ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6l09 |
|---|---|
| Clone Library Name | barley_pub |
>Q8BL97:SFRS7_MOUSE Splicing factor, arginine/serine-rich 7 - Mus musculus (Mouse)| Length = 267 Score = 95.9 bits (237), Expect = 2e-19 Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK- 342 ++YVGNL GELE F +G LR+VW+AR PPGFAF++F+D RDAEDA+R LDGK Sbjct: 41 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 100 Query: 343 ---NGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + RVELS + +CYECGE GH+A +C Sbjct: 101 ICGSRVRVELSTG------MPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 148
>Q16629:SFRS7_HUMAN Splicing factor, arginine/serine-rich 7 - Homo sapiens (Human)| Length = 238 Score = 95.9 bits (237), Expect = 2e-19 Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK- 342 ++YVGNL GELE F +G LR+VW+AR PPGFAF++F+D RDAEDA+R LDGK Sbjct: 12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 71 Query: 343 ---NGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + RVELS + +CYECGE GH+A +C Sbjct: 72 ICGSRVRVELSTG------MPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>Q3T106:SFRS7_BOVIN Splicing factor, arginine/serine-rich 7 - Bos taurus (Bovine)| Length = 235 Score = 95.9 bits (237), Expect = 2e-19 Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK- 342 ++YVGNL GELE F +G LR+VW+AR PPGFAF++F+D RDAEDA+R LDGK Sbjct: 12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 71 Query: 343 ---NGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + RVELS + +CYECGE GH+A +C Sbjct: 72 ICGSRVRVELSTG------MPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
>Q18409:RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6 - Caenorhabditis| elegans Length = 179 Score = 80.1 bits (196), Expect = 1e-14 Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 A++YVG L + T+ ELE+ F FG +R VWVAR+PPGFAF+++DD RDAEDA+R LDG Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62 Query: 343 N----GWRVELS 366 RVELS Sbjct: 63 RICGVRARVELS 74
>Q02427:RBP1_DROME RNA-binding protein 1 - Drosophila melanogaster (Fruit fly)| Length = 144 Score = 79.0 bits (193), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAED 318 R R+ ++YVGNL + + E+E F +G LR+VWVAR PPGFAF++F+D+RDAED Sbjct: 3 RYREWDLACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAED 62 Query: 319 ALRDLDG 339 A R LDG Sbjct: 63 ATRALDG 69
>P84104:SFRS3_MOUSE Splicing factor, arginine/serine-rich 3 - Mus musculus (Mouse)| Length = 164 Score = 77.4 bits (189), Expect = 8e-14 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGKN 345 ++YVGNL ELE F +G LRSVWVAR PPGFAF++F+D RDA DA+R+LDG+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70 Query: 346 ----GWRVELS 366 RVELS Sbjct: 71 LCGCRVRVELS 81
>P84103:SFRS3_HUMAN Splicing factor, arginine/serine-rich 3 - Homo sapiens (Human)| Length = 164 Score = 77.4 bits (189), Expect = 8e-14 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGKN 345 ++YVGNL ELE F +G LRSVWVAR PPGFAF++F+D RDA DA+R+LDG+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70 Query: 346 ----GWRVELS 366 RVELS Sbjct: 71 LCGCRVRVELS 81
>Q3SZR8:SFRS3_BOVIN Splicing factor, arginine/serine-rich 3 - Bos taurus (Bovine)| Length = 164 Score = 77.4 bits (189), Expect = 8e-14 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGKN 345 ++YVGNL ELE F +G LRSVWVAR PPGFAF++F+D RDA DA+R+LDG+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70 Query: 346 ----GWRVELS 366 RVELS Sbjct: 71 LCGCRVRVELS 81
>Q24491:RX21_DROME RNA-binding protein Rsf1 - Drosophila melanogaster (Fruit fly)| Length = 197 Score = 66.2 bits (160), Expect = 2e-10 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 4/72 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK- 342 R+YVGNL +V +LE EF +G L SVW+A PPGFAF++F+ + DAE A L+G Sbjct: 8 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSE 67 Query: 343 ---NGWRVELSR 369 + RVE+S+ Sbjct: 68 LLGSQLRVEISK 79
>Q23121:RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 - Caenorhabditis| elegans Length = 312 Score = 63.2 bits (152), Expect = 1e-09 Identities = 30/60 (50%), Positives = 43/60 (71%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 AR+Y+G L +RV+ ++E FR +G +R V + GF F++FDDKRDAEDA+ DL+GK Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
>O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 303 Score = 55.8 bits (133), Expect = 2e-07 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFG--VLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 +YVGNL + E+ED F +G V + V +PPG+AF++FDD RDAEDA+ DG Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDG 67
>Q23120:RSP2_CAEEL Probable splicing factor, arginine/serine-rich 2 - Caenorhabditis| elegans Length = 281 Score = 54.3 bits (129), Expect = 7e-07 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M R+Y+G L R + ++E FR +G L V + GF F+DF D+RDA+DA+ DL+G Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKN---GFGFVDFQDQRDADDAVHDLNG 57 Query: 340 K 342 K Sbjct: 58 K 58
>Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 - Caenorhabditis| elegans Length = 258 Score = 53.9 bits (128), Expect = 9e-07 Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV-ARKPPGFAFIDFDDKRDAEDALRDLDG 339 ++YVGNL V E+ED F +G ++ V + + + P FAF++F+D RDAEDA+R DG Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>Q6DII2:SFRS1_XENTR Splicing factor, arginine/serine-rich 1 - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 267 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q5R7H2:SFRS1_PONPY Splicing factor, arginine/serine-rich 1 - Pongo pygmaeus| (Orangutan) Length = 248 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q3YLA6:SFRS1_PIG Splicing factor, arginine/serine-rich 1 - Sus scrofa (Pig)| Length = 248 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q6PDM2:SFRS1_MOUSE Splicing factor, arginine/serine-rich 1 - Mus musculus (Mouse)| Length = 248 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q07955:SFRS1_HUMAN Splicing factor, arginine/serine-rich 1 - Homo sapiens (Human)| Length = 248 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q5ZML3:SFRS1_CHICK Splicing factor, arginine/serine-rich 1 - Gallus gallus (Chicken)| Length = 257 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q0VCY7:SFRS1_BOVIN Splicing factor, arginine/serine-rich 1 - Bos taurus (Bovine)| Length = 248 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 77 YDYDGYRLRV 86
>Q6NYA0:SFRS1_DANRE Splicing factor, arginine/serine-rich 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 245 Score = 52.8 bits (125), Expect = 2e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 75 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 76 YDYDGYRLRV 85
>Q7SXP4:SF1L1_DANRE Splicing factor, arginine/serine-rich 1-like protein 1 - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 245 Score = 52.4 bits (124), Expect = 3e-06 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA--RKPPGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + ++ED F +G +R + + R P FAF++F+D RDAEDA+ DG Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDG 75 Query: 340 --KNGWRVEL 363 +G+R+ + Sbjct: 76 YDYDGYRLRV 85
>Q10021:RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5 - Caenorhabditis| elegans Length = 208 Score = 50.4 bits (119), Expect = 1e-05 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M RLY+G + ++E + +G + ++ + GFAF+DF+D RDAEDA DLDG Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDG 57 Query: 340 K 342 K Sbjct: 58 K 58
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 48.9 bits (115), Expect = 3e-05 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%) Frame = +1 Query: 130 APRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRD 309 A RR +++VGNL + A E+ + F+ +G + + R + F+ D D Sbjct: 75 AKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN---YGFVHLDCVGD 131 Query: 310 AEDALRDLDGK----NGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESG 477 +DA+++L+G+ +V++S + +CY CG SG Sbjct: 132 VQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPE--------------QCYRCGRSG 177 Query: 478 HFAREC-RLRIGAGG 519 H+++EC RL AGG Sbjct: 178 HWSKECPRLYGSAGG 192 Score = 34.3 bits (77), Expect = 0.74 Identities = 16/58 (27%), Positives = 32/58 (55%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 +L++GNLD + A EL F +G + V + + F+ + ++ DA+++L+G Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVK---NYGFVHMETEQQGRDAIQNLNG 62
>Q09167:SFRS5_RAT Splicing factor, arginine/serine-rich 5 - Rattus norvegicus (Rat)| Length = 269 Score = 48.1 bits (113), Expect = 5e-05 Identities = 22/59 (37%), Positives = 39/59 (66%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 R+++G L+ ++E F+ +G +R + + R GF F++F+D RDA+DA+ +LDGK Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGK 60
>O35326:SFRS5_MOUSE Splicing factor, arginine/serine-rich 5 - Mus musculus (Mouse)| Length = 270 Score = 48.1 bits (113), Expect = 5e-05 Identities = 22/59 (37%), Positives = 39/59 (66%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 R+++G L+ ++E F+ +G +R + + R GF F++F+D RDA+DA+ +LDGK Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGK 60
>Q13243:SFRS5_HUMAN Splicing factor, arginine/serine-rich 5 - Homo sapiens (Human)| Length = 272 Score = 48.1 bits (113), Expect = 5e-05 Identities = 22/59 (37%), Positives = 39/59 (66%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 R+++G L+ ++E F+ +G +R + + R GF F++F+D RDA+DA+ +LDGK Sbjct: 5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGK 60
>Q9D0B0:SFRS9_MOUSE Splicing factor, arginine/serine-rich 9 - Mus musculus (Mouse)| Length = 222 Score = 47.8 bits (112), Expect = 7e-05 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKP--PGFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL + V +LED F +G +R + + + FAF+ F+D RDAEDA+ G Sbjct: 16 RIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 72 Query: 340 KNGW 351 +NG+ Sbjct: 73 RNGY 76
>Q9R0U0:FUSIP_MOUSE FUS-interacting serine-arginine-rich protein 1 - Mus musculus| (Mouse) Length = 262 Score = 47.8 bits (112), Expect = 7e-05 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 L+V N+ + +L EF +G + V+V R+P GFA++ F+D RDAEDAL +L Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 71 Query: 334 DGK 342 D K Sbjct: 72 DRK 74
>O75494:FUSIP_HUMAN FUS-interacting serine-arginine-rich protein 1 - Homo sapiens| (Human) Length = 262 Score = 47.8 bits (112), Expect = 7e-05 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 L+V N+ + +L EF +G + V+V R+P GFA++ F+D RDAEDAL +L Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 71 Query: 334 DGK 342 D K Sbjct: 72 DRK 74
>Q5PPI1:SFRS9_RAT Splicing factor, arginine/serine-rich 9 - Rattus norvegicus (Rat)| Length = 221 Score = 47.4 bits (111), Expect = 8e-05 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP--GFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL V +LED F +G +R + + + FAF+ F+D RDAEDA+ G Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71 Query: 340 KNGW 351 +NG+ Sbjct: 72 RNGY 75
>Q13242:SFRS9_HUMAN Splicing factor, arginine/serine-rich 9 - Homo sapiens (Human)| Length = 221 Score = 47.4 bits (111), Expect = 8e-05 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP--GFAFIDFDDKRDAEDALRDLDG 339 R+YVGNL V +LED F +G +R + + + FAF+ F+D RDAEDA+ G Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71 Query: 340 KNGW 351 +NG+ Sbjct: 72 RNGY 75
>P26686:SRR55_DROME Serine-arginine protein 55 - Drosophila melanogaster (Fruit fly)| Length = 376 Score = 46.6 bits (109), Expect = 1e-04 Identities = 23/60 (38%), Positives = 38/60 (63%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 +R+YVG L V +LE F+ +G R + + G+ F++F+D RDA+DA+ +L+GK Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 46.6 bits (109), Expect = 1e-04 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G P P D+ M L V NL R + L F +G + V++ R + GFAF Sbjct: 4 GRPPP----DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAF 59 Query: 286 IDFDDKRDAEDALRDLDG 339 + F DKRDAEDA+ +DG Sbjct: 60 VRFHDKRDAEDAMDAMDG 77
