| Clone Name | FLbaf11k08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001061968.1| Oryza sativa (japonica cultivar-group) Os05g0389400 (Os05g0389400) mRNA, complete cds Length = 1970 Score = 1257 bits (634), Expect = 0.0 Identities = 1125/1288 (87%), Gaps = 3/1288 (0%) Strand = Plus / Plus Query: 204 acgcagcggtgggtgatcggggtggggttctgggtgcagggcttccggctcttcccgtgg 263 |||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 364 acgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatgg 423 Query: 264 ctcggcgtcaacttcttcctcaaggacgccatgggcgtcccctcctcctcgctgcagatc 323 || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 424 ctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatc 483 Query: 324 ctccaggcctccgccaccctgcccatggtcgccaagccgctcctcggcctgctctccgac 383 |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 484 ctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgac 543 Query: 384 gccgtccccatccgcggctgccgacgcctgccatacgtcgccatcggcgctctcttgcag 443 |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||| Sbjct: 544 gccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcgctctcttgcag 603 Query: 444 gcagtttcatggttaggaattgccctctggccatctctttctcttccggttcttaccatt 503 ||| |||||||||||| |||||||||||||||| || |||||||||| |||||||||||| Sbjct: 604 gcaatttcatggttagcaattgccctctggccagctatttctcttccagttcttaccatt 663 Query: 504 tttctcctcttgagcaactttggcgcatccatatgtgaggttgccaatgatgccattgta 563 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 664 tttctcctcttgagcaactttggtgcatccatatgtgaggttgccaatgatgccattgta 723 Query: 564 gcggaggccgggaagcaagcaacctcttcctcaggg---gggcagcttcaatcctttgct 620 || || || |||||||||||||||| ||||||||| || |||||||||||||||||| Sbjct: 724 gcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagcttcaatcctttgct 783 Query: 621 tgtatgtttggcgcttctgctggcgcgttaggaaatctccttggtggcattgctctcagc 680 || |||||||| | ||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 784 tggatgtttggttcatctgctggcgctttaggaaatcttgttggtggcattgcactcagt 843 Query: 681 tacttttccccaaaactcatgttcctatttttcgcaatcgttctcgtgctccagttcttc 740 |||||||| |||||| ||||||| || ||||| |||||| |||||||||||||||||| | Sbjct: 844 tacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtgctccagttctgc 903 Query: 741 actactgtggctatatctgagagctccctcaaactccccaaggcaactactaatacatca 800 ||||||||||||||| |||| ||||||||| ||||||| |||||| ||||||| |||| Sbjct: 904 actactgtggctatacctgaaagctccctccaactcccaaaggcagatactaatctatca 963 Query: 801 gtgatttccagcatccgtaaacaaaccaaagagctgtcatatgcgctctgtatgccggaa 860 | | |||||| ||||||| |||| ||||||||||||||||||||| |||||||| ||| Sbjct: 964 gctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctgtgtatgcctgaa 1023 Query: 861 atattttggtcaatcatatggttttcagtgtcctatgctgccataccatttctactcggg 920 |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1024 atattttggtcagtcatttggttttcattgtcctatgctgccataccatttctacttggg 1083 Query: 921 accatgttcttctaccagactgaagtgttgaggctggactcatccatcatcggtttatcc 980 |||||||||||||| |||||||||||||| || || |||||||| | |||||||| ||| Sbjct: 1084 accatgttcttctatcagactgaagtgttaagacttgactcatcagttatcggtttgtcc 1143 Query: 981 aaggtttttggtcaagtggctctcttggcttggagcatggcatacaacaagtgcttcaag 1040 ||||||||||| ||||| |||| || |||||||| ||||||||||||||| |||||| Sbjct: 1144 aaggtttttggacaagtaactctattagcttggagtgtggcatacaacaagtacttcaaa 1203 Query: 1041 acaacgtctgcacgcaaggtcttatcagctctacagttcatcacagcggtcgtaatgttg 1100 ||||| |||||| ||||| ||||||| ||| ||||| | ||||| |||||||| || Sbjct: 1204 acaacacctgcacagaaggttttatcagttctgcagtttcttacagcactcgtaatgctg 1263 Query: 1101 tcagacgtgttatttgttcagggtgtatacaggaaggtgggagtaccagactccatatac 1160 ||||| || ||||||||||||| ||||||| || | ||| |||| || ||||| ||| Sbjct: 1264 tcagatgtactatttgttcagggaatatacagaaacttcggaataccggattccatgtac 1323 Query: 1161 acaattgtgttctcagggctgctagagggccttatgtttttcaaggtgctacccttcagt 1220 |||||||| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||| Sbjct: 1324 acaattgttttctcagggttgttggagggtcttatgttgttcaaggtgctgcccttcagt 1383 Query: 1221 gttcttatcgcaaacctttgcccctccgggtgtgaggggtcggttatggcctttgtcatg 1280 |||||| | ||||| |||||||| || ||||||||||| || ||||||| ||||||||| Sbjct: 1384 gttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatggcttttgtcatg 1443 Query: 1281 tctgcacttgccctatctattatcatcagtggatatcttggtgttgcgcttgctgaattc 1340 |||||||||||||| | | ||||||||| || |||||||| ||||| |||||||||||| Sbjct: 1444 tctgcacttgccctcgcaactatcatcagcggttatcttggggttgcacttgctgaattc 1503 Query: 1341 atgggggtatcaggagaagatttctcagcgctcccggtttgcctgctgattgaggctgga 1400 ||||| ||||| |||| |||||||||||||| ||| ||| ||| |||||||||||| | Sbjct: 1504 atgggagtatctggaggtgatttctcagcgctgccgacttgtctgttgattgaggctgca 1563 Query: 1401 tgcacaatgttgccgctgttttgctcgtcatggattaaagagaggaaagggaaggagaag 1460 ||||||||| | || || |||| ||| |||| ||| |||||||||| || ||||||||| Sbjct: 1564 tgcacaatgctaccactctttttctcctcattgataaaagagaggagagaaaaggagaag 1623 Query: 1461 aaagaagagtagaatccatctgtaggat 1488 |||||||| |||||| || || |||||| Sbjct: 1624 aaagaagaatagaattcacctataggat 1651
