ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3m06 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g48260:12003.t04183:unspliced-genomic expressed protein| Length = 5287 Score = 51.0 bits (105), Expect(7) = 3e-28 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = +3 / +2 Query: 711 RGRRVWEPFCYYRTNLACYYV 773 RG +WEPFCYYRTNLA YYV Sbjct: 5093 RGHNMWEPFCYYRTNLALYYV 5155 Score = 43.7 bits (89), Expect(7) = 3e-28 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +1 / +2 Query: 244 EAPVNPDEEYPSVEAEQEKFDVEEQDAEPKEQQ 342 EAPVNP EE+ + E EQEKF+ + ++ E Q Sbjct: 4592 EAPVNPSEEFSAAEVEQEKFEADVEEQERNADQ 4690 Score = 40.0 bits (81), Expect(7) = 3e-28 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +1 / +1 Query: 160 KDEKEDSHATEIYDDHQSNSADVPNL 237 +DEKE S ATEIY+D+Q N AD N+ Sbjct: 4435 QDEKEASEATEIYNDNQPNVADAQNV 4512 Score = 39.6 bits (80), Expect(7) = 3e-28 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = +1 / +2 Query: 1 AAVRAKLDRIMASDYYT 51 AAVRAKLD+IMASDYYT Sbjct: 1019 AAVRAKLDKIMASDYYT 1069 Score = 29.9 bits (59), Expect(7) = 3e-28 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 / +1 Query: 96 GEYGCLTRGISSGGEP 143 GE+GC+TRG G EP Sbjct: 1126 GEHGCVTRGAGCGREP 1173 Score = 25.8 bits (50), Expect(7) = 3e-28 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +3 / +1 Query: 585 PAEELQQQGQGW 620 PAE +QQQ QGW Sbjct: 4912 PAEGVQQQRQGW 4947 Score = 23.1 bits (44), Expect(7) = 3e-28 Identities = 5/9 (55%), Positives = 7/9 (77%) Frame = +3 / +1 Query: 429 WRQPWIPGW 455 WR+ W+P W Sbjct: 4834 WRRRWLPEW 4860 Score = 39.1 bits (79), Expect(5) = 6e-09 Identities = 16/23 (69%), Positives = 17/23 (73%) Frame = -1 / -3 Query: 777 CRHNNRLS*FYNNKMAPRLFSLS 709 C HN LS*FYNNKMAP + LS Sbjct: 5159 C*HNKGLS*FYNNKMAPTYYVLS 5091 Score = 29.9 bits (59), Expect(5) = 6e-09 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -1 / -2 Query: 234 VWNVG*IRLMIIINFCSMGVFLLIL 160 + ++ IRL+I+++FCS+ LLIL Sbjct: 4509 ILSISYIRLIIVVDFCSLRSLLLIL 4435 Score = 26.3 bits (51), Expect(5) = 6e-09 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -2 / -2 Query: 908 RKGKGTNKHDLKLLWTKIPH 849 R G N++DLKLL IPH Sbjct: 5280 RNGIKENEYDLKLLPQSIPH 5221 Score = 26.3 bits (51), Expect(5) = 6e-09 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = -2 / -2 Query: 50 V**SDAMILSSLALTA 3 V**S+AMILS+ ALTA Sbjct: 1068 V**SEAMILSNFALTA 1021 Score = 24.9 bits (48), Expect(5) = 6e-09 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -3 / -3 Query: 514 HHRPDIHHLHPGIHAHSGTRH 452 HH H H HSGTRH Sbjct: 4868 HHGHSGSHRRRHHHDHSGTRH 4806 Score = 32.7 bits (65), Expect(5) = 1e-07 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = +1 / +3 Query: 733 HFVIIELT*PVIMSAIHP 786 HFVIIELT*P IMS P Sbjct: 5115 HFVIIELT*PFIMSTFAP 5168 Score = 30.9 bits (61), Expect(5) = 1e-07 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +2 / +3 Query: 5 R*GLSWTGSWHQTTTQQ 55 R G SWT SW QTTTQ+ Sbjct: 1023 RLGRSWTRSWLQTTTQR 1073 Score = 29.0 bits (57), Expect(5) = 1e-07 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 / +3 Query: 95 RRVWLPHQRHQQWRR 139 RR WL HQR + W+R Sbjct: 1125 RRAWLCHQRRRLWKR 1169 Score = 26.3 bits (51), Expect(5) = 1e-07 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +2 Query: 146 LLKATRMRRKTPMLQKFMMIISLIQPTFQTWIVKL 250 +L RMRR+ LQK IISL+ + W + + Sbjct: 4421 ILFVDRMRRRLRRLQKSTTIISLM*LMLRMWYLPM 4525 Score = 23.1 bits (44), Expect(5) = 1e-07 Identities = 6/7 (85%), Positives = 7/7 (100%) Frame = +3 / +1 Query: 453 WRVPEWA 473 WRVPEW+ Sbjct: 4807 WRVPEWS 4827 Score = 35.9 bits (72), Expect(3) = 0.007 Identities = 15/16 (93%), Positives = 15/16 (93%) Frame = -2 / -1 Query: 773 DIITG*VSSIITKWLP 726 DII G*VSSIITKWLP Sbjct: 5155 DIIKG*VSSIITKWLP 5108 Score = 26.3 bits (51), Expect(3) = 0.007 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 / -1 Query: 238 PGLERRLN*TDDHHKFL*HGSLPSHPCGLQQL 143 P E +L+* D +FL* PSHP Q + Sbjct: 4513 PHSEHQLH*ADYRCRFL*PPKPPSHPVNKQNI 4418 Score = 24.0 bits (46), Expect(3) = 0.007 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -3 / -3 Query: 430 HANPGHWGRHPSCHDHHH 377 H + GH G H H H H Sbjct: 4874 HPHHGHSGSHRRRHHHDH 4821 Score = 33.6 bits (67), Expect(2) = 0.070 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -3 / -2 Query: 772 T**QAKLVL**QNGSQTLLPLM 707 T**+AKLVL**QNGS L PL+ Sbjct: 5154 T**RAKLVL**QNGSHILCPLL 5089 Score = 22.6 bits (43), Expect(2) = 0.070 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = -2 / -1 Query: 860 KIPHLSTNHMQSLDWSNK 807 K LSTNH WS+K Sbjct: 5233 KYSALSTNHPYESHWSDK 5180 Score = 22.6 bits (43), Expect(3) = 1.5 Identities = 6/9 (66%), Positives = 7/9 (77%) Frame = -3 / -3 Query: 403 HPSCHDHHH 377 +PSCH H H Sbjct: 4760 NPSCHHHDH 4734 Score = 22.1 bits (42), Expect(3) = 1.5 Identities = 7/13 (53%), Positives = 7/13 (53%) Frame = -3 / -3 Query: 511 HRPDIHHLHPGIH 473 H P HH H G H Sbjct: 4883 HHPHPHHGHSGSH 4845 Score = 22.1 bits (42), Expect(3) = 1.5 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -2 / -2 Query: 269 SSSGFTGASRS 237 SS GFTGAS S Sbjct: 4617 SSEGFTGASSS 4585
>LOC_Os06g35220:12006.t03219:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5592 Score = 37.7 bits (76), Expect = 0.15 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 / +1 Query: 884 VCWFPCLFFFCMCECFYWFECVVATNTLR 970 +CWF C F C+C WF VV +R Sbjct: 826 LCWFTCFKFGCVCGSCMWFTSVVGCKCMR 912
>LOC_Os03g49610:12003.t04310:unspliced-genomic beta-glucosidase homolog precursor, putative, expressed| Length = 5293 Score = 36.8 bits (74), Expect = 0.28 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 / +1 Query: 857 SSSKVASGHVCWFPCLFFFCMCECFY 934 S + S CWFPC+FF CFY Sbjct: 4897 SQVAIGSCFPCWFPCIFFSLPSSCFY 4974
>LOC_Os03g40110:12003.t03445:unspliced-genomic nop14-like family protein, expressed| Length = 6880 Score = 36.8 bits (74), Expect = 0.28 Identities = 17/46 (36%), Positives = 18/46 (39%) Frame = -3 / -3 Query: 517 LHHRPDIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSCHDHH 380 LH P HH HP H H H I CL H +P H H Sbjct: 4217 LHLHPQHHHHHPQHHHHRHHHHHQILHCLTLQHLHQSFYPLFHKFH 4080 Score = 31.8 bits (63), Expect = 9.3 Identities = 13/43 (30%), Positives = 17/43 (39%) Frame = -3 / -3 Query: 505 PDIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSCHDHHH 377 P H P + H ++ LH +P H HP H H H Sbjct: 4289 PHHRHFAPSL*QTYYQSHYHLNPLLHLHPQHHHHHPQHHHHRH 4161
>LOC_Os03g44890:12003.t03873:unspliced-genomic anthranilate phosphoribosyltransferase-like protein, putative,| expressed Length = 3542 Score = 36.3 bits (73), Expect = 0.39 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = +1 / +1 Query: 124 SAVEENLAAEGHKDEKEDSHATEIYDDHQSNSADVPNLDREAPVNPDEEYPSVEAEQEK 300 +A E+ AAEG K+EKE + A + + P +++A EE S EA++++ Sbjct: 679 AAAEKKEAAEGGKEEKEKAPAAAAASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKE 855
>LOC_Os01g66190:12001.t05980:unspliced-genomic expressed protein| Length = 2814 Score = 30.9 bits (61), Expect(2) = 0.72 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 / +1 Query: 490 LHPGIHAHSGTRHPGIHGCLHANPGHWGRHP 398 LHP IHA G ++ + H PG + RHP Sbjct: 1447 LHPDIHASWGHKYLHLSIVWHHFPGTYRRHP 1539 Score = 26.7 bits (52), Expect(2) = 0.72 Identities = 12/39 (30%), Positives = 18/39 (46%) Frame = -2 / +3 Query: 986 CFQFALLTCLLPQHIRTSKNTHTYRKRKGKGTNKHDLKL 870 C L +CLL QH+ + H KR ++ H +L Sbjct: 1356 CSSCRLFSCLLGQHLLRMRTIHMEGKRLLNTSSGHPCQL 1472
