ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf6l23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001068036.1| Oryza sativa (japonica cultivar-group) Os08g... 147 4e-31
2gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-31
3gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-31
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-31
5dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-31
6dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-31
7dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-31
8dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-31
9gb|AY107437.1| Zea mays PCO062669 mRNA sequence 86 1e-12
10dbj|AB041352.1| Nicotiana tabacum cig3 mRNA, complete cds 54 0.004
11ref|NM_121945.3| Arabidopsis thaliana unknown protein (AT5G19400... 50 0.062
12gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, com... 50 0.062
13ref|NM_001021825.1| Schizosaccharomyces pombe 972h- hypothetical... 50 0.062
14emb|AL022305.1|SPBC14C8 S.pombe chromosome II cosmid c14C8 50 0.062
15dbj|AB012696.1| Schizosaccharomyces pombe pol5+ mRNA for DNA pol... 50 0.062
16gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8... 48 0.25
17ref|XM_633680.1| Dictyostelium discoideum AX4 hypothetical prote... 46 0.97
18emb|CT025525.8| Mouse DNA sequence from clone RP23-285C6 on chro... 46 0.97
19gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, comple... 46 0.97
20emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in ... 46 0.97
21gb|AC154259.1| Mus musculus BAC clone RP24-220E4 from 14, comple... 46 0.97
22emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C ... 44 3.8
23ref|NM_117531.2| Arabidopsis thaliana unknown protein (AT4G14510... 44 3.8
24gb|AC135736.6| Mus musculus BAC clone RP23-251A14 from chromosom... 44 3.8
25gb|AC122392.3| Mus musculus BAC clone RP24-81I14 from chromosome... 44 3.8
26gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence 44 3.8
27emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2... 44 3.8
28emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 3.8
29emb|AL670001.1|NCB14H13 Neurospora crassa DNA linkage group II B... 44 3.8
30emb|AL670543.1|NCB7K22 Neurospora crassa DNA linkage group II BA... 44 3.8
31emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, ... 44 3.8
32emb|BX323447.11| Zebrafish DNA sequence from clone DKEY-115J5 in... 44 3.8
33ref|XM_950914.1| Neurospora crassa OR74A hypothetical protein (N... 44 3.8
34emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in... 44 3.8
35emb|Z81097.1|CEK07A1 Caenorhabditis elegans Cosmid K07A1, comple... 44 3.8
36gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosom... 44 3.8

>ref|NM_001068036.1| Oryza sativa (japonica cultivar-group) Os08g0305300 (Os08g0305300)
           mRNA, complete cds
          Length = 4000
 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                       
Query: 272 gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
           |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 423 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 482

                                                                       
Query: 332 tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
           ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 483 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 542

                                         
Query: 392 gtggcagttgcactacaaaagaatcgagga 421
           |||||||||||||||||||||||| |||||
Sbjct: 543 gtggcagttgcactacaaaagaattgagga 572



 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1321 ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
            |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 1463 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 1522

                                                                        
Query: 1381 ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
            |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 1523 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 1582

                                                                        
Query: 1441 ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
            ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 1583 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 1642

                                                                        
Query: 1501 cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
            |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 1643 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 1702

                                                      
Query: 1561 agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
            ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 1703 agatggatgaaaagcaagccgatgcaagatctttcttctgga 1744



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1656 gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
            ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 1798 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 1857

                                                                        
Query: 1716 ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
            || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 1858 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 1917

                                                                        
Query: 1776 gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
            || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 1918 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 1977

                                                                        
Query: 1836 gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
            ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 1978 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 2037

                                          
Query: 1896 cagattgatcaactgagaatattttttgat 1925
            || |||||||| ||| |||||| |||||||
Sbjct: 2038 caaattgatcagctgcgaatatattttgat 2067



 Score = 63.9 bits (32), Expect = 4e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 1152 tttgttaggctcaatggaattcttttcacaaagaccagtttggaaacatttg 1203
            |||||| | |||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 1294 tttgttcgcctcaatggaattcttttcacaaggacaagcttggaaacatttg 1345



 Score = 61.9 bits (31), Expect = 2e-05
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 759 cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
           |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 889 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 948

                                      
Query: 819 ggcaatccacaccatcagcttgcaata 845
           ||||| ||||| |||||||||||||||
Sbjct: 949 ggcaacccacatcatcagcttgcaata 975



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 2112 ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
            ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 2254 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 2308



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2831 tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
            |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 2946 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 3005