>dbj|AK100484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097B07, full insert sequence Length = 1971 Score = 1257 bits (634), Expect = 0.0 Identities = 1125/1288 (87%), Gaps = 3/1288 (0%) Strand = Plus / Plus Query: 204 acgcagcggtgggtgatcggggtggggttctgggtgcagggcttccggctcttcccgtgg 263 |||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 366 acgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatgg 425 Query: 264 ctcggcgtcaacttcttcctcaaggacgccatgggcgtcccctcctcctcgctgcagatc 323 || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 426 ctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatc 485 Query: 324 ctccaggcctccgccaccctgcccatggtcgccaagccgctcctcggcctgctctccgac 383 |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 486 ctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgac 545 Query: 384 gccgtccccatccgcggctgccgacgcctgccatacgtcgccatcggcgctctcttgcag 443 |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||| Sbjct: 546 gccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcgctctcttgcag 605 Query: 444 gcagtttcatggttaggaattgccctctggccatctctttctcttccggttcttaccatt 503 ||| |||||||||||| |||||||||||||||| || |||||||||| |||||||||||| Sbjct: 606 gcaatttcatggttagcaattgccctctggccagctatttctcttccagttcttaccatt 665 Query: 504 tttctcctcttgagcaactttggcgcatccatatgtgaggttgccaatgatgccattgta 563 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 666 tttctcctcttgagcaactttggtgcatccatatgtgaggttgccaatgatgccattgta 725 Query: 564 gcggaggccgggaagcaagcaacctcttcctcaggg---gggcagcttcaatcctttgct 620 || || || |||||||||||||||| ||||||||| || |||||||||||||||||| Sbjct: 726 gcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagcttcaatcctttgct 785 Query: 621 tgtatgtttggcgcttctgctggcgcgttaggaaatctccttggtggcattgctctcagc 680 || |||||||| | ||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 786 tggatgtttggttcatctgctggcgctttaggaaatcttgttggtggcattgcactcagt 845 Query: 681 tacttttccccaaaactcatgttcctatttttcgcaatcgttctcgtgctccagttcttc 740 |||||||| |||||| ||||||| || ||||| |||||| |||||||||||||||||| | Sbjct: 846 tacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtgctccagttctgc 905 Query: 741 actactgtggctatatctgagagctccctcaaactccccaaggcaactactaatacatca 800 ||||||||||||||| |||| ||||||||| ||||||| |||||| ||||||| |||| Sbjct: 906 actactgtggctatacctgaaagctccctccaactcccaaaggcagatactaatctatca 965 Query: 801 gtgatttccagcatccgtaaacaaaccaaagagctgtcatatgcgctctgtatgccggaa 860 | | |||||| ||||||| |||| ||||||||||||||||||||| |||||||| ||| Sbjct: 966 gctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctgtgtatgcctgaa 1025 Query: 861 atattttggtcaatcatatggttttcagtgtcctatgctgccataccatttctactcggg 920 |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1026 atattttggtcagtcatttggttttcattgtcctatgctgccataccatttctacttggg 1085 Query: 921 accatgttcttctaccagactgaagtgttgaggctggactcatccatcatcggtttatcc 980 |||||||||||||| |||||||||||||| || || |||||||| | |||||||| ||| Sbjct: 1086 accatgttcttctatcagactgaagtgttaagacttgactcatcagttatcggtttgtcc 1145 Query: 981 aaggtttttggtcaagtggctctcttggcttggagcatggcatacaacaagtgcttcaag 1040 ||||||||||| ||||| |||| || |||||||| ||||||||||||||| |||||| Sbjct: 1146 aaggtttttggacaagtaactctattagcttggagtgtggcatacaacaagtacttcaaa 1205 Query: 1041 acaacgtctgcacgcaaggtcttatcagctctacagttcatcacagcggtcgtaatgttg 1100 ||||| |||||| ||||| ||||||| ||| ||||| | ||||| |||||||| || Sbjct: 1206 acaacacctgcacagaaggttttatcagttctgcagtttcttacagcactcgtaatgctg 1265 Query: 1101 tcagacgtgttatttgttcagggtgtatacaggaaggtgggagtaccagactccatatac 1160 ||||| || ||||||||||||| ||||||| || | ||| |||| || ||||| ||| Sbjct: 1266 tcagatgtactatttgttcagggaatatacagaaacttcggaataccggattccatgtac 1325 Query: 1161 acaattgtgttctcagggctgctagagggccttatgtttttcaaggtgctacccttcagt 1220 |||||||| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||| Sbjct: 1326 acaattgttttctcagggttgttggagggtcttatgttgttcaaggtgctgcccttcagt 1385 Query: 1221 gttcttatcgcaaacctttgcccctccgggtgtgaggggtcggttatggcctttgtcatg 1280 |||||| | ||||| |||||||| || ||||||||||| || ||||||| ||||||||| Sbjct: 1386 gttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatggcttttgtcatg 1445 Query: 1281 tctgcacttgccctatctattatcatcagtggatatcttggtgttgcgcttgctgaattc 1340 |||||||||||||| | | ||||||||| || |||||||| ||||| |||||||||||| Sbjct: 1446 tctgcacttgccctcgcaactatcatcagcggttatcttggggttgcacttgctgaattc 1505 Query: 1341 atgggggtatcaggagaagatttctcagcgctcccggtttgcctgctgattgaggctgga 1400 ||||| ||||| |||| |||||||||||||| ||| ||| ||| |||||||||||| | Sbjct: 1506 atgggagtatctggaggtgatttctcagcgctgccgacttgtctgttgattgaggctgca 1565 Query: 1401 tgcacaatgttgccgctgttttgctcgtcatggattaaagagaggaaagggaaggagaag 1460 ||||||||| | || || |||| ||| |||| ||| |||||||||| || ||||||||| Sbjct: 1566 tgcacaatgctaccactctttttctcctcattgataaaagagaggagagaaaaggagaag 1625 Query: 1461 aaagaagagtagaatccatctgtaggat 1488 |||||||| |||||| || || |||||| Sbjct: 1626 aaagaagaatagaattcacctataggat 1653
