| No. |
Definition |
Score (bits) |
E Value |
1 | LOC_Os10g35840:12010.t02874:unspliced-genomic glutamyl-tRNA ... |
39 |
0.001 |
2 | LOC_Os02g29980:12002.t02691:unspliced-genomic glucan endo-1,... |
37 |
0.069 |
3 | LOC_Os02g07490:12002.t00646:unspliced-genomic glyceraldehyde... |
29 |
0.20 |
4 | LOC_Os01g13160:12001.t01179:unspliced-genomic expressed protein |
30 |
0.31 |
5 | LOC_Os03g48000:12003.t04161:unspliced-genomic GMN10, putativ... |
35 |
0.34 |
6 | LOC_Os09g37200:12009.t03194:unspliced-genomic agmatine couma... |
28 |
0.40 |
7 | LOC_Os04g28074:12004.t02507:unspliced-genomic hypothetical p... |
34 |
0.46 |
8 | LOC_Os01g14110:12001.t01270:unspliced-genomic expressed protein |
30 |
0.57 |
9 | LOC_Os11g07090:12011.t00600:unspliced-genomic pectinesterase... |
33 |
0.87 |
10 | LOC_Os01g63490:12001.t05718:unspliced-genomic hypothetical p... |
33 |
1.2 |
11 | LOC_Os08g36840:12008.t03423:unspliced-genomic glycoprotein 3... |
33 |
1.2 |
12 | LOC_Os01g43390:12001.t03855:unspliced-genomic uroporphyrinog... |
25 |
1.2 |
13 | LOC_Os07g47950:12007.t04429:unspliced-genomic protein kinase... |
30 |
2.2 |
14 | LOC_Os10g01044:12010.t00004:unspliced-genomic tic62 protein,... |
32 |
2.3 |
15 | LOC_Os07g38270:12007.t03493:unspliced-genomic insulin-degrad... |
32 |
2.3 |
16 | LOC_Os12g16540:12012.t01507:unspliced-genomic OsWAK124 - OsW... |
24 |
2.3 |
17 | LOC_Os09g08680:12009.t00662:unspliced-genomic expressed protein |
31 |
3.1 |
18 | LOC_Os07g27000:12007.t02395:unspliced-genomic retrotransposo... |
31 |
3.1 |
19 | LOC_Os06g20590:12006.t01876:unspliced-genomic retrotransposo... |
31 |
3.1 |
20 | LOC_Os06g09210:12006.t00800:unspliced-genomic cytochrome P45... |
31 |
3.1 |
21 | LOC_Os12g41980:12012.t03874:unspliced-genomic triacylglycero... |
24 |
3.2 |
22 | LOC_Os02g32290:12002.t02872:unspliced-genomic expressed protein |
24 |
4.0 |
23 | LOC_Os09g16290:12009.t01416:unspliced-genomic ABC transporte... |
31 |
4.3 |
24 | LOC_Os07g37610:12007.t03430:unspliced-genomic HSI2, putative... |
31 |
4.3 |
25 | LOC_Os06g45070:12006.t04194:unspliced-genomic diphthamide bi... |
31 |
4.3 |
26 | LOC_Os06g14800:12006.t01355:unspliced-genomic hypothetical p... |
31 |
4.3 |
27 | LOC_Os05g04380:12005.t00334:unspliced-genomic peroxidase 1 p... |
31 |
4.3 |
28 | LOC_Os01g11850:12001.t01055:unspliced-genomic hypothetical p... |
31 |
4.3 |
29 | LOC_Os10g42510:12010.t03477:unspliced-genomic expressed protein |
31 |
4.3 |
30 | LOC_Os04g12160:12004.t01040:unspliced-genomic aspartic prote... |
31 |
4.3 |
31 | LOC_Os06g10680:12006.t00946:unspliced-genomic hypothetical p... |
24 |
4.4 |
32 | LOC_Os10g36430:12010.t02925:unspliced-genomic retrotransposo... |
27 |
4.9 |
33 | LOC_Os04g26834:12004.t02389:unspliced-genomic pepsin A, puta... |
27 |
5.0 |
34 | LOC_Os03g59310:12003.t05178:unspliced-genomic 40S ribosomal ... |
24 |
5.7 |
35 | LOC_Os08g01980:12008.t00097:unspliced-genomic expressed protein |
27 |
5.7 |
36 | LOC_Os08g43410:12008.t04066:unspliced-genomic SHI, putative,... |
25 |
5.7 |
37 | LOC_Os01g34470:12001.t03005:unspliced-genomic hypothetical p... |
25 |
5.8 |