                
Query: 2891 taac 2894
            ||||
Sbjct: 3006 taac 3009



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 3043 ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
            |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 3158 ccagcagtactttcaccactccctttccttttcctggaaaaca 3200



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 3386 tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
            |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 3478 tttcttttggaagatgcttgtcttggaagcataacaagtgct 3519



to top

>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                         
Query: 272   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 16775 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 16834

                                                                         
Query: 332   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 16835 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 16894

                                           
Query: 392   gtggcagttgcactacaaaagaatcgagga 421
             |||||||||||||||||||||||| |||||
Sbjct: 16895 gtggcagttgcactacaaaagaattgagga 16924



 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Plus

                                                                         
Query: 1321  ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
             |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 19234 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 19293

                                                                         
Query: 1381  ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
             |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 19294 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 19353

                                                                         
Query: 1441  ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
             ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 19354 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 19413

                                                                         
Query: 1501  cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
             |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 19414 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 19473

                                                       
Query: 1561  agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
             ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 19474 agatggatgaaaagcaagccgatgcaagatctttcttctgga 19515



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Plus

                                                                         
Query: 1656  gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
             ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 19569 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 19628

                                                                         
Query: 1716  ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
             || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 19629 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 19688

                                                                         
Query: 1776  gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
             || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 19689 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 19748

                                                                         
Query: 1836  gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
             ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 19749 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 19808

                                           
Query: 1896  cagattgatcaactgagaatattttttgat 1925
             || |||||||| ||| |||||| |||||||
Sbjct: 19809 caaattgatcagctgcgaatatattttgat 19838



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 2112  ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
             ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 20025 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 20079



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 2831  tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
             |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 20717 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 20776

                 
Query: 2891  taac 2894
             ||||
Sbjct: 20777 taac 20780



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 1152  tttgttaggctcaatggaattcttttcacaa 1182
             |||||| | ||||||||||||||||||||||
Sbjct: 18983 tttgttcgcctcaatggaattcttttcacaa 19013



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 3043  ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
             |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 20929 ccagcagtactttcaccactccctttccttttcctggaaaaca 20971



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                         
Query: 759   cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
             |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 17241 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 17300

                               
Query: 819   ggcaatccacaccatcag 836
             ||||| ||||| ||||||
Sbjct: 17301 ggcaacccacatcatcag 17318



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 3386  tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
             |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 21375 tttcttttggaagatgcttgtcttggaagcataacaagtgct 21416



to top

>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Minus

                                                                         
Query: 1321  ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
             |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 57701 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 57642

                                                                         
Query: 1381  ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
             |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 57641 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 57582

                                                                         
Query: 1441  ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
             ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 57581 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 57522

                                                                         
Query: 1501  cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
             |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 57521 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 57462

                                                       
Query: 1561  agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
             ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 57461 agatggatgaaaagcaagccgatgcaagatctttcttctgga 57420



 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                         
Query: 272   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 60160 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 60101

                                                                         
Query: 332   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 60100 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 60041

                                           
Query: 392   gtggcagttgcactacaaaagaatcgagga 421
             |||||||||||||||||||||||| |||||
Sbjct: 60040 gtggcagttgcactacaaaagaattgagga 60011



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Minus

                                                                         
Query: 1656  gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
             ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 57366 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 57307

                                                                         
Query: 1716  ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
             || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 57306 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 57247

                                                                         
Query: 1776  gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
             || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 57246 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 57187

                                                                         
Query: 1836  gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
             ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 57186 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 57127

                                           
Query: 1896  cagattgatcaactgagaatattttttgat 1925
             || |||||||| ||| |||||| |||||||
Sbjct: 57126 caaattgatcagctgcgaatatattttgat 57097



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 2112  ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
             ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 56910 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 56856



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 2831  tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
             |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 56218 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 56159

                 
Query: 2891  taac 2894
             ||||
Sbjct: 56158 taac 56155



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 3043  ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
             |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 56006 ccagcagtactttcaccactccctttccttttcctggaaaaca 55964



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 1152  tttgttaggctcaatggaattcttttcacaa 1182
             |||||| | ||||||||||||||||||||||
Sbjct: 57952 tttgttcgcctcaatggaattcttttcacaa 57922



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 3386  tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
             |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 55560 tttcttttggaagatgcttgtcttggaagcataacaagtgct 55519



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                         
Query: 759   cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
             |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 59694 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 59635

                               
Query: 819   ggcaatccacaccatcag 836
             ||||| ||||| ||||||
Sbjct: 59634 ggcaacccacatcatcag 59617