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 955 bits (482), Expect = 0.0 Identities = 916/1060 (86%), Gaps = 3/1060 (0%) Strand = Plus / Plus Query: 432 gctctcttgcaggcagtttcatggttaggaattgccctctggccatctctttctcttccg 491 ||||||||||||||| |||||||||||| |||||||||||||||| || |||||||||| Sbjct: 173326 gctctcttgcaggcaatttcatggttagcaattgccctctggccagctatttctcttcca 173385 Query: 492 gttcttaccatttttctcctcttgagcaactttggcgcatccatatgtgaggttgccaat 551 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 173386 gttcttaccatttttctcctcttgagcaactttggtgcatccatatgtgaggttgccaat 173445 Query: 552 gatgccattgtagcggaggccgggaagcaagcaacctcttcctcaggg---gggcagctt 608 |||||||||||||| || || |||||||||||||||| ||||||||| || |||||| Sbjct: 173446 gatgccattgtagcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagctt 173505 Query: 609 caatcctttgcttgtatgtttggcgcttctgctggcgcgttaggaaatctccttggtggc 668 |||||||||||||| |||||||| | ||||||||||| ||||||||||| |||||||| Sbjct: 173506 caatcctttgcttggatgtttggttcatctgctggcgctttaggaaatcttgttggtggc 173565 Query: 669 attgctctcagctacttttccccaaaactcatgttcctatttttcgcaatcgttctcgtg 728 ||||| ||||| |||||||| |||||| ||||||| || ||||| |||||| |||||||| Sbjct: 173566 attgcactcagttacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtg 173625 Query: 729 ctccagttcttcactactgtggctatatctgagagctccctcaaactccccaaggcaact 788 |||||||||| |||||||||||||||| |||| ||||||||| ||||||| |||||| | Sbjct: 173626 ctccagttctgcactactgtggctatacctgaaagctccctccaactcccaaaggcagat 173685 Query: 789 actaatacatcagtgatttccagcatccgtaaacaaaccaaagagctgtcatatgcgctc 848 |||||| ||||| | |||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 173686 actaatctatcagctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctg 173745 Query: 849 tgtatgccggaaatattttggtcaatcatatggttttcagtgtcctatgctgccatacca 908 |||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 173746 tgtatgcctgaaatattttggtcagtcatttggttttcattgtcctatgctgccatacca 173805 Query: 909 tttctactcgggaccatgttcttctaccagactgaagtgttgaggctggactcatccatc 968 |||||||| ||||||||||||||||| |||||||||||||| || || |||||||| | Sbjct: 173806 tttctacttgggaccatgttcttctatcagactgaagtgttaagacttgactcatcagtt 173865 Query: 969 atcggtttatccaaggtttttggtcaagtggctctcttggcttggagcatggcatacaac 1028 |||||||| |||||||||||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 173866 atcggtttgtccaaggtttttggacaagtaactctattagcttggagtgtggcatacaac 173925 Query: 1029 aagtgcttcaagacaacgtctgcacgcaaggtcttatcagctctacagttcatcacagcg 1088 |||| |||||| ||||| |||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 173926 aagtacttcaaaacaacacctgcacagaaggttttatcagttctgcagtttcttacagca 173985 Query: 1089 gtcgtaatgttgtcagacgtgttatttgttcagggtgtatacaggaaggtgggagtacca 1148 |||||||| ||||||| || ||||||||||||| ||||||| || | ||| |||| Sbjct: 173986 ctcgtaatgctgtcagatgtactatttgttcagggaatatacagaaacttcggaataccg 174045 Query: 1149 gactccatatacacaattgtgttctcagggctgctagagggccttatgtttttcaaggtg 1208 || ||||| ||||||||||| ||||||||| || | ||||| |||||||| ||||||||| Sbjct: 174046 gattccatgtacacaattgttttctcagggttgttggagggtcttatgttgttcaaggtg 174105 Query: 1209 ctacccttcagtgttcttatcgcaaacctttgcccctccgggtgtgaggggtcggttatg 1268 || ||||||||||||||| | ||||| |||||||| || ||||||||||| || ||||| Sbjct: 174106 ctgcccttcagtgttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatg 174165 Query: 1269 gcctttgtcatgtctgcacttgccctatctattatcatcagtggatatcttggtgttgcg 1328 || ||||||||||||||||||||||| | | ||||||||| || |||||||| ||||| Sbjct: 174166 gcttttgtcatgtctgcacttgccctcgcaactatcatcagcggttatcttggggttgca 174225 Query: 1329 cttgctgaattcatgggggtatcaggagaagatttctcagcgctcccggtttgcctgctg 1388 ||||||||||||||||| ||||| |||| |||||||||||||| ||| ||| ||| || Sbjct: 174226 cttgctgaattcatgggagtatctggaggtgatttctcagcgctgccgacttgtctgttg 174285 Query: 1389 attgaggctggatgcacaatgttgccgctgttttgctcgtcatggattaaagagaggaaa 1448 |||||||||| |||||||||| | || || |||| ||| |||| ||| |||||||||| | Sbjct: 174286 attgaggctgcatgcacaatgctaccactctttttctcctcattgataaaagagaggaga 174345 Query: 1449 gggaaggagaagaaagaagagtagaatccatctgtaggat 1488 | ||||||||||||||||| |||||| || || |||||| Sbjct: 174346 gaaaaggagaagaaagaagaatagaattcacctataggat 174385 Score = 303 bits (153), Expect = 1e-78 Identities = 210/229 (91%) Strand = Plus / Plus Query: 204 acgcagcggtgggtgatcggggtggggttctgggtgcagggcttccggctcttcccgtgg 263 |||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 171984 acgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatgg 172043 Query: 264 ctcggcgtcaacttcttcctcaaggacgccatgggcgtcccctcctcctcgctgcagatc 323 || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 172044 ctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatc 172103 Query: 324 ctccaggcctccgccaccctgcccatggtcgccaagccgctcctcggcctgctctccgac 383 |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 172104 ctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgac 172163 Query: 384 gccgtccccatccgcggctgccgacgcctgccatacgtcgccatcggcg 432 |||||||||||||||||| ||| ||||| || |||||||||||||||| Sbjct: 172164 gccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcg 172212