>Q8VE97:SFRS4_MOUSE Splicing factor, arginine/serine-rich 4 - Mus musculus (Mouse)| Length = 489 Score = 45.8 bits (107), Expect = 2e-04 Identities = 22/62 (35%), Positives = 39/62 (62%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M R+Y+G L + ++E F+ +G + V + G+ F++FDD RDA+DA+ +L+G Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57 Query: 340 KN 345 K+ Sbjct: 58 KD 59
>Q08170:SFRS4_HUMAN Splicing factor, arginine/serine-rich 4 - Homo sapiens (Human)| Length = 494 Score = 45.8 bits (107), Expect = 2e-04 Identities = 22/62 (35%), Positives = 39/62 (62%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M R+Y+G L + ++E F+ +G + V + G+ F++FDD RDA+DA+ +L+G Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57 Query: 340 KN 345 K+ Sbjct: 58 KD 59
>P92965:RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 - Arabidopsis thaliana| (Mouse-ear cress) Length = 350 Score = 45.1 bits (105), Expect = 4e-04 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD- 336 M ++ GN + G+LE FR +G + V + GFAF+ +D+RDAEDA+R LD Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA---GFAFVYMEDERDAEDAIRALDR 57 Query: 337 ---GKNGWRVEL 363 G+ G R+ + Sbjct: 58 FEFGRKGRRLRV 69
>Q9U1N0:HRP65_CHITE Hrp65 protein - Chironomus tentans (Midge)| Length = 535 Score = 45.1 bits (105), Expect = 4e-04 Identities = 23/59 (38%), Positives = 36/59 (61%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 RLY+GNL + VT EL++ F +G + ++ FAF+ D + +AE A +DLDG+ Sbjct: 114 RLYIGNLTSDVTEEELKELFSPYGEISEAFI-NAEKNFAFLKIDYRANAERAKKDLDGR 171
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 44.7 bits (104), Expect = 6e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFA 282 +G P P ++ + A LYVG+LD VT L +FR G LR V R P G+ Sbjct: 3 SGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYG 62 Query: 283 FIDFDDKRDAEDALRDLD 336 +++F DAE AL ++ Sbjct: 63 YVNFRFPADAEWALNTMN 80 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKR 306 R RD T ++V N+ + +L++ F +G SV V R K GF F+ ++ Sbjct: 191 RTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHE 250 Query: 307 DAEDALRDLDGKN 345 A+ A+ DL GK+ Sbjct: 251 AAQKAVLDLHGKS 263
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 44.7 bits (104), Expect = 6e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFA 282 +G P P ++ + A LYVG+LD VT L +FR G LR V R P G+ Sbjct: 3 SGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYG 62 Query: 283 FIDFDDKRDAEDALRDLD 336 +++F DAE AL ++ Sbjct: 63 YVNFRFPADAEWALNTMN 80 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKR 306 R RD T ++V N+ + +L++ F +G SV V R K GF F+ ++ Sbjct: 191 RTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHE 250 Query: 307 DAEDALRDLDGKN 345 A+ A+ DL GK+ Sbjct: 251 AAQKAVLDLHGKS 263
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 44.7 bits (104), Expect = 6e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFA 282 +G P P ++ + A LYVG+LD VT L +FR G LR V R P G+ Sbjct: 3 SGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYG 62 Query: 283 FIDFDDKRDAEDALRDLD 336 +++F DAE AL ++ Sbjct: 63 YVNFRFPADAEWALNTMN 80 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKR 306 R RD T ++V N+ + +L++ F +G SV V R K GF F+ ++ Sbjct: 191 RTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHE 250 Query: 307 DAEDALRDLDGKN 345 A+ A+ DL GK+ Sbjct: 251 AAQKAVLDLHGKS 263
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 44.7 bits (104), Expect = 6e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFA 282 +G P P ++ + A LYVG+LD VT L +FR G LR V R P G+ Sbjct: 3 SGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYG 62 Query: 283 FIDFDDKRDAEDALRDLD 336 +++F DAE AL ++ Sbjct: 63 YVNFRFPADAEWALNTMN 80 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKR 306 R RD T ++V N+ + +L++ F +G SV V R K GF F+ ++ Sbjct: 191 RTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHE 250 Query: 307 DAEDALRDLDGKN 345 A+ A+ DL GK+ Sbjct: 251 AAQKAVLDLHGKS 263
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 44.7 bits (104), Expect = 6e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFA 282 +G P P ++ + A LYVG+LD VT L +FR G LR V R P G+ Sbjct: 3 SGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYG 62 Query: 283 FIDFDDKRDAEDALRDLD 336 +++F DAE AL ++ Sbjct: 63 YVNFRFPADAEWALNTMN 80 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKR 306 R RD T ++V N+ + +L++ F +G SV V R K GF F+ ++ Sbjct: 191 RTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHE 250 Query: 307 DAEDALRDLDGKN 345 A+ A+ DL GK+ Sbjct: 251 AAQKAVLDLHGKS 263
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 44.7 bits (104), Expect = 6e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFA 282 +G P P ++ + A LYVG+LD VT L +FR G LR V R P G+ Sbjct: 3 SGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYG 62 Query: 283 FIDFDDKRDAEDALRDLD 336 +++F DAE AL ++ Sbjct: 63 YVNFRFPADAEWALNTMN 80 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 139 RRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKR 306 R RD T ++V N+ + +L++ F +G SV V R K GF F+ ++ Sbjct: 191 RTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHE 250 Query: 307 DAEDALRDLDGKN 345 A+ A+ DL GK+ Sbjct: 251 AAQKAVLDLHGKS 263
>Q13247:SFRS6_HUMAN Splicing factor, arginine/serine-rich 6 - Homo sapiens (Human)| Length = 344 Score = 44.3 bits (103), Expect = 7e-04 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M R+Y+G L V +++ F +G L V + G+ F++F+D RDA+DA+ +L+G Sbjct: 1 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSRDADDAVYELNG 57 Query: 340 K 342 K Sbjct: 58 K 58
>Q8WXF0:SRR35_HUMAN 35 kDa SR repressor protein - Homo sapiens (Human)| Length = 261 Score = 43.9 bits (102), Expect = 0.001 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 L++ N+ +L EF +G + V++ R+P GFA++ F+D RDAEDAL +L Sbjct: 12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNL 71 Query: 334 DGK 342 + K Sbjct: 72 NRK 74
>Q3B7L6:SFRS6_BOVIN Splicing factor, arginine/serine-rich 6 - Bos taurus (Bovine)| Length = 345 Score = 43.9 bits (102), Expect = 0.001 Identities = 21/61 (34%), Positives = 37/61 (60%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M R+Y+G L V +++ F +G L + + G+ F++F+D RDA+DA+ +L+G Sbjct: 1 MPRVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKN---GYGFVEFEDSRDADDAVYELNG 57 Query: 340 K 342 K Sbjct: 58 K 58
>Q8TBF4:ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Homo sapiens (Human) Length = 217 Score = 43.5 bits (101), Expect = 0.001 Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 5/114 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YV NL +T +L F +G + V + RK G AFI F DK A++ R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAI 71 Query: 334 DGKNGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + K +L KCYECGESGH + C Sbjct: 72 NNK-----QLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>P92966:RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 - Arabidopsis thaliana| (Mouse-ear cress) Length = 356 Score = 43.5 bits (101), Expect = 0.001 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD- 336 M ++ GN + +LE FR +G + V + GFAF+ +D+RDAEDA+R LD Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKA---GFAFVYMEDERDAEDAIRALDR 57 Query: 337 ---GKNG--WRVELSRN 372 G+ G RVE ++N Sbjct: 58 FEYGRTGRRLRVEWTKN 74
>Q9VRV7:PM14_DROME Pre-mRNA branch site p14-like protein - Drosophila melanogaster| (Fruit fly) Length = 121 Score = 42.7 bits (99), Expect = 0.002 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP--GFAFIDFDDKRDAEDALRDLDGK 342 LYV NL ++T+ E+ D F FG +R + V P G AF+ ++D DA++A L G Sbjct: 17 LYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGF 76 Query: 343 N 345 N Sbjct: 77 N 77
>Q6DJI9:ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Xenopus laevis (African clawed frog) Length = 218 Score = 42.4 bits (98), Expect = 0.003 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 5/114 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YV NL +T +L F +G + V + +RK G +F+ F DK A++ +R L Sbjct: 12 VYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNCVRGL 71 Query: 334 DGKNGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + K +L +CYECG++GH + C Sbjct: 72 NNK-----QLFGRAIKASIAKDNGRATEFIRRRNYTDKSRCYECGDTGHLSYAC 120
>Q56JZ7:ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Bos taurus (Bovine) Length = 217 Score = 42.4 bits (98), Expect = 0.003 Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 5/114 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YV NL +T +L F +G + V + R+ G AFI F DK A++ R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71 Query: 334 DGKNGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + K +L KCYECGESGH + C Sbjct: 72 NNK-----QLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 42.4 bits (98), Expect = 0.003 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = +1 Query: 112 PTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPG 276 PTN + T A LYVG LD VT L + F G + S+ V R+ G Sbjct: 63 PTNASSVATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLG 122 Query: 277 FAFIDFDDKRDAEDALRDLD 336 +A+++F + D E AL +L+ Sbjct: 123 YAYVNFHNMEDGEKALDELN 142 Score = 32.0 bits (71), Expect = 3.7 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA----RKPPGFAFIDFDDKRDAEDALRDLD 336 +++ NLD + L D F FG + S VA G+ F+ FD A A+ ++ Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVN 229 Query: 337 G 339 G Sbjct: 230 G 230
>Q62376:RU17_MOUSE U1 small nuclear ribonucleoprotein 70 kDa - Mus musculus (Mouse)| Length = 448 Score = 42.0 bits (97), Expect = 0.004 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%) Frame = +1 Query: 133 PRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFD 297 P + D F L+V ++ T +L EF V+G ++ + + + KP G+AFI+++ Sbjct: 95 PNAQGDAFKT--LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYE 152 Query: 298 DKRDAEDALRDLDGK 342 +RD A + DGK Sbjct: 153 HERDMHSAYKHADGK 167
>P08621:RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa - Homo sapiens (Human)| Length = 437 Score = 42.0 bits (97), Expect = 0.004 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%) Frame = +1 Query: 133 PRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFD 297 P + D F L+V ++ T +L EF V+G ++ + + + KP G+AFI+++ Sbjct: 95 PNAQGDAFKT--LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYE 152 Query: 298 DKRDAEDALRDLDGK 342 +RD A + DGK Sbjct: 153 HERDMHSAYKHADGK 167
>Q1RMR2:RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa - Bos taurus (Bovine)| Length = 439 Score = 42.0 bits (97), Expect = 0.004 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%) Frame = +1 Query: 133 PRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFD 297 P + D F L+V ++ T +L EF V+G ++ + + + KP G+AFI+++ Sbjct: 95 PNAQGDAFKT--LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYE 152 Query: 298 DKRDAEDALRDLDGK 342 +RD A + DGK Sbjct: 153 HERDMHSAYKHADGK 167
>P92964:RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 - Arabidopsis thaliana| (Mouse-ear cress) Length = 264 Score = 42.0 bits (97), Expect = 0.004 Identities = 23/59 (38%), Positives = 35/59 (59%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 M ++VGN + +LE F +G + V + G+AF+ F+D+RDAEDA+R LD Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS---GYAFVYFEDERDAEDAIRKLD 56
>Q3ZCC5:RBM18_BOVIN Probable RNA-binding protein 18 - Bos taurus (Bovine)| Length = 190 Score = 42.0 bits (97), Expect = 0.004 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 8/67 (11%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVL--------RSVWVARKPPGFAFIDFDDKRDAEDA 321 RL++GNLD ++T L + FG + +S + +P G+ F++F+ K++AE A Sbjct: 26 RLWIGNLDPKITEYHLLRLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85 Query: 322 LRDLDGK 342 ++ L+GK Sbjct: 86 IQCLNGK 92
>Q5BGA9:MRD1_EMENI Multiple RNA-binding domain-containing protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 819 Score = 42.0 bits (97), Expect = 0.004 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDALR 327 ARL+V NL ELE F FG + + VA GFA++ + D A +A R Sbjct: 295 ARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYR 354 Query: 328 DLDGK 342 +LDGK Sbjct: 355 NLDGK 359
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 42.0 bits (97), Expect = 0.004 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE F +G + V + + K GFAF+ F+ DA+DA RD Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 331 LDGKN 345 ++GK+ Sbjct: 69 MNGKS 73