38 | LOC_Os12g17560:12012.t01608:unspliced-genomic hypothetical p... |
30 |
5.9 |
39 | LOC_Os07g27359:12007.t004637:unspliced-genomic expressed pro... |
30 |
5.9 |
40 | LOC_Os05g35060:12005.t03099:unspliced-genomic non-imprinted ... |
30 |
5.9 |
41 | LOC_Os04g41820:12004.t03737:unspliced-genomic transcription ... |
30 |
5.9 |
42 | LOC_Os03g15800:12003.t01366:unspliced-genomic BTB/POZ, putat... |
30 |
5.9 |
43 | LOC_Os02g58590:12002.t05429:unspliced-genomic N-acetylglucos... |
30 |
5.9 |
44 | LOC_Os01g47200:12001.t04168:unspliced-genomic expressed protein |
30 |
5.9 |
45 | LOC_Os01g32120:12001.t02791:unspliced-genomic calmodulin, pu... |
30 |
5.9 |
46 | LOC_Os12g36620:12012.t03343:unspliced-genomic pentatricopept... |
30 |
5.9 |
47 | LOC_Os05g18060:12005.t01575:unspliced-genomic retrotransposo... |
30 |
5.9 |
48 | LOC_Os05g18050:12005.t01574:unspliced-genomic retrotransposo... |
30 |
5.9 |
49 | LOC_Os02g08140:12002.t00710:unspliced-genomic CIPK-like prot... |
30 |
5.9 |
50 | LOC_Os02g08130:12002.t00709:unspliced-genomic carbohydrate k... |
30 |
5.9 |
51 | LOC_Os01g02320:12001.t00127:unspliced-genomic TAK14, putativ... |
30 |
5.9 |
52 | LOC_Os01g09140:12001.t00791:unspliced-genomic hypothetical p... |
25 |
6.2 |
53 | LOC_Os03g11710:12003.t00972:unspliced-genomic expressed protein |
26 |
8.0 |
54 | LOC_Os12g39560:12012.t03635:unspliced-genomic hypothetical p... |
30 |
8.1 |
55 | LOC_Os12g37860:12012.t03467:unspliced-genomic expressed protein |
30 |
8.1 |
56 | LOC_Os12g13390:12012.t01207:unspliced-genomic aspartyl amino... |
30 |
8.1 |
57 | LOC_Os11g14070:12011.t01240:unspliced-genomic expressed protein |
30 |
8.1 |
58 | LOC_Os09g33450:12009.t02920:unspliced-genomic palmitoyltrans... |
30 |
8.1 |
59 | LOC_Os09g21780:12009.t01912:unspliced-genomic IMP dehydrogen... |
30 |
8.1 |
60 | LOC_Os07g39090:12007.t03571:unspliced-genomic tetratricopept... |
30 |
8.1 |
61 | LOC_Os06g41040:12006.t03799:unspliced-genomic pentatricopept... |
30 |
8.1 |
62 | LOC_Os06g02970:12006.t00190:unspliced-genomic conserved hypo... |
30 |
8.1 |
63 | LOC_Os02g38580:12002.t03496:unspliced-genomic protein phosph... |
30 |
8.1 |
64 | LOC_Os02g37800:12002.t03418:unspliced-genomic lecithine chol... |
30 |
8.1 |
65 | LOC_Os10g31490:12010.t02472:unspliced-genomic glycine-rich c... |
24 |
8.2 |
66 | LOC_Os10g08280:12010.t00652:unspliced-genomic expressed protein |
30 |
8.2 |
67 | LOC_Os07g11970:12007.t01069:unspliced-genomic cytochrome P45... |
30 |
8.2 |
68 | LOC_Os06g03300:12006.t00223:unspliced-genomic retrotransposo... |
30 |
8.2 |
69 | LOC_Os09g29330:12009.t02611:unspliced-genomic retrotransposo... |
27 |
8.3 |
70 | LOC_Os07g32310:12007.t02915:unspliced-genomic retrotransposo... |
27 |
8.3 |
71 | LOC_Os06g44290:12006.t04117:unspliced-genomic retrotransposo... |
28 |
8.3 |
72 | LOC_Os01g41070:12001.t03629:unspliced-genomic retrotransposo... |
27 |
8.5 |
73 | LOC_Os06g21180:12006.t01935:unspliced-genomic retrotransposo... |
27 |
8.6 |
74 | LOC_Os07g29770:12007.t02667:unspliced-genomic MYND finger fa... |
25 |
8.7 |
75 | LOC_Os03g23050:12003.t02052:unspliced-genomic expressed protein |
29 |
9.4 |