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 955 bits (482), Expect = 0.0 Identities = 916/1060 (86%), Gaps = 3/1060 (0%) Strand = Plus / Plus Query: 432 gctctcttgcaggcagtttcatggttaggaattgccctctggccatctctttctcttccg 491 ||||||||||||||| |||||||||||| |||||||||||||||| || |||||||||| Sbjct: 5614 gctctcttgcaggcaatttcatggttagcaattgccctctggccagctatttctcttcca 5673 Query: 492 gttcttaccatttttctcctcttgagcaactttggcgcatccatatgtgaggttgccaat 551 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5674 gttcttaccatttttctcctcttgagcaactttggtgcatccatatgtgaggttgccaat 5733 Query: 552 gatgccattgtagcggaggccgggaagcaagcaacctcttcctcaggg---gggcagctt 608 |||||||||||||| || || |||||||||||||||| ||||||||| || |||||| Sbjct: 5734 gatgccattgtagcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagctt 5793 Query: 609 caatcctttgcttgtatgtttggcgcttctgctggcgcgttaggaaatctccttggtggc 668 |||||||||||||| |||||||| | ||||||||||| ||||||||||| |||||||| Sbjct: 5794 caatcctttgcttggatgtttggttcatctgctggcgctttaggaaatcttgttggtggc 5853 Query: 669 attgctctcagctacttttccccaaaactcatgttcctatttttcgcaatcgttctcgtg 728 ||||| ||||| |||||||| |||||| ||||||| || ||||| |||||| |||||||| Sbjct: 5854 attgcactcagttacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtg 5913 Query: 729 ctccagttcttcactactgtggctatatctgagagctccctcaaactccccaaggcaact 788 |||||||||| |||||||||||||||| |||| ||||||||| ||||||| |||||| | Sbjct: 5914 ctccagttctgcactactgtggctatacctgaaagctccctccaactcccaaaggcagat 5973 Query: 789 actaatacatcagtgatttccagcatccgtaaacaaaccaaagagctgtcatatgcgctc 848 |||||| ||||| | |||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 5974 actaatctatcagctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctg 6033 Query: 849 tgtatgccggaaatattttggtcaatcatatggttttcagtgtcctatgctgccatacca 908 |||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 6034 tgtatgcctgaaatattttggtcagtcatttggttttcattgtcctatgctgccatacca 6093 Query: 909 tttctactcgggaccatgttcttctaccagactgaagtgttgaggctggactcatccatc 968 |||||||| ||||||||||||||||| |||||||||||||| || || |||||||| | Sbjct: 6094 tttctacttgggaccatgttcttctatcagactgaagtgttaagacttgactcatcagtt 6153 Query: 969 atcggtttatccaaggtttttggtcaagtggctctcttggcttggagcatggcatacaac 1028 |||||||| |||||||||||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 6154 atcggtttgtccaaggtttttggacaagtaactctattagcttggagtgtggcatacaac 6213 Query: 1029 aagtgcttcaagacaacgtctgcacgcaaggtcttatcagctctacagttcatcacagcg 1088 |||| |||||| ||||| |||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 6214 aagtacttcaaaacaacacctgcacagaaggttttatcagttctgcagtttcttacagca 6273 Query: 1089 gtcgtaatgttgtcagacgtgttatttgttcagggtgtatacaggaaggtgggagtacca 1148 |||||||| ||||||| || ||||||||||||| ||||||| || | ||| |||| Sbjct: 6274 ctcgtaatgctgtcagatgtactatttgttcagggaatatacagaaacttcggaataccg 6333 Query: 1149 gactccatatacacaattgtgttctcagggctgctagagggccttatgtttttcaaggtg 1208 || ||||| ||||||||||| ||||||||| || | ||||| |||||||| ||||||||| Sbjct: 6334 gattccatgtacacaattgttttctcagggttgttggagggtcttatgttgttcaaggtg 6393 Query: 1209 ctacccttcagtgttcttatcgcaaacctttgcccctccgggtgtgaggggtcggttatg 1268 || ||||||||||||||| | ||||| |||||||| || ||||||||||| || ||||| Sbjct: 6394 ctgcccttcagtgttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatg 6453 Query: 1269 gcctttgtcatgtctgcacttgccctatctattatcatcagtggatatcttggtgttgcg 1328 || ||||||||||||||||||||||| | | ||||||||| || |||||||| ||||| Sbjct: 6454 gcttttgtcatgtctgcacttgccctcgcaactatcatcagcggttatcttggggttgca 6513 Query: 1329 cttgctgaattcatgggggtatcaggagaagatttctcagcgctcccggtttgcctgctg 1388 ||||||||||||||||| ||||| |||| |||||||||||||| ||| ||| ||| || Sbjct: 6514 cttgctgaattcatgggagtatctggaggtgatttctcagcgctgccgacttgtctgttg 6573 Query: 1389 attgaggctggatgcacaatgttgccgctgttttgctcgtcatggattaaagagaggaaa 1448 |||||||||| |||||||||| | || || |||| ||| |||| ||| |||||||||| | Sbjct: 6574 attgaggctgcatgcacaatgctaccactctttttctcctcattgataaaagagaggaga 6633 Query: 1449 gggaaggagaagaaagaagagtagaatccatctgtaggat 1488 | ||||||||||||||||| |||||| || || |||||| Sbjct: 6634 gaaaaggagaagaaagaagaatagaattcacctataggat 6673 Score = 303 bits (153), Expect = 1e-78 Identities = 210/229 (91%) Strand = Plus / Plus Query: 204 acgcagcggtgggtgatcggggtggggttctgggtgcagggcttccggctcttcccgtgg 263 |||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 4272 acgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatgg 4331 Query: 264 ctcggcgtcaacttcttcctcaaggacgccatgggcgtcccctcctcctcgctgcagatc 323 || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 4332 ctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatc 4391 Query: 324 ctccaggcctccgccaccctgcccatggtcgccaagccgctcctcggcctgctctccgac 383 |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 4392 ctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgac 4451 Query: 384 gccgtccccatccgcggctgccgacgcctgccatacgtcgccatcggcg 432 |||||||||||||||||| ||| ||||| || |||||||||||||||| Sbjct: 4452 gccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcg 4500
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 955 bits (482), Expect = 0.0 Identities = 916/1060 (86%), Gaps = 3/1060 (0%) Strand = Plus / Plus Query: 432 gctctcttgcaggcagtttcatggttaggaattgccctctggccatctctttctcttccg 491 ||||||||||||||| |||||||||||| |||||||||||||||| || |||||||||| Sbjct: 18700211 gctctcttgcaggcaatttcatggttagcaattgccctctggccagctatttctcttcca 18700270 Query: 492 gttcttaccatttttctcctcttgagcaactttggcgcatccatatgtgaggttgccaat 551 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 18700271 gttcttaccatttttctcctcttgagcaactttggtgcatccatatgtgaggttgccaat 18700330 Query: 552 gatgccattgtagcggaggccgggaagcaagcaacctcttcctcaggg---gggcagctt 608 |||||||||||||| || || |||||||||||||||| ||||||||| || |||||| Sbjct: 18700331 gatgccattgtagcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagctt 18700390 Query: 609 caatcctttgcttgtatgtttggcgcttctgctggcgcgttaggaaatctccttggtggc 668 |||||||||||||| |||||||| | ||||||||||| ||||||||||| |||||||| Sbjct: 