>Q499V6:ZCRB1_RAT Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Rattus norvegicus (Rat) Length = 217 Score = 41.6 bits (96), Expect = 0.005 Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 5/114 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YV NL +T +L F +G + V + RK G AFI F DK A + R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71 Query: 334 DGKNGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + K +L KCYECGESGH + C Sbjct: 72 NNK-----QLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>Q9CZ96:ZCRB1_MOUSE Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Mus musculus (Mouse) Length = 217 Score = 41.6 bits (96), Expect = 0.005 Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 5/114 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YV NL +T +L F +G + V + RK G AFI F DK A + R + Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71 Query: 334 DGKNGWRVELSRNXXXXXXXXXXXXXXXXXXXXXXXSDMKCYECGESGHFAREC 495 + K +L KCYECGESGH + C Sbjct: 72 NNK-----QLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYAC 120
>Q66II8:RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 471 Score = 41.6 bits (96), Expect = 0.005 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 L+V ++ T +L EF V+G ++ + + + KP G+AFI+++ +RD A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 334 DGK 342 DGK Sbjct: 165 DGK 167
>P09406:RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa - Xenopus laevis (African| clawed frog) Length = 471 Score = 41.2 bits (95), Expect = 0.006 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 8/66 (12%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV--------ARKPPGFAFIDFDDKRDAEDAL 324 L+V ++ T +L EF V+G ++ + + + KP G+AFI+++ +RD A Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAY 164 Query: 325 RDLDGK 342 + DGK Sbjct: 165 KHADGK 170
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 40.8 bits (94), Expect = 0.008 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA----RKPPGFAFIDFDDKRDAEDALRDLD 336 LYVGNLD +T L+ F+V G + ++ + K +AF+++ DA AL+ L+ Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLN 136 Query: 337 GK 342 GK Sbjct: 137 GK 138
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 40.8 bits (94), Expect = 0.008 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE F +G + V + + K GFAFI F+ DA+ A+RD Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68 Query: 331 LDGKN 345 ++GK+ Sbjct: 69 MNGKS 73
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 40.8 bits (94), Expect = 0.008 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE EF +G + V + + K GFAF+ F+ DA+ A RD Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68 Query: 331 LDGKN 345 ++GK+ Sbjct: 69 MNGKS 73
>Q8SX83:SPEN_DROME Protein split ends - Drosophila melanogaster (Fruit fly)| Length = 5560 Score = 40.4 bits (93), Expect = 0.010 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKP-PGFAFIDFDDKRDAEDALRDLDGKN 345 L++GNL+ +TAGEL F FG + + + ++ +AF + D A+R +DG++ Sbjct: 658 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 717
>Q09511:RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4 - Caenorhabditis| elegans Length = 196 Score = 40.4 bits (93), Expect = 0.010 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDD 300 R D+ + L + NL + T +L F +G + V + +R+ GF F+ F + Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69 Query: 301 KRDAEDALRDLDGK 342 +RDAE AL DGK Sbjct: 70 RRDAEHALDRTDGK 83
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 40.4 bits (93), Expect = 0.010 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +1 Query: 148 DLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKP----PGFAFIDFDDKRDAE 315 D F + LYV NLD ++ +L++ F FG + S V R P G F+ F +A Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEAT 372 Query: 316 DALRDLDGK 342 +A+ L GK Sbjct: 373 EAMSQLSGK 381
>P59708:PM14_MOUSE Pre-mRNA branch site protein p14 - Mus musculus (Mouse)| Length = 125 Score = 40.0 bits (92), Expect = 0.014 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP--GFAFIDFDDKRDAEDALRDLDGK 342 LY+ NL ++TA E+ D F +G +R + V P G A++ ++D DA++A L G Sbjct: 21 LYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGF 80 Query: 343 N 345 N Sbjct: 81 N 81
>Q9Y3B4:PM14_HUMAN Pre-mRNA branch site protein p14 - Homo sapiens (Human)| Length = 125 Score = 40.0 bits (92), Expect = 0.014 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP--GFAFIDFDDKRDAEDALRDLDGK 342 LY+ NL ++TA E+ D F +G +R + V P G A++ ++D DA++A L G Sbjct: 21 LYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGF 80 Query: 343 N 345 N Sbjct: 81 N 81
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 40.0 bits (92), Expect = 0.014 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA----RKPPGFAFIDFDDKRDAEDALRDLD 336 LY+ NLDA V+ L ++F FG + S+ +A R G+AF++FD+ DA A ++ Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVN 262 Query: 337 G 339 G Sbjct: 263 G 263
>Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 302 Score = 40.0 bits (92), Expect = 0.014 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 7/79 (8%) Frame = +1 Query: 109 PPTNGAPAPRRRRDLFTM--ARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARK 267 PP N P + +YVGN+D TA ELE F G + V + + Sbjct: 148 PPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGH 207 Query: 268 PPGFAFIDFDDKRDAEDAL 324 P GFA+I+F DK +L Sbjct: 208 PKGFAYIEFSDKESVRTSL 226
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 40.0 bits (92), Expect = 0.014 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE F +G + + + + K GFAF+ F+ DA+D RD Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 331 LDGKN 345 ++GK+ Sbjct: 69 MNGKS 73
>P78814:SRP2_SCHPO Pre-mRNA-splicing factor srp2 - Schizosaccharomyces pombe (Fission| yeast) Length = 365 Score = 39.7 bits (91), Expect = 0.018 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 RL+VG + + T ++ D F+ +G + + GF F++ +D RDA D + D GK Sbjct: 5 RLFVGRIPPQATREDMMDFFKGYGQILDCKLMN---GFGFVEVEDARDARDIVNDFQGK 60
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 39.7 bits (91), Expect = 0.018 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L+ LED F FG + V V + + GF FI F + A DA+R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 331 LDGKN 345 ++G++ Sbjct: 67 MNGES 71
>Q86U42:PABP2_HUMAN Polyadenylate-binding protein 2 - Homo sapiens (Human)| Length = 306 Score = 39.7 bits (91), Expect = 0.018 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D TA ELE F G + V + + P GFA+I+F DK +L Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 230
>Q28165:PABP2_BOVIN Polyadenylate-binding protein 2 - Bos taurus (Bovine)| Length = 306 Score = 39.7 bits (91), Expect = 0.018 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D TA ELE F G + V + + P GFA+I+F DK +L Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 230
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 39.7 bits (91), Expect = 0.018 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK----PPGFAFIDFDDKRDAEDALRD 330 +++ + NL T +L + F FG L+SV V +K GFAF++F+ ++AE A+ Sbjct: 717 SKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQ 776 Query: 331 LDG 339 L+G Sbjct: 777 LEG 779
>O65001:TE1_MAIZE Protein terminal ear1 - Zea mays (Maize)| Length = 656 Score = 39.3 bits (90), Expect = 0.023 Identities = 19/49 (38%), Positives = 29/49 (59%) Frame = +1 Query: 196 VTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 V+ +L F+ FG L+ V + + P F+DF D RDA AL +L+G+ Sbjct: 221 VSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAELNGQ 269
>Q09100:RNP24_SCHPO RNA-binding protein rnp24 - Schizosaccharomyces pombe (Fission| yeast) Length = 369 Score = 39.3 bits (90), Expect = 0.023 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 L+VGNLD T +L++ F G +R V + K GF F+DF D A+ Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME-- 287 Query: 334 DGKNGWRVE 360 G N WR+E Sbjct: 288 LGHNSWRLE 296
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 39.3 bits (90), Expect = 0.023 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L + VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 36.6 bits (83), Expect = 0.15 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKP----PGFAFIDFDDKRDAEDALRDLD 336 +Y+ N V L++ F FG SV V R P GF F+ ++ DA A+ +++ Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252 Query: 337 GK 342 GK Sbjct: 253 GK 254 Score = 34.7 bits (78), Expect = 0.57 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRDLDG 339 LY+ NLD + +L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 31.6 bits (70), Expect = 4.8 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRD 330 + +++ NLD + L D F FG + S V G+AF+ F+ + A+ A+ Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEK 157 Query: 331 LDG 339 ++G Sbjct: 158 MNG 160
>Q6NVP7:PABP2_XENTR Polyadenylate-binding protein 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 296 Score = 39.3 bits (90), Expect = 0.023 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D TA ELE F G + V + P GFA+I+F DK +L Sbjct: 165 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSL 221
>Q7ZXB8:PAB2B_XENLA Polyadenylate-binding protein 2-B - Xenopus laevis (African clawed| frog) Length = 295 Score = 39.3 bits (90), Expect = 0.023 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D TA ELE F G + V + P GFA+I+F DK +L Sbjct: 164 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSL 220
>Q04047:NONA_DROME Protein no-on-transient A - Drosophila melanogaster (Fruit fly)| Length = 700 Score = 39.3 bits (90), Expect = 0.023 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 RLYVGNL +T EL + F+ +G + ++ + F F+ D +AE A R LDG Sbjct: 303 RLYVGNLTNDITDDELREMFKPYGEISEIF-SNLDKNFTFLKVDYHPNAEKAKRALDG 359
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 38.9 bits (89), Expect = 0.030 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 34.7 bits (78), Expect = 0.57 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 33.1 bits (74), Expect = 1.7 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L++ F +G SV V K GF F+ F+ DA+ A+ D++ Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMN 252 Query: 337 GKN 345 GK+ Sbjct: 253 GKD 255
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 38.9 bits (89), Expect = 0.030 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 35.0 bits (79), Expect = 0.44 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 31.6 bits (70), Expect = 4.8 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L++ F +G SV V K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GKN 345 GK+ Sbjct: 253 GKD 255
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 38.9 bits (89), Expect = 0.030 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 33.9 bits (76), Expect = 0.97 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L++ F FG SV V + K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GK--NGWRVELSR 369 GK NG ++ + R Sbjct: 253 GKELNGKQIYVGR 265 Score = 31.2 bits (69), Expect = 6.3 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRD 330 + +++ NLD + L D F FG + S V G+ F+ F+ + AE A+ Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 157 Query: 331 LDG 339 ++G Sbjct: 158 MNG 160
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 38.9 bits (89), Expect = 0.030 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 33.9 bits (76), Expect = 0.97 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L++ F FG SV V + K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GK--NGWRVELSR 369 GK NG ++ + R Sbjct: 253 GKELNGKQIYVGR 265 Score = 31.2 bits (69), Expect = 6.3 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRD 330 + +++ NLD + L D F FG + S V G+ F+ F+ + AE A+ Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 157 Query: 331 LDG 339 ++G Sbjct: 158 MNG 160
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 38.9 bits (89), Expect = 0.030 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 35.4 bits (80), Expect = 0.33 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L+D F FG SV V + K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GK--NGWRVELSR 369 GK NG ++ + R Sbjct: 253 GKELNGKQIYVGR 265 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 31.2 bits (69), Expect = 6.3 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRD 330 + +++ NLD + L D F FG + S V G+ F+ F+ + AE A+ Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 157 Query: 331 LDG 339 ++G Sbjct: 158 MNG 160