76 | LOC_Os05g47630:12005.t04198:unspliced-genomic peptidyl-tRNA ... |
25 |
9.5 |
>LOC_Os10g35840:12010.t02874:unspliced-genomic glutamyl-tRNA reductase, chloroplast precursor, putative, expressed|
Length = 3412
Score = 39.1 bits (79), Expect(2) = 0.001
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +3 / +2
Query: 3 TEKAVLEQKIKAKVEKTQS* 62
TEKA++EQKIKAKVEK+Q+*
Sbjct: 2981 TEKAIIEQKIKAKVEKSQN* 3040
Score = 24.9 bits (48), Expect(2) = 0.001
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 247 VYISYCGCCG*SPIFQ 294
++++YC CCG S I +
Sbjct: 3235 LFVNYCICCGKSSILK 3282
Score = 37.3 bits (75), Expect = 0.050
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3 / -2
Query: 61 QLWVFSTLALIFCSRTAFSV 2
Q W FST ALIFCS AFSV
Sbjct: 3039 QFWDFSTFALIFCSMIAFSV 2980
Score = 34.5 bits (69), Expect = 0.34
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 2 HGEGGPRAEDQGQGREDPKLRTRRR 76
H EG AEDQG+G E P+LR ++R
Sbjct: 2980 HREGDH*AEDQGEGGEVPELRLKKR 3054
>LOC_Os02g07490:12002.t00646:unspliced-genomic glyceraldehyde-3-phosphate dehydrogenase, cytosolic, putative,|
expressed
Length = 4833
Score = 28.6 bits (56), Expect(2) = 0.20
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3 / +1
Query: 81 PFCISTYTTPPPRMSLHSIYPSIPFCPYLLLSSSHSKCV 197
PFCIS + PR+ L PS C + S + +C+
Sbjct: 4264 PFCISGQASLMPRLVLD*ALPS*SLCHGMTTSGATGECL 4380
Score = 27.6 bits (54), Expect(2) = 0.20
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +3
Query: 2 HGEGGPRAEDQGQGREDPKLRTRRRS 79
HG R + +GR P+LR RRRS
Sbjct: 120 HGAAALRPLPRRRGRRIPRLRRRRRS 197
>LOC_Os09g37200:12009.t03194:unspliced-genomic agmatine coumaroyltransferase, putative, expressed|
Length = 1441
Score = 28.1 bits (55), Expect(2) = 0.40
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2 / +1
Query: 2 HGEGGPRAEDQGQGREDPKLRTRRRSSVL 88
H G PRA + +G DP+ R RR +L
Sbjct: 1054 HRGGPPRAAAEARGAGDPRRRRPRRRRLL 1140
Score = 23.5 bits (45), Expect(2) = 0.40
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2 / +3
Query: 200 RDRGAAKHVCSRTACLCT 253
R RG+ + CSRT C T
Sbjct: 1179 RARGSPRPPCSRTCCAPT 1232
>LOC_Os01g43390:12001.t03855:unspliced-genomic uroporphyrinogen decarboxylase, chloroplast precursor, putative,|
expressed
Length = 4143
Score = 24.9 bits (48), Expect(2) = 1.2
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2 / +2
Query: 17 PRAEDQGQGREDPKLRTRRRSSVLYIYLYHPTP 115
PR+ D R RR + L + L+HP P
Sbjct: 41 PRSRRHRHDLRDGHRRLPRRGAGLLLLLHHPPP 139
Score = 24.9 bits (48), Expect(2) = 1.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1 / +2
Query: 112 PPECRYILSIPVFL 153
PP C Y LS PVFL
Sbjct: 203 PPCCYYSLSPPVFL 244
>LOC_Os12g41980:12012.t03874:unspliced-genomic triacylglycerol lipase, putative, expressed|
Length = 1397
Score = 24.4 bits (47), Expect(2) = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2 / -2
Query: 194 CCRDRGAAKHVCSRTACLCTL 256
C R R A S T C CTL
Sbjct: 832 CFRRRCLASRFTSSTTCCCTL 770
Score = 24.0 bits (46), Expect(2) = 3.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2 / -3
Query: 5 GEGGPRAEDQGQGREDPKLRTRRR 76
G GGPR + R P R RRR
Sbjct: 951 GGGGPRLPAPPRRRAPPSGRARRR 880