18700391 caatcctttgcttggatgtttggttcatctgctggcgctttaggaaatcttgttggtggc 18700450 Query: 669 attgctctcagctacttttccccaaaactcatgttcctatttttcgcaatcgttctcgtg 728 ||||| ||||| |||||||| |||||| ||||||| || ||||| |||||| |||||||| Sbjct: 18700451 attgcactcagttacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtg 18700510 Query: 729 ctccagttcttcactactgtggctatatctgagagctccctcaaactccccaaggcaact 788 |||||||||| |||||||||||||||| |||| ||||||||| ||||||| |||||| | Sbjct: 18700511 ctccagttctgcactactgtggctatacctgaaagctccctccaactcccaaaggcagat 18700570 Query: 789 actaatacatcagtgatttccagcatccgtaaacaaaccaaagagctgtcatatgcgctc 848 |||||| ||||| | |||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 18700571 actaatctatcagctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctg 18700630 Query: 849 tgtatgccggaaatattttggtcaatcatatggttttcagtgtcctatgctgccatacca 908 |||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 18700631 tgtatgcctgaaatattttggtcagtcatttggttttcattgtcctatgctgccatacca 18700690 Query: 909 tttctactcgggaccatgttcttctaccagactgaagtgttgaggctggactcatccatc 968 |||||||| ||||||||||||||||| |||||||||||||| || || |||||||| | Sbjct: 18700691 tttctacttgggaccatgttcttctatcagactgaagtgttaagacttgactcatcagtt 18700750 Query: 969 atcggtttatccaaggtttttggtcaagtggctctcttggcttggagcatggcatacaac 1028 |||||||| |||||||||||||| ||||| |||| || |||||||| ||||||||||| Sbjct: 18700751 atcggtttgtccaaggtttttggacaagtaactctattagcttggagtgtggcatacaac 18700810 Query: 1029 aagtgcttcaagacaacgtctgcacgcaaggtcttatcagctctacagttcatcacagcg 1088 |||| |||||| ||||| |||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 18700811 aagtacttcaaaacaacacctgcacagaaggttttatcagttctgcagtttcttacagca 18700870 Query: 1089 gtcgtaatgttgtcagacgtgttatttgttcagggtgtatacaggaaggtgggagtacca 1148 |||||||| ||||||| || ||||||||||||| ||||||| || | ||| |||| Sbjct: 18700871 ctcgtaatgctgtcagatgtactatttgttcagggaatatacagaaacttcggaataccg 18700930 Query: 1149 gactccatatacacaattgtgttctcagggctgctagagggccttatgtttttcaaggtg 1208 || ||||| ||||||||||| ||||||||| || | ||||| |||||||| ||||||||| Sbjct: 18700931 gattccatgtacacaattgttttctcagggttgttggagggtcttatgttgttcaaggtg 18700990 Query: 1209 ctacccttcagtgttcttatcgcaaacctttgcccctccgggtgtgaggggtcggttatg 1268 || ||||||||||||||| | ||||| |||||||| || ||||||||||| || ||||| Sbjct: 18700991 ctgcccttcagtgttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatg 18701050 Query: 1269 gcctttgtcatgtctgcacttgccctatctattatcatcagtggatatcttggtgttgcg 1328 || ||||||||||||||||||||||| | | ||||||||| || |||||||| ||||| Sbjct: 18701051 gcttttgtcatgtctgcacttgccctcgcaactatcatcagcggttatcttggggttgca 18701110 Query: 1329 cttgctgaattcatgggggtatcaggagaagatttctcagcgctcccggtttgcctgctg 1388 ||||||||||||||||| ||||| |||| |||||||||||||| ||| ||| ||| || Sbjct: 18701111 cttgctgaattcatgggagtatctggaggtgatttctcagcgctgccgacttgtctgttg 18701170 Query: 1389 attgaggctggatgcacaatgttgccgctgttttgctcgtcatggattaaagagaggaaa 1448 |||||||||| |||||||||| | || || |||| ||| |||| ||| |||||||||| | Sbjct: 18701171 attgaggctgcatgcacaatgctaccactctttttctcctcattgataaaagagaggaga 18701230 Query: 1449 gggaaggagaagaaagaagagtagaatccatctgtaggat 1488 | ||||||||||||||||| |||||| || || |||||| Sbjct: 18701231 gaaaaggagaagaaagaagaatagaattcacctataggat 18701270 Score = 303 bits (153), Expect = 1e-78 Identities = 210/229 (91%) Strand = Plus / Plus Query: 204 acgcagcggtgggtgatcggggtggggttctgggtgcagggcttccggctcttcccgtgg 263 |||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 18698869 acgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatgg 18698928 Query: 264 ctcggcgtcaacttcttcctcaaggacgccatgggcgtcccctcctcctcgctgcagatc 323 || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 18698929 ctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatc 18698988 Query: 324 ctccaggcctccgccaccctgcccatggtcgccaagccgctcctcggcctgctctccgac 383 |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 18698989 ctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgac 18699048 Query: 384 gccgtccccatccgcggctgccgacgcctgccatacgtcgccatcggcg 432 |||||||||||||||||| ||| ||||| || |||||||||||||||| Sbjct: 18699049 gccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcg 18699097
>gb|AC006012.2| Homo sapiens PAC clone RP5-942I16 from 7, complete sequence Length = 121598 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1444 ggaaagggaaggagaagaaagaa 1466 ||||||||||||||||||||||| Sbjct: 63284 ggaaagggaaggagaagaaagaa 63262
>gb|AY574854.1| Phaeoclavulina cyanocephala voucher TENN37827 ATPase subunit 6 (atp6) gene, partial cds; mitochondrial Length = 543 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1839 tacatttcttttcattctttat 1860 |||||||||||||||||||||| Sbjct: 271 tacatttcttttcattctttat 292
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 tcctcggcctgctctccgacgc 385 |||||||||||||||||||||| Sbjct: 3072988 tcctcggcctgctctccgacgc 3073009
>emb|CT981963.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 793 Score = 44.1 bits (22), Expect = 1.9 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1272 tttgtcatgtctgcacttgccctatctattatcatcagtggatatcttggtgttgcgctt 1331 ||||||||||| || ||||| || | |||| |||||||||| ||||||||||||||| Sbjct: 174 tttgtcatgtcggccattgccttagcatttataatcagtggattccttggtgttgcgctt 233 Query: 1332 gc 1333 || Sbjct: 234 gc 235