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Minus

                                                                            
Query: 1321     ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
                |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 12720522 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 12720463

                                                                            
Query: 1381     ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
                |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 12720462 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 12720403

                                                                            
Query: 1441     ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
                ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 12720402 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 12720343

                                                                            
Query: 1501     cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
                |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 12720342 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 12720283

                                                          
Query: 1561     agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
                ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 12720282 agatggatgaaaagcaagccgatgcaagatctttcttctgga 12720241



 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                            
Query: 272      gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
                |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 12722981 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 12722922

                                                                            
Query: 332      tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
                ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 12722921 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 12722862

                                              
Query: 392      gtggcagttgcactacaaaagaatcgagga 421
                |||||||||||||||||||||||| |||||
Sbjct: 12722861 gtggcagttgcactacaaaagaattgagga 12722832



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Minus

                                                                            
Query: 1656     gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
                ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 12720187 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 12720128

                                                                            
Query: 1716     ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
                || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 12720127 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 12720068

                                                                            
Query: 1776     gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
                || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 12720067 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 12720008

                                                                            
Query: 1836     gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
                ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 12720007 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 12719948

                                              
Query: 1896     cagattgatcaactgagaatattttttgat 1925
                || |||||||| ||| |||||| |||||||
Sbjct: 12719947 caaattgatcagctgcgaatatattttgat 12719918



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 2112     ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
                ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 12719731 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 12719677



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 2831     tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
                |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 12719039 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 12718980

                    
Query: 2891     taac 2894
                ||||
Sbjct: 12718979 taac 12718976



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 3043     ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
                |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 12718827 ccagcagtactttcaccactccctttccttttcctggaaaaca 12718785



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 1152     tttgttaggctcaatggaattcttttcacaa 1182
                |||||| | ||||||||||||||||||||||
Sbjct: 12720773 tttgttcgcctcaatggaattcttttcacaa 12720743



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 3386     tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
                |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 12718381 tttcttttggaagatgcttgtcttggaagcataacaagtgct 12718340



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                            
Query: 759      cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
                |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 12722515 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 12722456

                                  
Query: 819      ggcaatccacaccatcag 836
                ||||| ||||| ||||||
Sbjct: 12722455 ggcaacccacatcatcag 12722438



to top

>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Minus

                                                                         
Query: 1321  ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
             |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 64517 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 64458

                                                                         
Query: 1381  ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
             |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 64457 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 64398

                                                                         
Query: 1441  ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
             ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 64397 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 64338

                                                                         
Query: 1501  cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
             |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 64337 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 64278

                                                       
Query: 1561  agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
             ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 64277 agatggatgaaaagcaagccgatgcaagatctttcttctgga 64236



 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                         
Query: 272   gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
             |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 66976 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 66917

                                                                         
Query: 332   tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
             ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 66916 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 66857

                                           
Query: 392   gtggcagttgcactacaaaagaatcgagga 421
             |||||||||||||||||||||||| |||||
Sbjct: 66856 gtggcagttgcactacaaaagaattgagga 66827



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Minus

                                                                         
Query: 1656  gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
             ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 64182 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 64123

                                                                         
Query: 1716  ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
             || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 64122 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 64063

                                                                         
Query: 1776  gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
             || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 64062 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 64003

                                                                         
Query: 1836  gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
             ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 64002 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 63943

                                           
Query: 1896  cagattgatcaactgagaatattttttgat 1925
             || |||||||| ||| |||||| |||||||
Sbjct: 63942 caaattgatcagctgcgaatatattttgat 63913



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 2112  ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
             ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 63726 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 63672



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 2831  tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
             |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 63034 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 62975

                 
Query: 2891  taac 2894
             ||||
Sbjct: 62974 taac 62971



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 3043  ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
             |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 62822 ccagcagtactttcaccactccctttccttttcctggaaaaca 62780



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 1152  tttgttaggctcaatggaattcttttcacaa 1182
             |||||| | ||||||||||||||||||||||
Sbjct: 64768 tttgttcgcctcaatggaattcttttcacaa 64738



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 3386  tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
             |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 62376 tttcttttggaagatgcttgtcttggaagcataacaagtgct 62335



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                         
Query: 759   cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
             |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 66510 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 66451

                               
Query: 819   ggcaatccacaccatcag 836
             ||||| ||||| ||||||
Sbjct: 66450 ggcaacccacatcatcag 66433



to top

>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Minus

                                                                          
Query: 1321   ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
              |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 106491 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 106432

                                                                          
Query: 1381   ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
              |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 106431 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 106372

