>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1344
Score = 279 bits (604), Expect(3) = 4e-95
Identities = 107/130 (82%), Positives = 120/130 (92%)
Frame = +1 / +3
Query: 193 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 372
QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYY
Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 647
Query: 373 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 552
DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPG
Sbjct: 648 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 827
Query: 553 CEESGKA*TS 582
CEESG * S
Sbjct: 828 CEESGGN*AS 857
Score = 65.7 bits (137), Expect(3) = 4e-95
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1 / +3
Query: 46 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNA 147
MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S +A
Sbjct: 207 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSA 308
Score = 43.2 bits (88), Expect(3) = 4e-95
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 142 NAAGLGSVSNGGRIRCMQV 198
N+AGLGSVSNGGRI CMQV
Sbjct: 300 NSAGLGSVSNGGRISCMQV 356
Score = 207 bits (447), Expect(2) = 5e-61
Identities = 90/128 (70%), Positives = 102/128 (79%)
Frame = -1 / -3
Query: 566 PDSSQPGGLKAMKLTHCT*RMLSNPMMRT*ASGYSFLTSSTSFNTCVASVHPNIGSFHIV 387
PDSSQPGGL AMKL +CT LS PMMRT ASGY+FL SS+S +T VASVHPNIGSFH+V
Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662
Query: 386 QYRPS*YPGEALCSRKMNPTLLNSRQGTHLERIR*STCFRSASVESGGK*DKVSNFLMPS 207
QY PS*YPG+ SR NPTLLNSRQGTHL+R R S CF+ +S SGG+ D+VSNFLMPS
Sbjct: 661 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSNFLMPS 482
Query: 206 IGQTCMHR 183
IG TC +
Sbjct: 481 IGHTCAEK 458
Score = 51.0 bits (105), Expect(2) = 5e-61
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -1 / -3
Query: 122 GRPAVDLSPWKGATAVAADDMTVGAIVDS 36
G PAVDLSPWKGAT VA + +TVGAI S
Sbjct: 283 GSPAVDLSPWKGATEVADEAITVGAIASS 197
Score = 141 bits (302), Expect(2) = 2e-34
Identities = 70/129 (54%), Positives = 88/129 (68%)
Frame = +3 / +2
Query: 192 AGLAD*RHQEVRDFVLLATALHGGTPEAGRLPDPLQVGALSRVQQGWIHLP*AQCLSRVL 371
AG+AD*RHQEV D V+ ATA G EA R+P P+Q+GAL RV G + LP* +S VL
Sbjct: 467 AGVAD*RHQEV*DPVVPATAHGRGPLEADRVPAPVQMGALPRV**GRVRLP*EPQVSWVL 646
Query: 372 RWPILDNVEATYVWVHRRHTGVKRSGGGQEGVP*RLCPHHRIRQHASGAVRQLHRLQATR 551
W +LD+VEA YV +H H G + + GGQEG+ +C HHR+RQ +GAV LHRLQA
Sbjct: 647 *WQVLDHVEAAYVRMH*CHPGAQGARGGQEGISRCICSHHRLRQRQAGAVD*LHRLQAPG 826
Query: 552 LRGVWQGLN 578
LRGV + L+
Sbjct: 827 LRGVRRKLS 853
Score = 28.6 bits (56), Expect(2) = 2e-34
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3 / +2
Query: 42 NDGSHCHVVGSHRRSTLPGTQVHSWSP 122
++G+H + H R +LPG Q+H +P
Sbjct: 203 SNGAHRDGLVGHLRCSLPGAQIHRRAP 283
Score = 121 bits (258), Expect(3) = 1e-32
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -3 / -2
Query: 426 GVGAPKHR*LPHCPVSAIVIPWRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGER 247
G+ A +HR LPH PV AI++P R +VLT DE +L +LE RHP G +QV+DLLQE L ER
Sbjct: 701 GISASEHRQLPHGPVPAIIVPRRPVVLTVDEPDLTKLEARHPFGPEQVLDLLQEVLDRER 522
Query: 246 WQVRQSLELLDAFNRPDL 193
WQVRQ L+LLDAFNRP L
Sbjct: 521 WQVRQGLKLLDAFNRPHL 468
Score = 31.3 bits (62), Expect(3) = 1e-32
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 565 QTPRSLVA*RR*S*RTAPDACCRIR*C 485
+TPR+ A RR*S* TAP CR R*C
Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR*C 760
Score = 30.9 bits (61), Expect(3) = 1e-32
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3 / -2
Query: 120 ETSCGLESLEGCYGGGCRRHDSGSH 46
E G E LEG GGG R H G H
Sbjct: 281 EPGGGFEPLEGSNGGGRRGHHGGRH 207