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 38.9 bits (89), Expect = 0.030 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L VT L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 35.4 bits (80), Expect = 0.33 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L+D F FG SV V + K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GK--NGWRVELSR 369 GK NG ++ + R Sbjct: 253 GKELNGKQIYVGR 265 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 31.2 bits (69), Expect = 6.3 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRD 330 + +++ NLD + L D F FG + S V G+ F+ F+ + AE A+ Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 157 Query: 331 LDG 339 ++G Sbjct: 158 MNG 160
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 38.9 bits (89), Expect = 0.030 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE F +G + + + + K GFAF+ + DA+DA RD Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 331 LDGKN 345 ++GK+ Sbjct: 69 MNGKS 73
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 38.9 bits (89), Expect = 0.030 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE EF +G + V + + K GFAF+ F+ +A+ A RD Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARD 68 Query: 331 LDGKN 345 ++GK+ Sbjct: 69 MNGKS 73
>Q6AYK1:RNPS1_RAT RNA-binding protein with serine-rich domain 1 - Rattus norvegicus| (Rat) Length = 305 Score = 38.5 bits (88), Expect = 0.039 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Frame = +1 Query: 109 PPTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW--VARKPP--- 273 PP +RR ++++G L VT + + F +G ++ + V R P Sbjct: 143 PPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS 202 Query: 274 -GFAFIDFDDKRDAEDALRDLDG 339 G+A+++F++ +AE AL+ +DG Sbjct: 203 KGYAYVEFENPDEAEKALKHMDG 225
>Q5NVM8:RNPS1_PONPY RNA-binding protein with serine-rich domain 1 - Pongo pygmaeus| (Orangutan) Length = 305 Score = 38.5 bits (88), Expect = 0.039 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Frame = +1 Query: 109 PPTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW--VARKPP--- 273 PP +RR ++++G L VT + + F +G ++ + V R P Sbjct: 143 PPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS 202 Query: 274 -GFAFIDFDDKRDAEDALRDLDG 339 G+A+++F++ +AE AL+ +DG Sbjct: 203 KGYAYVEFENPDEAEKALKHMDG 225
>Q99M28:RNPS1_MOUSE RNA-binding protein with serine-rich domain 1 - Mus musculus| (Mouse) Length = 305 Score = 38.5 bits (88), Expect = 0.039 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Frame = +1 Query: 109 PPTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW--VARKPP--- 273 PP +RR ++++G L VT + + F +G ++ + V R P Sbjct: 143 PPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS 202 Query: 274 -GFAFIDFDDKRDAEDALRDLDG 339 G+A+++F++ +AE AL+ +DG Sbjct: 203 KGYAYVEFENPDEAEKALKHMDG 225
>Q4R5N1:RNPS1_MACFA RNA-binding protein with serine-rich domain 1 - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 305 Score = 38.5 bits (88), Expect = 0.039 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Frame = +1 Query: 109 PPTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW--VARKPP--- 273 PP +RR ++++G L VT + + F +G ++ + V R P Sbjct: 143 PPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS 202 Query: 274 -GFAFIDFDDKRDAEDALRDLDG 339 G+A+++F++ +AE AL+ +DG Sbjct: 203 KGYAYVEFENPDEAEKALKHMDG 225
>Q15287:RNPS1_HUMAN RNA-binding protein with serine-rich domain 1 - Homo sapiens| (Human) Length = 305 Score = 38.5 bits (88), Expect = 0.039 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Frame = +1 Query: 109 PPTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW--VARKPP--- 273 PP +RR ++++G L VT + + F +G ++ + V R P Sbjct: 143 PPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS 202 Query: 274 -GFAFIDFDDKRDAEDALRDLDG 339 G+A+++F++ +AE AL+ +DG Sbjct: 203 KGYAYVEFENPDEAEKALKHMDG 225
>Q9GRW7:NONA_DROVI Protein no-on-transient A - Drosophila virilis (Fruit fly)| Length = 697 Score = 38.5 bits (88), Expect = 0.039 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 RLYVGNL +T EL + F+ +G + ++ + F F+ D +AE A R LDG Sbjct: 286 RLYVGNLTNDITDEELREMFKPYGEIGEIF-SNLEKNFTFLKVDYHINAEKAKRPLDG 342
>O13620:MRD1_SCHPO Multiple RNA-binding domain-containing protein 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 833 Score = 38.5 bits (88), Expect = 0.039 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRD 330 RL++ NL +L+ F FG L V + P GFA+IDF D DA A + Sbjct: 324 RLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLE 383 Query: 331 LDGK 342 LD K Sbjct: 384 LDAK 387
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 38.1 bits (87), Expect = 0.052 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAEDALRD 330 RLYVGNL +T+ +L + F G + +V V + GFAF+ +A++A+R Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 331 LDG 339 DG Sbjct: 175 FDG 177
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 38.1 bits (87), Expect = 0.052 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAF 285 G+P R D R+YVGNL V LE F G + S V + GF F Sbjct: 135 GSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGF 194 Query: 286 IDFDDKRDAEDALRDLDGK 342 + + + DA+ LDG+ Sbjct: 195 VTMSSESEVNDAIAALDGQ 213
>Q9DDY9:PAB2A_XENLA Polyadenylate-binding protein 2-A - Xenopus laevis (African clawed| frog) Length = 296 Score = 38.1 bits (87), Expect = 0.052 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D TA ELE F G + V + P GFA+I+F DK +L Sbjct: 165 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSL 221
>Q9GRX4:NONA_DROLR Protein no-on-transient A - Drosophila littoralis (Fruit fly)| Length = 698 Score = 38.1 bits (87), Expect = 0.052 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 RLYVGNL +T EL + F+ +G + ++ + F F+ D +AE A R LDG Sbjct: 282 RLYVGNLTNDITDEELREMFKPYGEIGEIF-SNLEKNFTFLKVDYHINAEKAKRALDG 338
>P27484:GRP2_NICSY Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco)| Length = 214 Score = 38.1 bits (87), Expect = 0.052 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +1 Query: 454 CYECGESGHFARECRLRIGAGG 519 C++CGESGHFAR+C G GG Sbjct: 159 CFKCGESGHFARDCSQSGGGGG 180 Score = 35.4 bits (80), Expect = 0.33 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +1 Query: 454 CYECGESGHFAREC 495 CY+CGE GHFAREC Sbjct: 196 CYKCGEDGHFAREC 209
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 38.1 bits (87), Expect = 0.052 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAED 318 + +A LYVG+L VT L ++F G + S+ V R + G+A+I+F DAE Sbjct: 8 YPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 34.7 bits (78), Expect = 0.57 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK---PPGFAFIDFDDKR 306 + R + + LYV NLD + L EF +G + S V + GF F+ F Sbjct: 285 QERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPE 344 Query: 307 DAEDALRDLDGK 342 +A A+ +++G+ Sbjct: 345 EATKAVTEMNGR 356 Score = 30.8 bits (68), Expect = 8.2 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Frame = +1 Query: 136 RRRRDL------FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAF 285 RR R+L +Y+ N + L + F FG SV V + GF F Sbjct: 176 RRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGF 235 Query: 286 IDFDDKRDAEDALRDLDGK--NGWRVELSR 369 +++ + +A+ A+ +++GK NG + + R Sbjct: 236 VNYGNHEEAQKAVSEMNGKEVNGRMIYVGR 265
>Q9HEQ9:TCG1_SCHPO Single-stranded TG1-3 DNA-binding protein - Schizosaccharomyces| pombe (Fission yeast) Length = 348 Score = 37.7 bits (86), Expect = 0.067 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Frame = +1 Query: 133 PRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK---------PPGFAF 285 P ++ D F R++VG L E+ F G +R V + + P G AF Sbjct: 37 PAQQADDF---RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAF 93 Query: 286 IDFDDKRDAEDALRDLDGK 342 + F+++ D + A+ L+GK Sbjct: 94 VTFNNQEDVDKAIETLNGK 112
>Q10193:SRP1_SCHPO Pre-mRNA-splicing factor srp1 - Schizosaccharomyces pombe (Fission| yeast) Length = 275 Score = 37.7 bits (86), Expect = 0.067 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = +1 Query: 142 RRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRD 309 RR L T LYV + A EL EF FG L + R FAF++++D RD Sbjct: 3 RRSLRT---LYVTGFRDGMRARELAYEFEPFGPLIRCDIPIPRTRTSRPFAFVEYEDSRD 59 Query: 310 AEDALRDLDGK 342 AEDA ++ G+ Sbjct: 60 AEDAYYEVHGR 70
>P17133:RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa - Drosophila melanogaster| (Fruit fly) Length = 448 Score = 37.7 bits (86), Expect = 0.067 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRDL 333 L++ ++ + +L EF +G ++ + + KP G+AFI+++ +RD A + Sbjct: 104 LFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHA 163 Query: 334 DGK 342 DGK Sbjct: 164 DGK 166
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 37.7 bits (86), Expect = 0.067 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Frame = +1 Query: 157 TMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDD 300 T+ +L+VG + + +L D F+ +G + S + RK GFAF++FDD Sbjct: 106 TVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDD 158
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 37.7 bits (86), Expect = 0.067 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Frame = +1 Query: 109 PPTNGAPAPRRR-------------RDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRS 249 P T GAP + DL RL+V NL T +LE F +G L Sbjct: 371 PTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSE 430 Query: 250 VW-----VARKPPGFAFIDFDDKRDAEDALRDLDGK 342 + + +KP GFAFI F A A ++DG+ Sbjct: 431 LHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466 Score = 34.7 bits (78), Expect = 0.57 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Frame = +1 Query: 157 TMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPG------FAFIDFDDKRDAED 318 T +++ V N+ + + E+ + F FG L++V + +K G F F+DF K+DA+ Sbjct: 830 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 889 Query: 319 ALRDL 333 A L Sbjct: 890 AFNAL 894
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 37.7 bits (86), Expect = 0.067 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAED 318 + +A LYVG+L VT L ++F G + S+ V R + G+A+I+F DAE Sbjct: 8 YPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 36.6 bits (83), Expect = 0.15 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Frame = +1 Query: 136 RRRRDLFTMAR------LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPG----FAF 285 RR R+ AR +YV NL V L+D F FG + SV V R G F F Sbjct: 176 RREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGF 235 Query: 286 IDFDDKRDAEDALRDLDGK 342 ++F+ +A+ A+ ++GK Sbjct: 236 VNFEKHEEAQKAVVHMNGK 254 Score = 36.6 bits (83), Expect = 0.15 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARK---PPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + +L EF +GV+ S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356
>Q01560:NOP3_YEAST Nucleolar protein 3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 414 Score = 37.7 bits (86), Expect = 0.067 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = +1 Query: 127 PAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKR 306 P R+ + RL+V V EL + F FG ++ V + GFAF++F++ Sbjct: 113 PMHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILN---GFAFVEFEEAE 169 Query: 307 DAEDALRDLDGKN 345 A A+ ++ GK+ Sbjct: 170 SAAKAIEEVHGKS 182
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 37.7 bits (86), Expect = 0.067 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGKN 345 L+V NL VT LE F FG L V +K +AFI FD++ A A+ +++GK+ Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERV---KKLKDYAFIHFDERDGAVKAMEEMNGKD 305
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 37.7 bits (86), Expect = 0.067 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGKN 345 L+V NL VT LE F FG L V +K +AFI FD++ A A+ +++GK+ Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERV---KKLKDYAFIHFDERDGAVKAMEEMNGKD 395