                                                                          
Query: 1441   ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
              ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 106371 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 106312

                                                                          
Query: 1501   cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
              |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 106311 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 106252

                                                        
Query: 1561   agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
              ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 106251 agatggatgaaaagcaagccgatgcaagatctttcttctgga 106210



 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                          
Query: 272    gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
              |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 108950 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 108891

                                                                          
Query: 332    tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
              ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 108890 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 108831

                                            
Query: 392    gtggcagttgcactacaaaagaatcgagga 421
              |||||||||||||||||||||||| |||||
Sbjct: 108830 gtggcagttgcactacaaaagaattgagga 108801



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Minus

                                                                          
Query: 1656   gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
              ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 106156 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 106097

                                                                          
Query: 1716   ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
              || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 106096 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 106037

                                                                          
Query: 1776   gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
              || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 106036 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 105977

                                                                          
Query: 1836   gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
              ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 105976 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 105917

                                            
Query: 1896   cagattgatcaactgagaatattttttgat 1925
              || |||||||| ||| |||||| |||||||
Sbjct: 105916 caaattgatcagctgcgaatatattttgat 105887



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 2112   ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
              ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 105700 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 105646



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                          
Query: 2831   tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
              |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 105008 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 104949

                  
Query: 2891   taac 2894
              ||||
Sbjct: 104948 taac 104945



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 3043   ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
              |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 104796 ccagcagtactttcaccactccctttccttttcctggaaaaca 104754



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 1152   tttgttaggctcaatggaattcttttcacaa 1182
              |||||| | ||||||||||||||||||||||
Sbjct: 106742 tttgttcgcctcaatggaattcttttcacaa 106712



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 3386   tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
              |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 104350 tttcttttggaagatgcttgtcttggaagcataacaagtgct 104309



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                          
Query: 759    cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
              |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 108484 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 108425

                                
Query: 819    ggcaatccacaccatcag 836
              ||||| ||||| ||||||
Sbjct: 108424 ggcaacccacatcatcag 108407



to top

>dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C07, full
            insert sequence
          Length = 3365

 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1321 ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
            |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 757  ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 816

                                                                        
Query: 1381 ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
            |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 817  ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 876

                                                                        
Query: 1441 ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
            ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 877  ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 936

                                                                        
Query: 1501 cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
            |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 937  cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 996

                                                      
Query: 1561 agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
            ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 997  agatggatgaaaagcaagccgatgcaagatctttcttctgga 1038



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1656 gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
            ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 1092 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 1151

                                                                        
Query: 1716 ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
            || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 1152 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 1211

                                                                        
Query: 1776 gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
            || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 1212 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 1271

                                                                        
Query: 1836 gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
            ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 1272 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 1331

                                          
Query: 1896 cagattgatcaactgagaatattttttgat 1925
            || |||||||| ||| |||||| |||||||
Sbjct: 1332 caaattgatcagctgcgaatatattttgat 1361



 Score = 63.9 bits (32), Expect = 4e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 1152 tttgttaggctcaatggaattcttttcacaaagaccagtttggaaacatttg 1203
            |||||| | |||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 588  tttgttcgcctcaatggaattcttttcacaaggacaagcttggaaacatttg 639



 Score = 61.9 bits (31), Expect = 2e-05
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 759 cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
           |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 183 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 242

                                      
Query: 819 ggcaatccacaccatcagcttgcaata 845
           ||||| ||||| |||||||||||||||
Sbjct: 243 ggcaacccacatcatcagcttgcaata 269



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 2112 ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
            ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 1548 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 1602



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2831 tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
            |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 2240 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 2299

                
Query: 2891 taac 2894
            ||||
Sbjct: 2300 taac 2303



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 3043 ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
            |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 2452 ccagcagtactttcaccactccctttccttttcctggaaaaca 2494



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 3386 tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
            |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 2771 tttcttttggaagatgcttgtcttggaagcataacaagtgct 2812



to top

>dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H17, full
           insert sequence
          Length = 4003

 Score =  147 bits (74), Expect = 4e-31
 Identities = 131/150 (87%)
 Strand = Plus / Plus

                                                                       
Query: 272 gtcagcacagtccaaagtcccatcagatcccaacatatggcttcagatgcgtgagaactt 331
           |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| 
Sbjct: 426 gtcagcacagtccaaagtgccatcagatcctaacatatggtttcagatgcgtgagaacta 485