>LOC_Os11g20179:12011.t004368:unspliced-genomic expressed protein| Length = 2387 Score = 35.4 bits (71), Expect = 0.73 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 / +1 Query: 905 FFFCMCECFYWFECVV 952 FFFC C F+WF+C V Sbjct: 2284 FFFCHCTFFFWFKCTV 2331
>LOC_Os02g10800:12002.t00928:unspliced-genomic protein brittle-1, chloroplast precursor, putative, expressed| Length = 2250 Score = 31.8 bits (63), Expect(2) = 1.1 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = -2 / -2 Query: 989 FCFQFALLTCLLPQHIRTSKNTHTYRKRKGKGTNKH 882 FCF F +C+LP + + H R+R+ + T+++ Sbjct: 2000 FCFFFFFFSCMLPSSHPCTISHHLLRRRRAQTTSRN 1893 Score = 24.9 bits (48), Expect(2) = 1.1 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = -3 / -1 Query: 826 HWIGATKPTHRWGADGLQ 773 H GA H GADGLQ Sbjct: 669 HGAGAAAADHEVGADGLQ 616
>LOC_Os05g08990:12005.t00776:unspliced-genomic glutaminyl-tRNA synthetase, putative, expressed| Length = 5153 Score = 34.1 bits (68), Expect(2) = 1.2 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = +2 / +3 Query: 827 TAYGWSINVESSSKVASGHVCWFPCLFFFCMCECF 931 T Y W IN S S H C C+FF C CF Sbjct: 963 TYYSWLINQ*SFKCPFSAHCCLRACVFFPCRGGCF 1067 Score = 23.5 bits (45), Expect(2) = 1.2 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +2 / +3 Query: 116 QRHQQWRRT*LLKATRMRRKTP 181 +R + WRR+ T RR+TP Sbjct: 180 RRRRSWRRSWRSGLTSARRRTP 245
>LOC_Os06g42710:12006.t03962:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 3542 Score = 34.5 bits (69), Expect = 1.4 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -3 / -3 Query: 493 HLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSCHDHHH 377 HLHP +H H +H H H H H H HHH Sbjct: 3435 HLHPHLHLHLHLQHHLHHHHQHHLHLHLHLHLHHHHHHH 3319 Score = 31.8 bits (63), Expect = 9.3 Identities = 15/46 (32%), Positives = 18/46 (39%) Frame = -3 / -3 Query: 514 HHRPDIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSCHDHHH 377 H +H H H H H +H LH + H H H HHH Sbjct: 3423 HLHLHLHLQHHLHHHHQHHLHLHLHLHLHHHHHHHHHHHHHHHHHH 3286
>LOC_Os04g26880:12004.t02394:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7149 Score = 34.5 bits (69), Expect = 1.4 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -3 / -3 Query: 517 LHHRPDIHHLHPGIHAHSGTRHPGIHGCLHANP 419 +H++ +HP HA S + HP IH +H+ P Sbjct: 6484 MHNKQKF*SIHPSNHASSPSIHPSIH*TMHSPP 6386
>LOC_Os03g63470:12003.t05564:unspliced-genomic nucleotide binding protein, putative, expressed| Length = 5105 Score = 34.5 bits (69), Expect = 1.4 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / +2 Query: 454 HPGIHGCLHANPGHWGRHPS 395 HP H C + PGHW R PS Sbjct: 749 HPPPHPCRRSGPGHWRRSPS 808
>LOC_Os01g15900:12001.t01441:unspliced-genomic expressed protein| Length = 3464 Score = 34.5 bits (69), Expect = 1.4 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +3 / +3 Query: 399 GCLPQWPGLAWRQPWI 446 GCL WP AW PWI Sbjct: 2700 GCLSSWPATAWNIPWI 2747
>LOC_Os06g04910:12006.t00380:unspliced-genomic hydrolase, NUDIX family protein, expressed| Length = 3082 Score = 26.7 bits (52), Expect(3) = 1.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 / +1 Query: 417 PGLAWRQPWIPGWRVPE 467 P AWR W+P RVP+ Sbjct: 259 PPPAWRLAWLPPARVPD 309 Score = 26.3 bits (51), Expect(3) = 1.8 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +3 / +3 Query: 711 RGRRVWEPFCYYRTNLACYYVC 776 RG R W FC Y+ + Y C Sbjct: 504 RGPRAWRLFCCYQRHSNYYIFC 569 Score = 22.6 bits (43), Expect(3) = 1.8 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = +3 / +1 Query: 750 TNLACYYVCNPSAPHL*VGF 809 +N+ + +C+ S PH+ +GF Sbjct: 2572 SNVRSWALCDCSPPHIIMGF 2631
