| Clone Name | FLbaf6n19 |
|---|---|
| Clone Library Name | barley_pub |
>Q96563:HEM12_HORVU Glutamyl-tRNA reductase 2 - Hordeum vulgare (Barley)| Length = 465 Score = 38.5 bits (88), Expect = 0.007 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKAVLEQKIKAKVEKTQS Sbjct: 447 TEKAVLEQKIKAKVEKTQS 465
>Q42843:HEM11_HORVU Glutamyl-tRNA reductase 1, chloroplast precursor - Hordeum vulgare| (Barley) Length = 527 Score = 38.5 bits (88), Expect = 0.007 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKAVLEQKIKAKVEKTQS Sbjct: 509 TEKAVLEQKIKAKVEKTQS 527
>O48674:HEM1_ORYSA Glutamyl-tRNA reductase, chloroplast precursor - Oryza sativa| (Rice) Length = 537 Score = 34.7 bits (78), Expect = 0.10 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKA++EQKIKAKVEK+Q+ Sbjct: 519 TEKAIIEQKIKAKVEKSQN 537
>O65796:HEM13_HORVU Glutamyl-tRNA reductase 3, chloroplast precursor - Hordeum vulgare| (Barley) Length = 535 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQS 59 TEKAV+EQKIK KVEK ++ Sbjct: 515 TEKAVMEQKIKTKVEKQKT 533
>Q9V776:CP317_DROME Probable cytochrome P450 317a1 - Drosophila melanogaster (Fruit| fly) Length = 518 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 100 IPPHPPECRYILSIPVFLFVPTYC*VHHTPNV 195 +P HP +YIL +FL +PT+ +HH P++ Sbjct: 399 VPDHP---KYILVKELFLIIPTHA-IHHDPDI 426
>Q28263:PDE6A_CANFA Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha -| Canis familiaris (Dog) Length = 861 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 318 QQSII*YSLKNWALTTAATITNVHRQAVLEQTCFAAPRS 202 + S+ Y ++N A + NVH+ AVLE+ C AP S Sbjct: 93 RMSLFMYRVRNGIAELATRLFNVHKDAVLEE-CLVAPDS 130
>O13731:UBR11_SCHPO E3 ubiquitin-protein ligase ubr11 - Schizosaccharomyces pombe| (Fission yeast) Length = 2052 Score = 29.3 bits (64), Expect = 4.3 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -3 Query: 364 FFASINTLIYSCL-FRPTEYYIVQLEKLGSN 275 FFA++N +S + FR EY +VQ E GS+ Sbjct: 1131 FFAAVNASTFSLIIFRAIEYALVQAESFGSS 1161
>P93111:HEM11_CUCSA Glutamyl-tRNA reductase 1, chloroplast precursor - Cucumis sativus| (Cucumber) Length = 552 Score = 29.3 bits (64), Expect = 4.3 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +3 Query: 3 TEKAVLEQKIKAKVEKTQ 56 TE AVLEQKI+AKVE+ Q Sbjct: 534 TEIAVLEQKIRAKVEQNQ 551
>P40528:SYG1_YEAST Protein SYG1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 902 Score = 28.5 bits (62), Expect = 7.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 166 YC*VHHTPNVL*RSRSSEACLLQNCLPVYISYCGC 270 +C HTPN L S S A + +CLP Y + C Sbjct: 596 FCVYSHTPNNLCGSSHSRAMGVLSCLPSYWRFMQC 630
>P11541:PDE6A_BOVIN Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha -| Bos taurus (Bovine) Length = 859 Score = 28.5 bits (62), Expect = 7.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 318 QQSII*YSLKNWALTTAATITNVHRQAVLEQTCFAAPRS 202 + S+ Y +N A + NVH+ AVLE+ C AP S Sbjct: 93 RMSLFMYRARNGIAELATRLFNVHKDAVLEE-CLVAPDS 130
>Q9Z985:UVRA_CHLPN UvrABC system protein A - Chlamydia pneumoniae (Chlamydophila| pneumoniae) Length = 1826 Score = 28.1 bits (61), Expect = 9.6 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +3 Query: 63 GPGDGPP--FCISTYTTPPPRMSLHSIYPSIPFCPYLLLSSS 182 GPG GP F + + T P + LH+ P CP LS S Sbjct: 1457 GPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSIS 1498 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 73,954,471 Number of extensions: 1764690 Number of successful extensions: 3586 Number of sequences better than 10.0: 11 Number of HSP's gapped: 3586 Number of HSP's successfully gapped: 11 Length of query: 125 Length of database: 100,686,439 Length adjustment: 92 Effective length of query: 33 Effective length of database: 75,451,299 Effective search space: 2489892867 Effective search space used: 2489892867 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)