                                                                       
Query: 332 tgagaaaatgattctggcagatcatgacttttgtgaaaagcatgagatcgagtatatttt 391
           ||| || || || || || ||||||||||| | |||||| | |||||| || ||| || |
Sbjct: 486 tgaaaagataatccttgctgatcatgacttctctgaaaaacgtgagatagaatatcttct 545

                                         
Query: 392 gtggcagttgcactacaaaagaatcgagga 421
           |||||||||||||||||||||||| |||||
Sbjct: 546 gtggcagttgcactacaaaagaattgagga 575



 Score =  147 bits (74), Expect = 4e-31
 Identities = 230/282 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1321 ttgcaatccttatattcacagtgcacaacgtgaaaaaggaatcagataaccagtcatatg 1380
            |||| ||||||||||||||||||||||| |  || || ||  ||||||| || |||||||
Sbjct: 1466 ttgctatccttatattcacagtgcacaatgcaaacaaagacgcagataatcaatcatatg 1525

                                                                        
Query: 1381 ctgaaattgtccaacgcagggtacttcttcaaaatgcatttacagctgcttttgagtttg 1440
            |||||||||| |||||||| || |||||||||||||||||| | || || ||||| ||||
Sbjct: 1526 ctgaaattgtgcaacgcagagttcttcttcaaaatgcatttgctgcagcctttgaatttg 1585

                                                                        
Query: 1441 ttggacatattctcaaaaggtgctcagagcttcgtgacattgcatcaagtttctatcttc 1500
            ||||| |  |||||||||| ||| ||||||||| |||  ||||||||||| ||||  | |
Sbjct: 1586 ttggataccttctcaaaagatgcgcagagcttcatgatgttgcatcaagtatctacttgc 1645

                                                                        
Query: 1501 cagccattgtggtctacatcgaatggctcgcatgccaaccggagttagctgctgattcgg 1560
            |||| ||| |||||| ||| |||||||| || ||||| || || || |  |||  ||| |
Sbjct: 1646 cagctattttggtcttcattgaatggctggcgtgccatccagattttgtggctagttctg 1705

                                                      
Query: 1561 agatggacgagaagcatgcgaatgctcgatctttcttctgga 1602
            ||||||| || ||||| ||  ||||  |||||||||||||||
Sbjct: 1706 agatggatgaaaagcaagccgatgcaagatctttcttctgga 1747



 Score =  107 bits (54), Expect = 3e-19
 Identities = 216/270 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1656 gatggtgatgatgatgaggcttgcttttttgatatgggcgtgtatgaagagggtgaaact 1715
            ||||||||| |||||||  ||||||||||||| ||||||   ||||| ||||||||||||
Sbjct: 1801 gatggtgataatgatgaaacttgcttttttgacatgggcacatatgaggagggtgaaact 1860

                                                                        
Query: 1716 ggcaatcgacttgcattgtgggaagattatgaattaaggggattttcccccttggtgcct 1775
            || ||  | ||||| |||||||| |||  ||| ||||| || ||||| || ||||| |||
Sbjct: 1861 gggaacaggcttgcgttgtgggaggatgttgagttaagagggttttcgcctttggtacct 1920

                                                                        
Query: 1776 gcacatattatcttggatttctcaagcaagcacacatttggaagtgatggtagcactaag 1835
            || ||   ||||||||| ||||| | ||||||    ||||||||||||||  | || |||
Sbjct: 1921 gctcaaggtatcttggacttctccaccaagcaaggttttggaagtgatggaggtaccaag 1980

                                                                        
Query: 1836 gagaagaaagcacgggcacaacggatactttctgcagggaaggctctactcaattttgtc 1895
            ||||| |||||||| | | || |||| ||| ||||||||||||| ||  | ||||| || 
Sbjct: 1981 gagaaaaaagcacgtgtagaaaggattcttgctgcagggaaggcgctgttaaatttcgtt 2040

                                          
Query: 1896 cagattgatcaactgagaatattttttgat 1925
            || |||||||| ||| |||||| |||||||
Sbjct: 2041 caaattgatcagctgcgaatatattttgat 2070



 Score = 63.9 bits (32), Expect = 4e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 1152 tttgttaggctcaatggaattcttttcacaaagaccagtttggaaacatttg 1203
            |||||| | |||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 1297 tttgttcgcctcaatggaattcttttcacaaggacaagcttggaaacatttg 1348