>emb|CT980452.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 792 Score = 44.1 bits (22), Expect = 1.9 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1272 tttgtcatgtctgcacttgccctatctattatcatcagtggatatcttggtgttgcgctt 1331 ||||||||||| || ||||| || | |||| |||||||||| ||||||||||||||| Sbjct: 174 tttgtcatgtcggccattgccttagcatttataatcagtggattccttggtgttgcgctt 233 Query: 1332 gc 1333 || Sbjct: 234 gc 235
>gb|AC154555.3| Mus musculus BAC clone RP23-418L12 from chromosome 16, complete sequence Length = 192614 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1448 agggaaggagaagaaagaagag 1469 |||||||||||||||||||||| Sbjct: 183591 agggaaggagaagaaagaagag 183612
>gb|AC152166.4| Mus musculus BAC clone RP23-425A3 from chromosome 7, complete sequence Length = 216652 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1437 aaagagaggaaagggaaggaga 1458 |||||||||||||||||||||| Sbjct: 114714 aaagagaggaaagggaaggaga 114735
>gb|AC137677.24| Mus musculus chromosome 1, clone RP23-257D12, complete sequence Length = 189162 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1444 ggaaagggaaggagaagaaagaagag 1469 |||||| ||||||||||||||||||| Sbjct: 82464 ggaaagagaaggagaagaaagaagag 82439
>gb|AC092832.7| Homo sapiens X BAC RP11-494I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196491 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1445 gaaagggaaggagaagaaagaa 1466 |||||||||||||||||||||| Sbjct: 155280 gaaagggaaggagaagaaagaa 155259
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 gtcgccaagccgctcctcggcc 372 |||||||||||||||||||||| Sbjct: 4243604 gtcgccaagccgctcctcggcc 4243583
>gb|AC160946.6| Mus musculus 10 BAC RP23-175G6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192628 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1837 gttacatttcttttcattcttt 1858 |||||||||||||||||||||| Sbjct: 168805 gttacatttcttttcattcttt 168784
>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166350 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1837 gttacatttcttttcattcttt 1858 |||||||||||||||||||||| Sbjct: 26570 gttacatttcttttcattcttt 26549
>gb|AF114454.1|AF114454 Gyrodon merulioides ATP synthase subunit 6 (atp6) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 636 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1839 tacatttcttttcattctttat 1860 |||||||||||||||||||||| Sbjct: 362 tacatttcttttcattctttat 383
>emb|CT030693.7| Mouse DNA sequence from clone RP24-109B11 on chromosome 16, complete sequence Length = 166299 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1448 agggaaggagaagaaagaagag 1469 |||||||||||||||||||||| Sbjct: 105541 agggaaggagaagaaagaagag 105562
>gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, complete sequence Length = 184609 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1444 ggaaagggaaggagaagaaagaagag 1469 |||||| ||||||||||||||||||| Sbjct: 19946 ggaaagagaaggagaagaaagaagag 19971
>ref|XM_414818.2| PREDICTED: Gallus gallus myosin XVA (MYO15A), mRNA Length = 7231 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1444 ggaaagggaaggagaagaaag 1464 ||||||||||||||||||||| Sbjct: 176 ggaaagggaaggagaagaaag 196
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1441 agaggaaagggaaggagaagaaagaagag 1469 |||||||||| ||| |||||||||||||| Sbjct: 626958 agaggaaaggaaagaagaagaaagaagag 626986
>ref|NW_001091927.1| Theileria annulata strain Ankara clone C9 Length = 1979170 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 680 ctacttttccccaaaactcat 700 ||||||||||||||||||||| Sbjct: 1106421 ctacttttccccaaaactcat 1106401
>gb|AC098644.4| Takifugu rubripes clone 205P11, complete sequence Length = 89481 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1838 ttacatttcttttcattcttt 1858 ||||||||||||||||||||| Sbjct: 73504 ttacatttcttttcattcttt 73484
>gb|AC139217.8| Mus musculus chromosome 1, clone RP23-428E11, complete sequence Length = 188052 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1439 agagaggaaagggaaggagaa 1459 ||||||||||||||||||||| Sbjct: 7969 agagaggaaagggaaggagaa 7949
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1439 agagaggaaagggaaggagaa 1459 ||||||||||||||||||||| Sbjct: 133440 agagaggaaagggaaggagaa 133420
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1453 aggagaagaaagaagagtaga 1473 ||||||||||||||||||||| Sbjct: 114501 aggagaagaaagaagagtaga 114521
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1453 aggagaagaaagaagagtaga 1473 ||||||||||||||||||||| Sbjct: 51264 aggagaagaaagaagagtaga 51284
>gb|AC110731.10| Mus musculus chromosome 6, clone RP23-433J5, complete sequence Length = 206482 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1445 gaaagggaaggagaagaaagaagag 1469 ||||| ||||||||||||||||||| Sbjct: 206316 gaaagagaaggagaagaaagaagag 206292
>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence Length = 161099 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1439 agagaggaaagggaaggagaa 1459 ||||||||||||||||||||| Sbjct: 15015 agagaggaaagggaaggagaa 15035
>gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosome 5, complete sequence Length = 184869 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1871 ttctgtatgtccatcttttat 1891 ||||||||||||||||||||| Sbjct: 167130 ttctgtatgtccatcttttat 167110
