ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3n05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073592.1| Oryza sativa (japonica cultivar-group) Os12g0567200 (Os12g0567200) mRNA, complete cds Length = 1065 Score = 977 bits (493), Expect = 0.0 Identities = 811/917 (88%) Strand = Plus / Plus Query: 185 cgatggccgtatccaccccaaggtcgccatccgccgcctcgttcctcgagcgccgcgagt 244 |||||||||| |||||||| |||||| | |||||||| ||||||||||||||||||||| Sbjct: 137 cgatggccgtgtccacccccaggtcggccgccgccgccgcgttcctcgagcgccgcgagt 196 Query: 245 ccgagcgcgccctccacttcgtcaagtaccagggcctcggcaacgacttcataatggtcg 304 | ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| | Sbjct: 197 cggagcgcgccctccacttcgtcaagtaccagggccttgggaacgacttcatcatggtgg 256 Query: 305 acaacagggattcggcagtgcccaaggtgacgccagaggaggcggcgaagctgtgcgaca 364 |||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 257 acaatagggattcggccgtgccgaaggtgacgccggaggaggcggcgaagctgtgcgaca 316 Query: 365 gaaactttggtgttggtgctgatggcgtcatcttcgtcatgccggggatcaacggtgcgg 424 | ||||| || || || || || || || |||||||||||||||||| |||| || |||| Sbjct: 317 ggaacttcggcgtcggcgccgacggtgtgatcttcgtcatgccgggggtcaatggcgcgg 376 Query: 425 actacactatgaggatattcaactccgatggcagcgagcctgagatgtgtggcaatggag 484 ||||||| |||||||| |||||||| || ||||| ||||| ||||||||||||||||||| Sbjct: 377 actacaccatgaggatcttcaactcggacggcagtgagccggagatgtgtggcaatggag 436 Query: 485 ttcgttgcttcgctcgctttatagcggaggttgaaaatcttcagggaacacatagcttca 544 | |||||||| || || |||||||| ||| ||||||| || ||||||||||||||||||| Sbjct: 437 tccgttgctttgcccggtttatagctgagcttgaaaacctacagggaacacatagcttca 496 Query: 545 aaattcatactggggctggattaattatccctgaaatacaagatgatggaaaggttaagg 604 ||||||| ||||| ||||| |||| || |||||||||||| ||||||| ||||| |||| Sbjct: 497 aaattcacactggcgctgggctaatcattcctgaaatacaaaatgatggcaaggtaaagg 556 Query: 605 ttgatatgggccaacccattctgcatggaccagatgttcccacaaaactgccatccacca 664 ||||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||| Sbjct: 557 ttgatatgggccagcccattctctctggaccagatattccaacaaaactgccatccacca 616 Query: 665 ggaatgaagctgttgttcaagctgaactggcaattgacgggtcaacatggcatgcaacct 724 ||||||||| ||||| |||||||| ||||| |||| || ||||||||||| | ||||| Sbjct: 617 agaatgaagccgttgtccaagctgatttggcagttgatggctcaacatggcaagtaacct 676 Query: 725 gtgttagcatgggcaatcctcattgcgtcacgtttggttcaaaagagttaaaggttctgc 784 ||||||||||||||||||| ||||| ||||| ||||| |||| ||| | |||||| ||| Sbjct: 677 gtgttagcatgggcaatccacattgtgtcacatttggcacaaaggagctcaaggttttgc 736 Query: 785 aggttgatgatctgaagcttagtgatattgggcccaaatttgagcatcatgaaatgtttc 844 | ||||||||| | |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 737 atgttgatgatttaaagcttagtgatattgggcctaaattcgagcatcatgaaatgtttc 796 Query: 845 ctgctcggaccaacactgagtttgtacaggtcttgtctcgttcacacctcaaaatgcgag 904 |||| || |||||||| || |||||| ||||| ||||||| ||||||||||||||| ||| Sbjct: 797 ctgcccgcaccaacacagaatttgtagaggtcctgtctcgctcacacctcaaaatgagag 856 Query: 905 tttgggagcgcggtgctggagcaactcttgcttgtgggactggtgcttgtgcagttgttg 964 | |||||||| |||||||| || || ||||||||||| || |||||||||||||| |||| Sbjct: 857 tctgggagcgtggtgctggtgcgacgcttgcttgtggaaccggtgcttgtgcagtagttg 916 Query: 965 ttgcagctgttcttgagggccgagctgaacggaaatgtatagttgatttgcctggtgggc 1024 |||||||||| || ||||| |||||||||||||||||| ||||||||||||||||||| | Sbjct: 917 ttgcagctgtcctcgagggtcgagctgaacggaaatgtgtagttgatttgcctggtggac 976 Query: 1025 cattggaaattgaatggagggaggataacaatcatgtttacatgactggtcctgcggagg 1084 |||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||| Sbjct: 977 cattggaaatcgaatggagggaggatgacaatcatatttacatgactggtcctgcagagg 1036 Query: 1085 ctgtcttctacggatct 1101 |||||||||| |||||| Sbjct: 1037 ctgtcttctatggatct 1053
>gb|AY104119.1| Zea mays PCO102509 mRNA sequence Length = 1191 Score = 591 bits (298), Expect = e-165 Identities = 568/658 (86%) Strand = Plus / Plus Query: 466 gagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatctt 525 ||||||||||| |||||||| |||||||||||||| |||||||| ||| |||||||||| Sbjct: 16 gagatgtgtggtaatggagtccgttgcttcgctcggtttatagccgagattgaaaatctg 75 Query: 526 cagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatacaa 585 ||||| ||| |||| |||| ||||||||||| |||||| || | |||||||||||| Sbjct: 76 caggggacaaatagattcactattcatactggtgctggaaagatcgttcctgaaatacaa 135 Query: 586 gatgatggaaaggttaaggttgatatgggccaacccattctgcatggaccagatgttccc 645 |||||| |||| ||||||||||||||| | || || || ||||| ||| | ||| Sbjct: 136 agtgatgggcaggtaaaggttgatatgggcgagcctatcctttctggactagacatcccc 195 Query: 646 acaaaactgccatccaccaggaatgaagctgttgttcaagctgaactggcaattgacggg 705 |||||||||| | | |||| ||| |||||||||||||||||||| ||||| |||| || Sbjct: 196 acaaaactgctagctaccaagaacaaagctgttgttcaagctgaattggcagttgagggc 255 Query: 706 tcaacatggcatgcaacctgtgttagcatgggcaatcctcattgcgtcacgtttggttca 765 | ||||||||||| || |||||||||||||| || ||||| || ||||| |||||| || Sbjct: 256 ttaacatggcatgtcacatgtgttagcatgggaaaccctcactgtgtcacatttggtgca 315 Query: 766 aaagagttaaaggttctgcaggttgatgatctgaagcttagtgatattgggcccaaattt 825 || ||||||||||| ||||||| || ||| | || ||||| || |||||||| |||||| Sbjct: 316 aatgagttaaaggtattgcaggtcgacgatttaaaacttagcgaaattgggcctaaattt 375 Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||| Sbjct: 376 gagcatcatgaaatgtttcctgctcgcacaaacacagagtttgtacaggttttgtctcgc 435 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| ||| Sbjct: 436 tcacacctcaaaatgcgagtctgggaacgtggtgctggagcaactcttgcctgtggtact 495 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagctgaacggaaatgtata 1005 ||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||| || Sbjct: 496 ggtgcttgtgcggtggttgttgcagctgttcttgagggtcgagctgagcggaaatgtgta 555 Query: 1006 gttgatttgcctggtgggccattggaaattgaatggagggaggataacaatcatgtttac 1065 |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 556 gttgatttgcctggcgggccattggaaattgagtggagggaggatgacaatcatgtttac 615 Query: 1066 atgactggtcctgcggaggctgtcttctacggatctattgtacactaggtgctgggga 1123 |||||||||||||| ||||| ||||| || |||||| |||| |||||||| ||||||| Sbjct: 616 atgactggtcctgcagaggccgtcttttatggatctgttgttcactaggtactgggga 673