 Score = 61.9 bits (31), Expect = 2e-05
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 759 cgtgaatatgctgcggcttctaattactacaaggaggcagtttcaatctgcccttccagc 818
           |||||||||||||| || ||||  ||||||||||| |||| |||  | |||||||| |  
Sbjct: 892 cgtgaatatgctgcagcctctatctactacaaggaagcagcttcgctgtgcccttcgaat 951

                                      
Query: 819 ggcaatccacaccatcagcttgcaata 845
           ||||| ||||| |||||||||||||||
Sbjct: 952 ggcaacccacatcatcagcttgcaata 978



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 2112 ggagaagatgatgaagaaattgttttcaaacctacagtatctgagaagctcccga 2166
            ||||| |||||||||||||| |||||||| ||| |||| ||||| ||||| ||||
Sbjct: 2257 ggagatgatgatgaagaaatagttttcaagcctccagtttctgaaaagcttccga 2311



 Score = 48.1 bits (24), Expect = 0.25
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2831 tgtatcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatt 2890
            |||||||||||| |||||||| || |||||   ||| |  ||||| ||||||||||||||
Sbjct: 2949 tgtatcaaagaaaaatcctgtcagccgtcctggaagacatgttggccctcctccaggatt 3008

                
Query: 2891 taac 2894
            ||||
Sbjct: 3009 taac 3012



 Score = 46.1 bits (23), Expect = 0.97
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 3043 ccagcagtgcattcaccactcccttccctttccctgggaaaca 3085
            |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 3161 ccagcagtactttcaccactccctttccttttcctggaaaaca 3203



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 3386 tttcttttggagaatggtggtcttggaagcatagcaagtgct 3427
            |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 3481 tttcttttggaagatgcttgtcttggaagcataacaagtgct 3522



to top

>gb|AY107437.1| Zea mays PCO062669 mRNA sequence
          Length = 1217

 Score = 85.7 bits (43), Expect = 1e-12
 Identities = 139/171 (81%)
 Strand = Plus / Plus

                                                                        
Query: 2835 tcaaagaagaatcctgtaagtcgtccatcaaggcccgttggtcctcctccaggatttaac 2894
            ||||||||||| ||||| ||||||||||||| ||| ||||| || |||||||||||| | 
Sbjct: 87   tcaaagaagaaccctgttagtcgtccatcaaagcctgttgggccacctccaggatttgat 146

                                                                        
Query: 2895 cacatcactccaaaacgccatgatgatattatgccatttgagaagctgcagcaccaacag 2954
            ||  |  | ||||| ||||| ||||||  ||| ||| |||| || ||||||  || ||||
Sbjct: 147  catgtagccccaaagcgccaagatgattctattccagttgaaaaactgcagatcccacag 206

                                                               
Query: 2955 atcgatgattacagctggctggatggttaccagccatcaatggaacatgtt 3005
             | ||||||||||||||||| |||||||| |||| ||| || || ||||||
Sbjct: 207  gttgatgattacagctggctagatggttatcagcaatcgattgatcatgtt 257



 Score = 56.0 bits (28), Expect = 0.001
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3379 tgttaaatttcttttggagaatggtggtcttggaagcatagcaagtgctgctgttaggtt 3438
            |||||||||||||||| || ||||||||||| |||||||  |||  |||||| |||||||
Sbjct: 617  tgttaaatttcttttg-agcatggtggtctttgaagcatgacaatggctgctcttaggtt 675

                
Query: 3439 tggg 3442
            ||||
Sbjct: 676  tggg 679



 Score = 54.0 bits (27), Expect = 0.004
 Identities = 134/169 (79%), Gaps = 3/169 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3044 cagcagtgcattcaccactcccttccctttccctgggaaacagcaggtttctggggtgca 3103
            ||||| ||||||  ||||||| ||||| |||||||||||||| ||| | |||||| ||||
Sbjct: 294  cagcactgcatttgccactccattccccttccctgggaaacaacagttatctgggatgca 353

                                                                        
Query: 3104 caccctagggg---ccagtgagaaaacatggcaagatttccacctttttgaccctgcaaa 3160
              | | |||||   | | ||| || ||||||||||||||||  |||||||| ||| ||||
Sbjct: 354  tgcacaaggggctacaaatgaaaagacatggcaagatttccgtctttttgagccttcaaa 413

                                                             
Query: 3161 gcagaatatggttcaaaaccaccaacaaattaatcagcacagtggtcaa 3209
             ||||| ||| | |||||  |||| ||||  |||||||| | |||||||
Sbjct: 414  acagaacatgctccaaaattaccaccaaagaaatcagcaaaatggtcaa 462



to top

>dbj|AB041352.1| Nicotiana tabacum cig3 mRNA, complete cds
          Length = 3333