>LOC_Os07g08260:12007.t00702:unspliced-genomic conserved hypothetical protein| Length = 521 Score = 33.6 bits (67), Expect = 2.6 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -3 / -3 Query: 511 HRPDIHHLHPGIHAHSGTRHPGIHGCL 431 HR HH H G H+H RH IH L Sbjct: 342 HRRQGHHRHHGCHSHHWIRHGRIHHLL 262
>LOC_Os05g41100:12005.t03649:unspliced-genomic zz domain protein, putative, expressed| Length = 2292 Score = 33.6 bits (67), Expect = 2.6 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = -3 / -3 Query: 526 SGTLHHRPDIHHLHPGIHAHSGTRHPGIHGCLH 428 S HH P HHLHP + HP H H Sbjct: 769 SSPRHHPPCYHHLHPSASLGTNRHHPRRHRHRH 671
>LOC_Os09g38400:12009.t03308:unspliced-genomic zinc finger protein hangover, putative, expressed| Length = 2233 Score = 28.1 bits (55), Expect(2) = 2.6 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 / -3 Query: 517 LHHRPDIHHLHPGIHAHSGTRHP 449 LHHR HHL G H H HP Sbjct: 1853 LHHRCLRHHLPQGHHHHHLHPHP 1785 Score = 22.6 bits (43), Expect(2) = 2.6 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = -3 / -3 Query: 442 HGCLHANPGHWGRHPSCHDH 383 H LH +P H R P H H Sbjct: 1808 HHHLHPHPLHRQRSPPRHHH 1749
>LOC_Os10g31420:12010.t02467:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 934 Score = 29.0 bits (57), Expect(2) = 2.9 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -3 / -1 Query: 454 HPGIHGCLHANPGHWGRHPSCHDHH 380 H IH C+H + H RHP HH Sbjct: 541 HNLIHHCIHRHHHHLVRHPEHMLHH 467 Score = 24.9 bits (48), Expect(2) = 2.9 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = -1 / -3 Query: 1101 GEIQFLLHKINNKGTRLLITTHTSKWLLDKFFQKKTYILFSVCALNVFVATTHSN 937 GE +L+ + K T + T + F KTY L + ++V T HS+ Sbjct: 908 GESVHILYLVVLKTTTFITTIQL*QLCHGILFWYKTYYLVHIYFRAIYVGTHHSH 744
>LOC_Os09g30050:12009.t02683:unspliced-genomic expressed protein| Length = 582 Score = 25.8 bits (50), Expect(2) = 2.9 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +2 / +3 Query: 860 SSKVASGHVCWFPCLFFF 913 SS + S +CWF FFF Sbjct: 279 SSLIRSSLICWFYFYFFF 332 Score = 24.9 bits (48), Expect(2) = 2.9 Identities = 6/8 (75%), Positives = 8/8 (100%) Frame = +2 / +3 Query: 905 FFFCMCEC 928 FFFC+C+C Sbjct: 327 FFFCVCDC 350
>LOC_Os07g39480:12007.t03609:unspliced-genomic OsWRKY78 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 5550 Score = 33.1 bits (66), Expect = 3.6 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -3 / +1 Query: 181 GSLPSHPCGLQQLGSPPLLMP 119 G+LP HP GLQ LGSP + P Sbjct: 229 GALPHHPRGLQPLGSPRVPRP 291
>LOC_Os06g43260:12006.t04016:unspliced-genomic hypothetical protein| Length = 2090 Score = 33.1 bits (66), Expect = 3.6 Identities = 14/42 (33%), Positives = 16/42 (38%) Frame = -3 / +3 Query: 502 DIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSCHDHHH 377 D+HH H H H H H + H H H HHH Sbjct: 1380 DMHHHHHHHHHHHHHHHHHTQPPHHHHNHHHHHHHGHHHHHH 1505
>LOC_Os04g40860:12004.t03647:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3838 Score = 33.1 bits (66), Expect = 3.6 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 / +3 Query: 905 FFFCMCECFYWFECV 949 FFFC C CF ++ECV Sbjct: 228 FFFCFCFCFCFWECV 272
>LOC_Os01g61100:12001.t05490:unspliced-genomic transposon protein, putative, unclassified| Length = 6382 Score = 33.1 bits (66), Expect = 3.6 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +2 / -1 Query: 869 VASGHVCWFPCLFFFCMCECFYWFECVVATNTLR 970 +AS H C F CL F C C W V++ LR Sbjct: 4582 LASCHCC*FLCLLMFSHCLCLSWCMAVLSFLLLR 4481