Score = 91.3 bits (193), Expect(3) = 3e-23
Identities = 44/79 (55%), Positives = 53/79 (67%)
Frame = -2 / -1
Query: 427 WRRCTQT*VASTLSSIGHRNTLERHCAHGR*IQPC*TRDKAPTWSGSGSRPASGVPPWRA 248
W +C +T* AST SS H +T E +HGR +P *TR KAP W+G+G+R AS P A
Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRRTRPY*TRGKAPIWTGAGTRSASRGPRP*A 523
Query: 247 VASKTKSRTS*CLQSARPA 191
VA T S+TS*CLQSA PA
Sbjct: 522 VAGTTGSQTS*CLQSATPA 466
Score = 30.4 bits (60), Expect(3) = 3e-23
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3 / -2
Query: 534 DEADALHLTHVVESDDAD 481
DEA+ LHL VVE+DDA+
Sbjct: 809 DEANQLHLPDVVEADDAN 756
Score = 29.9 bits (59), Expect(3) = 3e-23
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2 / -1
Query: 121 GDQLWT*VPGRVLRRWLPTT*QWEPSL 41
G + W * PGR RRW +W P L
Sbjct: 282 GARRWI*APGREQRRWPTRPSRWAPLL 202
Score = 56.5 bits (117), Expect(2) = 4e-11
Identities = 31/72 (43%), Positives = 32/72 (44%)
Frame = +2 / +1
Query: 302 GCLVXXXXXXXXXXXXTMPLQGITMADTGQCGSYLCLGAPTPHRC*TKWRRSRRSTLTPM 481
GCL T L G MA TG CGS LC A P RC RR RR +
Sbjct: 577 GCLASSLVRSGSSTVRTTGLLGTMMAGTGPCGSCLCSDALMPPRCSRSSRRPRRHIQMHL 756
Query: 482 SASSDSTTCVRC 517
ASS STT RC
Sbjct: 757 FASSASTTSGRC 792
Score = 31.3 bits (62), Expect(2) = 4e-11
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 194 RSGRLKASRSSRLCLTC 244
R GRLKASRS R C TC
Sbjct: 469 RCGRLKASRSLRPCRTC 519
>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1193
Score = 279 bits (604), Expect(4) = 4e-94
Identities = 105/126 (83%), Positives = 119/126 (94%)
Frame = +1 / +2
Query: 190 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 369
+QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGY
Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 523
Query: 370 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPP 549
YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPP
Sbjct: 524 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 703
Query: 550 GCEESG 567
GCEESG
Sbjct: 704 GCEESG 721
Score = 65.7 bits (137), Expect(4) = 4e-94
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1 / +2
Query: 46 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNA 147
MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S N+
Sbjct: 92 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNS 193
Score = 38.6 bits (78), Expect(4) = 4e-94
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 148 AGLGSVSNGGRIRCMQVWPI 207
+G G+VSNGGRI+CMQV+ I
Sbjct: 191 SGFGNVSNGGRIKCMQVYMI 250
Score = 25.8 bits (50), Expect(4) = 4e-94
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 711 *EYYNYVWVR 740
*EYYNY WVR
Sbjct: 931 *EYYNYRWVR 960
Score = 192 bits (413), Expect(2) = 2e-55
Identities = 87/134 (64%), Positives = 103/134 (76%)
Frame = -1 / -3
Query: 581 LV*ALPDSSQPGGLKAMKLTHCT*RMLSNPMMRT*ASGYSFLTSSTSFNTCVASVHPNIG 402
L * PDSSQPGGL AMKL +CT LS PM+RT ASG +FL SS+S +T VASV PN+G
Sbjct: 735 LA*LPPDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG*AFLASSSSLSTWVASVQPNMG 556
Query: 401 SFHIVQYRPS*YPGEALCSRKMNPTLLNSRQGTHLERIR*STCFRSASVESGGK*DKVSN 222
SFH+VQY PS*YPG+ SR NPTLLNSRQGTHL+R R S CF+ +S SGG+ D+VSN
Sbjct: 555 SFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSN 376
Query: 221 FLMPSIGQTCMHRI 180
FLMPSIG T ++ +
Sbjct: 375 FLMPSIGHT*INNV 334
Score = 47.3 bits (97), Expect(2) = 2e-55
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -1 / -3
Query: 122 GRPAVDLSPWKGATAVAADDMTVGAI 45
G PAVDLSPW GAT VA + +TVGAI
Sbjct: 168 GSPAVDLSPWNGATEVAEEAITVGAI 91
Score = 179 bits (385), Expect(3) = 7e-45