>gb|AY107862.1| Zea mays PCO103913 mRNA sequence Length = 586 Score = 392 bits (198), Expect = e-105 Identities = 341/389 (87%) Strand = Plus / Plus Query: 169 cgccgcgccgtcgcttcgatggccgtatccaccccaaggtcgccatccgccgcctcgttc 228 |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||| Sbjct: 194 cgccgcgccgtcgcttcgatggccgtgtccgcccccaggtccggcgccgccgcctcgttc 253 Query: 229 ctcgagcgccgcgagtccgagcgcgccctccacttcgtcaagtaccagggcctcggcaac 288 || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 254 ctggagcgccgcgagtccgagcgcgctctccacttcgtcaagtaccagggcctcggcaat 313 Query: 289 gacttcataatggtcgacaacagggattcggcagtgcccaaggtgacgccagaggaggcg 348 |||||||| ||||| ||||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 314 gacttcattatggtggacaacagggattcgtcggtgccgaaggtgacgccggaggaggcc 373 Query: 349 gcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtcatgccg 408 ||||||||||||||| ||||||| || ||||||| || |||||||||||||||||||| Sbjct: 374 gcgaagctgtgcgaccgaaacttcggcattggtgccgacggcgtcatcttcgtcatgcca 433 Query: 409 gggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagcctgag 468 ||| |||| | ||| |||||||| |||||||| |||||||| || ||||||||||| || Sbjct: 434 ggggtcaatgatgccgactacaccatgaggatcttcaactctgacggcagcgagccaaag 493 Query: 469 atgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatcttcag 528 |||||||| |||||||| |||||||| ||||| ||||||| || |||||||||| ||| Sbjct: 494 atgtgtggtaatggagtccgttgctttgctcggtttataggcgaacttgaaaatctgcag 553 Query: 529 ggaacacatagcttcaaaattcatactgg 557 || ||||||| ||||| ||||||||||| Sbjct: 554 gggacacatancttcactattcatactgg 582
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 170 bits (86), Expect = 9e-39 Identities = 146/166 (87%) Strand = Plus / Plus Query: 596 aggttaaggttgatatgggccaacccattctgcatggaccagatgttcccacaaaactgc 655 |||| ||||||||||||||||| |||||||| |||||||||| |||| |||||||||| Sbjct: 23354115 aggtaaaggttgatatgggccagcccattctctctggaccagatattccaacaaaactgc 23354174 Query: 656 catccaccaggaatgaagctgttgttcaagctgaactggcaattgacgggtcaacatggc 715 ||||||||| ||||||||| ||||| |||||||| ||||| |||| || |||||||||| Sbjct: 23354175 catccaccaagaatgaagccgttgtccaagctgatttggcagttgatggctcaacatggc 23354234 Query: 716 atgcaacctgtgttagcatgggcaatcctcattgcgtcacgtttgg 761 | | |||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 23354235 aagtaacctgtgttagcatgggcaatccacattgtgtcacatttgg 23354280 Score = 159 bits (80), Expect = 3e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 996 gaaatgtatagttgatttgcctggtgggccattggaaattgaatggagggaggataacaa 1055 ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| Sbjct: 23355581 gaaatgtgtagttgatttgcctggtggaccattggaaatcgaatggagggaggatgacaa 23355640 Query: 1056 tcatgtttacatgactggtcctgcggaggctgtcttctacggatctattgtacactaggt 1115 |||| ||||||||||||||||||| |||||||||||||| |||||| ||| |||||||| Sbjct: 23355641 tcatatttacatgactggtcctgcagaggctgtcttctatggatctgctgttcactaggt 23355700 Score = 155 bits (78), Expect = 5e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 185 cgatggccgtatccaccccaaggtcgccatccgccgcctcgttcctcgagcgccgcgagt 244 |||||||||| |||||||| |||||| | |||||||| ||||||||||||||||||||| Sbjct: 23351920 cgatggccgtgtccacccccaggtcggccgccgccgccgcgttcctcgagcgccgcgagt 23351979 Query: 245 ccgagcgcgccctccacttcgtcaagtaccagggcctcggcaacgacttcataatggt 302 | ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 23351980 cggagcgcgccctccacttcgtcaagtaccagggccttgggaacgacttcatcatggt 23352037 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Plus Query: 304 gacaacagggattcggcagtgcccaaggtgacgccagaggaggcggcgaagctgtgcgac 363 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 23352222 gacaatagggattcggccgtgccgaaggtgacgccggaggaggcggcgaagctgtgcgac 23352281 Query: 364 agaaactttggtgttggtgctgatggcgtcatcttcgtcatgccggggatcaacggtgcg 423 || ||||| || || || || || || || |||||||||||||||||| |||| || ||| Sbjct: 23352282 aggaacttcggcgtcggcgccgacggtgtgatcttcgtcatgccgggggtcaatggcgcg 23352341 Query: 424 gactacactatgaggatattcaactccgatggcagcgagcc 464 |||||||| |||||||| |||||||| || ||||| ||||| Sbjct: 23352342 gactacaccatgaggatcttcaactcggacggcagtgagcc 23352382 Score = 105 bits (53), Expect = 4e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 776 aggttctgcaggttgatgatctgaagcttagtgatattgggcccaaatttgagcatcatg 835 ||||| |||| ||||||||| | |||||||||||||||||||| ||||| |||||||||| Sbjct: 23354917 aggttttgcatgttgatgatttaaagcttagtgatattgggcctaaattcgagcatcatg 23354976 Query: 836 aaatgtttcctgctcggaccaacac 860 ||||||||||||| || |||||||| Sbjct: 23354977 aaatgtttcctgcccgcaccaacac 23355001 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 931 cttgcttgtgggactggtgcttgtgcagttgttgttgcagctgttcttgagggccgagct 990 ||||||||||| || |||||||||||||| |||||||||||||| || ||||| |||||| Sbjct: 23355418 cttgcttgtggaaccggtgcttgtgcagtagttgttgcagctgtcctcgagggtcgagct 23355477 Query: 991 gaacgg 996 |||||| Sbjct: 23355478 gaacgg 23355483 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 467 agatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatcttc 526 ||||||||||||||||||| |||||||| || || |||||||| ||| ||||||| || | Sbjct: 