>LOC_Os07g41850:12007.t03840:unspliced-genomic C1-like domain containing protein, expressed| Length = 1230 Score = 33.1 bits (66), Expect = 3.6 Identities = 17/77 (22%), Positives = 34/77 (44%) Frame = +1 / +1 Query: 118 EASAVEENLAAEGHKDEKEDSHATEIYDDHQSNSADVPNLDREAPVNPDEEYPSVEAEQE 297 E EE E +E+E+ ++ + + + A D+E E E+E Sbjct: 925 EEEEEEEEEEPEEGGEEEEEPEEGGEEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEE 1104 Query: 298 KFDVEEQDAEPKEQQFQ 348 + D+EE + E +E++ + Sbjct: 1105 EEDIEEDENEEEEEEVE 1155
>LOC_Os01g26224:12001.t02329:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 9169 Score = 33.1 bits (66), Expect = 3.6 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 / -1 Query: 220 ADVPNLDREAPVNPDEEYPSVEAEQEKFDVEEQDAEPKEQQFQQP 354 AD + E P P+E AE+ + V+E+ AEP+E + P Sbjct: 7789 ADTVEEEAEEPEEPEEMVQEEVAEEPEEMVQEETAEPEEMVHEMP 7655
>LOC_Os12g06840:12012.t00569:unspliced-genomic protein binding protein, putative, expressed| Length = 2494 Score = 29.9 bits (59), Expect(2) = 3.8 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 / -2 Query: 675 GVCLDPLSVGVPASLGRPAT 616 G C DP +V P+S RP+T Sbjct: 1896 GFCTDPFTVSTPSSRSRPST 1837 Score = 24.9 bits (48), Expect(2) = 3.8 Identities = 9/20 (45%), Positives = 9/20 (45%) Frame = -3 / -3 Query: 511 HRPDIHHLHPGIHAHSGTRH 452 HRP HH H H RH Sbjct: 374 HRPHRHHRHRRRHRREHRRH 315
>LOC_Os01g70980:12001.t06395:unspliced-genomic expressed protein| Length = 2267 Score = 24.9 bits (48), Expect(2) = 4.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 / +3 Query: 796 CELVLLLQSSDCIWLV 843 CEL L S C+WLV Sbjct: 309 CELN*LFGSDQCVWLV 356 Score = 24.9 bits (48), Expect(2) = 4.7 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +2 / +3 Query: 905 FFFCMCECFYWFECVV 952 FFF C WF CVV Sbjct: 411 FFFLNCIFIVWFCCVV 458
>LOC_Os07g15600:12007.t01423:unspliced-genomic transcription regulator, putative, expressed| Length = 3266 Score = 31.3 bits (62), Expect(2) = 4.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +2 / +1 Query: 89 RHRRVWLPHQRHQQWRRT*LLKATRMRRKT 178 R RR W +R ++WRR + RMRR T Sbjct: 541 RRRRWWSRRRRRRRWRRWWWRRRRRMRRAT 630 Score = 23.5 bits (45), Expect(2) = 4.8 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +2 / +2 Query: 923 ECFYWFECVVATN 961 +C WFEC+ A N Sbjct: 1754 KCI*WFECI*ARN 1792
>LOC_Os09g25090:12009.t02189:unspliced-genomic CIPK-like protein 1, putative, expressed| Length = 1748 Score = 32.7 bits (65), Expect = 4.9 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -3 / +3 Query: 535 PGHSGTLHHRPDIHHLHPGIHAHS 464 P H RP HLHPG HAH+ Sbjct: 915 PPHRPPARRRPGQAHLHPGDHAHA 986
>LOC_Os08g07540:12008.t00643:unspliced-genomic hemimethylated DNA binding domain containing protein, expressed| Length = 5576 Score = 32.7 bits (65), Expect = 4.9 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +2 / +2 Query: 914 CMCECFYWFECVVATNTLRAQTENKMYVFF*KNLSSSH 1027 C C+C W VV +++QT +F ++SS+H Sbjct: 2195 CNCQCGDWTASVVGIELVKSQTNTMQGIFACGSISSAH 2308
>LOC_Os05g39110:12005.t03453:unspliced-genomic selT-like protein precursor, putative, expressed| Length = 3188 Score = 32.7 bits (65), Expect = 4.9 Identities = 13/32 (40%), Positives = 13/32 (40%) Frame = -3 / +1 Query: 535 PGHSGTLHHRPDIHHLHPGIHAHSGTRHPGIH 440 P H HH HH HP H H HP H Sbjct: 307 PHHPHPPHHPHPPHHPHPPHHPHPPHHHPHPH 402
>LOC_Os03g35540:12003.t03041:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6614 Score = 32.7 bits (65), Expect = 4.9 Identities = 10/23 (43%), Positives = 10/23 (43%) Frame = +3 / -1 Query: 402 CLPQWPGLAWRQPWIPGWRVPEW 470 C WP AW W PG P W Sbjct: 938 CCCSWPTTAWPPAWCPGTPPPAW 870
>LOC_Os03g13320:12003.t01127:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6809 Score = 32.7 bits (65), Expect = 4.9 Identities = 10/23 (43%), Positives = 10/23 (43%) Frame = +3 / -1 Query: 402 CLPQWPGLAWRQPWIPGWRVPEW 470 C WP AW W PG P W Sbjct: 1169 CCCSWPTTAWPPAWCPGTPPPAW 1101