>gb|AC132620.3| Mus musculus BAC clone RP23-179A12 from chromosome 6, complete sequence Length = 178174 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1445 gaaagggaaggagaagaaagaagag 1469 ||||| ||||||||||||||||||| Sbjct: 104679 gaaagagaaggagaagaaagaagag 104703
>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence Length = 218179 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1871 ttctgtatgtccatcttttat 1891 ||||||||||||||||||||| Sbjct: 23885 ttctgtatgtccatcttttat 23865
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1440 gagaggaaagggaaggagaagaaag 1464 ||||||||||||||||| ||||||| Sbjct: 135150 gagaggaaagggaaggaaaagaaag 135174
>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence Length = 138622 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1443 aggaaagggaaggagaagaaagaag 1467 |||||||||||||| |||||||||| Sbjct: 73453 aggaaagggaaggaaaagaaagaag 73429
>gb|AC114915.3| Mus musculus BAC clone RP23-54K21 from 2, complete sequence Length = 257013 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1441 agaggaaagggaaggagaaga 1461 ||||||||||||||||||||| Sbjct: 158527 agaggaaagggaaggagaaga 158507
>gb|AC025219.6| Homo sapiens chromosome 15, clone RP11-276M12, complete sequence Length = 144244 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 473 gccatctctttctcttccggttctt 497 |||||||||||||| |||||||||| Sbjct: 108282 gccatctctttctcctccggttctt 108258
>ref|NM_134696.1| Drosophila melanogaster CG2839-RA (CG2839), mRNA Length = 2481 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1441 agaggaaagggaaggagaagaaagaagag 1469 |||||||||| ||| |||||||||||||| Sbjct: 1296 agaggaaaggaaagaagaagaaagaagag 1324
>gb|AF045644.1| Caenorhabditis elegans cosmid F57H12, complete sequence Length = 20803 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1437 aaagagaggaaagggaaggagaagaaaga 1465 ||||||| ||||| ||||||||||||||| Sbjct: 654 aaagagaagaaagagaaggagaagaaaga 682
>gb|AC012184.7| Homo sapiens chromosome 16 clone RP11-529K1, complete sequence Length = 196010 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1440 gagaggaaagggaaggagaag 1460 ||||||||||||||||||||| Sbjct: 166623 gagaggaaagggaaggagaag 166603
>gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, complete sequence Length = 199717 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1440 gagaggaaagggaaggagaagaaag 1464 ||||||||||||||||| ||||||| Sbjct: 12246 gagaggaaagggaaggaaaagaaag 12270
>gb|U40933.1| Caenorhabditis elegans cosmid F20D12, complete sequence Length = 37255 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1437 aaagagaggaaagggaaggagaagaaaga 1465 ||||||| ||||| ||||||||||||||| Sbjct: 36009 aaagagaagaaagagaaggagaagaaaga 36037
>gb|AC163293.4| Mus musculus BAC clone RP23-156J21 from chromosome 16, complete sequence Length = 205834 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1450 ggaaggagaagaaagaagagt 1470 ||||||||||||||||||||| Sbjct: 126770 ggaaggagaagaaagaagagt 126750
>gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosome 6, complete sequence Length = 209064 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1838 ttacatttcttttcattcttt 1858 ||||||||||||||||||||| Sbjct: 93324 ttacatttcttttcattcttt 93344
>ref|NM_068930.2| Caenorhabditis elegans F57H12.5 (phosphatase) mRNA, complete cds Length = 1657 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1437 aaagagaggaaagggaaggagaagaaaga 1465 ||||||| ||||| ||||||||||||||| Sbjct: 358 aaagagaagaaagagaaggagaagaaaga 386
>emb|AJ246953.1|ARA246953 Ascochyta rabiei microsatellite DNA, clone ArA10T Length = 315 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1440 gagaggaaagggaaggagaagaaagaaga 1468 ||||||||||| |||| |||||||||||| Sbjct: 264 gagaggaaaggaaaggcgaagaaagaaga 292
>gb|AC108210.4| Homo sapiens BAC clone RP11-457P14 from 4, complete sequence Length = 123377 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1437 aaagagaggaaagggaaggagaaga 1461 ||||||||||||||||||| ||||| Sbjct: 102186 aaagagaggaaagggaaggtgaaga 102210
>gb|AC096374.7| Rattus norvegicus BAC CH230-17K7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 239221 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1436 taaagagaggaaagggaagga 1456 ||||||||||||||||||||| Sbjct: 190234 taaagagaggaaagggaagga 190254
>gb|AC103976.6| Homo sapiens chromosome 15, clone RP11-121E15, complete sequence Length = 182826 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 473 gccatctctttctcttccggttctt 497 |||||||||||||| |||||||||| Sbjct: 119230 gccatctctttctcctccggttctt 119254
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1453 aggagaagaaagaagagtaga 1473 ||||||||||||||||||||| Sbjct: 19874271 aggagaagaaagaagagtaga 19874291
>emb|AL662885.7| Human DNA sequence from clone RP13-208E17 on chromosome X Contains the ZCCHC5 gene for zinc finger CCHC domain containing 5, complete sequence Length = 154060 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gttcttaccatttttctcctc 512 ||||||||||||||||||||| Sbjct: 129192 gttcttaccatttttctcctc 129212