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 37.7 bits (86), Expect = 0.067 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAED 318 + +A LY+G+L VT L ++F G + S+ V R + G+A+I+F DAE Sbjct: 8 YPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 34.7 bits (78), Expect = 0.57 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK---PPGFAFIDFDDKR 306 + R + + LYV NLD + L EF +G + S V + GF F+ F Sbjct: 285 QERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHSKGFGFVCFSSPE 344 Query: 307 DAEDALRDLDGK 342 +A A+ +++G+ Sbjct: 345 EATKAVTEMNGR 356 Score = 32.0 bits (71), Expect = 3.7 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 12/90 (13%) Frame = +1 Query: 136 RRRRDL------FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAF 285 RR R+L +Y+ N + L++ F FG SV V + + GF F Sbjct: 176 RRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGF 235 Query: 286 IDFDDKRDAEDALRDLDGK--NGWRVELSR 369 +++ + +A+ A+ +++GK NG V + R Sbjct: 236 VNYGNHEEAQKAVTEMNGKEVNGRMVYVGR 265
>P62634:CNBP_RAT Cellular nucleic acid-binding protein - Rattus norvegicus (Rat)| Length = 177 Score = 37.7 bits (86), Expect = 0.067 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGA 513 S++ CY CGESGH AREC + A Sbjct: 154 SEVNCYRCGESGHLARECTIEATA 177 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGAG 516 S +C++CG SGH+AREC G G Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRG 26 Score = 33.1 bits (74), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 454 CYECGESGHFARECRLR 504 CY CGESGH A++C L+ Sbjct: 54 CYRCGESGHLAKDCDLQ 70
>Q5R5R5:CNBP_PONPY Cellular nucleic acid-binding protein - Pongo pygmaeus (Orangutan)| Length = 177 Score = 37.7 bits (86), Expect = 0.067 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGA 513 S++ CY CGESGH AREC + A Sbjct: 154 SEVNCYRCGESGHLARECTIEATA 177 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGAG 516 S +C++CG SGH+AREC G G Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRG 26 Score = 33.1 bits (74), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 454 CYECGESGHFARECRLR 504 CY CGESGH A++C L+ Sbjct: 54 CYRCGESGHLAKDCDLQ 70
>P53996:CNBP_MOUSE Cellular nucleic acid-binding protein - Mus musculus (Mouse)| Length = 178 Score = 37.7 bits (86), Expect = 0.067 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGA 513 S++ CY CGESGH AREC + A Sbjct: 155 SEVNCYRCGESGHLARECTIEATA 178 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGAG 516 S +C++CG SGH+AREC G G Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRG 26 Score = 33.1 bits (74), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 454 CYECGESGHFARECRLR 504 CY CGESGH A++C L+ Sbjct: 54 CYRCGESGHLAKDCDLQ 70
>P62633:CNBP_HUMAN Cellular nucleic acid-binding protein - Homo sapiens (Human)| Length = 177 Score = 37.7 bits (86), Expect = 0.067 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGA 513 S++ CY CGESGH AREC + A Sbjct: 154 SEVNCYRCGESGHLARECTIEATA 177 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGAG 516 S +C++CG SGH+AREC G G Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRG 26 Score = 33.1 bits (74), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 454 CYECGESGHFARECRLR 504 CY CGESGH A++C L+ Sbjct: 54 CYRCGESGHLAKDCDLQ 70
>O42395:CNBP_CHICK Cellular nucleic acid-binding protein - Gallus gallus (Chicken)| Length = 172 Score = 37.7 bits (86), Expect = 0.067 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGA 513 S++ CY CGESGH AREC + A Sbjct: 149 SEVNCYRCGESGHLARECTIEATA 172 Score = 35.4 bits (80), Expect = 0.33 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGAG 516 S +C++CG +GH+AREC IG G Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRG 26 Score = 33.1 bits (74), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 454 CYECGESGHFARECRLR 504 CY CGESGH A++C L+ Sbjct: 48 CYRCGESGHLAKDCDLQ 64 Score = 30.8 bits (68), Expect = 8.2 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 Query: 445 DMKCYECGESGHFARECR 498 D CY CG GH A++C+ Sbjct: 66 DKACYNCGRGGHIAKDCK 83
>Q3T0Q6:CNBP_BOVIN Cellular nucleic acid-binding protein - Bos taurus (Bovine)| Length = 170 Score = 37.7 bits (86), Expect = 0.067 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGA 513 S++ CY CGESGH AREC + A Sbjct: 147 SEVNCYRCGESGHLARECTIEATA 170 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 442 SDMKCYECGESGHFARECRLRIGAG 516 S +C++CG SGH+AREC G G Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRG 26 Score = 33.1 bits (74), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 454 CYECGESGHFARECRLR 504 CY CGESGH A++C L+ Sbjct: 47 CYRCGESGHLAKDCDLQ 63
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 37.4 bits (85), Expect = 0.088 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKRDAEDALRDL 333 +L++G L+ L+ F G + V + + K GFAFI F++ DA++A +D+ Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68 Query: 334 DGKN 345 +GK+ Sbjct: 69 NGKS 72
>Q8ITY4:PM14_CAEEL Pre-mRNA branch site p14-like protein - Caenorhabditis elegans| Length = 138 Score = 37.4 bits (85), Expect = 0.088 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR--KPPGFAFIDFDDKRDAEDALRDLDGK 342 LY+ NL ++T E+ + F FG +R + V + G AF+ ++D DA+ A L G Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSGY 80 Query: 343 N 345 N Sbjct: 81 N 81
>Q28ZX3:PABP2_DROPS Polyadenylate-binding protein 2 - Drosophila pseudoobscura (Fruit| fly) Length = 225 Score = 37.4 bits (85), Expect = 0.088 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D +A ELE F G + V + P GFA+I+F K E AL Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>Q7KNF2:PABP2_DROME Polyadenylate-binding protein 2 - Drosophila melanogaster (Fruit| fly) Length = 224 Score = 37.4 bits (85), Expect = 0.088 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDAL 324 +YVGN+D +A ELE F G + V + P GFA+I+F K E AL Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 37.4 bits (85), Expect = 0.088 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAED 318 + MA LYVG+L T L ++F G + S+ + R+ G+A+++F DAE Sbjct: 8 YPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Query: 319 AL 324 AL Sbjct: 68 AL 69 Score = 35.4 bits (80), Expect = 0.33 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L+D F FG SV V + K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GK--NGWRVELSR 369 GK NG ++ + R Sbjct: 253 GKELNGKQIYVGR 265 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLDG 339 LYV NLD + L EF FG + S V + GF F+ F +A A+ +++G Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 Query: 340 K 342 + Sbjct: 356 R 356 Score = 31.2 bits (69), Expect = 6.3 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALRD 330 + +++ NLD + L D F FG + S V G+ F+ F+ + AE A+ Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 157 Query: 331 LDG 339 ++G Sbjct: 158 MNG 160
>P40565:IST3_YEAST U2 snRNP component IST3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 148 Score = 37.4 bits (85), Expect = 0.088 Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 5/64 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALR 327 A +Y+GNL+ +T G++ F +GV V ++R + GFA++ ++D+R A+ Sbjct: 31 AYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVD 90 Query: 328 DLDG 339 +L+G Sbjct: 91 NLNG 94
>P78795:IF34_SCHPO Probable eukaryotic translation initiation factor 3 RNA-binding| subunit - Schizosaccharomyces pombe (Fission yeast) Length = 282 Score = 37.4 bits (85), Expect = 0.088 Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 5/77 (6%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDD 300 +R RD A L V NL EL D FR FG ++ V++A+ + GFAF+ + D Sbjct: 195 KRERD--DSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYD 252 Query: 301 KRDAEDALRDLDGKNGW 351 + A A LDG GW Sbjct: 253 RDCAIKARDRLDG-YGW 268
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 37.4 bits (85), Expect = 0.088 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGKN 345 L+V NL VT LE F FG L V +K +AFI FD++ A A+ +++GK+ Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERV---KKLKDYAFIHFDERDGAVKAMEEMNGKD 395
>Q04832:HEXP_LEIMA DNA-binding protein HEXBP - Leishmania major| Length = 271 Score = 37.4 bits (85), Expect = 0.088 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +1 Query: 445 DMKCYECGESGHFAREC 495 D KCY+CGESGH +REC Sbjct: 195 DRKCYKCGESGHMSREC 211 Score = 32.7 bits (73), Expect = 2.2 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +1 Query: 445 DMKCYECGESGHFAREC 495 D CY+CGE+GH +R+C Sbjct: 252 DRTCYKCGEAGHISRDC 268 Score = 32.0 bits (71), Expect = 3.7 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Frame = +1 Query: 454 CYECGESGHFAREC--RLRIGAGG 519 C+ CGE GH +REC R GA G Sbjct: 45 CFRCGEEGHMSRECPNEARSGAAG 68 Score = 31.6 bits (70), Expect = 4.8 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +1 Query: 445 DMKCYECGESGHFAREC 495 D CY+CG++GH +R+C Sbjct: 139 DRTCYKCGDAGHISRDC 155 Score = 31.6 bits (70), Expect = 4.8 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +1 Query: 445 DMKCYECGESGHFAREC 495 D CY+CG++GH +R+C Sbjct: 167 DRTCYKCGDAGHISRDC 183 Score = 31.6 bits (70), Expect = 4.8 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 Query: 445 DMKCYECGESGHFAREC 495 D CY+CG+ GH +REC Sbjct: 221 DRACYKCGKPGHISREC 237 Score = 30.8 bits (68), Expect = 8.2 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +1 Query: 448 MKCYECGESGHFAREC 495 M C+ CGE+GH +R+C Sbjct: 70 MTCFRCGEAGHMSRDC 85
>Q5R7X2:SR140_PONPY U2-associated protein SR140 - Pongo pygmaeus (Orangutan)| Length = 1028 Score = 37.0 bits (84), Expect = 0.11 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA--------RKPPGFAFIDFDDKRDAEDAL 324 LY+GN++ ++ L EF FG L SV + + F+ F ++RDAE AL Sbjct: 275 LYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERAL 334 Query: 325 RDLDGK 342 ++L+GK Sbjct: 335 KNLNGK 340
>O15042:SR140_HUMAN U2-associated protein SR140 - Homo sapiens (Human)| Length = 1029 Score = 37.0 bits (84), Expect = 0.11 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA--------RKPPGFAFIDFDDKRDAEDAL 324 LY+GN++ ++ L EF FG L SV + + F+ F ++RDAE AL Sbjct: 276 LYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERAL 335 Query: 325 RDLDGK 342 ++L+GK Sbjct: 336 KNLNGK 341
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 37.0 bits (84), Expect = 0.11 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 333 M +L++GNL T E+ F +G + + + + F+ +DK AEDA+R+L Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNL 55
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 37.0 bits (84), Expect = 0.11 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Frame = +1 Query: 142 RRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKR 306 R D +++VG + EL + F+ FGV+ V + ++P GF FI F+D++ Sbjct: 106 RSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQ 165 Query: 307 DAEDAL----RDLDGKNGWRVELSR 369 + A+ D+ GK +VE+ R Sbjct: 166 SVDQAVNMHFHDIMGK---KVEVKR 187
>Q09295:YQO4_CAEEL Putative RNA-binding protein EEED8.4 - Caenorhabditis elegans| Length = 191 Score = 36.6 bits (83), Expect = 0.15 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +++GN+D T E+E+ F+ G + + +K FA+I+FDD E+AL Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>Q6NV83:SR140_MOUSE U2-associated protein SR140 - Mus musculus (Mouse)| Length = 1029 Score = 36.6 bits (83), Expect = 0.15 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA--------RKPPGFAFIDFDDKRDAEDAL 324 LY+GN++ ++ L EF FG L SV + + F+ F +RDAE AL Sbjct: 276 LYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMSRRDAERAL 335 Query: 325 RDLDGK 342 ++L+GK Sbjct: 336 KNLNGK 341
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 36.6 bits (83), Expect = 0.15 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Frame = +1 Query: 130 APRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK------PPGFAFID 291 A +++ A ++VGNLD V L D F FGV+ V + GFAFI+ Sbjct: 89 ASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFIN 148 Query: 292 FDDKRDAEDALRDLDGK 342 F ++ AL ++G+ Sbjct: 149 FASFEASDTALEAMNGQ 165
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 36.6 bits (83), Expect = 0.15 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = +1 Query: 127 PAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP----GFAFIDF 294 P ++ + ARL + NL + + +L+ F FG + V + RKP GF F+ F Sbjct: 102 PKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQF 161 Query: 295 DDKRDAEDALRDLDGK 342 + +A AL+ ++ K Sbjct: 162 KNLLEAGKALKGMNMK 177