>LOC_Os04g34720:12004.t03146:unspliced-genomic DNA binding protein, putative, expressed| Length = 9017 Score = 32.7 bits (65), Expect = 4.9 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 / +2 Query: 763 VIMSAIHPPPICELVLLLQSSD 828 ++ S +HPP ICE+V +L +SD Sbjct: 1460 LVTSQVHPPKICEMVRVLFTSD 1525
>LOC_Os03g58820:12003.t05134:unspliced-genomic aminoacyl-tRNA synthetase, putative, expressed| Length = 4483 Score = 32.7 bits (65), Expect = 4.9 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +1 / -2 Query: 199 DDHQSNSADVPNLDREAPVNPDEEYPSVEAEQEKFDVEEQD 321 + Q A +PN E P+NP E EQE VEE D Sbjct: 612 EKEQPCQAQIPNTPSETPLNPMNPSQWGEGEQEGAHVEEVD 490
>LOC_Os02g07340:12002.t00631:unspliced-genomic HEAT repeat family protein, expressed| Length = 13787 Score = 25.4 bits (49), Expect(2) = 5.5 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = +2 / -1 Query: 827 TAYGWSINVESSSKVASGHVCWFPCL 904 + + WSI+ +S S HVC C+ Sbjct: 6809 SVFPWSISYKSLVSKPSSHVCMCVCV 6732 Score = 24.0 bits (46), Expect(2) = 5.5 Identities = 6/14 (42%), Positives = 9/14 (64%) Frame = +2 / -2 Query: 908 FFCMCECFYWFECV 949 + C+C C Y + CV Sbjct: 6739 YVCVCVCMYVYVCV 6698
>LOC_Os05g03480:12005.t00245:unspliced-genomic isovaleryl-CoA dehydrogenase, mitochondrial precursor, putative,| expressed Length = 10908 Score = 31.3 bits (62), Expect(2) = 5.6 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 / +3 Query: 790 PICELVLLLQSSDCIWLVDKCGIFVQSSFRSC 885 P+C V S DC+W + G F S+ SC Sbjct: 6798 PLCGSVFAAASDDCLWSEETHGNFSDSAVVSC 6893 Score = 24.9 bits (48), Expect(2) = 5.6 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = +2 / +3 Query: 902 LFFFCMCECFYW 937 LFF C+ EC W Sbjct: 7701 LFFACLLECLIW 7736
>LOC_Os04g35280:12004.t03199:unspliced-genomic neutral/alkaline invertase, putative, expressed| Length = 4547 Score = 24.9 bits (48), Expect(2) = 6.0 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = -3 / +1 Query: 529 HSGTLHHRPDIHHLHPGIHAHSGTR 455 H G L H HPG+H G R Sbjct: 3091 HRGVLPHCGQQVQRHPGVHPGLGVR 3165 Score = 24.4 bits (47), Expect(2) = 6.0 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -3 / +1 Query: 457 RHPGIHGCLHANPGHWGRH 401 RHP +HG A G G H Sbjct: 3253 RHPCVHGDARAGGGDHGPH 3309
>LOC_Os01g70580:12001.t06357:unspliced-genomic thiamin pyrophosphokinase 1, putative, expressed| Length = 3177 Score = 25.4 bits (49), Expect(2) = 6.2 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +2 / +3 Query: 896 PCLFFFCMCECFYWFECVVA 955 P LFF CMC FE +A Sbjct: 702 PLLFFVCMCPLLARFESGLA 761 Score = 24.0 bits (46), Expect(2) = 6.2 Identities = 7/16 (43%), Positives = 12/16 (75%) Frame = +1 / +2 Query: 745 IELT*PVIMSAIHPPP 792 + + *P++ S I+PPP Sbjct: 644 VRMR*PIVSSFIYPPP 691
>LOC_Os05g38264:12005.t004725:unspliced-genomic expressed protein| Length = 1040 Score = 32.2 bits (64), Expect = 6.8 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = +2 / -2 Query: 890 WFPCLFFFCMCECFYWFEC 946 W PC++ + +C C ++F C Sbjct: 985 WQPCMYIYVLCTCTHFFYC 929
>LOC_Os04g42784:12004.t03824:unspliced-genomic DNA mismatch repair protein, putative, expressed| Length = 16390 Score = 32.2 bits (64), Expect = 6.8 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -3 / +3 Query: 868 FGRRFHIYRPTICSHWIGATKPTHRWG 788 + RR H+ P S W G P RWG Sbjct: 435 YSRRCHVRGPEYTSEW*GFWSPARRWG 515
>LOC_Os04g24500:12004.t02162:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1867 Score = 32.2 bits (64), Expect = 6.8 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 / +1 Query: 523 GTLHHRPDIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSC 392 G ++ PD HLH + A H GI LH H H +C Sbjct: 175 GKIYLPPDSAHLHTVVAAAHNAGHEGIQKTLHRVKAHIFIHLAC 306