>LOC_Os10g36430:12010.t02925:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6436
Score = 27.2 bits (53), Expect(2) = 4.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 174 SSSHSKCVVEIEEQRSMFAPELP 242
+SS S C + EQR+ PELP
Sbjct: 1521 TSSSSSCPAALTEQRARGRPELP 1453
Score = 24.4 bits (47), Expect(2) = 4.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / -1
Query: 111 PPRMSLHSIYPSIPFCP 161
PP+++ SI+PS CP
Sbjct: 2275 PPKVTRRSIWPSGQVCP 2225
>LOC_Os04g26834:12004.t02389:unspliced-genomic pepsin A, putative, expressed|
Length = 9149
Score = 26.7 bits (52), Expect(2) = 5.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2 / +1
Query: 296 LYYIILCWTK*TGIYQCVNGCK 361
LY ++ CW T C GC+
Sbjct: 1276 LYVVMFCWKMLT*FLPCARGCE 1341
Score = 25.4 bits (49), Expect(2) = 5.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3 / +3
Query: 105 TPPPRMSLHSIYPSIPFCPYLLLS 176
TPPP + PS+P P+L S
Sbjct: 18 TPPPPAPFPPLLPSLPPFPHLFRS 89
>LOC_Os03g59310:12003.t05178:unspliced-genomic 40S ribosomal protein S2, putative, expressed|
Length = 1905
Score = 24.4 bits (47), Expect(2) = 5.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 111 PPRMSLHSIYPSIPFCP 161
PP + S +PS P+CP
Sbjct: 470 PPPSAAPSSWPSCPWCP 520
Score = 23.1 bits (44), Expect(2) = 5.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +3
Query: 11 GGPRAEDQGQGRED 52
G PRA QG+G ED
Sbjct: 312 GDPRAGAQGRGDED 353
>LOC_Os08g43410:12008.t04066:unspliced-genomic SHI, putative, expressed|
Length = 1628
Score = 25.4 bits (49), Expect(2) = 5.7
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3 / +1
Query: 108 PPPRMSLHSIYPSIPFCPYLLLSSSHSKCVVEIEEQRSMFAPE 236
PPP++ S Y + P+L C + + EQ+ M E
Sbjct: 799 PPPQVHAASNYALLARPPWLRFFFLR*MCAIVVGEQQQMMVGE 927
Score = 22.1 bits (42), Expect(2) = 5.7
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +3 / +1
Query: 3 TEKAVLEQKIKAKVEKTQS*GPGDGPPFCISTYTTPPP 116
T A + A S PG PP S T+ PP
Sbjct: 625 TSAAAPAARAAASTAPPTSSPPGSLPPSAASVRTSSPP 738
>LOC_Os10g31490:12010.t02472:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,|
expressed
Length = 759
Score = 24.0 bits (46), Expect(2) = 8.2
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3 / -2
Query: 66 PGDGPPFCISTYTTPPP 116
P PPFC PPP
Sbjct: 386 PDPDPPFCPPPLPPPPP 336
Score = 23.1 bits (44), Expect(2) = 8.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3 / -2
Query: 108 PPPRMSLHSIYPSIPFCPY 164
PPP L P P CPY
Sbjct: 224 PPPPPPLAYAPPDPPACPY 168
>LOC_Os09g29330:12009.t02611:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5953
Score = 27.2 bits (53), Expect(2) = 8.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 174 SSSHSKCVVEIEEQRSMFAPELP 242
+SS S C + EQR+ PELP
Sbjct: 1288 TSSSSSCPAALTEQRARGRPELP 1220
Score = 23.5 bits (45), Expect(2) = 8.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 111 PPRMSLHSIYPSIPFCP 161
PP+++ SI+PS CP
Sbjct: 2042 PPKVTGRSIWPSGQVCP 1992
>LOC_Os07g32310:12007.t02915:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5964
Score = 27.2 bits (53), Expect(2) = 8.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 174 SSSHSKCVVEIEEQRSMFAPELP 242
+SS S C + EQR+ PELP
Sbjct: 1288 TSSSSSCPATLTEQRARGRPELP 1220
