ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf6n05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065045:Os02g0712000 1633 0.0
2Os08g0364100:Os08g0364100 32 2.9
3AK110289: 32 2.9
4Os01g0605600:Os01g0605600 32 3.7
5AK107688:Os08g0544400 31 4.9
6AK063439:Os09g0479100 31 4.9
7AK060667:Os07g0694400 31 4.9
8AK119865: 31 6.4
9AK109305:Os05g0474700 31 6.4
10AK073621:Os12g0498900 31 6.4
11Os07g0647400:Os07g0647400 30 8.3

>AK065045:Os02g0712000 |
          Length = 914
 Score = 1633 bits (4229), Expect = 0.0
 Identities = 814/914 (89%), Positives = 851/914 (93%), Gaps = 1/914 (0%)
 Frame = +2

Query: 248  MQAAXXXXXXXXXXPVVDCQGRAVALNXXXXXXXXXXFFLPLERVVRALNLIRDCWDAFG 427
            MQAA          PVVDCQGRAVALN          FFLPLERVVRALNLIRD W+AFG
Sbjct: 1    MQAASGTKGGSSGSPVVDCQGRAVALNAGSKSSSASAFFLPLERVVRALNLIRDSWEAFG 60

Query: 428  IKSESVYIPRGTLQMTFQHKGFEETRRLGLRNETEQMVRLVSPAGETGMLVVDSVVPEGP 607
             K ES YIPRGTLQ+TFQHKGFEETRRLGLRNETEQMVRLVSP+GETGMLVVDSVVPEGP
Sbjct: 61   SKPESDYIPRGTLQVTFQHKGFEETRRLGLRNETEQMVRLVSPSGETGMLVVDSVVPEGP 120

Query: 608  AHKHLEPGDVLVHINGEVVTQFLVMETLLDDSVGKEVNLEIERGGVPLTVKLEVEDLHSI 787
            AHKHLEPGDVLV +N EVVTQFL METLLDDSVGKE++L+IERGG PLTVKLEVEDLHSI
Sbjct: 121  AHKHLEPGDVLVRMNDEVVTQFLAMETLLDDSVGKEIDLQIERGGTPLTVKLEVEDLHSI 180

Query: 788  TPNHFLEVSGAVIHPLSYQQARNFRFKCGLVYVAEAGYMLSRASVPRHSIIKKFAGEDIE 967
            TPNHFLEVSGAVIHPLSYQQARNFRFKCGLVYVAEAGYMLSRASVPRH+IIKK AGEDIE
Sbjct: 181  TPNHFLEVSGAVIHPLSYQQARNFRFKCGLVYVAEAGYMLSRASVPRHAIIKKLAGEDIE 240

Query: 968  KLDDLIAVISKLSRGARVPLEYVKYTDRYRNKSVLVTIDQHGWYAPPQLYTRNDATGLWN 1147
             L DLIA ISKLSRGARVPLEYVKYTDRYRNKSVLVTID+H WYAPPQLYTRNDATGLW 
Sbjct: 241  NLGDLIACISKLSRGARVPLEYVKYTDRYRNKSVLVTIDRHEWYAPPQLYTRNDATGLWT 300

Query: 1148 AKLAIPLESPFVVS-HRAGHMDANLNSVSPLTESSPMDLKCQHESENTADGCVKMQTDEE 1324
            AK AIP ESPF+ S H AG +DAN NSVS L ESSPMDLKCQHESEN  DGC+K QTD+E
Sbjct: 301  AKSAIPPESPFIASAHHAGPIDANSNSVSSLPESSPMDLKCQHESENLTDGCIKTQTDDE 360

Query: 1325 IAVDGSHSGEDSIIEKKRRRVDEEIAAEGTISSFGDLDDIKDGALRHPSSMEGSDLAQTI 1504
            I VDGSHS EDS++EKKRRRVDEEIAAEGTISS GDLD+IK G LRH SS++GSDLA+TI
Sbjct: 361  INVDGSHSSEDSLVEKKRRRVDEEIAAEGTISSSGDLDEIKGGGLRHLSSVDGSDLARTI 420

Query: 1505 SSNASLAEQVIEPALVMFEVHVPPICMLDGVHSQHFFGTGVIIYHSDCLGLVAVDRNTVA 1684
            SSNASLAEQVIEPALVMFEVHVPP+CMLDGVHSQHFFGTGVIIYHSDCLGLVAVDRNTVA
Sbjct: 421  SSNASLAEQVIEPALVMFEVHVPPVCMLDGVHSQHFFGTGVIIYHSDCLGLVAVDRNTVA 480

Query: 1685 VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASVIRAAKLLPEPALRR 1864
            VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASV+RAAKLLPEPALRR
Sbjct: 481  VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASVVRAAKLLPEPALRR 540

Query: 1865 GDSVYLVGLSRSLQATSRKSTITNPCTAVNIGSADCPRYRAINMEVIELDTDFGSSFSGI 2044
            GDSVYLVGLSRSLQATSRKS ITNPCTAVNIGSADCPRYRAINMEVIELDTDFGS+FSGI
Sbjct: 541  GDSVYLVGLSRSLQATSRKSIITNPCTAVNIGSADCPRYRAINMEVIELDTDFGSAFSGI 600

Query: 2045 LTDEQGRVQALWASFSTQLKYGCSTSEDHQFVRGIPIYAISQVLEKIISGTPGPFRLING 2224
            LTDEQGRVQALWASFSTQLKYGCS+SEDHQFVRGIPIYAISQVLEK+ISGTPGPFR+ING
Sbjct: 601  LTDEQGRVQALWASFSTQLKYGCSSSEDHQFVRGIPIYAISQVLEKVISGTPGPFRIING 660

Query: 2225 IRRPMPLVRLLEVELYPTLLSKARSYGLSDNWVQALAKKDPVRRQVLRVKGCLAGSKAEK 2404
            +RRP+P +RLLEVELYPTLLSKARSYGLSD+WVQALAKKDPVRRQVLRVKGCLAGSKAE 
Sbjct: 661  VRRPIPFIRLLEVELYPTLLSKARSYGLSDSWVQALAKKDPVRRQVLRVKGCLAGSKAEN 720

Query: 2405 LLEQGDMILAINKEPITCFLDIENACQKLDQPIDSDGVLNMTIFRQGKEIDLVVGTDVRD 2584
            LLEQGDMILAINKEPITCFLDIENACQKLDQ +DSDGVLNMTIFRQGKEIDL+VGTDVRD
Sbjct: 721  LLEQGDMILAINKEPITCFLDIENACQKLDQSVDSDGVLNMTIFRQGKEIDLIVGTDVRD 780

Query: 2585 GNGSTRMVNWCGSIIQDPHSAVRALGFLPKEGHGVYVARWCHGSPVHRYGLYALQWIVEV 2764
            GNG+TRMVNWCG IIQDPHSAVRALGFLP+EGHGVYVARWCHGSPVHRYGLYALQWIVEV
Sbjct: 781  GNGTTRMVNWCGCIIQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEV 840

Query: 2765 NGQPTPDLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDT 2944
            NG+PTPDLE+FIQVVKGLE+ EFVRV+TVHLNGKPRVLTLKQDLHYWPTWEL FEPET T
Sbjct: 841  NGKPTPDLETFIQVVKGLENGEFVRVRTVHLNGKPRVLTLKQDLHYWPTWELRFEPETST 900

Query: 2945 WKRRTIKALQPTVA 2986
            WKR  IKALQ TVA
Sbjct: 901  WKRGIIKALQSTVA 914



to top

>Os08g0364100:Os08g0364100 |
          Length = 344

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -3

Query: 1431 SPKDDIVPSAAISSSTRRLFFSMIESSPEWDPSTAISSSVCIFTHPSAVFSD-SCWHLRS 1255
            +P D  V S  +++  R +    + ++    PS A+SSS   +  PS+V S  + W  RS
Sbjct: 63   NPSDSFVSSRLLAALQRHVLLGTVAAALGRRPSRAVSSSTARWWRPSSVMSSLAQWRRRS 122

Query: 1254 IG 1249
             G
Sbjct: 123  DG 124



to top

>AK110289: |
          Length = 709

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -1

Query: 1811 QLPVQKDHRQPMQNYEQDAEKQPLQVFQWDMQQKRALYQR*IQQLYSYRRQP 1656
            Q PVQ+ +   +Q     A++QPL + Q+     +A YQ+ + Q  + ++QP
Sbjct: 108  QAPVQQHYMPQVQQQFAYAQQQPLAMQQYQQYPPQAHYQQPVMQQQAQQQQP 159



to top

>Os01g0605600:Os01g0605600 |
          Length = 834

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
 Frame = +2

Query: 1130 ATGLWNAKLAIPLESPFVVSHRAG----HMDANLNSVSPLTESSPMDLKCQHESENTADG 1297
            ++G  N  + + L +  +  H+      HM    N++S  T++        H+ EN+ +G
Sbjct: 583  SSGSDNHMVPVTLHASGLTKHKRSMDESHMLEGNNTIS--TDAGTTTNGADHQRENSVNG 640

Query: 1298 CVKMQTDEEIAVDGSHSGEDSIIEKKRRRVDEEIAAEGTISSFGDLDDI-----KDGALR 1462
               +  + E    GSHS    +        +E       I S    D++        +L 
Sbjct: 641  TSNLVANPEHQQGGSHSDTSRVTSTGEVSNEESETGHAAIKSHTSTDELGQHGSDPKSLP 700