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 36.6 bits (83), Expect = 0.15 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Frame = +1 Query: 148 DLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW-----VARKPPGFAFIDFDDKRDA 312 DL RL+V NL + +LE F +G L + + +KP GFAF+ F A Sbjct: 395 DLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 454 Query: 313 EDALRDLDGK 342 A ++DG+ Sbjct: 455 VKAYAEVDGQ 464 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Frame = +1 Query: 157 TMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPG------FAFIDFDDKRDAED 318 T +++ V N+ + E+ + F FG L++V + +K G F F+DF K+DA+ Sbjct: 822 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKK 881 Query: 319 ALRDL 333 A L Sbjct: 882 AFNAL 886
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 36.6 bits (83), Expect = 0.15 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 MA LYVG+L V L D+F G + S+ V R+ G+A+++F DAE AL Sbjct: 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60 Score = 32.0 bits (71), Expect = 3.7 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Frame = +1 Query: 127 PAPRRRRDLFTMARL----YVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPG----FA 282 P R ++L A+L YV N +L++ F +G + S V K G F Sbjct: 167 PRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFG 226 Query: 283 FIDFDDKRDAEDALRDLDGKN 345 F+ F+ AE A++ L+GK+ Sbjct: 227 FVAFETTEAAEAAVQALNGKD 247
>Q8CGX0:IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 - Rattus| norvegicus (Rat) Length = 577 Score = 36.6 bits (83), Expect = 0.15 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL+ VT +LE F + S K G+AF+D D+ A A+ G Sbjct: 1 MNKLYIGNLNESVTPADLEKVFAEHKISYSGQFLVK-SGYAFVDCPDEHWAMKAIETFSG 59 Query: 340 K---NGWRVELSRN 372 K G R+E+ + Sbjct: 60 KVELQGKRLEIEHS 73
>O88477:IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 - Mus musculus| (Mouse) Length = 577 Score = 36.6 bits (83), Expect = 0.15 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL+ VT +LE F + S K G+AF+D D+ A A+ G Sbjct: 1 MNKLYIGNLNESVTPADLEKVFAEHKISYSGQFLVK-SGYAFVDCPDEHWAMKAIETFSG 59 Query: 340 K---NGWRVELSRN 372 K G R+E+ + Sbjct: 60 KVELQGKRLEIEHS 73
>Q9NZI8:IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 - Homo sapiens| (Human) Length = 577 Score = 36.6 bits (83), Expect = 0.15 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL+ VT +LE F + S K G+AF+D D+ A A+ G Sbjct: 1 MNKLYIGNLNESVTPADLEKVFAEHKISYSGQFLVK-SGYAFVDCPDEHWAMKAIETFSG 59 Query: 340 K---NGWRVELSRN 372 K G R+E+ + Sbjct: 60 KVELQGKRLEIEHS 73
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 36.6 bits (83), Expect = 0.15 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 L+V NL VT LE F FG L V +K +AF+ F+D+ A A+ +++GK Sbjct: 343 LFVRNLATTVTEEILEKSFSEFGKLERV---KKLKDYAFVHFEDRGAAVKAMDEMNGK 397
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 36.6 bits (83), Expect = 0.15 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%) Frame = +1 Query: 142 RRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKR 306 R D +++VG + EL + F+ FGV+ V + ++P GF FI F+D++ Sbjct: 106 RSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQ 165 Query: 307 DAEDAL----RDLDGKNGWRVELSR 369 + A+ D+ GK +VE+ R Sbjct: 166 SVDQAVNMHFHDIMGK---KVEVKR 187
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 36.6 bits (83), Expect = 0.15 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L++G L+ LE F +G + V V + + GF F+ F++ DA+DA+ Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 331 LDGKN 345 ++GK+ Sbjct: 66 MNGKS 70
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 36.6 bits (83), Expect = 0.15 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L LE F +G + V V + + GF F+ F++ DA+DA+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 331 LDGKN 345 ++GK+ Sbjct: 67 MNGKS 71
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 36.6 bits (83), Expect = 0.15 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L LE F +G + V V + + GF F+ F++ DA+DA+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 331 LDGKN 345 ++GK+ Sbjct: 67 MNGKS 71
>Q8VIJ6:SFPQ_MOUSE Splicing factor, proline- and glutamine-rich - Mus musculus (Mouse)| Length = 699 Score = 36.2 bits (82), Expect = 0.20 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 RL+VGNL A +T E + F +G V++ K GF FI + + AE A +LD Sbjct: 290 RLFVGNLPADITEDEFKRLFAKYGEPGEVFI-NKGKGFGFIKLESRALAEIAKAELD 345
>P23246:SFPQ_HUMAN Splicing factor, proline- and glutamine-rich - Homo sapiens (Human)| Length = 707 Score = 36.2 bits (82), Expect = 0.20 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 RL+VGNL A +T E + F +G V++ K GF FI + + AE A +LD Sbjct: 298 RLFVGNLPADITEDEFKRLFAKYGEPGEVFI-NKGKGFGFIKLESRALAEIAKAELD 353
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 36.2 bits (82), Expect = 0.20 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YVGNL R T +L+ F +G ++ V + + GFAF++ ++ + A+ +L Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 334 DG 339 DG Sbjct: 63 DG 64
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 36.2 bits (82), Expect = 0.20 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L+ LED F FG + V V + + GF FI F + A A+R Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 331 LDGKN 345 ++G++ Sbjct: 67 MNGES 71
>Q27K34:PLA2_ORYSA Protein terminal ear1 homolog - Oryza sativa (Rice)| Length = 683 Score = 36.2 bits (82), Expect = 0.20 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 208 ELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK 342 EL + F+ +G ++ V + P F++F D RDA+ AL +L+GK Sbjct: 237 ELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGK 281
>O14327:PAB2_SCHPO Polyadenylate-binding protein 2 - Schizosaccharomyces pombe| (Fission yeast) Length = 166 Score = 36.2 bits (82), Expect = 0.20 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFA 282 N A R ++ +YVGN+D VT EL+ F G + V + P GFA Sbjct: 40 NETEALRNDKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFA 99 Query: 283 FIDFDDKRDAEDAL 324 +I+F + +AL Sbjct: 100 YIEFSEPSLVPNAL 113
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 36.2 bits (82), Expect = 0.20 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDALR 327 +RL+V NL + +LE F FG + + VA GFA++ + + A A + Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYK 360 Query: 328 DLDGKN 345 +LDGK+ Sbjct: 361 ELDGKH 366
>Q38896:GRP2B_ARATH Glycine-rich protein 2b - Arabidopsis thaliana (Mouse-ear cress)| Length = 201 Score = 36.2 bits (82), Expect = 0.20 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 448 MKCYECGESGHFAREC 495 + CY CGESGHFAR+C Sbjct: 180 LSCYSCGESGHFARDC 195 Score = 33.5 bits (75), Expect = 1.3 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 445 DMKCYECGESGHFARECRLRIGAGG 519 D C++CGE GH AREC G GG Sbjct: 135 DNSCFKCGEPGHMARECSQ--GGGG 157
>Q10572:FOX1_CAEEL Sex determination protein fox-1 - Caenorhabditis elegans| Length = 415 Score = 36.2 bits (82), Expect = 0.20 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDALRDLD 336 RL+V N+ R +L+ F FGV+ V + R GF F+ + +DAE A ++L Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213 Query: 337 GK--NGWRVELS 366 G G ++E++ Sbjct: 214 GSMIEGRKIEVN 225
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 36.2 bits (82), Expect = 0.20 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L LE F +G + V V + + GF F+ F++ DA+DA+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 331 LDGKN 345 ++GK+ Sbjct: 67 MNGKS 71
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 36.2 bits (82), Expect = 0.20 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L LE F +G + V V + + GF F+ F++ DA+DA+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 331 LDGKN 345 ++GK+ Sbjct: 67 MNGKS 71
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 36.2 bits (82), Expect = 0.20 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 +L+VG L LE F +G + V V + + GF F+ F++ DA+DA+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 331 LDGKN 345 ++GK+ Sbjct: 67 MNGKS 71
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 35.8 bits (81), Expect = 0.26 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%) Frame = +1 Query: 130 APRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGV-LRSVWVARKP-----PGFAFID 291 A ++L A +++GNLD + L D F FGV L++ + R P G+AFI+ Sbjct: 89 ASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFIN 148 Query: 292 FDDKRDAEDALRDLDGK 342 F ++ A+ ++G+ Sbjct: 149 FASFDASDAAIEAMNGQ 165
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 35.8 bits (81), Expect = 0.26 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKRDAEDALRD 330 L+V NLD V +LE+EF +G + S V R K GF F+ F +A A+ + Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381
>Q5SF07:IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 - Mus musculus| (Mouse) Length = 592 Score = 35.8 bits (81), Expect = 0.26 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL VTA +L F + + V K G+AF+D+ D+ A A+ L G Sbjct: 2 MNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK-SGYAFVDYPDQNWAIRAIETLSG 60 Query: 340 K 342 K Sbjct: 61 K 61
>Q9Y6M1:IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 - Homo sapiens| (Human) Length = 556 Score = 35.8 bits (81), Expect = 0.26 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL VTA +L F + + V K G+AF+D+ D+ A A+ L G Sbjct: 2 MNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK-SGYAFVDYPDQNWAIRAIETLSG 60 Query: 340 K 342 K Sbjct: 61 K 61
>Q08CK7:IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 598 Score = 35.8 bits (81), Expect = 0.26 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL+ +VTA +L F + + S K G+A +D D + A A+ G Sbjct: 1 MNKLYIGNLNEKVTAEDLVKTFEDYKIPYSGQFLMK-TGYASVDCPDDQWAMKAIETFSG 59 Query: 340 K---NGWRVELSRN 372 K +G R+E+ + Sbjct: 60 KVELHGKRIEVEHS 73
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 35.8 bits (81), Expect = 0.26 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 9/95 (9%) Frame = +1 Query: 112 PTNGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPG 276 P G R + +++VG + EL++ F FGV+ V + ++P G Sbjct: 97 PREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRG 156 Query: 277 FAFIDFDDKRDAEDAL----RDLDGKNGWRVELSR 369 F FI F+D++ + A+ D+ GK +VE+ R Sbjct: 157 FGFITFEDEQSVDQAVNMHFHDIMGK---KVEVKR 188
>Q09301:YQOC_CAEEL Putative RNA-binding protein EEED8.12 - Caenorhabditis elegans| Length = 197 Score = 35.4 bits (80), Expect = 0.33 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDAL 324 +++GN+D T E+E+ F+ G + + +K FA+I+FDD E+AL Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 35.4 bits (80), Expect = 0.33 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDL 333 +L++ L T ELED + G ++ + + A KP G A+++++++ A A+ + Sbjct: 802 KLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 861 Query: 334 DG 339 DG Sbjct: 862 DG 863
>Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Arabidopsis thaliana| (Mouse-ear cress) Length = 427 Score = 35.4 bits (80), Expect = 0.33 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDALRDL 333 L+V L+ + +++ EF +G ++ V + KP G+AFI++ RD + A + Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199 Query: 334 DGK 342 DG+ Sbjct: 200 DGQ 202
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 35.4 bits (80), Expect = 0.33 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDLD 336 +Y+ N + L+D F FG SV V + K GF F+ F+ DA+ A+ +++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252 Query: 337 GK--NGWRVELSR 369 GK NG ++ + R Sbjct: 253 GKELNGKQIYVGR 265 Score = 34.3 bits (77), Expect = 0.74 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = +1 Query: 154 FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV---ARKPPGFAFIDFDDKRDAEDAL 324 + + LYV NLD + L F FG + S V + GF F+ F +A A+ Sbjct: 291 YQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 350 Query: 325 RDLDGK 342 +++G+ Sbjct: 351 TEMNGR 356