Score = 23.5 bits (45), Expect(2) = 8.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / -2
Query: 111 PPRMSLHSIYPSIPFCP 161
PP+++ SI+PS CP
Sbjct: 2042 PPKVTGRSIWPSGQVCP 1992
>LOC_Os06g44290:12006.t04117:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
Length = 5825
Score = 27.6 bits (54), Expect(2) = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3 / +2
Query: 93 STYTTPPPRMSLHSIYPSIPFCPYLLLSSS 182
S YTTPPP + + SI +LLSS+
Sbjct: 1397 SIYTTPPPSLPVSGSSSSICSARSILLSST 1486
Score = 23.1 bits (44), Expect(2) = 8.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1 / +1
Query: 238 CLPVYISYCGCCG 276
CL V + YC CG
Sbjct: 2872 CLMVVLEYCQMCG 2910
>LOC_Os01g41070:12001.t03629:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6178
Score = 27.2 bits (53), Expect(2) = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 174 SSSHSKCVVEIEEQRSMFAPELP 242
+SS S C + EQR+ PELP
Sbjct: 1288 TSSSSSCPAALTEQRARGRPELP 1220
Score = 23.5 bits (45), Expect(2) = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 111 PPRMSLHSIYPSIPFCP 161
PP+++ SI+PS CP
Sbjct: 2042 PPKVTGRSIWPSGQVCP 1992
>LOC_Os06g21180:12006.t01935:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6193
Score = 27.2 bits (53), Expect(2) = 8.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 174 SSSHSKCVVEIEEQRSMFAPELP 242
+SS S C + EQR+ PELP
Sbjct: 1288 TSSSSSCPAALTEQRARGRPELP 1220
Score = 23.5 bits (45), Expect(2) = 8.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 111 PPRMSLHSIYPSIPFCP 161
PP+++ SI+PS CP
Sbjct: 2042 PPKVTGRSIWPSGQVCP 1992
>LOC_Os07g29770:12007.t02667:unspliced-genomic MYND finger family protein, expressed|
Length = 10169
Score = 24.9 bits (48), Expect(3) = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1 / +3
Query: 253 ISYCGCCG*SPIFQAVLYNTLLDEINRNISV 345
I Y C P F +L+N L EI R + +
Sbjct: 6153 ILYVLACNRLPFFVLILFNFHLKEIIRKVGI 6245
Score = 23.1 bits (44), Expect(3) = 8.7
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1 / +2
Query: 181 HTPNVL*RSRSSEACLLQNCLPVYISYCGCC 273
H L +S C +Q+ VY+ C CC
Sbjct: 4022 HRYQSLTSKQSGVHCAVQDTSLVYLHSCICC 4114
Score = 22.1 bits (42), Expect(3) = 8.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2 / +1
Query: 11 GGPRAEDQGQGREDPKLRTRRR 76
G PRA G G P R RRR
Sbjct: 79 GIPRATVGGAGPRPPCCRRRRR 144
>LOC_Os05g47630:12005.t04198:unspliced-genomic peptidyl-tRNA hydrolase, putative, expressed|
Length = 2434
Score = 24.9 bits (48), Expect(2) = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 198 QHIWSVMNSAVSRDKKE 148
+H W + N A +DKK+
Sbjct: 1150 KHYWDITNKAYMKDKKK 1100
Score = 24.4 bits (47), Expect(2) = 9.5
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 375 IFFFFLHPL 349
+FFFFLHP+
Sbjct: 1822 LFFFFLHPI 1796
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 184,979,506
Number of extensions: 3512095
Number of successful extensions: 15434
Number of sequences better than 10.0: 76
Length of query: 125
Length of database: 55,613,886
Length adjustment: 46
Effective length of query: 79
Effective length of database: 53,025,098
Effective search space: 4188982742
Effective search space used: 4188982742
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)