>emb|AL590385.23| Human DNA sequence from clone RP11-5K23 on chromosome 1 Contains the FCGR2A gene for Fc fragment of IgG low affinity IIa receptor for (CD32), the HSPA6 gene for heat shock 70kDa protein 6 (HSP70B'), a ribosomal protein S23 (RPS23) pseudogene, the FCGR3A gene for Fc fragment of IgG low affinity IIIa receptor for (CD16), a novel gene and three CpG islands, complete sequence Length = 129505 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1446 aaagggaaggagaagaaagaa 1466 ||||||||||||||||||||| Sbjct: 108711 aaagggaaggagaagaaagaa 108691
>gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosome 3, complete sequence Length = 209923 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1439 agagaggaaagggaaggagaagaaa 1463 |||||||||||||||||| |||||| Sbjct: 66819 agagaggaaagggaaggaaaagaaa 66843
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1442 gaggaaagggaaggagaagaa 1462 ||||||||||||||||||||| Sbjct: 121660 gaggaaagggaaggagaagaa 121640
>emb|AL451067.12| Human DNA sequence from clone RP11-25K21 on chromosome 1, complete sequence Length = 150019 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1446 aaagggaaggagaagaaagaa 1466 ||||||||||||||||||||| Sbjct: 16754 aaagggaaggagaagaaagaa 16734 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1446 aaagggaaggagaagaaagaa 1466 ||||||||||||||||||||| Sbjct: 98114 aaagggaaggagaagaaagaa 98094
>gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone BACR48E08, complete sequence Length = 182726 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1441 agaggaaagggaaggagaagaaagaagag 1469 |||||||||| ||| |||||||||||||| Sbjct: 30349 agaggaaaggaaagaagaagaaagaagag 30321
>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete sequence Length = 93234 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1839 tacatttcttttcattcttta 1859 ||||||||||||||||||||| Sbjct: 70541 tacatttcttttcattcttta 70561
>gb|AC011444.5|AC011444 Homo sapiens chromosome 19 clone CTC-232P5, complete sequence Length = 133925 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1446 aaagggaaggagaagaaagaa 1466 ||||||||||||||||||||| Sbjct: 86510 aaagggaaggagaagaaagaa 86530
>emb|AL157996.8|CNS01RGH Human chromosome 14 DNA sequence BAC C-2525P14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209242 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1449 gggaaggagaagaaagaagag 1469 ||||||||||||||||||||| Sbjct: 187966 gggaaggagaagaaagaagag 187946
>emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-363J20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208222 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1449 gggaaggagaagaaagaagag 1469 ||||||||||||||||||||| Sbjct: 206224 gggaaggagaagaaagaagag 206244
>emb|AL357092.4|CNS05TDR Human chromosome 14 DNA sequence BAC R-1079H9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188162 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1648 ttaaaaagggaagagcagata 1668 ||||||||||||||||||||| Sbjct: 62725 ttaaaaagggaagagcagata 62745
>gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, complete sequence Length = 232792 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1445 gaaagggaaggagaagaaagaagag 1469 ||||| ||||||||||||||||||| Sbjct: 43325 gaaagagaaggagaagaaagaagag 43349
>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12 Length = 200050 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 977 atccaaggtttttggtcaagt 997 ||||||||||||||||||||| Sbjct: 86916 atccaaggtttttggtcaagt 86936
>emb|AL928690.9| Mouse DNA sequence from clone RP23-443L19 on chromosome 2, complete sequence Length = 98535 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1441 agaggaaagggaaggagaaga 1461 ||||||||||||||||||||| Sbjct: 48869 agaggaaagggaaggagaaga 48889
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 977 atccaaggtttttggtcaagt 997 ||||||||||||||||||||| Sbjct: 97062 atccaaggtttttggtcaagt 97082
>gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, complete sequence Length = 219132 Score = 42.1 bits (21), Expect = 7.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1443 aggaaagggaaggagaagaaagaag 1467 |||||||||||||| |||||||||| Sbjct: 60258 aggaaagggaaggaaaagaaagaag 60234
>emb|AL583885.17| Mouse DNA sequence from clone RP23-323K24 on chromosome 15, complete sequence Length = 136387 Score = 42.1 bits (21), Expect = 7.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1441 agaggaaagggaaggagaagaaagaagag 1469 |||| ||||||||||||| |||||||||| Sbjct: 94048 agagaaaagggaaggagaggaaagaagag 94020
>emb|AL831715.7| Mouse DNA sequence from clone RP23-48E15 on chromosome X, complete sequence Length = 163675 Score = 42.1 bits (21), Expect = 7.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1166 tgtgttctcagggctgctaga 1186 ||||||||||||||||||||| Sbjct: 128241 tgtgttctcagggctgctaga 128261 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 360,334,256 Number of extensions: 19840321 Number of successful extensions: 414271 Number of sequences better than 10.0: 68 Number of HSP's gapped: 414261 Number of HSP's successfully gapped: 72 Length of query: 1934 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1911 Effective length of database: 18,503,978,556 Effective search space: 35361103020516 Effective search space used: 35361103020516 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)