Identities = 77/131 (58%), Positives = 99/131 (75%)
Frame = +3 / +1
Query: 186 VHAGLAD*RHQEVRDFVLLATALHGGTPEAGRLPDPLQVGALSRVQQGWIHLP*AQCLSR 365
+++G+A+* HQEVRD ++ AT GG+ EA R+P +QVGAL RVQQGWI LP* +SR
Sbjct: 340 IYSGVAN*GHQEVRDPIVPATTHRGGSFEADRVPASIQVGALPRVQQGWIRLP*EPQVSR 519
Query: 366 VLRWPILDNVEATYVWVHRRHTGVKRSGGGQEGVP*RLCPHHRIRQHASGAVRQLHRLQA 545
VLRW +LD+VEA +V +HR H G + + GGQEG+P LCP+HR+RQ +GAV LHRLQA
Sbjct: 520 VLRWQVLDHVEAAHVRLHRCHPGAQGARGGQEGLPRCLCPYHRLRQRQAGAVD*LHRLQA 699
Query: 546 TRLRGVWQGLN 578
RLRGVW L+
Sbjct: 700 PRLRGVWWQLS 732
Score = 22.6 bits (43), Expect(3) = 7e-45
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3 / +1
Query: 48 GSHCHVVGSHRRSTLPGTQVHSWSP 122
G H + H R ++P QVH +P
Sbjct: 94 GPHRDGLLGHLRGSIPRAQVHRRAP 168
Score = 22.6 bits (43), Expect(3) = 7e-45
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 707 IIRVLQLRLGE 739
I+RVLQL LGE
Sbjct: 927 IVRVLQLSLGE 959
Score = 121 bits (259), Expect(3) = 2e-34
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = -3 / -2
Query: 426 GVGAPKHR*LPHCPVSAIVIPWRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGER 247
G+GA +H LPH P+ AIV+P R +VLT DESNLAELE RHPLG+ QV+DLLQ+ L GE
Sbjct: 580 GIGAAEHGQLPHGPIPAIVVPGRPVVLTVDESNLAELEARHPLGSKQVLDLLQKILHGEW 401
Query: 246 WQVRQSLELLDAFNRPDLH 190
WQVR LELLDA N P L+
Sbjct: 400 WQVR*GLELLDALNWPHLN 344
Score = 39.6 bits (80), Expect(3) = 2e-34
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -2 / -1
Query: 565 QTPRSLVA*RR*S*RTAPDACCRIR*CGHRRQG 467
QTPR+L A RR*S* TAP CR R* G R +G
Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621
Score = 28.1 bits (55), Expect(3) = 2e-34
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3 / -2
Query: 120 ETSCGLESLEGCYGGGCRRHDSGSH 46
E GLE LE +GGG H G H
Sbjct: 166 EPGGGLEPLEWSHGGGRGGHHGGGH 92
Score = 93.6 bits (198), Expect(3) = 6e-23
Identities = 44/78 (56%), Positives = 51/78 (65%)
Frame = -2 / -1
Query: 427 WRRCTQT*VASTLSSIGHRNTLERHCAHGR*IQPC*TRDKAPTWSGSGSRPASGVPPWRA 248
W RC++T AST S+ HR+T E +HGR IQPC*TR KAPTW +G+R AS PP
Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRRIQPC*TRGKAPTWIEAGTRSASKDPPR*V 402
Query: 247 VASKTKSRTS*CLQSARP 194
VA SRTS*C Q A P
Sbjct: 401 VAGTIGSRTS*CPQLATP 348
Score = 33.6 bits (67), Expect(3) = 6e-23
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 534 DEADALHLTHVVESDDADIGV 472
DEA+ LHL VVE+DD D G+
Sbjct: 688 DEANQLHLPDVVEADDTDKGI 626
Score = 23.1 bits (44), Expect(3) = 6e-23
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2 / -1
Query: 121 GDQLWT*VPGRVLRRWLPTT*QWEP 47
G + WT* G RRW +W P
Sbjct: 167 GARRWT*ALGMEPRRWPRRPSRWGP 93
Score = 66.1 bits (138), Expect(2) = 2e-12
Identities = 33/72 (45%), Positives = 34/72 (47%)
Frame = +2 / +3
Query: 302 GCLVXXXXXXXXXXXXTMPLQGITMADTGQCGSYLCLGAPTPHRC*TKWRRSRRSTLTPM 481
GCL T L G TMA G CGS C AP P RC RR RR T P+
Sbjct: 456 GCLASSSARLDSSTVRTTGLPGTTMAGIGPCGSCPCSAAPMPPRCSRSSRRPRRPTPMPL 635
Query: 482 SASSDSTTCVRC 517
S SS STT RC
Sbjct: 636 SVSSASTTSGRC 671
Score = 25.8 bits (50), Expect(2) = 2e-12
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 194 RSGRLKASRSSRLCLTC 244
R G+L+ASRSSR TC
Sbjct: 348 RCGQLRASRSSRPYRTC 398
>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1248
Score = 276 bits (598), Expect(3) = 3e-92
Identities = 104/124 (83%), Positives = 117/124 (94%)
Frame = +1 / +2
Query: 196 VWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYD 375
VWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYD
Sbjct: 515 VWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYD 694
Query: 376 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGC 555
GRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGC
Sbjct: 695 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 874
Query: 556 EESG 567
EESG
Sbjct: 875 EESG 886
Score = 66.6 bits (139), Expect(3) = 3e-92
Identities = 27/41 (65%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 28 SY*LSTMAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAA 150
++* + MAP+VM+S+AT VAPFQGLKSTAG+PV+R SGN++
Sbjct: 247 AW*AAEMAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSS 369
Score = 35.4 bits (71), Expect(3) = 3e-92
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 148 AGLGSVSNGGRIRCMQV 198
+ G+VSNGGRIRCMQV
Sbjct: 364 SSFGNVSNGGRIRCMQV 414
Score = 202 bits (435), Expect(2) = 9e-59
Identities = 89/124 (71%), Positives = 100/124 (80%)
Frame = -1 / -1
Query: 566 PDSSQPGGLKAMKLTHCT*RMLSNPMMRT*ASGYSFLTSSTSFNTCVASVHPNIGSFHIV 387
PDSSQPGGL AMKL CT LS PM+RT ASGY+FL SS+S +T VASVHPN+GSFH+V
Sbjct: 885 PDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMV 706
Query: 386 QYRPS*YPGEALCSRKMNPTLLNSRQGTHLERIR*STCFRSASVESGGK*DKVSNFLMPS 207
QY PS*YPG+ SR NPTLLNSRQGTHLER R S CFR +S SGG+*++VSNFLMPS
Sbjct: 705 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLERSRYSICFRRSSTVSGGR*ERVSNFLMPS 526
Query: 206 IGQT 195
IG T
Sbjct: 525 IGHT 514
Score = 48.7 bits (100), Expect(2) = 9e-59
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1 / -2
Query: 122 GRPAVDLSPWKGATAVAADDMTVGAI 45
G PAVDLSPWKGAT VA D +T GAI
Sbjct: 341 GMPAVDLSPWKGATVVADDAITEGAI 264
Score = 180 bits (388), Expect(2) = 5e-46
Identities = 80/132 (60%), Positives = 97/132 (73%)
Frame = +3 / +1
Query: 186 VHAGLAD*RHQEVRDFVLLATALHGGTPEAGRLPDPLQVGALSRVQQGWIHLP*AQCLSR 365
V+ G+AD* HQEVRD +L ATA GG PEA R+P P QVGAL RVQQG I LP* + R
Sbjct: 505 VYLGVAD*GHQEVRDPLLPATAHRGGPPEADRVPAPFQVGALPRVQQGRIRLP*EPQIPR 684
Query: 366 VLRWPILDNVEATYVWVHRRHTGVKRSGGGQEGVP*RLCPHHRIRQHASGAVRQLHRLQA 545
+LRW +LD+VEA +V VH RH G + + GGQEGVP* + P+HR+RQ +GA QLHRLQA
Sbjct: 685 ILRWQVLDHVEAAHVRVH*RHPGAQGARGGQEGVP*CIRPYHRLRQRQAGAAHQLHRLQA 864
Query: 546 TRLRGVWQGLNK 581
LRGVW L++
Sbjct: 865 PGLRGVWWQLSR 900
Score = 27.6 bits (54), Expect(2) = 5e-46
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 30 LLAINDGSHCHVVGSHRRSTLPGTQVH 110
L++ DG V H R +LPG QVH
Sbjct: 249 LVSCRDGPLRDGVVGHHRRSLPGAQVH 329
Score = 121 bits (259), Expect(3) = 6e-35
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = -3 / -3
Query: 426 GVGAPKHR*LPHCPVSAIVIPWRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGER 247
GV AP+H LPH PV AIV+ +VLT DES+LAELE HPLG +QV+DLLQE L GER
Sbjct: 745 GVSAPEHGQLPHGPVPAIVVSGGSVVLTVDESDLAELEAGHPLGTEQVLDLLQEVLHGER 566
Query: 246 WQVRQSLELLDAFNRPDLH 190
WQV + LELLDA NRP L+
Sbjct: 565 WQVGEGLELLDALNRPHLN 509
Score = 35.4 bits (71), Expect(3) = 6e-35
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 108 GLESLEGCYGGGCRRHDSGSH 46
GLE LEG GGG RRH G H
Sbjct: 327 GLEPLEGSDGGGRRRHHGGGH 265
Score = 34.1 bits (68), Expect(3) = 6e-35
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 534 DEADALHLTHVVESDDADIGVR 469
DEAD LHL VVE+DD D +R
Sbjct: 853 DEADELHLPDVVEADDTDECIR 788
Score = 101 bits (216), Expect(3) = 4e-26
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 427 WRRCTQT*VASTLSSIGHRNTLERHCAHGR*IQPC*TRDKAPTWSGSGSRPASGVPPWRA 248
WR+CT+T AST SS HR+ +HGR I+PC*TR +APTW+G+G+R ASG PP A
Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRRIRPC*TRGRAPTWNGAGTRSASGGPPR*A 567
Query: 247 VASKTKSRTS*CLQSARP 194
VA + SRTS*C QSA P
Sbjct: 566 VAGRRGSRTS*CPQSATP 513
Score = 33.1 bits (66), Expect(3) = 4e-26