23353158 agatgtgtggcaatggagtccgttgctttgcccggtttatagctgagcttgaaaacctac 23353217 Query: 527 agggaacacatag 539 ||||||||||||| Sbjct: 23353218 agggaacacatag 23353230 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 865 tttgtacaggtcttgtctcgttcacacctcaaaatgcgagtttgggagcgcggtgctgg 923 |||||| ||||| ||||||| ||||||||||||||| |||| |||||||| |||||||| Sbjct: 23355093 tttgtagaggtcctgtctcgctcacacctcaaaatgagagtctgggagcgtggtgctgg 23355151 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 538 agcttcaaaattcatactggggctggattaattatccctgaaatacaagatgatggaaag 597 |||||||||||||| ||||| ||||| |||| || |||||||||||| ||||||| ||| Sbjct: 23353442 agcttcaaaattcacactggcgctgggctaatcattcctgaaatacaaaatgatggcaag 23353501 Query: 598 gt 599 || Sbjct: 23353502 gt 23353503 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccgccgccgccgccagagtca 82 ||||||||||||||||||||| Sbjct: 19347975 ccgccgccgccgccagagtca 19347995
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 170 bits (86), Expect = 9e-39 Identities = 146/166 (87%) Strand = Plus / Plus Query: 596 aggttaaggttgatatgggccaacccattctgcatggaccagatgttcccacaaaactgc 655 |||| ||||||||||||||||| |||||||| |||||||||| |||| |||||||||| Sbjct: 167233 aggtaaaggttgatatgggccagcccattctctctggaccagatattccaacaaaactgc 167292 Query: 656 catccaccaggaatgaagctgttgttcaagctgaactggcaattgacgggtcaacatggc 715 ||||||||| ||||||||| ||||| |||||||| ||||| |||| || |||||||||| Sbjct: 167293 catccaccaagaatgaagccgttgtccaagctgatttggcagttgatggctcaacatggc 167352 Query: 716 atgcaacctgtgttagcatgggcaatcctcattgcgtcacgtttgg 761 | | |||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 167353 aagtaacctgtgttagcatgggcaatccacattgtgtcacatttgg 167398 Score = 155 bits (78), Expect = 5e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 185 cgatggccgtatccaccccaaggtcgccatccgccgcctcgttcctcgagcgccgcgagt 244 |||||||||| |||||||| |||||| | |||||||| ||||||||||||||||||||| Sbjct: 165038 cgatggccgtgtccacccccaggtcggccgccgccgccgcgttcctcgagcgccgcgagt 165097 Query: 245 ccgagcgcgccctccacttcgtcaagtaccagggcctcggcaacgacttcataatggt 302 | ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 165098 cggagcgcgccctccacttcgtcaagtaccagggccttgggaacgacttcatcatggt 165155 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Plus Query: 304 gacaacagggattcggcagtgcccaaggtgacgccagaggaggcggcgaagctgtgcgac 363 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 165340 gacaatagggattcggccgtgccgaaggtgacgccggaggaggcggcgaagctgtgcgac 165399 Query: 364 agaaactttggtgttggtgctgatggcgtcatcttcgtcatgccggggatcaacggtgcg 423 || ||||| || || || || || || || |||||||||||||||||| |||| || ||| Sbjct: 165400 aggaacttcggcgtcggcgccgacggtgtgatcttcgtcatgccgggggtcaatggcgcg 165459 Query: 424 gactacactatgaggatattcaactccgatggcagcgagcc 464 |||||||| |||||||| |||||||| || ||||| ||||| Sbjct: 165460 gactacaccatgaggatcttcaactcggacggcagtgagcc 165500 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 467 agatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatcttc 526 ||||||||||||||||||| |||||||| || || |||||||| ||| ||||||| || | Sbjct: 166276 agatgtgtggcaatggagtccgttgctttgcccggtttatagctgagcttgaaaacctac 166335 Query: 527 agggaacacatag 539 ||||||||||||| Sbjct: 166336 agggaacacatag 166348 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 538 agcttcaaaattcatactggggctggattaattatccctgaaatacaagatgatggaaag 597 |||||||||||||| ||||| ||||| |||| || |||||||||||| ||||||| ||| Sbjct: 166560 agcttcaaaattcacactggcgctgggctaatcattcctgaaatacaaaatgatggcaag 166619 Query: 598 gt 599 || Sbjct: 166620 gt 166621
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 170 bits (86), Expect = 9e-39 Identities = 146/166 (87%) Strand = Plus / Minus Query: 596 aggttaaggttgatatgggccaacccattctgcatggaccagatgttcccacaaaactgc 655 |||| ||||||||||||||||| |||||||| |||||||||| |||| |||||||||| Sbjct: 148044 aggtaaaggttgatatgggccagcccattctctctggaccagatattccaacaaaactgc 147985 Query: 656 catccaccaggaatgaagctgttgttcaagctgaactggcaattgacgggtcaacatggc 715 ||||||||| ||||||||| ||||| |||||||| ||||| |||| || |||||||||| Sbjct: 147984 catccaccaagaatgaagccgttgtccaagctgatttggcagttgatggctcaacatggc 147925 Query: 716 atgcaacctgtgttagcatgggcaatcctcattgcgtcacgtttgg 761 | | |||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 147924 aagtaacctgtgttagcatgggcaatccacattgtgtcacatttgg 147879 Score = 159 bits (80), Expect = 3e-35 Identities = 110/120 (91%) Strand = Plus / Minus Query: 996 gaaatgtatagttgatttgcctggtgggccattggaaattgaatggagggaggataacaa 1055 ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| Sbjct: 146578 gaaatgtgtagttgatttgcctggtggaccattggaaatcgaatggagggaggatgacaa 146519 Query: 1056 tcatgtttacatgactggtcctgcggaggctgtcttctacggatctattgtacactaggt 1115 |||| ||||||||||||||||||| |||||||||||||| |||||| ||| |||||||| Sbjct: 146518 tcatatttacatgactggtcctgcagaggctgtcttctatggatctgctgttcactaggt 146459 Score = 155 bits (78), Expect = 5e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 185 cgatggccgtatccaccccaaggtcgccatccgccgcctcgttcctcgagcgccgcgagt 244 |||||||||| |||||||| |||||| | |||||||| ||||||||||||||||||||| Sbjct: 150239 cgatggccgtgtccacccccaggtcggccgccgccgccgcgttcctcgagcgccgcgagt 150180 Query: 245 ccgagcgcgccctccacttcgtcaagtaccagggcctcggcaacgacttcataatggt 302 | ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 150179 cggagcgcgccctccacttcgtcaagtaccagggccttgggaacgacttcatcatggt 150122 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Minus Query: 304 gacaacagggattcggcagtgcccaaggtgacgccagaggaggcggcgaagctgtgcgac 363 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 