 Score = 54.0 bits (27), Expect = 0.004
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 1404 cttcttcaaaatgcatttacagctgcttttgagtt 1438
            ||||| |||||||||||||| ||||||||||||||
Sbjct: 1035 cttctacaaaatgcatttactgctgcttttgagtt 1069



 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3065 cttccctttccctgggaaacag 3086
            ||||||||||||||||||||||
Sbjct: 2570 cttccctttccctgggaaacag 2591



to top

>ref|NM_121945.3| Arabidopsis thaliana unknown protein (AT5G19400) mRNA, complete cds
          Length = 3919

 Score = 50.1 bits (25), Expect = 0.062
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 933 gacaacttgattcttgcttttgagaagaatcgccaga 969
           |||||||||||| |||||||||| |||||||| ||||
Sbjct: 926 gacaacttgattgttgcttttgataagaatcgtcaga 962



to top

>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence
          Length = 210696

 Score = 50.1 bits (25), Expect = 0.062
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 544    gcttctatcatgacttgatgttcaa 568
              |||||||||||||||||||||||||
Sbjct: 142783 gcttctatcatgacttgatgttcaa 142807



to top

>ref|NM_001021825.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC14C8.14c),
            partial mRNA
          Length = 2880

 Score = 50.1 bits (25), Expect = 0.062
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 2648 tggattacagtcaattgtatattct 2672
            |||||||||||||||||||||||||
Sbjct: 321  tggattacagtcaattgtatattct 345



to top

>emb|AL022305.1|SPBC14C8 S.pombe chromosome II cosmid c14C8
          Length = 34051

 Score = 50.1 bits (25), Expect = 0.062
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 2648  tggattacagtcaattgtatattct 2672
             |||||||||||||||||||||||||
Sbjct: 25039 tggattacagtcaattgtatattct 25015



to top

>dbj|AB012696.1| Schizosaccharomyces pombe pol5+ mRNA for DNA polymerase V, complete
            cds
          Length = 2880

 Score = 50.1 bits (25), Expect = 0.062
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 2648 tggattacagtcaattgtatattct 2672
            |||||||||||||||||||||||||
Sbjct: 321  tggattacagtcaattgtatattct 345



to top

>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the
            complete sequence
          Length = 249943

 Score = 48.1 bits (24), Expect = 0.25
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 2114 agaagatgatgaagaaattgtttt 2137
            ||||||||||||||||||||||||
Sbjct: 681  agaagatgatgaagaaattgtttt 658



to top

>ref|XM_633680.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0185867)
            mRNA, complete cds
          Length = 1230

 Score = 46.1 bits (23), Expect = 0.97
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 1655 tgatggtgatgatgatgaggcttgctttttt 1685
            ||||| |||||||||||||| ||||||||||
Sbjct: 990  tgatgatgatgatgatgaggattgctttttt 960



to top

>emb|CT025525.8| Mouse DNA sequence from clone RP23-285C6 on chromosome 14, complete
              sequence
          Length = 194278

 Score = 46.1 bits (23), Expect = 0.97
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 1650   tccattgatggtgatgatgatga 1672
              |||||||||||||||||||||||
Sbjct: 111763 tccattgatggtgatgatgatga 111741



to top

>gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, complete sequence
          Length = 184121

 Score = 46.1 bits (23), Expect = 0.97
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 1429 cttttgagtttgttggacatatt 1451
            |||||||||||||||||||||||
Sbjct: 7433 cttttgagtttgttggacatatt 7411



to top

>emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in linkage group 24,
             complete sequence
          Length = 167578

 Score = 46.1 bits (23), Expect = 0.97
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1800  agcaagcacacatttggaagtga 1822
             |||||||||||||||||||||||
Sbjct: 52131 agcaagcacacatttggaagtga 52153



to top

>gb|AC154259.1| Mus musculus BAC clone RP24-220E4 from 14, complete sequence
          Length = 162752

 Score = 46.1 bits (23), Expect = 0.97
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1650 tccattgatggtgatgatgatga 1672
            |||||||||||||||||||||||
Sbjct: 4963 tccattgatggtgatgatgatga 4985



to top

>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5)
          Length = 893329

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 937    acttgattcttgcttttgagaa 958
              ||||||||||||||||||||||
Sbjct: 708876 acttgattcttgcttttgagaa 708897



to top

>ref|NM_117531.2| Arabidopsis thaliana unknown protein (AT4G14510) mRNA, complete cds
          Length = 3015

