ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6l12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101119:Os05g0567400 | 52 | 3e-07 | 2 | Os01g0772100:Os01g0772100 | 29 | 2.2 | 3 | AK120500:Os12g0188700 | 27 | 6.3 | 4 | AK061678:Os12g0188700 | 27 | 6.3 | 5 | AJ005841:Os12g0188700 | 27 | 6.3 |
|---|
>AK101119:Os05g0567400 | Length = 819 Score = 51.6 bits (122), Expect = 3e-07 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = +2 Query: 8 QRPKKEYVVAKKGVQVRTGKGKVLVDPRM 94 ++P+KEYVVAKKGVQVR GKGK+LVD RM Sbjct: 752 KKPQKEYVVAKKGVQVRAGKGKILVDKRM 780
>Os01g0772100:Os01g0772100 | Length = 526 Score = 28.9 bits (63), Expect = 2.2 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +1 Query: 10 AAQEGVCGGQEGCPGQDRQGQGAG 81 A +G CGG GCP D + + G Sbjct: 122 ACAQGACGGARGCPCADPEAEAVG 145
>AK120500:Os12g0188700 | Length = 99 Score = 27.3 bits (59), Expect = 6.3 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%) Frame = +3 Query: 30 WWPRRVSRSGPA-----RARCWWTRG*R 98 WW R R+G A R RCWW+ G R Sbjct: 68 WW--RTRRTGTAWCWGARRRCWWSSGHR 93
>AK061678:Os12g0188700 | Length = 99 Score = 27.3 bits (59), Expect = 6.3 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%) Frame = +3 Query: 30 WWPRRVSRSGPA-----RARCWWTRG*R 98 WW R R+G A R RCWW+ G R Sbjct: 68 WW--RTRRTGTAWCWGARRRCWWSSGHR 93
>AJ005841:Os12g0188700 | Length = 99 Score = 27.3 bits (59), Expect = 6.3 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%) Frame = +3 Query: 30 WWPRRVSRSGPA-----RARCWWTRG*R 98 WW R R+G A R RCWW+ G R Sbjct: 68 WW--RTRRTGTAWCWGARRRCWWSSGHR 93 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,166,298 Number of extensions: 195041 Number of successful extensions: 577 Number of sequences better than 10.0: 5 Number of HSP's gapped: 577 Number of HSP's successfully gapped: 5 Length of query: 177 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 83 Effective length of database: 11,636,001 Effective search space: 965788083 Effective search space used: 965788083 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