149937 gacaatagggattcggccgtgccgaaggtgacgccggaggaggcggcgaagctgtgcgac 149878 Query: 364 agaaactttggtgttggtgctgatggcgtcatcttcgtcatgccggggatcaacggtgcg 423 || ||||| || || || || || || || |||||||||||||||||| |||| || ||| Sbjct: 149877 aggaacttcggcgtcggcgccgacggtgtgatcttcgtcatgccgggggtcaatggcgcg 149818 Query: 424 gactacactatgaggatattcaactccgatggcagcgagcc 464 |||||||| |||||||| |||||||| || ||||| ||||| Sbjct: 149817 gactacaccatgaggatcttcaactcggacggcagtgagcc 149777 Score = 105 bits (53), Expect = 4e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 776 aggttctgcaggttgatgatctgaagcttagtgatattgggcccaaatttgagcatcatg 835 ||||| |||| ||||||||| | |||||||||||||||||||| ||||| |||||||||| Sbjct: 147242 aggttttgcatgttgatgatttaaagcttagtgatattgggcctaaattcgagcatcatg 147183 Query: 836 aaatgtttcctgctcggaccaacac 860 ||||||||||||| || |||||||| Sbjct: 147182 aaatgtttcctgcccgcaccaacac 147158 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 931 cttgcttgtgggactggtgcttgtgcagttgttgttgcagctgttcttgagggccgagct 990 ||||||||||| || |||||||||||||| |||||||||||||| || ||||| |||||| Sbjct: 146741 cttgcttgtggaaccggtgcttgtgcagtagttgttgcagctgtcctcgagggtcgagct 146682 Query: 991 gaacgg 996 |||||| Sbjct: 146681 gaacgg 146676 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 467 agatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatcttc 526 ||||||||||||||||||| |||||||| || || |||||||| ||| ||||||| || | Sbjct: 149001 agatgtgtggcaatggagtccgttgctttgcccggtttatagctgagcttgaaaacctac 148942 Query: 527 agggaacacatag 539 ||||||||||||| Sbjct: 148941 agggaacacatag 148929 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 865 tttgtacaggtcttgtctcgttcacacctcaaaatgcgagtttgggagcgcggtgctgg 923 |||||| ||||| ||||||| ||||||||||||||| |||| |||||||| |||||||| Sbjct: 147066 tttgtagaggtcctgtctcgctcacacctcaaaatgagagtctgggagcgtggtgctgg 147008 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 538 agcttcaaaattcatactggggctggattaattatccctgaaatacaagatgatggaaag 597 |||||||||||||| ||||| ||||| |||| || |||||||||||| ||||||| ||| Sbjct: 148717 agcttcaaaattcacactggcgctgggctaatcattcctgaaatacaaaatgatggcaag 148658 Query: 598 gt 599 || Sbjct: 148657 gt 148656
>ref|NM_115218.2| Arabidopsis thaliana diaminopimelate epimerase (AT3G53580) mRNA, complete cds Length = 1336 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 340 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagtgatttttgcaa 399 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 400 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 459 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 460 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 519 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 520 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 579 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 580 aagatgacggacaggttaaggttgacatggg 610 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 822 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 881 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 882 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 941 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 942 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 985
>gb|AY143871.1| Arabidopsis thaliana At3g53580/F4P12_280 mRNA, complete cds Length = 1089 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 320 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagtgatttttgcaa 379 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 380 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 439 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 440 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 499 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 500 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 559 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 560 aagatgacggacaggttaaggttgacatggg 590 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 802 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 861 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 862 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 921 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 922 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 965
>gb|AY126996.1| Arabidopsis thaliana AT3g53580/F4P12_280 mRNA, complete cds Length = 1279 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 346 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagtgatttttgcaa 405 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 406 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 465 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 466 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 525 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 526 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 585 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 586 aagatgacggacaggttaaggttgacatggg 616 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 828 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 887 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 888 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 947 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 948 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 991
