167 TPPPE-SVHLTTPSSPEVPYAKLLTSINNSKNAETGELQSYQIYPESP 213
>AK061760:Os02g0822000 | Length = 327 Score = 29.3 bits (64), Expect = 0.74 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +3 Query: 105 TPPPRMSLHSIYPSIPFCPY--LLLSSSHSKCVVEIEEQRSMFAPELP 242 TPPP S+H PS P PY LL S ++SK E Q PE P Sbjct: 66 TPPPE-SVHLTTPSSPEVPYAKLLTSINNSKNAETGELQSYQIYPESP 112
>AK110145:Os09g0535200 | Length = 861 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 66 PGDGPPFCISTYTTPPPRMSLHSIYPSIPFCPYLLLS-SSHSKCV-VEIEEQRSMFAPEL 239 P PP TPP S S P +P P L + + H + + V + R+ AP Sbjct: 540 PATAPPMIAPPVATPPDSASSPSTVPRMPSAPLALRALAPHLRALRVSVPHPRASSAPAP 599 Query: 240 P 242 P Sbjct: 600 P 600
>Os01g0370900:Os01g0370900 | Length = 220 Score = 26.6 bits (57), Expect = 4.8 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = -3 Query: 364 FFASINTLIYSCLFRPTEYYIVQLEKLGSN 275 ++ I++++Y CLF P Y + +K+ N Sbjct: 109 YYPVISSIVYECLFNPAMYGVPTNQKVVDN 138
>AK064012: | Length = 459 Score = 26.6 bits (57), Expect = 4.8 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 11 GGPRAEDQGQGREDPKLRTRRRSSVLY 91 G + DQG+G E P R RRR++ L+ Sbjct: 382 GAEQPGDQGRGGEGPGGRRRRRAAALH 408
>AK103199:Os01g0180000 | Length = 520 Score = 26.6 bits (57), Expect = 4.8 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = +3 Query: 66 PGDGPPFCISTY-TTPPPRMSLHSIYPSIPFCPY 164 PG PP Y + PPP + HS +P I PY Sbjct: 478 PGPWPPVHGVPYGSPPPPPLQHHSSWPPIHSVPY 511
>AK102782:Os01g0103800 | Length = 509 Score = 26.6 bits (57), Expect = 4.8 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 10/47 (21%) Frame = +3 Query: 81 PFCISTYTT--------PPPRMSLHSIYPSIPFCPY--LLLSSSHSK 191 P STYTT PPP ++ H+ PS P PY LLSS K Sbjct: 145 PPVFSTYTTEPSTAPLTPPPELA-HATTPSSPDVPYARFLLSSMDLK 190
>AK120574:Os10g0565000 | Length = 467 Score = 26.2 bits (56), Expect = 6.3 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = +3 Query: 72 DGPPFCISTYTTPPPRMSLH---SIYPSIPFCPY---LLLSSSHSKCVVEIEEQRSMFAP 233 D PP + PPP + +H S + ++P P+ ++ SSS S S FAP Sbjct: 23 DPPPSSDPNHLGPPPALRIHIPSSPHHALPSTPHKRPVMTSSSASSTPTRPSPSPSPFAP 82
>AK112095:Os03g0112700 | Length = 707 Score = 26.2 bits (56), Expect = 6.3 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 9/65 (13%) Frame = +3 Query: 78 PPFCISTYTTPPPRMSLHSI---------YPSIPFCPYLLLSSSHSKCVVEIEEQRSMFA 230 PP S +P R L S YPS P P + S HSK + E Sbjct: 106 PPISGSKEISPQSRTILESSPDNQDNGHEYPSPPPIPESIELSPHSKALPESSPDNQDIE 165 Query: 231 PELPA 245 PE P+ Sbjct: 166 PECPS 170 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 12,490,709 Number of extensions: 317582 Number of successful extensions: 777 Number of sequences better than 10.0: 15 Number of HSP's gapped: 777 Number of HSP's successfully gapped: 15 Length of query: 125 Length of database: 15,399,855 Length adjustment: 88 Effective length of query: 37 Effective length of database: 11,876,247 Effective search space: 439421139 Effective search space used: 439421139 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