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = -2 / -2
Query: 565 QTPRSLVA*RR*S*RTAPDACCRIR*CGHRRQG 467
QTPRS A RR*S* AP CR R* G QG
Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQG 786
Score = 26.3 bits (51), Expect(3) = 4e-26
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2 / -3
Query: 109 WT*VPGRVLRRWLPTT*QWEPSL 41
WT* PGR R W T + PSL
Sbjct: 328 WT*APGRERRWWPTTPSRRGPSL 260
Score = 59.7 bits (124), Expect(2) = 4e-10
Identities = 29/49 (59%), Positives = 29/49 (59%)
Frame = +2 / +3
Query: 371 TMADTGQCGSYLCLGAPTPHRC*TKWRRSRRSTLTPMSASSDSTTCVRC 517
TMA TG CGS C GA TP RC RR RR TL S SS STT RC
Sbjct: 690 TMAGTGPCGSCPCSGALTPPRCSRSSRRPRRRTLMHSSVSSASTTSGRC 836
Score = 27.6 bits (54), Expect(2) = 4e-10
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 194 RSGRLKASRSSRLCLTC 244
R GRL+ASRSSR TC
Sbjct: 513 RCGRLRASRSSRPSPTC 563
>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 2281
Score = 279 bits (603), Expect(3) = 1e-91
Identities = 105/125 (84%), Positives = 118/125 (94%)
Frame = +1 / +3
Query: 193 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 372
QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYY
Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 632
Query: 373 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 552
DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPG
Sbjct: 633 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 812
Query: 553 CEESG 567
CEESG
Sbjct: 813 CEESG 827
Score = 61.6 bits (128), Expect(3) = 1e-91
Identities = 25/35 (71%), Positives = 33/35 (94%)
Frame = +1 / +2
Query: 46 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAA 150
MAP+VM+S+AT+VAPFQGLKSTAGLPV+R S +++
Sbjct: 206 MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSS 310
Score = 36.3 bits (73), Expect(3) = 1e-91
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 142 NAAGLGSVSNGGRIRCMQV 198
+++ G+VSNGGRIRCMQV
Sbjct: 299 SSSSFGNVSNGGRIRCMQV 355
Score = 199 bits (428), Expect(2) = 1e-57
Identities = 86/129 (66%), Positives = 102/129 (79%)
Frame = -1 / -1
Query: 566 PDSSQPGGLKAMKLTHCT*RMLSNPMMRT*ASGYSFLTSSTSFNTCVASVHPNIGSFHIV 387
PDSSQPGGL AMKL +CT LS PMMRT ASGY+F SS+S +T VASVHPN+GSFH+V
Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647
Query: 386 QYRPS*YPGEALCSRKMNPTLLNSRQGTHLERIR*STCFRSASVESGGK*DKVSNFLMPS 207
QY PS*YPG+ SR NPTLLNS+QGTHL+R R S CF+ +S +GGK D+VSNFLMPS
Sbjct: 646 QYLPS*YPGDL*FSR*TNPTLLNSKQGTHLDRSRYSICFKRSSTVNGGKYDRVSNFLMPS 467
Query: 206 IGQTCMHRI 180
IG T ++ +
Sbjct: 466 IGHT*LNEL 440
Score = 49.2 bits (101), Expect(2) = 1e-57
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / -2
Query: 122 GRPAVDLSPWKGATAVAADDMTVGAI 45
GRPAVDLSPWKGAT VA + +T GAI
Sbjct: 282 GRPAVDLSPWKGATEVADEAITEGAI 205
Score = 137 bits (294), Expect(2) = 3e-32
Identities = 67/135 (49%), Positives = 89/135 (65%)
Frame = +3 / +2
Query: 186 VHAGLAD*RHQEVRDFVLLATALHGGTPEAGRLPDPLQVGALSRVQQGWIHLP*AQCLSR 365
+ +G+AD* H EVRD V+LA GG EA R+P P+ VGAL VQQG I LP* ++R
Sbjct: 446 IQSGVAD*GH*EVRDSVVLAAIDSGGPFEADRVPAPI*VGALLGVQQGRIRLP*ESQITR 625
Query: 366 VLRWPILDNVEATYVWVHRRHTGVKRSGGGQEGVP*RLCPHHRIRQHASGAVRQLHRLQA 545
+L +LD+VE +VW+HR H + + GG+EG+P* L HH + Q +GAV QLHR+ A
Sbjct: 626 IL*R*VLDHVETAHVWMHRCHPSAQGARGGKEGIP*CLRSHHWL*QR*AGAVNQLHRV*A 805
Query: 546 TRLRGVWQGLNKLTP 590
T LRGV + L+ P
Sbjct: 806 TGLRGVRRQLSAFVP 850
Score = 25.4 bits (49), Expect(2) = 3e-32
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3 / +1
Query: 75 HRRSTLPGTQVHSWSP 122
H R +LPG QVH P
Sbjct: 235 HLRGSLPGAQVHCGPP 282
Score = 100 bits (214), Expect(3) = 7e-29