>emb|BX824490.1|CNS0A5M7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1250 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 310 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagtaatttttgcaa 369 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 370 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 429 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 430 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 489 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 490 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 549 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 550 aagatgacggacaggttaaggttgacatggg 580 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 792 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 851 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 852 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 911 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 912 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 955
>emb|BX823864.1|CNS0A5G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1282 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 315 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagtgatttttgcaa 374 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 375 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 434 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 435 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 494 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 495 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 554 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 555 aagatgacggacaggttaaggttgacatggg 585 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 797 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 856 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 857 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 916 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 917 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 960
>emb|BX823665.1|CNS0A5C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1244 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 327 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagtgatttttgcaa 386 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 387 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 446 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 447 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 506 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 507 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 566 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 567 aagatgacggacaggttaaggttgacatggg 597 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 809 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 868 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 869 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 928 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 929 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 972
>emb|BX825393.1|CNS0A53P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1270 Score = 93.7 bits (47), Expect = 2e-15 Identities = 215/271 (79%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 331 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagttatttttgcaa 390 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 391 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 450 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 451 cagagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 510 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 511 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 570 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 571 aagatgacggacaggttaaggttgacatggg 601 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 813 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 872 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 873 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 932 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 933 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 976
>emb|BX824658.1|CNS0A5P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1199 Score = 87.7 bits (44), Expect = 1e-13 Identities = 134/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||| Sbjct: 793 gagcatcatgaaatgttcccagctcgaactaacacagaatttgttgaggtcttatcacgt 852 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 853 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 912 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 913 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 956 Score = 85.7 bits (43), Expect = 4e-13 Identities = 214/271 (78%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatggcgtcatcttcgtca 403 |||||||||||||||| || ||||||| ||||||||||| ||||| || || || | | Sbjct: 311 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatggagttatttttgcaa 370 Query: 404 tgccggggatcaacggtgcggactacactatgaggatattcaactccgatggcagcgagc 463 |||| || |||| ||| | || ||| | ||| |||| ||||| || ||||| || || | Sbjct: 371 tgccaggagtcaatggtactgattacgcaatgcggattttcaattcagatggtagtgaac 430 Query: 464 ctgagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatc 523 | || |||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| Sbjct: 431 cagaaatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatt 490 Query: 524 ttcagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatac 583 | ||||||| |||||| || | ||| ||||| || || || || ||| | || ||||| | Sbjct: 491 tgcagggaaaacatagttttacaatacataccggtgccgggttgattgttccagaaattc 550 Query: 584 aagatgatggaaaggttaaggttgatatggg 614 ||||||| ||| ||||||||||||| ||||| Sbjct: 551 aagatgacggacaggttaaggttgacatggg 581