>Q9UT83:MUG28_SCHPO Meiotically up-regulated gene 28 protein - Schizosaccharomyces| pombe (Fission yeast) Length = 609 Score = 35.4 bits (80), Expect = 0.33 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 10/69 (14%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV----------ARKPPGFAFIDFDDKRDAED 318 +YVGNL + + +L + F FG + ++ P FAFI F++K A++ Sbjct: 22 IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSADN 81 Query: 319 ALRDLDGKN 345 A+ L+G + Sbjct: 82 AIASLNGSS 90
>Q19706:IF34_CAEEL Probable eukaryotic translation initiation factor 3 subunit 4 -| Caenorhabditis elegans Length = 256 Score = 35.4 bits (80), Expect = 0.33 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Frame = +1 Query: 118 NGAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK-----PPGFA 282 +G R R D T V NL + EL D F G + +++AR P GFA Sbjct: 164 DGRQIDRNRSDENTCR---VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFA 220 Query: 283 FIDFDDKRDAEDALRDLD 336 F+ F+ + DA A+ +L+ Sbjct: 221 FVTFESRDDAARAIAELN 238
>O42254:IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 - Gallus gallus| (Chicken) Length = 576 Score = 35.4 bits (80), Expect = 0.33 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL+ VT +LE F + S K G+AF+D D++ A A+ G Sbjct: 1 MNKLYIGNLNESVTPADLEKVFNDHKISFSGQFLVK-SGYAFVDCPDEQWAMKAIETFSG 59 Query: 340 K 342 K Sbjct: 60 K 60
>P97855:G3BP1_MOUSE Ras GTPase-activating protein-binding protein 1 - Mus musculus| (Mouse) Length = 465 Score = 35.4 bits (80), Expect = 0.33 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = +1 Query: 121 GAPAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV--ARKPPGFAFIDF 294 G PRR +L++GNL V EL+D F+ FG + + + K P F F+ F Sbjct: 324 GDVEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVF 383 Query: 295 DDKRDAEDAL 324 DD + L Sbjct: 384 DDSEPVQKVL 393
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 35.0 bits (79), Expect = 0.44 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRDL 333 LYV NL +T ELE F +G + + R KP G AF+ F+ + +A++A+ L Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232 Query: 334 D 336 + Sbjct: 233 N 233
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 35.0 bits (79), Expect = 0.44 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 +RL+VGNL +T E+ F +G V++ K GF FI + + AE A +LD Sbjct: 79 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-HKDKGFGFIRLETRTLAEIAKVELD 135
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 35.0 bits (79), Expect = 0.44 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 +RL+VGNL +T E+ F +G V++ K GF FI + + AE A +LD Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-HKDKGFGFIRLETRTLAEIAKVELD 130
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 35.0 bits (79), Expect = 0.44 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 +RL+VGNL +T E+ F +G V++ K GF FI + + AE A +LD Sbjct: 76 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-HKDKGFGFIRLETRTLAEIAKVELD 132
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 35.0 bits (79), Expect = 0.44 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLD 336 +RL+VGNL +T E+ F +G V++ K GF FI + + AE A +LD Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-HKDKGFGFIRLETRTLAEIAKVELD 130
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 35.0 bits (79), Expect = 0.44 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 12/77 (15%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP----------GFAFIDFDDKRDAED 318 +++ NL+ + T+ +L D F+VF V KP GF F++F K A Sbjct: 642 IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQATA 701 Query: 319 ALRDLDGK--NGWRVEL 363 + +DG +G +++L Sbjct: 702 VISAMDGTVIDGHKIQL 718
>Q9JJ43:A2BP1_MOUSE Ataxin-2-binding protein 1 - Mus musculus (Mouse)| Length = 396 Score = 35.0 bits (79), Expect = 0.44 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%) Frame = +1 Query: 112 PTNGAPAPRRRRDLFTMA---RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPP 273 PT+G P + + + + RL+V N+ R +L F FG + V + R Sbjct: 96 PTDGQPQTQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK 155 Query: 274 GFAFIDFDDKRDAEDALRDLDGK--NGWRVELS 366 GF F+ F++ DA+ A L G G ++E++ Sbjct: 156 GFGFVTFENSADADRAREKLHGTVVEGRKIEVN 188
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 34.7 bits (78), Expect = 0.57 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = +1 Query: 130 APRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDF 294 APR F R+YVGNL V G LE F G + V + GF F+ Sbjct: 236 APRVYEPAF---RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTM 292 Query: 295 DDKRDAEDALRDLDGKN 345 D + +A+ LDG+N Sbjct: 293 SDVDELNEAISALDGQN 309
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 34.7 bits (78), Expect = 0.57 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 +YVGNL VT L F +G ++ V + +P GF F++ + + A+ L Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEAL 62 Query: 334 DG 339 DG Sbjct: 63 DG 64
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 34.7 bits (78), Expect = 0.57 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP----GFAFIDFDDKRDAEDALRD 330 A LY+ NLD V +L++ F +G + S V P GF F+ + + +A AL + Sbjct: 332 ANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSE 391 Query: 331 LDGK 342 ++GK Sbjct: 392 MNGK 395 Score = 33.5 bits (75), Expect = 1.3 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKRDAEDALRDLD 336 +++ NLDA + L + F FG + S VA + G+ F+ F+ + A+ A+ L+ Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197 Query: 337 G 339 G Sbjct: 198 G 198 Score = 33.5 bits (75), Expect = 1.3 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Frame = +1 Query: 127 PAPRRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPG----FAFIDF 294 P PR +YV NL + EL F FGV+ S V R G F F++F Sbjct: 224 PTPR-------FTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNF 276 Query: 295 DDKRDAEDALRDLDG 339 + A A+ ++G Sbjct: 277 ECTEAAASAVEKMNG 291
>Q9NWB1:A2BP1_HUMAN Ataxin-2-binding protein 1 - Homo sapiens (Human)| Length = 397 Score = 34.7 bits (78), Expect = 0.57 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 8/93 (8%) Frame = +1 Query: 112 PTNGAPAPRRRRDLFTMA---RLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPP 273 PT+G P + + + RL+V N+ R +L F FG + V + R Sbjct: 97 PTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK 156 Query: 274 GFAFIDFDDKRDAEDALRDLDGK--NGWRVELS 366 GF F+ F++ DA+ A L G G ++E++ Sbjct: 157 GFGFVTFENSADADRAREKLHGTVVEGRKIEVN 189
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 34.3 bits (77), Expect = 0.74 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFG------VLRSVWVARKPPGFAFIDFDDKRDAEDALRD 330 LYV NL +T ELE F +G +LR R P G AF+ F+ + +A++A+ Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGR-PRGVAFVRFNKREEAQEAISA 248 Query: 331 LD 336 L+ Sbjct: 249 LN 250
>Q5XG24:RNPS1_XENLA RNA-binding protein with serine-rich domain 1 - Xenopus laevis| (African clawed frog) Length = 283 Score = 34.3 bits (77), Expect = 0.74 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVW--VARKPP----GFAFIDFD 297 +RR ++++G L VT + + F +G ++ + V R P G+A+++F+ Sbjct: 129 KRRSPSPRPTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFE 188 Query: 298 DKRDAEDALRDLDG 339 +AE AL+ +DG Sbjct: 189 APEEAEKALKHMDG 202
>Q9CQ49:NCBP2_MOUSE Nuclear cap-binding protein subunit 2 - Mus musculus (Mouse)| Length = 156 Score = 34.3 bits (77), Expect = 0.74 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDALRDL 333 LYVGNL T ++ + F G ++ + + + GF F+++ + DAE+A+R + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 334 DG 339 +G Sbjct: 102 NG 103
>P52298:NCBP2_HUMAN Nuclear cap-binding protein subunit 2 - Homo sapiens (Human)| Length = 156 Score = 34.3 bits (77), Expect = 0.74 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDALRDL 333 LYVGNL T ++ + F G ++ + + + GF F+++ + DAE+A+R + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 334 DG 339 +G Sbjct: 102 NG 103
>Q3ZBJ1:NCBP2_BOVIN Nuclear cap-binding protein subunit 2 - Bos taurus (Bovine)| Length = 156 Score = 34.3 bits (77), Expect = 0.74 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVA-----RKPPGFAFIDFDDKRDAEDALRDL 333 LYVGNL T ++ + F G ++ + + + GF F+++ + DAE+A+R + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 334 DG 339 +G Sbjct: 102 NG 103
>Q9PW80:IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 582 Score = 34.3 bits (77), Expect = 0.74 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GN+ + +A +LE F + + S K G+AF+D D++ A A+ L G Sbjct: 1 MNKLYIGNVSEQASALDLESIFEQWKIPFSAPFLVKS-GYAFVDCPDEKVAMRAIDTLSG 59 Query: 340 K 342 K Sbjct: 60 K 60
>Q5RB68:IF2B2_PONPY Insulin-like growth factor 2 mRNA-binding protein 2 - Pongo| pygmaeus (Orangutan) Length = 556 Score = 34.3 bits (77), Expect = 0.74 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +1 Query: 160 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 339 M +LY+GNL VT +L F + + V K G+AF+D+ D+ A A+ L G Sbjct: 2 MNKLYIGNLSPAVTVDDLRQLFGDRKLPLAGQVLLKS-GYAFVDYPDQNWAIRAIETLSG 60 Query: 340 K 342 K Sbjct: 61 K 61
>Q99181:HSH49_YEAST Protein HSH49 - Saccharomyces cerevisiae (Baker's yeast)| Length = 213 Score = 34.3 bits (77), Expect = 0.74 Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 5/58 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEF-RVFGVLRSVW----VARKPPGFAFIDFDDKRDAEDALR 327 +YVGN+D R+T +L + F ++ VLR + V + G+AFI+F ++ DA+ A++ Sbjct: 11 VYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIK 68
>Q5RB87:G3BP1_PONPY Ras GTPase-activating protein-binding protein 1 - Pongo pygmaeus| (Orangutan) Length = 466 Score = 34.3 bits (77), Expect = 0.74 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV--ARKPPGFAFIDFDDKRDAEDAL 324 +L++GNL V EL+D F+ +G + + + K P F F+ FDD + L Sbjct: 341 QLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVL 395
>Q13283:G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 - Homo sapiens| (Human) Length = 466 Score = 34.3 bits (77), Expect = 0.74 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV--ARKPPGFAFIDFDDKRDAEDAL 324 +L++GNL V EL+D F+ +G + + + K P F F+ FDD + L Sbjct: 341 QLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVL 395
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 34.3 bits (77), Expect = 0.74 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK---PPGFAFIDFDDKR 306 + R + + LYV NLD + L EF +G + S V + GF F+ F Sbjct: 285 QERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHSKGFGFVCFSSPE 344 Query: 307 DAEDALRDLDGK 342 +A A+ +++G+ Sbjct: 345 EATKAVTEMNGR 356 Score = 31.2 bits (69), Expect = 6.3 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 12/90 (13%) Frame = +1 Query: 136 RRRRDL------FTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAF 285 RR R+L +Y+ N + L + F FG SV V + + GF F Sbjct: 176 RRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGF 235 Query: 286 IDFDDKRDAEDALRDLDGK--NGWRVELSR 369 +++ + +A+ A+ +++GK NG + + R Sbjct: 236 VNYGNHEEAQKAVSEMNGKEVNGRMIYVGR 265
>Q6TY21:EPA2B_XENLA Embryonic polyadenylate-binding protein 2-B - Xenopus laevis| (African clawed frog) Length = 218 Score = 34.3 bits (77), Expect = 0.74 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Frame = +1 Query: 115 TNGAPAPRRRRDLFTMAR--LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPP 273 T G P P + + + +YVGN+D TA +LE F G + + + + P Sbjct: 75 TEGPPQPLSAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPK 134 Query: 274 GFAFIDFDDKRDAEDAL 324 G+A+I+F ++ + A+ Sbjct: 135 GYAYIEFAERNSVDAAV 151
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 34.3 bits (77), Expect = 0.74 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFG-VLRSVWVARKPPGF----AFIDFDDKRDAEDALR 327 A LY+ L +T ++ED F FG ++ S + + G AFI FD + +AE+A+ Sbjct: 106 ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAIT 165 Query: 328 DLDG 339 +G Sbjct: 166 SFNG 169
>P36629:U2AF2_SCHPO Splicing factor U2AF 59 kDa subunit - Schizosaccharomyces pombe| (Fission yeast) Length = 517 Score = 33.9 bits (76), Expect = 0.97 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVARK-----PPGFAFIDFDDKRDAEDALRD 330 ++Y+ NL + ++ + + FG L S + + GF F +F + DAE A+ Sbjct: 311 KIYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISG 370 Query: 331 LDGKN 345 LDGK+ Sbjct: 371 LDGKD 375
>P40561:SGN1_YEAST RNA-binding protein SGN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 250 Score = 33.9 bits (76), Expect = 0.97 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRDL 333 ++VGN+ VT ++ED F+ G ++ + + P G+ +I+F+ E AL+ Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLN 125 Query: 334 DGK-NGWRVELSR 369 G+ G ++ +SR Sbjct: 126 GGELKGKKIAVSR 138
