| Clone Name | FLbaf4a08 |
|---|---|
| Clone Library Name | barley_pub |
>P79385:MFGM_PIG Lactadherin - Sus scrofa (Pig)| Length = 409 Score = 33.1 bits (74), Expect = 1.4 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +1 Query: 166 KVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVG 285 +VTG + + GH + Y AY D+ V WTE RD G Sbjct: 320 RVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQG 359
>P18832:COL7_CAEEL Cuticle collagen 7 precursor - Caenorhabditis elegans| Length = 316 Score = 32.0 bits (71), Expect = 3.1 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +3 Query: 201 PGPPREAGAV----QPGVPGRVGAVDGEPRRGQGLP 296 PGPP AG+ Q G PG G+ +RG+GLP Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLP 206
>Q95114:MFGM_BOVIN Lactadherin precursor - Bos taurus (Bovine)| Length = 427 Score = 31.6 bits (70), Expect = 4.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 166 KVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVG 285 +VTG + + GH + Y AY D+ V WTE +D G Sbjct: 338 RVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPG 377
>P50465:END8_ECOLI Endonuclease VIII - Escherichia coli| Length = 263 Score = 30.4 bits (67), Expect = 8.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 785 RVAQYRSQYQENTVELHQSSDLRIMVPPHSLQHPLLPRSNAD 660 RV + + Q + T+ L+ +SD+ ++ P HP L R D Sbjct: 88 RVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPD 129
>Q8FJU5:END8_ECOL6 Endonuclease VIII - Escherichia coli O6| Length = 263 Score = 30.4 bits (67), Expect = 8.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 785 RVAQYRSQYQENTVELHQSSDLRIMVPPHSLQHPLLPRSNAD 660 RV + + Q + T+ L+ +SD+ ++ P HP L R D Sbjct: 88 RVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPD 129
>Q8X9C6:END8_ECO57 Endonuclease VIII - Escherichia coli O157:H7| Length = 263 Score = 30.4 bits (67), Expect = 8.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 785 RVAQYRSQYQENTVELHQSSDLRIMVPPHSLQHPLLPRSNAD 660 RV + + Q + T+ L+ +SD+ ++ P HP L R D Sbjct: 88 RVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPD 129
>P32057:WCAI_ECOLI Putative colanic acid biosynthesis glycosyl transferase wcaI -| Escherichia coli Length = 407 Score = 30.4 bits (67), Expect = 8.9 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = +1 Query: 145 PAFAIVNKVTGECIKHSTGQGHPVKLV---PYNPAYQ--DESVLWTESRDVGKG--FRC 300 P + K TGE ++ QGH V+++ PY P +Q + W R+ G +RC Sbjct: 12 PELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKREEGAATVWRC 70 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 117,006,010 Number of extensions: 2380270 Number of successful extensions: 9560 Number of sequences better than 10.0: 7 Number of HSP's gapped: 9540 Number of HSP's successfully gapped: 7 Length of query: 277 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 165 Effective length of database: 69,965,399 Effective search space: 11544290835 Effective search space used: 11544290835 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)