Query: 1463 HPSSMEGSDLAQTISSNA 1516
               S    DLA+T ++N+
Sbjct: 701  VEDSSNAHDLAKTCTNNS 718



to top

>AK107688:Os08g0544400 |
          Length = 475

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
 Frame = +2

Query: 2699 RWCHGSPVHRYGLYALQW--------IVEVNGQPTPDLESFIQVVKGLEDREFVRVKTVH 2854
            RW + +    + +Y L +        +++V GQP   ++ F++   GL+DR F  V ++H
Sbjct: 393  RWVYWANPAAWTVYGLMFSQLGDRTELIQVPGQPEQTVKEFLEGYLGLQDRYFNLVTSLH 452

Query: 2855 L 2857
            +
Sbjct: 453  V 453



to top

>AK063439:Os09g0479100 |
          Length = 503

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 14/43 (32%), Positives = 28/43 (65%)
 Frame = +2

Query: 2756 VEVNGQPTPDLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTL 2884
            ++++ Q TPDL+S ++++  LE R  + +  V+L+    VLT+
Sbjct: 431  IKLDLQQTPDLDSSLRLINWLEYRRVLEILCVNLDNMHEVLTV 473



to top

>AK060667:Os07g0694400 |
          Length = 338

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 32/120 (26%), Positives = 51/120 (42%)
 Frame = +2

Query: 377 RVVRALNLIRDCWDAFGIKSESVYIPRGTLQMTFQHKGFEETRRLGLRNETEQMVRLVSP 556
           R +RA N+I      F   S     P+  + +T   +  +  RR      T   +RLVSP
Sbjct: 61  RTLRASNVI------FSRSSNRPQQPQLVVVVTTTEQSDDSERRAAGLTRTAHALRLVSP 114

Query: 557 AGETGMLVVDSVVPEGPAHKHLEPGDVLVHINGEVVTQFLVMETLLDDSVGKEVNLEIER 736
                  ++  VV E PA KH  P    +     VV + L+M+   DD    ++++  E+
Sbjct: 115 P------LLWLVVEEAPAEKHAAPPTARLLRRTGVVHRHLLMKQ-GDDDFSMQISMRREQ 167



to top

>AK119865: |
          Length = 602

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 455 RGTLQMTFQHKGFEETRRLGLRNETEQMVRLVSPAGETGMLVVDSVVPEGPA 610
           +G L + F  +GFE+ ++  L  E E+  +    A +    + D   P G A
Sbjct: 137 KGVLGLKFMKRGFEKQKQQALEREAEEDAQRAEDAADAAAAISDDERPTGAA 188



to top

>AK109305:Os05g0474700 |
          Length = 171

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +2

Query: 1685 VSISDIMLSFAAYPIEIPAEVVFLHPVHNFALVAYDPSALGAGASVIRAAKLL-PEPALR 1861
            V +S  +  F + P+   A+V+  HP H     A+ P   GAG +  R   ++ P+  L+
Sbjct: 24   VHLSGRVDEFTSCPLTA-ADVLAAHPNHALT-AAWSPGGAGAGGAPCRKIVIVSPDSELK 81

Query: 1862 RGDSVYLVGLSRSLQATSRKST 1927
            RG   +L+  + S  A  +  T
Sbjct: 82   RGRIYFLIPSACSAPAADKMMT 103



to top

>AK073621:Os12g0498900 |
          Length = 215

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +2

Query: 1319 EEIAVDGSHSGEDSIIEKKRRRVDEEIAAEGTISSFGDLDDIKDGALRHPSSMEGSDLAQ 1498
            +E+A D       S+ E     V EE   EG++S  GD DD  D +L   S ++G  L Q
Sbjct: 99   DEVADDAPEDLTGSLSESSDSPVSEECTEEGSVSDDGDDDD--DESLIEISLVDGHYLGQ 156



to top

>Os07g0647400:Os07g0647400 |
          Length = 460

 Score = 30.4 bits (67), Expect = 8.3
 Identities = 25/95 (26%), Positives = 42/95 (44%)
 Frame = +2

Query: 1223 SVSPLTESSPMDLKCQHESENTADGCVKMQTDEEIAVDGSHSGEDSIIEKKRRRVDEEIA 1402
            SVS + ESS      +    +T D  VK     E + D S   + S++ ++R   +EE  
Sbjct: 353  SVSNIEESSDKKAVTEEPRSSTGDDAVKDGAKHETS-DSSKDSDYSMVSRQRTTTEEEDL 411

Query: 1403 AEGTISSFGDLDDIKDGALRHPSSMEGSDLAQTIS 1507
                I   G+ ++ K G+    SS    +L + +S
Sbjct: 412  EWDEIEDLGEHEE-KRGSNNDSSSALKEELRKRLS 445


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 100,746,088
Number of extensions: 2458519
Number of successful extensions: 6501
Number of sequences better than 10.0: 11
Number of HSP's gapped: 6491
Number of HSP's successfully gapped: 11
Length of query: 1089
Length of database: 15,399,855
Length adjustment: 111
Effective length of query: 978
Effective length of database: 10,955,304
Effective search space: 10714287312
Effective search space used: 10714287312
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top