>LOC_Os03g61290:12003.t05362:unspliced-genomic ATCHX19, putative, expressed| Length = 4985 Score = 32.2 bits (64), Expect = 6.8 Identities = 15/43 (34%), Positives = 15/43 (34%) Frame = -3 / +2 Query: 529 HSGTLHHRPDIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRH 401 H G H P G RHP HG H H GRH Sbjct: 3443 HQGARGAHRAQHRTRPEGAQRGGLRHPRAHGARHHLHDHAGRH 3571
>LOC_Os03g38120:12003.t03263:unspliced-genomic expressed protein| Length = 5806 Score = 32.2 bits (64), Expect = 6.8 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +2 / +1 Query: 806 FCCSNPVTAYGWSINVESSSKVASGHVCWFPCL 904 FC P YG + S +CWFPCL Sbjct: 1801 FCSVRPHFLYGKRYTTVDCPNINSF*ICWFPCL 1899
>LOC_Os09g19734:12009.t01708:unspliced-genomic isochorismate synthase 1, chloroplast precursor, putative, expressed| Length = 9737 Score = 29.0 bits (57), Expect(2) = 6.8 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = +2 / +3 Query: 914 CMCECFYWFECVVATNTLR 970 C C C YWF+C + +L+ Sbjct: 1989 CWC*CKYWFDCQSCSQSLQ 2045 Score = 26.7 bits (52), Expect(2) = 6.8 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = +2 / +2 Query: 110 PHQRHQQWRR 139 PH HQQWRR Sbjct: 341 PHHLHQQWRR 370
>LOC_Os01g35070:12001.t03062:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5452 Score = 30.9 bits (61), Expect(2) = 7.4 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +2 / +1 Query: 884 VCWFPCLFFFCMCECFYWFECVVATNTLR 970 +C F C F C+C WF VV +R Sbjct: 826 LC*FACFKFGCVCGSCMWFTSVVGCKRMR 912 Score = 24.0 bits (46), Expect(2) = 7.4 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +3 / +3 Query: 126 SSGGEPSC*RPQG*EGR 176 S GGE SC P G GR Sbjct: 618 SCGGERSCLSPSGSSGR 668
>LOC_Os11g41920:12011.t03725:unspliced-genomic expressed protein| Length = 4031 Score = 31.8 bits (63), Expect = 9.3 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 / -2 Query: 505 PDIHHLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSC 392 P IH +H I ++ T+H + CL+ P H +C Sbjct: 2983 PAIHRMHMSIQVYNHTKHFRLDTCLYTVPQLTVSHSAC 2870
>LOC_Os10g37920:12010.t03048:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed| Length = 1620 Score = 31.8 bits (63), Expect = 9.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 / +3 Query: 481 GIHAHSGTRHPGIHGCLHANP 419 G H H+G RHP HG A+P Sbjct: 1155 GAHVHAGRRHPRAHGIGAADP 1217
>LOC_Os10g28520:12010.t02203:unspliced-genomic CAF1 family ribonuclease containing protein| Length = 2243 Score = 31.8 bits (63), Expect = 9.3 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = -3 / +3 Query: 469 HSGTRHPGIHGCLHANPGHWGRHPSCH 389 H G HPG G PG GRHP H Sbjct: 207 HQGL*HPGRRGRQARRPGRPGRHPREH 287
>LOC_Os09g36982:12009.t03477:unspliced-genomic expressed protein| Length = 1843 Score = 31.8 bits (63), Expect = 9.3 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +3 / +2 Query: 675 LVVLFCLGSKVMRGRRVWEPFCYYRTNLACYYV 773 LV+ L K ++ +++W+PF + R + CY V Sbjct: 569 LVLSSMLQLKTLQYKQIWKPFSFVRKMILCYIV 667
>LOC_Os08g44890:12008.t04211:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4734 Score = 31.8 bits (63), Expect = 9.3 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 / +2 Query: 402 CLPQWPGLAWRQPWIPGWRVPEWA 473 C +W G A R W GW +P W+ Sbjct: 347 CAGRWYGAAGRCFWAAGWFIPGWS 418
>LOC_Os08g02240:12008.t00119:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6008 Score = 31.8 bits (63), Expect = 9.3 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 / +2 Query: 402 CLPQWPGLAWRQPWIPGWRVPEWA 473 C +W G A R W GW +P W+ Sbjct: 347 CAGRWYGAAGRCFWAAGWFIPGWS 418