>emb|BX824557.1|CNS0A5IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1210 Score = 79.8 bits (40), Expect = 2e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 826 gagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtctcgt 885 ||||||||||||||||| || ||||| || ||||| || | ||| ||||||| || ||| Sbjct: 808 gagcatcatgaaatgttcccagctcgaactaacacagaatatgttgaggtcttatcacgt 867 Query: 886 tcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtgggact 945 || || | |||||||| || ||||||||||| || ||||||||| | || ||||| ||| Sbjct: 868 tctcatttgaaaatgcgtgtgtgggagcgcggagcaggagcaactttggcctgtggaact 927 Query: 946 ggtgcttgtgcagttgttgttgcagctgttcttgagggccgagc 989 || |||||||| | ||||||||||| || ||||| || ||||| Sbjct: 928 ggagcttgtgctctggttgttgcagcagtccttgaaggtcgagc 971 Score = 65.9 bits (33), Expect = 4e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 466 gagatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatctt 525 ||||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| | Sbjct: 448 gagatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatttg 507 Query: 526 cagggaacacatagcttcaaaattcatactggggctggattaattatccctgaaatacaa 585 ||||||| |||||| || | ||| ||||| || || || || ||| | || || || ||| Sbjct: 508 cagggaaaacatagttttacaatacataccggtgccgggttgattgttccagatattcaa 567 Query: 586 gatgatggaaaggttaaggttgatatggg 614 ||||| ||| ||||||||||||| ||||| Sbjct: 568 gatgacggacaggttaaggttgacatggg 596 Score = 42.1 bits (21), Expect = 5.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 271 taccagggcctcggcaacgacttcataatggtcgacaacag 311 ||||| ||||||||||| |||||||| ||||||| ||||| Sbjct: 252 taccatggcctcggcaatgacttcattttggtcgataacag 292
>gb|BT012750.1| Lycopersicon esculentum clone 113689R, mRNA sequence Length = 1395 Score = 65.9 bits (33), Expect = 4e-07 Identities = 129/161 (80%) Strand = Plus / Plus Query: 823 tttgagcatcatgaaatgtttcctgctcggaccaacactgagtttgtacaggtcttgtct 882 ||||| |||||||| |||||||||||||| || ||||| || ||||| || || || || Sbjct: 810 tttgaacatcatgagatgtttcctgctcgcacgaacacagaatttgttcaagttttctcc 869 Query: 883 cgttcacacctcaaaatgcgagtttgggagcgcggtgctggagcaactcttgcttgtggg 942 | ||||||| |||||||| || ||||| || ||||| || | || || || |||||| Sbjct: 870 ccaacacaccttaaaatgcgtgtctgggaacgtggtgcaggcgagacactagcctgtggg 929 Query: 943 actggtgcttgtgcagttgttgttgcagctgttcttgaggg 983 || || |||||||| || ||||||||||| || |||||||| Sbjct: 930 acaggagcttgtgccgtagttgttgcagcagtgcttgaggg 970 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 709 acatggcatgcaacctgtgttagcatgggcaatcctcattgcgtcacgtttggt 762 |||||| ||| |||||||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 699 acatggaatgtaacctgtgttagcatggggaatccccattgtgtcacttttggt 752 Score = 58.0 bits (29), Expect = 9e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 574 cctgaaatacaagatgatggaaaggttaaggttgatatggg 614 |||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 564 cctgaaatccaagatgatggaaaggttagggttgacatggg 604 Score = 48.1 bits (24), Expect = 0.086 Identities = 39/44 (88%) Strand = Plus / Plus Query: 265 gtcaagtaccagggcctcggcaacgacttcataatggtcgacaa 308 ||||||||||| ||||| ||||||||||| ||| |||| ||||| Sbjct: 255 gtcaagtaccatggcctgggcaacgactttatattggttgacaa 298
>dbj|AK242455.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080097I19, full insert sequence Length = 571 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1066 atgactggtcctgcggaggctgtcttctacggatctattgtacactaggt 1115 |||||||||||||| |||||||||||||| |||||| ||| |||||||| Sbjct: 2 atgactggtcctgcagaggctgtcttctatggatctgctgttcactaggt 51
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Minus Query: 437 ggatattcaactccgatggcagcgagcctgagatgtgtggcaatgg 482 |||| |||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 203817 ggattttcaacgccgacggcagcgaggcagagatgtgtggcaatgg 203772
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 52.0 bits (26), Expect = 0.006 Identities = 41/46 (89%) Strand = Plus / Plus Query: 344 aggcggcgaagctgtgcgacagaaactttggtgttggtgctgatgg 389 |||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 105879 aggcggcgaagctgtgtgatcgaaacttcggtgttggtgccgatgg 105924 Score = 50.1 bits (25), Expect = 0.022 Identities = 61/73 (83%) Strand = Plus / Plus Query: 467 agatgtgtggcaatggagttcgttgcttcgctcgctttatagcggaggttgaaaatcttc 526 |||||||||||||||||||||| ||||| ||| | || || || ||| |||| ||| | | Sbjct: 106079 agatgtgtggcaatggagttcgatgctttgctaggttcattgctgagcttgagaatttgc 106138 Query: 527 agggaacacatag 539 |||||| |||||| Sbjct: 106139 agggaaaacatag 106151
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 cgagcgccgcgagtccgagcgcgcc 255 ||||||||||||||||||||||||| Sbjct: 294877 cgagcgccgcgagtccgagcgcgcc 294901
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Minus Query: 265 gtcaagtaccagggcctcggcaacgactt 293 ||||||||| ||||||||||||||||||| Sbjct: 871848 gtcaagtacgagggcctcggcaacgactt 871820
>ref|XM_632681.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0186848) mRNA, complete cds Length = 2175 Score = 48.1 bits (24), Expect = 0.086 Identities = 24/24 (100%) Strand = Plus / Plus Query: 83 catccaacttcaccaacttcacca 106 |||||||||||||||||||||||| Sbjct: 1108 catccaacttcaccaacttcacca 1131
>ref|XM_739554.1| Plasmodium chabaudi chabaudi Pc-fam-4 protein (PC104414.00.0) partial mRNA Length = 2118 Score = 48.1 bits (24), Expect = 0.086 Identities = 27/28 (96%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcaccacctccac 113 ||||||||||||||||||||| |||||| Sbjct: 1744 ccaacttcaccaacttcaccaactccac 1771