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = -3 / -3
Query: 426 GVGAPKHR*LPHCPVSAIVIPWRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGER 247
G+GA KH PH PV +++ ++LT DES+LAEL+ RHPL ++QV+DLLQ+ L +
Sbjct: 686 GIGASKHGQFPHGPVPTVIVSG*SVILTVDESDLAELQARHPLRSEQVLDLLQKVLHCQW 507
Query: 246 WQVRQSLELLDAFNRPDL 193
QVRQSLELL+A NRP L
Sbjct: 506 RQVRQSLELLNALNRPHL 453
Score = 37.7 bits (76), Expect(3) = 7e-29
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 120 ETSCGLESLEGCYGGGCRRHDSGSH 46
E GLE LEG +GGG R H GSH
Sbjct: 280 EARSGLEPLEGSHGGGRRSHHRGSH 206
Score = 33.6 bits (67), Expect(3) = 7e-29
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 562 TPRSLVA*RR*S*RTAPDACCRIR*CGHRRQG 467
TPR+ VA R*S* TAP C+ +*C R QG
Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727
Score = 68.9 bits (144), Expect(4) = 1e-17
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -2 / -2
Query: 349 AHGR*IQPC*TRDKAPTWSGSGSRPASGVPPWRAVASKTKSRTS*CLQSARP 194
+HGR I+PC*T KAPT G+G+R AS PP AS T+SRTS*C QSA P
Sbjct: 609 SHGRRIRPC*TPSKAPT*IGAGTRSASKGPPLSMAASTTESRTS*CPQSATP 454
Score = 33.1 bits (66), Expect(4) = 1e-17
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = -3 / -3
Query: 534 DEADALHLTHVVESDDADIGVR 469
DEAD LHL +VV+++DA+ G+R
Sbjct: 794 DEAD*LHLPNVVKANDANEGIR 729
Score = 27.2 bits (53), Expect(4) = 1e-17
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 121 GDQLWT*VPGRVLRRW 74
G WT* PGR RRW
Sbjct: 281 GGPQWT*APGREPRRW 234
Score = 23.5 bits (45), Expect(4) = 1e-17
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2 / -2
Query: 427 WRRCTQT*VASTLSS 383
W RC QT ST SS
Sbjct: 687 WHRCIQTWAVSTWSS 643
Score = 50.6 bits (104), Expect(2) = 9e-09
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +2 / +1
Query: 383 TGQCGSYLCLGAPTPHRC*TKWRRSRRSTLTPMSASSDSTTCVRC 517
TG CG+ CL AP P +C RR RR TL P AS TT RC
Sbjct: 643 TGPCGNCPCLDAPMPPKCSRSSRRQRRHTLMPSFASLALTTLGRC 777
Score = 33.1 bits (66), Expect(2) = 9e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 194 RSGRLKASRSSRLCLTC 244
R GRL+A RSSRLC TC
Sbjct: 454 RCGRLRALRSSRLCRTC 504
>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast|
precursor, putative, expressed
Length = 1519
Score = 134 bits (288), Expect(3) = 1e-42
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +1 / +3
Query: 331 GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMR 510
G I R ++ PGYYDGRYWT+WKLPMFGC+DA VL EVEE ++EYPDA++R+I FD+ R
Sbjct: 750 GEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSR 929
Query: 511 QVQCVSFIAFKPPGCEES 564
Q QC+SF+ KPP S
Sbjct: 930 QCQCMSFVVHKPPSAAAS 983
Score = 59.3 bits (123), Expect(3) = 1e-42
Identities = 18/38 (47%), Positives = 31/38 (81%)
Frame = +1 / +2
Query: 217 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV 330
+++E +SYLPPLS +++ K++++++ WVPCLEF KV
Sbjct: 491 RRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKV 604
Score = 23.5 bits (45), Expect(3) = 1e-42
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1 / +1
Query: 157 GSVSNGGRIRCMQV 198
G+ SNG R CMQV
Sbjct: 271 GAASNGFRTYCMQV 312
Score = 85.8 bits (181), Expect(2) = 2e-17
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = -1 / -1
Query: 563 DSSQPGGLKAMKLTHCT*RMLSNPMMRT*ASGYSFLTSSTSFNTCVASVHPNIGSFHIVQ 384
+++ GGL K H R+LS M R ASGYS SSTS +T AS HPNIGSFH VQ
Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803
Query: 383 YRPS*YPGEALCSRKMNPT 327
Y PS*YPG L R ++P+
Sbjct: 802 YLPS*YPGIRLLLRWISPS 746
Score = 26.7 bits (52), Expect(2) = 2e-17
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3 / -1