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 2108 cgagggagaagatgatgaagaa 2129
            ||||||||||||||||||||||
Sbjct: 2724 cgagggagaagatgatgaagaa 2745



to top

>gb|AC135736.6| Mus musculus BAC clone RP23-251A14 from chromosome 16, complete sequence
          Length = 193253

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1403   acttcttcaaaatgcatttaca 1424
              ||||||||||||||||||||||
Sbjct: 180333 acttcttcaaaatgcatttaca 180312



to top

>gb|AC122392.3| Mus musculus BAC clone RP24-81I14 from chromosome 16, complete sequence
          Length = 195550

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1403  acttcttcaaaatgcatttaca 1424
             ||||||||||||||||||||||
Sbjct: 37127 acttcttcaaaatgcatttaca 37106



to top

>gb|AC145338.7| Pan troglodytes clone rp43-47g15, complete sequence
          Length = 202653

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 457  catctcagaatggtaagaacaatgcc 482
            ||||||||||||| ||||||||||||
Sbjct: 6877 catctcagaatgggaagaacaatgcc 6852



to top

>emb|Z82182.2|HSE90C2 Human DNA sequence from clone LL22NC01-90C2 on chromosome 22 Contains
            an STSs and GSSs, complete sequence
          Length = 39004

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 457  catctcagaatggtaagaacaatgcc 482
            ||||||||||||| ||||||||||||
Sbjct: 3594 catctcagaatgggaagaacaatgcc 3569



to top

>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1
          Length = 206606

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2108  cgagggagaagatgatgaagaa 2129
             ||||||||||||||||||||||
Sbjct: 95568 cgagggagaagatgatgaagaa 95547



to top

>emb|AL670001.1|NCB14H13 Neurospora crassa DNA linkage group II BAC clone B14H13
          Length = 67890

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1655  tgatggtgatgatgatgaggct 1676
             ||||||||||||||||||||||
Sbjct: 61496 tgatggtgatgatgatgaggct 61517



to top

>emb|AL670543.1|NCB7K22 Neurospora crassa DNA linkage group II BAC clone B7K22
          Length = 88306

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1655  tgatggtgatgatgatgaggct 1676
             ||||||||||||||||||||||
Sbjct: 26891 tgatggtgatgatgatgaggct 26912



to top

>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39
          Length = 197976

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2108  cgagggagaagatgatgaagaa 2129
             ||||||||||||||||||||||
Sbjct: 41064 cgagggagaagatgatgaagaa 41043



to top

>emb|BX323447.11| Zebrafish DNA sequence from clone DKEY-115J5 in linkage group 18,
             complete sequence
          Length = 27796

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 290   cccatcagatcccaacatatgg 311
             ||||||||||||||||||||||
Sbjct: 10249 cccatcagatcccaacatatgg 10228



to top

>ref|XM_950914.1| Neurospora crassa OR74A hypothetical protein (NCU01639.1) partial
            mRNA
          Length = 258

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1655 tgatggtgatgatgatgaggct 1676
            ||||||||||||||||||||||
Sbjct: 108  tgatggtgatgatgatgaggct 129



to top

>emb|BX470218.10| Zebrafish DNA sequence from clone DKEY-30C15 in linkage group 18,
             complete sequence
          Length = 197774

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 290   cccatcagatcccaacatatgg 311
             ||||||||||||||||||||||
Sbjct: 19672 cccatcagatcccaacatatgg 19693



to top

>emb|Z81097.1|CEK07A1 Caenorhabditis elegans Cosmid K07A1, complete sequence
          Length = 39086

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 977   acagctgccaatcaacaacaaa 998
             ||||||||||||||||||||||
Sbjct: 17561 acagctgccaatcaacaacaaa 17540



to top

>gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosome 13, complete sequence
          Length = 206286

 Score = 44.1 bits (22), Expect = 3.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1242   ctcctctcttctggtccaaatg 1263
              ||||||||||||||||||||||
Sbjct: 121230 ctcctctcttctggtccaaatg 121209


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 754,947,172
Number of extensions: 40235855
Number of successful extensions: 256749
Number of sequences better than 10.0: 36
Number of HSP's gapped: 256716
Number of HSP's successfully gapped: 104
Length of query: 3941
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3917
Effective length of database: 18,499,340,271
Effective search space: 72461915841507
Effective search space used: 72461915841507
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
to top