>ref|XM_735922.1| Plasmodium chabaudi chabaudi Pc-fam-4 protein (PC401554.00.0) partial mRNA Length = 324 Score = 48.1 bits (24), Expect = 0.086 Identities = 27/28 (96%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcaccacctccac 113 ||||||||||||||||||||| |||||| Sbjct: 1 ccaacttcaccaacttcaccaactccac 28
>emb|CT828722.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125P05, full insert sequence Length = 1456 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 55 cgccatgtccgccgccgccgcc 76
>ref|NM_001066662.1| Oryza sativa (japonica cultivar-group) Os07g0586000 (Os07g0586000) mRNA, complete cds Length = 2336 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 82 cgccatgtccgccgccgccgcc 103
>ref|XM_530685.2| PREDICTED: Pan troglodytes hypothetical LOC460993 (LOC460993), mRNA Length = 2179 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 571 atccctgaaatacaagatgatggaaa 596 ||||||||||||||| |||||||||| Sbjct: 1004 atccctgaaatacaatatgatggaaa 979
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1012 ttgcctggtgggccattggaaattgaatgg 1041 ||||||||||| || ||||||||||||||| Sbjct: 3839204 ttgcctggtggccctttggaaattgaatgg 3839233
>gb|AC130209.3| Mus musculus BAC clone RP24-369J19 from chromosome 6, complete sequence Length = 154867 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 861 tgagtttgtacaggtcttgtct 882 |||||||||||||||||||||| Sbjct: 129284 tgagtttgtacaggtcttgtct 129263
>gb|AC166249.3| Mus musculus 10 BAC RP23-411N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203983 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 861 tgagtttgtacaggtcttgtct 882 |||||||||||||||||||||| Sbjct: 65520 tgagtttgtacaggtcttgtct 65499
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence Length = 183101 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 aacttcaccaacttcaccacctccac 113 ||||||||||||||||||| |||||| Sbjct: 149512 aacttcaccaacttcaccaactccac 149537
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 3930872 cgccatgtccgccgccgccgcc 3930893
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 23758845 cgccatgtccgccgccgccgcc 23758824 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 19692463 cgtcgccatggccgccgccgccgcc 19692439
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 13775 cgccatgtccgccgccgccgcc 13754
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 18169 cgccatgtccgccgccgccgcc 18190
>dbj|AK069212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B09, full insert sequence Length = 2337 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cgccatgtccgccgccgccgcc 75 |||||||||||||||||||||| Sbjct: 83 cgccatgtccgccgccgccgcc 104
>emb|CR391945.9| Zebrafish DNA sequence from clone CH211-89I1 in linkage group 6, complete sequence Length = 103052 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 806 gtgatattgggcccaaatttg 826 ||||||||||||||||||||| Sbjct: 30076 gtgatattgggcccaaatttg 30096
>emb|CT832223.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122F15, full insert sequence Length = 1671 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 132 gccatgtccgccgccgccgcc 152
>emb|CR855099.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0096P03, complete sequence Length = 88065 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 45996 cgtcgccatggccgccgccgccgcc 46020
>ref|XM_001220197.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_00977) mRNA, complete cds Length = 2592 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||| |||||||||||||||| Sbjct: 1188 cgtcgccaagtccgccgccgccgcc 1212
>ref|NM_001064758.1| Oryza sativa (japonica cultivar-group) Os06g0650800 (Os06g0650800) mRNA, complete cds Length = 1629 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 99 gccatgtccgccgccgccgcc 119
>ref|NM_001055249.1| Oryza sativa (japonica cultivar-group) Os03g0110300 (Os03g0110300) mRNA, complete cds Length = 1041 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 57 cgtcgccatggccgccgccgccgcc 81
>dbj|AB267407.1| Triticum aestivum mRNA for triticain alpha, complete cds Length = 1644 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 catgtccgccgccgccgccag 77 ||||||||||||||||||||| Sbjct: 72 catgtccgccgccgccgccag 52
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cttcgatggccgtatccaccc 202 ||||||||||||||||||||| Sbjct: 1707233 cttcgatggccgtatccaccc 1707213
>ref|XM_639137.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0217572) mRNA, complete cds Length = 4203 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1048 ccaacttcaccaacttcacca 1068 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1057 ccaacttcaccaacttcacca 1077 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1066 ccaacttcaccaacttcacca 1086 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1075 ccaacttcaccaacttcacca 1095 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1084 ccaacttcaccaacttcacca 1104 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1093 ccaacttcaccaacttcacca 1113 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1102 ccaacttcaccaacttcacca 1122 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 1111 ccaacttcaccaacttcacca 1131
>ref|NM_001005933.1| Danio rerio zgc:92584 (zgc:92584), mRNA gb|BC083524.1| Danio rerio zgc:92584, mRNA (cDNA clone MGC:92584 IMAGE:5913089), complete cds Length = 2615 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 806 gtgatattgggcccaaatttg 826 ||||||||||||||||||||| Sbjct: 738 gtgatattgggcccaaatttg 758