Query: 327 LAELETRHPLGADQVVDLLQECLRGERWQVRQSL 226
L +LE R P +DLL + LR + QVR L
Sbjct: 601 LVKLEARDPSFGHDELDLLGDGLRAQGRQVRHRL 500
Score = 54.2 bits (112), Expect(2) = 5e-08
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2 / +1
Query: 350 TMPLQGITMADTGQCGSYLCLGAPTPHRC*TKWRRSRRSTLTPMSASSDST 502
T +G T TG+CGS C A T RC +WR + ST TP SASS ST
Sbjct: 769 TAGCRGTTTGGTGRCGSCRCSDALTRRRCSGRWRNAGGSTRTPSSASSPST 921
Score = 26.3 bits (51), Expect(2) = 5e-08
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2 / +3
Query: 191 CRSGRLKASRSSRLCLTC 244
CR G L + +R CLTC
Sbjct: 465 CRHGTLSPTGGTRRCLTC 518
Score = 49.6 bits (102), Expect = 3e-05
Identities = 29/60 (48%), Positives = 32/60 (53%)
Frame = +3 / +2
Query: 366 VLRWPILDNVEATYVWVHRRHTGVKRSGGGQEGVP*RLCPHHRIRQHASGAVRQLHRLQA 545
VLR +LD VEA V + R G GG EGVP RL P HR+RQ V L R QA
Sbjct: 785 VLRREVLDAVEAADVRML*RGGGAPGGGGMPEGVPGRLHPPHRLRQQPPVPVHVLRRPQA 964
>LOC_Os07g06970:12007.t00576:unspliced-genomic HEN1, putative, expressed|
Length = 5305
Score = 28.1 bits (55), Expect(2) = 0.16
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3 / +3
Query: 417 HRRHTGVKRSGGGQEGVP*RLCPHHRIRQHASGAVR 524
HRRH G R G+ CP I +H G ++
Sbjct: 423 HRRHPGHLRQEEGRRASRRADCPRQGIDEHCGGGMQ 530
Score = 26.3 bits (51), Expect(2) = 0.16
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 634 PFYFCSACVCVLSLQLELTLY 696
PF+FC CV S + + +Y
Sbjct: 536 PFFFCFTCVVAKSSSIYIEIY 598
>LOC_Os06g40890:12006.t03784:unspliced-genomic exopolygalacturonase precursor, putative, expressed|
Length = 2054
Score = 28.6 bits (56), Expect(2) = 2.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3 / +1
Query: 426 HTGVKRSGGGQEGVP*RLCPHHRIRQ 503
H+G R GGG G P R HH+ R+
Sbjct: 154 HSGRLRGGGGGGGRPRRHVRHHQARR 231
Score = 25.8 bits (50), Expect(2) = 2.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3 / +2
Query: 486 HHRIRQHASGAVRQLHRLQATRLR 557
HHR+ QHA G L R A + R
Sbjct: 1679 HHRVVQHAGGRPAALLRQAAVQRR 1750
>LOC_Os08g44870:12008.t04260:unspliced-genomic transparent testa 12 protein, putative, expressed|
Length = 2051
Score = 33.1 bits (66), Expect = 2.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 298 WSGSGSRPASGVPPWRAVAS 239
W+G G RP G PPW A+
Sbjct: 814 WTGGGRRPGRGTPPWTTRAT 755
Score = 30.4 bits (60), Expect(2) = 5.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 240 LATALHGGTPEAGRLPDPL 296
+A +HGG P GRLP P+
Sbjct: 756 VARVVHGGVPRPGRLPPPV 812
Score = 22.6 bits (43), Expect(2) = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 486 HHRIRQHASGAVR 524
HH +Q A+GAVR
Sbjct: 1182 HHGAQQRAAGAVR 1220
>LOC_Os02g44654:12002.t05516:unspliced-genomic cytochrome P450 86A2, putative, expressed|
Length = 2197
Score = 26.7 bits (52), Expect(2) = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 267 ECLRGERWQVRQSLELLDAFNR 202
ECLR R +V Q++ELL+ R
Sbjct: 1262 ECLRERRLEVDQTVELLEGEGR 1197
Score = 22.6 bits (43), Expect(2) = 4.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2 / -2
Query: 331 QPC*TRDKAPTWSGSGSRPASGVPP 257
+P +R + WS G R SGV P
Sbjct: 1326 RPGGSRRRRRAWSPLGRRGTSGVSP 1252
>LOC_Os06g17570:12006.t01629:unspliced-genomic embryogenesis transmembrane protein, putative, expressed|
Length = 1395
Score = 28.6 bits (56), Expect(2) = 5.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2 / +3
Query: 814 YFFFFFHWNSYHVYFSLCI 758
+FFFF H H Y ++C+
Sbjct: 909 FFFFFLHGKRAHAYSAICM 965
Score = 24.0 bits (46), Expect(2) = 5.0
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -2 / +3
Query: 316 RDKAPTWSGSGSRPASGVPPWRAVASKTKSR 224
R + W+G RP + W A +K K R