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 33.9 bits (76), Expect = 0.97 Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDL 333 +L++ L T ELE+ + G ++ + + A KP G A+++++++ A A+ + Sbjct: 820 KLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 879 Query: 334 DG 339 DG Sbjct: 880 DG 881
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 33.9 bits (76), Expect = 0.97 Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV----ARKPPGFAFIDFDDKRDAEDALRDL 333 +L++ L T ELE+ + G ++ + + A KP G A+++++++ A A+ + Sbjct: 802 KLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 861 Query: 334 DG 339 DG Sbjct: 862 DG 863
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 33.9 bits (76), Expect = 0.97 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDKRDAEDALRD 330 R+YVGNL V LE F G + V + + GF F+ +D ++ ++A++ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264 Query: 331 LDG 339 LDG Sbjct: 265 LDG 267
>O43251:RBM9_HUMAN RNA-binding protein 9 - Homo sapiens (Human)| Length = 390 Score = 33.9 bits (76), Expect = 0.97 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Frame = +1 Query: 157 TMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVA---RKPPGFAFIDFDDKRDAEDALR 327 T RL+V N+ R +L F FG + V + R GF F+ F++ DA+ A Sbjct: 119 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 178 Query: 328 DLDGK--NGWRVELS 366 L G G ++E++ Sbjct: 179 KLHGTVVEGRKIEVN 193
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 33.9 bits (76), Expect = 0.97 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFG--VLRSVWVAR---KPPGFAFIDFDDKRDAEDALRD 330 +L++G L L D F FG V V V R + GF F++F+D+ A A+ + Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 331 LDGK--NGWRVELS 366 +DGK NG + ++ Sbjct: 96 MDGKELNGRHIRVN 109
>P35955:GAG_VILVK Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain KV1772) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 0.97 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 445 DMKCYECGESGHFARECR 498 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>P23425:GAG_VILV2 Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain 1514 / clone LV1-1KS2) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 0.97 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 445 DMKCYECGESGHFARECR 498 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>P23424:GAG_VILV1 Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain 1514 / clone LV1-1KS1) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 0.97 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 445 DMKCYECGESGHFARECR 498 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>P03352:GAG_VILV Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Maedi visna virus (strain 1514) (MVV) (Visna lentivirus) Length = 442 Score = 33.9 bits (76), Expect = 0.97 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 445 DMKCYECGESGHFARECR 498 + KCY CG+ GH AR+CR Sbjct: 384 NQKCYNCGKPGHLARQCR 401
>Q32LC7:G3BP1_BOVIN Ras GTPase-activating protein-binding protein 1 - Bos taurus| (Bovine) Length = 465 Score = 33.9 bits (76), Expect = 0.97 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWV--ARKPPGFAFIDFDDKRDAEDAL 324 +L++GNL V EL+D F+ +G + + + K P F F+ FDD + L Sbjct: 340 QLFIGNLPHEVDKSELKDFFQNYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVL 394
>Q804A5:EPA2A_XENLA Embryonic polyadenylate-binding protein 2-A - Xenopus laevis| (African clawed frog) Length = 218 Score = 33.9 bits (76), Expect = 0.97 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Frame = +1 Query: 115 TNGAPAPRRRRDLFTMAR--LYVGNLDARVTAGELEDEFRVFGVLRSVWV-----ARKPP 273 T G P P + + + +YVGN+D TA +LE F G + + + + P Sbjct: 75 TEGPPRPLSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPK 134 Query: 274 GFAFIDFDDKRDAEDAL 324 G+A+I+F ++ + A+ Sbjct: 135 GYAYIEFAERNSVDAAV 151
>Q1RKN3:TLH2_SCHPO ATP-dependent DNA helicase tlh2 - Schizosaccharomyces pombe (Fission| yeast) Length = 1919 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 454 CYECGESGHFARECRLRIGAGGL 522 CY+CG++ H REC+LRI GL Sbjct: 1806 CYKCGKADHNLRECKLRIRFQGL 1828
>Q5EAK4:TLH1_SCHPO ATP-dependent DNA helicase tlh1 - Schizosaccharomyces pombe (Fission| yeast) Length = 2100 Score = 33.5 bits (75), Expect = 1.3 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 454 CYECGESGHFARECRLRIGAGGL 522 CY+CG++ H REC+LRI GL Sbjct: 1987 CYKCGKADHNLRECKLRIRFQGL 2009
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 33.5 bits (75), Expect = 1.3 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP----GFAFIDFDDKRDAEDALRD 330 ARL + NL + + +L+ F +G + V + +KP GFAF+ F + +A AL+ Sbjct: 114 ARLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKG 173 Query: 331 LDGK 342 + K Sbjct: 174 ANMK 177
>P53849:GIS2_YEAST Zinc finger protein GIS2 - Saccharomyces cerevisiae (Baker's yeast)| Length = 153 Score = 33.5 bits (75), Expect = 1.3 Identities = 10/19 (52%), Positives = 16/19 (84%) Frame = +1 Query: 442 SDMKCYECGESGHFARECR 498 S +KCY CG++GH +R+C+ Sbjct: 114 SGLKCYTCGQAGHMSRDCQ 132
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAEDALR 327 A LYV L +T ELE F +G + + V G FI FD + +AE+A++ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 184 Query: 328 DLDGK 342 L+G+ Sbjct: 185 GLNGQ 189
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAEDALR 327 A LYV L +T ELE F +G + + V G FI FD + +AE+A++ Sbjct: 137 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 196 Query: 328 DLDGK 342 L+G+ Sbjct: 197 GLNGQ 201
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSV-----WVARKPPGFAFIDFDDKRDAEDALR 327 A LYV L +T ELE F +G + + V G FI FD + +AE+A++ Sbjct: 132 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 191 Query: 328 DLDGK 342 L+G+ Sbjct: 192 GLNGQ 196
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFG-VLRSVWVARKPPGFA----FIDFDDKRDAEDALR 327 A LYV L +T ELE F +G ++ S + + G + FI FD + +AE+A++ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 328 DLDGK 342 L+G+ Sbjct: 185 GLNGQ 189
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFG-VLRSVWVARKPPGFA----FIDFDDKRDAEDALR 327 A LYV L +T ELE F +G ++ S + + G + FI FD + +AE+A++ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 328 DLDGK 342 L+G+ Sbjct: 185 GLNGQ 189
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFG-VLRSVWVARKPPGFA----FIDFDDKRDAEDALR 327 A LYV L +T ELE F +G ++ S + + G + FI FD + +AE+A++ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 328 DLDGK 342 L+G+ Sbjct: 185 GLNGQ 189
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 33.5 bits (75), Expect = 1.3 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFG-VLRSVWVARKPPGFA----FIDFDDKRDAEDALR 327 A LYV L +T ELE F +G ++ S + + G + FI FD + +AE+A++ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 328 DLDGK 342 L+G+ Sbjct: 185 GLNGQ 189
>Q10422:YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01 - Schizosaccharomyces| pombe (Fission yeast) Length = 297 Score = 33.1 bits (74), Expect = 1.7 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKP-----PGFAFIDFDDKRDAEDALRDL 333 L+V + +R+ EL+ F FG + V + R+P GF F+ F +A A+ +L Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162 Query: 334 DGK 342 + + Sbjct: 163 NSQ 165
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 33.1 bits (74), Expect = 1.7 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVAR----KPPGFAFIDFDDKRDAEDALRDLD 336 +++ NLDA + L + F FG + S VA + G+ F+ F+ + A+ A+ L+ Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 193 Query: 337 G 339 G Sbjct: 194 G 194 Score = 31.2 bits (69), Expect = 6.3 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +1 Query: 163 ARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPP----GFAFIDFDDKRDAEDALRD 330 + LY+ NLD V +L++ F +G + S V GF F+ + + +A A+++ Sbjct: 328 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKE 387 Query: 331 LDGK 342 ++GK Sbjct: 388 MNGK 391
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 33.1 bits (74), Expect = 1.7 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAE 315 ++ RD T L NL +VT EL++ F +R V K G A+I+F + DAE Sbjct: 389 KKERDART---LLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAE 445 Query: 316 DALRDLDG 339 + G Sbjct: 446 KTFEEKQG 453
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 33.1 bits (74), Expect = 1.7 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAE 315 ++ RD T L NL +VT EL++ F +R V K G A+I+F + DAE Sbjct: 388 KKERDART---LLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAE 444 Query: 316 DALRDLDG 339 + G Sbjct: 445 KTFEEKQG 452
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 33.1 bits (74), Expect = 1.7 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAE 315 ++ RD T L NL +VT EL++ F +R V K G A+I+F + DAE Sbjct: 387 KKERDART---LLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAE 443 Query: 316 DALRDLDG 339 + G Sbjct: 444 KTFEEKQG 451
>P45429:SNRPA_XENLA U1 small nuclear ribonucleoprotein A - Xenopus laevis (African| clawed frog) Length = 282 Score = 32.7 bits (73), Expect = 2.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDE----FRVFGVLRSVWVAR--KPPGFAFIDFDDKRDAEDALRD 330 +Y+ NL+ ++ EL+ F FG + + V+R K G AF+ F + A +ALR Sbjct: 12 IYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFKETSSATNALRS 71 Query: 331 LDG 339 + G Sbjct: 72 MQG 74
>Q96T37:RBM15_HUMAN Putative RNA-binding protein 15 - Homo sapiens (Human)| Length = 977 Score = 32.7 bits (73), Expect = 2.2 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query: 169 LYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPG----FAFIDFDDKRDAEDALRDLD 336 L++GNLD VT +L F FGV+ V + R G + F+ F++ + A + Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMS 435 Query: 337 GK 342 GK Sbjct: 436 GK 437
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 32.7 bits (73), Expect = 2.2 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Frame = +1 Query: 166 RLYVGNLDARVTAGELEDEFRVFGVLRSVWVAR-----KPPGFAFIDFDDKRDAEDALRD 330 R +VG L ELE F FG + + + GF F+ F D++ +DA+ + Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 331 LDGK 342 ++GK Sbjct: 67 MNGK 70
>P16900:GAG_OMVVS Gag polyprotein [Contains: Core protein p16; Core protein p25; Core| protein p14] - Ovine maedi visna related virus (strain South Africa) (SA-OMVV) (Ovine lentivirus) Length = 446 Score = 32.7 bits (73), Expect = 2.2 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 451 KCYECGESGHFARECR 498 KCY CG+ GH AR+CR Sbjct: 385 KCYYCGKPGHLARQCR 400
>P19558:GAG_BIV29 Gag polyprotein - Bovine immunodeficiency virus (strain R29) (BIV)| (Bovine immunodeficiency-like virus) Length = 476 Score = 32.7 bits (73), Expect = 2.2 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 451 KCYECGESGHFARECRLRIG 510 KCY CG+ GH AR CR + G Sbjct: 422 KCYHCGKPGHQARNCRSKNG 441
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 32.7 bits (73), Expect = 2.2 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFG------VLRSVWVARKPPGFAFIDFD 297 R D A LYV L +T ELE F FG +L++ + G FI FD Sbjct: 275 RPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFD 334 Query: 298 DKRDAEDALRDLDG 339 + +A A+ L+G Sbjct: 335 KREEATRAIIALNG 348
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 32.7 bits (73), Expect = 2.2 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +1 Query: 136 RRRRDLFTMARLYVGNLDARVTAGELEDEFRVFG------VLRSVWVARKPPGFAFIDFD 297 R D A LYV L +T ELE F FG +L++ + G FI FD Sbjct: 239 RPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFD 298 Query: 298 DKRDAEDALRDLDG 339 + +A A+ L+G Sbjct: 299 KREEATRAIIALNG 312 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 126,065,689 Number of extensions: 2297107 Number of successful extensions: 6774 Number of sequences better than 10.0: 420 Number of HSP's gapped: 6665 Number of HSP's successfully gapped: 487 Length of query: 312 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 199 Effective length of database: 69,691,104 Effective search space: 13868529696 Effective search space used: 13868529696 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