>LOC_Os06g34690:12006.t03166:unspliced-genomic T-complex protein 1 subunit gamma, putative, expressed| Length = 6983 Score = 31.8 bits (63), Expect = 9.3 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3 / +1 Query: 997 NIHFVFSLRS*RVCCHNTFEPVKTLT 920 N HF+F L VCC FE KT T Sbjct: 4420 NNHFLFFLTGCHVCCKEHFEKPKTFT 4497
>LOC_Os05g34470:12005.t03041:unspliced-genomic expressed protein| Length = 3048 Score = 31.8 bits (63), Expect = 9.3 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 / -1 Query: 493 HLHPGIHAHSGTRHPGIHGCLHANPGHWGRHPSCHDHH 380 H+H I+ T+H G H H N +P+ H+H+ Sbjct: 1929 HIHEWIYTTKVTKHLGRHVVAHWNIDLINHNPTAHEHN 1816
>LOC_Os04g57140:12004.t05180:unspliced-genomic kinesin-like calmodulin binding protein, putative, expressed| Length = 10107 Score = 31.8 bits (63), Expect = 9.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 / +2 Query: 86 CRHRRVWLPHQRHQQWRR 139 CRH WL +H++WRR Sbjct: 524 CRHAAAWLGDLQHERWRR 577
>LOC_Os04g27800:12004.t02483:unspliced-genomic expressed protein| Length = 1918 Score = 31.8 bits (63), Expect = 9.3 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +2 / -3 Query: 206 ISLIQPTFQTWIVKLQ*TPMRNIPQLRQSKRSLTWKNRMPS 328 +++++PT QTWI + + N+P+L R + MP+ Sbjct: 935 MNIVKPTSQTWITHILLKKLCNLPRLT*EARPILDNTNMPN 813
>LOC_Os03g05350:12003.t00407:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4386 Score = 31.8 bits (63), Expect = 9.3 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 / +3 Query: 472 AHSGTRHPGIHGCLHANPGHWGRHPSCH 389 +H G R P G L A+P H G H H Sbjct: 2355 SHGGVRRPQSRGLLGADPRHAGLHQGLH 2438
>LOC_Os02g53470:12002.t04926:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4386 Score = 31.8 bits (63), Expect = 9.3 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 / +3 Query: 472 AHSGTRHPGIHGCLHANPGHWGRHPSCH 389 +H G R P G L A+P H G H H Sbjct: 2355 SHGGVRRPQSRGLLGADPRHAGLHQGLH 2438
>LOC_Os02g36590:12002.t03296:unspliced-genomic expressed protein| Length = 4928 Score = 31.8 bits (63), Expect = 9.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 / -3 Query: 408 PQWPGLAWRQPWIPGWRVPEWA 473 P +P A+ QPW P R P WA Sbjct: 3597 PDFPRAAFGQPWCPHRRPPPWA 3532
>LOC_Os02g33400:12002.t02983:unspliced-genomic F-box domain containing protein, expressed| Length = 2932 Score = 31.8 bits (63), Expect = 9.3 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -2 / -3 Query: 986 CFQFALLTCLLPQHIRTSKNTHTYRKRK 903 C + LL CL P+ +T +THT+ + + Sbjct: 500 CSSYTLLHCLFPKDQKTKTHTHTHTRNR 417
>LOC_Os06g10410:12006.t00919:unspliced-genomic mechanosensitive ion channel family protein, expressed| Length = 3303 Score = 31.8 bits (63), Expect = 9.3 Identities = 17/66 (25%), Positives = 30/66 (45%) Frame = +1 / -1 Query: 130 VEENLAAEGHKDEKEDSHATEIYDDHQSNSADVPNLDREAPVNPDEEYPSVEAEQEKFDV 309 V E A +D++ D + ++ D P D +AP + E P EA+ E+ + Sbjct: 711 VAEEEVALDEEDDERDDPMADEVAGEDADDHDAPLPDLQAPESSPLERPHHEADDEQREE 532 Query: 310 EEQDAE 327 E++ E Sbjct: 531 EDEHEE 514
>LOC_Os02g57150:12002.t05287:unspliced-genomic tubulin-specific chaperone A, putative, expressed| Length = 2053 Score = 31.8 bits (63), Expect = 9.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 / -3 Query: 966 NVFVATTHSNQ*KHSHIQKKKRQGNQ 889 N+ TH++ H+H QKKK++ NQ Sbjct: 1442 NLIFTHTHTHTHTHTHTQKKKKKSNQ 1365 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 364,713,471 Number of extensions: 5836601 Number of successful extensions: 32140 Number of sequences better than 10.0: 62 Length of query: 372 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 322 Effective length of database: 52,799,986 Effective search space: 17001595492 Effective search space used: 17001595492 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