>gb|AC110814.5| Homo sapiens BAC clone RP11-1338A7 from 4, complete sequence Length = 137723 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1143 ttaactcagagcctaaaaataaggt 1167 |||||||||||| |||||||||||| Sbjct: 116537 ttaactcagagcttaaaaataaggt 116561
>gb|AC007364.3| Homo sapiens BAC clone RP11-329H24 from 2, complete sequence Length = 200908 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 accacctccactgtcccctcc 123 ||||||||||||||||||||| Sbjct: 23564 accacctccactgtcccctcc 23584
>gb|BC097101.1| Danio rerio zgc:92584, mRNA (cDNA clone MGC:114033 IMAGE:7215242), complete cds Length = 2590 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 806 gtgatattgggcccaaatttg 826 ||||||||||||||||||||| Sbjct: 716 gtgatattgggcccaaatttg 736
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 5.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 904 gtttgggagcgcggtgctggagcaactcttgcttgtgggactggtgcttgtgc 956 ||||||||||| || || || ||||| || ||||||||||| ||||| ||||| Sbjct: 1441497 gtttgggagcggggagcaggggcaacgctggcttgtgggacgggtgcctgtgc 1441445
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 26255970 gccatgtccgccgccgccgcc 26255950
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 577321 cgtcgccatggccgccgccgccgcc 577345
>emb|CR936852.6| Mouse DNA sequence from clone RP23-84I16 on chromosome 4, complete sequence Length = 72334 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 cccttccccaaacccctcccc 39 ||||||||||||||||||||| Sbjct: 62988 cccttccccaaacccctcccc 63008
>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence Length = 266544 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 244992 ccaacttcaccaacttcacca 245012 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245001 ccaacttcaccaacttcacca 245021 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245010 ccaacttcaccaacttcacca 245030 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245019 ccaacttcaccaacttcacca 245039 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245028 ccaacttcaccaacttcacca 245048 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245037 ccaacttcaccaacttcacca 245057 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245046 ccaacttcaccaacttcacca 245066 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccaacttcaccaacttcacca 106 ||||||||||||||||||||| Sbjct: 245055 ccaacttcaccaacttcacca 245075
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 120510 gccatgtccgccgccgccgcc 120490
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 24469 cgtcgccatggccgccgccgccgcc 24445
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 131113 cgtcgccatggccgccgccgccgcc 131089
>emb|AL929393.8| Mouse DNA sequence from clone RP23-94P7 on chromosome 4, complete sequence Length = 202299 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 cccttccccaaacccctcccc 39 ||||||||||||||||||||| Sbjct: 155463 cccttccccaaacccctcccc 155483
>dbj|AK106206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G02, full insert sequence Length = 1044 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 60 cgtcgccatggccgccgccgccgcc 84
>dbj|AK099209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059K22, full insert sequence Length = 1633 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 101 gccatgtccgccgccgccgcc 121
>dbj|AK099071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164B03, full insert sequence Length = 1504 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 29 gccatgtccgccgccgccgcc 49
>dbj|AK071905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L22, full insert sequence Length = 1633 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gccatgtccgccgccgccgcc 75 ||||||||||||||||||||| Sbjct: 101 gccatgtccgccgccgccgcc 121
>dbj|AK066769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082M21, full insert sequence Length = 831 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 51 cgtcgccatggccgccgccgccgcc 75
>dbj|AK066190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G16, full insert sequence Length = 807 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 58 cgtcgccatggccgccgccgccgcc 82
>ref|XM_310958.2| Anopheles gambiae str. PEST ENSANGP00000019328 (ENSANGG00000016839), partial mRNA Length = 3933 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 ggcgtcatcttcgtcatgccg 408 ||||||||||||||||||||| Sbjct: 3050 ggcgtcatcttcgtcatgccg 3030
>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence Length = 230189 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 860 ctgagtttgtacaggtcttgt 880 ||||||||||||||||||||| Sbjct: 162838 ctgagtttgtacaggtcttgt 162858
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccgccgccgccgccagagtca 82 ||||||||||||||||||||| Sbjct: 53665 ccgccgccgccgccagagtca 53685
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ccgccgccgccgccagagtca 82 ||||||||||||||||||||| Sbjct: 25669 ccgccgccgccgccagagtca 25689
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgtcgccatgtccgccgccgccgcc 75 |||||||||| |||||||||||||| Sbjct: 38595 cgtcgccatggccgccgccgccgcc 38571 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 232,440,390 Number of extensions: 12419941 Number of successful extensions: 427116 Number of sequences better than 10.0: 69 Number of HSP's gapped: 427111 Number of HSP's successfully gapped: 136 Length of query: 1400 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1377 Effective length of database: 18,503,978,556 Effective search space: 25479978471612 Effective search space used: 25479978471612 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