Sbjct: 1287 RCRGAWWTGRRGRPRTTCT*WTASTTKRKRR 1379
>LOC_Os01g54370:12001.t04854:unspliced-genomic dihydroorotase, mitochondrial precursor, putative, expressed|
Length = 3583
Score = 29.5 bits (58), Expect(2) = 6.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1 / -2
Query: 485 RT*ASGYSFLTSSTSFNTCVASVHPNI 405
RT + Y FL S N+CVA+ HP I
Sbjct: 1806 RTIGTYYEFLFSVLVSNSCVAASHPEI 1726
Score = 24.0 bits (46), Expect(2) = 6.4
Identities = 11/40 (27%), Positives = 15/40 (37%)
Frame = -3 / -1
Query: 363 WRGIVLTEDESNLAELETRHPLGADQVVDLLQECLRGERW 244
W IV + ++ R D + L C RG RW
Sbjct: 760 WASIVREVERHERHKVAPRRQRPEDLLPVLQSSCCRGHRW 641
>LOC_Os06g49650:12006.t04649:unspliced-genomic harpin-induced protein, putative, expressed|
Length = 1008
Score = 25.4 bits (49), Expect(2) = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 295 SGSGSRPASGVPPWR 251
+GSG R ++G P WR
Sbjct: 219 AGSGRRRSTGAPAWR 263
Score = 23.5 bits (45), Expect(2) = 6.5
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2 / +3
Query: 256 WRAVASKTKSRTS*CLQSARPAC 188
WR+ S R S C S P C
Sbjct: 291 WRSA*SSPARRCSPCTSSTSPGC 359
>LOC_Os08g39380:12008.t03670:unspliced-genomic beta-2-xylosyltransferase, putative, expressed|
Length = 4151
Score = 26.3 bits (51), Expect(2) = 7.8
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2 / +2
Query: 605 MVSCQVHFISLFTFVLLVYVFSPCNSS*HCMS 700
+V C + F T + + Y++ CN+ +C S
Sbjct: 908 IVVCWIRFT*TLTCLNISYIYEDCNNDLNCRS 1003
Score = 22.1 bits (42), Expect(2) = 7.8
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3 / +3
Query: 453 GQEGVP*RLCPHHRIRQHASGAVRQLHRLQATRLRGVWQGLNKL 584
G GVP RL H R R +L +A R + G + L
Sbjct: 720 GGSGVPRRLRAHRRDRDAHDEVAARLGARRAARRATLLAGTHTL 851
>LOC_Os12g08590:12012.t00741:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 2753
Score = 24.9 bits (48), Expect(2) = 8.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2 / -2
Query: 356 PLQGITMADTGQCGSYLCLGAPTPHRC*TKWRRSRR 463
P ++++D Q G AP H C ++WR R
Sbjct: 2275 PPSTVSLSDQRQEGRASHTRAPDKHPCGSRWRSPPR 2168
Score = 23.5 bits (45), Expect(2) = 8.0
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +3 / -1
Query: 516 AVRQLHRLQATRLRGVWQGLNKLTPFYHTTWFR 614
A L R T + + G+ LTP +W+R
Sbjct: 2132 AFASLDRDDITEVSSGYSGMVDLTPHMRASWWR 2034
>LOC_Os09g33559:12009.t003563:unspliced-genomic rhodopsin-like receptor, putative, expressed|
Length = 2587
Score = 28.6 bits (56), Expect(2) = 8.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 760 CIKRNIHDKNSSEKKKKN 813
CI RN KN SEK +KN
Sbjct: 438 CIHRNKQPKNRSEKSRKN 385
Score = 24.0 bits (46), Expect(2) = 8.6
Identities = 5/17 (29%), Positives = 11/17 (64%)
Frame = +3 / -3
Query: 405 YVWVHRRHTGVKRSGGG 455
Y+W+ +TG+ ++ G
Sbjct: 2180 YIWLKENYTGISKTNSG 2130
>LOC_Os12g14640:12012.t01325:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 5502
Score = 29.9 bits (59), Expect(2) = 9.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 576 NKLTPFYHTTWFRAR 620
+K PF+HT+WF AR
Sbjct: 1346 SKCLPFFHTSWFAAR 1302
Score = 23.5 bits (45), Expect(2) = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 483 PHHRIRQHASGA 518
P HR +QH SG+
Sbjct: 5002 PRHRYKQHCSGS 4967
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 325,737,291
Number of extensions: 5180590
Number of successful extensions: 27872
Number of sequences better than 10.0: 83
Length of query: 271
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 222
Effective length of database: 52,856,264
Effective search space: 11734090608
Effective search space used: 11734090608
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)