ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3k07 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g31000:12005.t02698:unspliced-genomic nascent polypeptide-associated complex alpha subunit-like protein,| putative, expressed Length = 1949 Score = 195 bits (421), Expect(2) = 3e-60 Identities = 89/112 (79%), Positives = 94/112 (83%) Frame = +3 / +2 Query: 399 ILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAA 578 ILFVISKPDVFKSP SDTYVIFGEAKIED EQFKAPDLSS++S PEASTAA Sbjct: 1352 ILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSSMLSKPEASTAA 1531 Query: 579 QEDDEDCDETGVEPKDIELVMTQAGVPRPKAVKALKSADGDIVSAIMELTN* 734 QEDDE DETGVEPKDIELVMTQA V R KAVKALK+A+GDIV+AIMELT * Sbjct: 1532 QEDDEAVDETGVEPKDIELVMTQATVSRSKAVKALKAANGDIVTAIMELTT* 1687 Score = 57.0 bits (118), Expect(2) = 3e-60 Identities = 30/39 (76%), Positives = 32/39 (82%) Frame = +1 / +1 Query: 283 QVEDLSRAGVRKRAGRPC*SLA*RLSQA*AV*LSRRARI 399 QVEDLSR VRK+AGRP *SLA* LS *AV LSRRAR+ Sbjct: 1144 QVEDLSRVVVRKKAGRPW*SLA*SLSLV*AVLLSRRARM 1260 Score = 112 bits (239), Expect(3) = 3e-51 Identities = 51/60 (85%), Positives = 52/60 (86%) Frame = -1 / -3 Query: 577 AAVEASGFEMTLLRSGALNCSAACDCSCELRSSILASPKMTYVSDAGLLNTSGLEMTNRI 398 AAV+ASGFE LLRSGALNCSAA CSCELRSSILASPKMT VSD GLL TSGLEMT RI Sbjct: 1530 AAVDASGFESMLLRSGALNCSAAWVCSCELRSSILASPKMT*VSDVGLLKTSGLEMTKRI 1351 Score = 72.5 bits (152), Expect(3) = 3e-51 Identities = 31/39 (79%), Positives = 31/39 (79%) Frame = -3 / -1 Query: 398 ILALLDSYTAHACDSLHAKLQHGLPALFLTPALLRSSTC 282 ILALLDS TAH D LHAKL HGLPA FLT LLRSSTC Sbjct: 1259 ILALLDSNTAHTSDRLHAKLHHGLPAFFLTTTLLRSSTC 1143 Score = 56.5 bits (117), Expect(3) = 3e-51 Identities = 26/34 (76%), Positives = 29/34 (85%) Frame = -1 / -3 Query: 727 VSSMIALTISPSADLSAFTALGLGTPAWVITSSM 626 VSSM+A+T+SP A LSAFTAL L T AWVITSSM Sbjct: 1680 VSSMMAVTMSPLAALSAFTALDLDTVAWVITSSM 1579 Score = 118 bits (253), Expect(2) = 6e-39 Identities = 58/97 (59%), Positives = 62/97 (63%) Frame = -2 / -1 Query: 690 QT*APSQPWASAHRPGS*PAQCPSAQLQSRHNPHHPPELL*KPRGLR*RC*DQAP*IAPQ 511 Q * PS PW S PGS PA+CPSA+ QSR PHH P LL P R C D AP* A Q Sbjct: 1643 QP*VPSPPWTSTRWPGSSPARCPSARHQSRRRPHHLPGLLSTPPASRACCSDPAP*TALQ 1464 Query: 510 PVTAAVS*DPQS*PPQK*HMCRMRGS*IHLVWR*QTG 400 P +AA S P+S P QK*H CRM GS* H VWR*Q G Sbjct: 1463 PGSAAASSGPRSWPRQK*HRCRM*GS*RHPVWR*QKG 1353 Score = 62.9 bits (131), Expect(2) = 6e-39 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = -2 / -3 Query: 405 TGYSCSS*QLHGSRL**SSCQASAWPSCSFSHSCSA*IF 289 + +SCSS*Q HGS **+SCQAS WPSC FSH SA*IF Sbjct: 1266 SSHSCSS*Q*HGSHQ**TSCQASPWPSCFFSHYDSA*IF 1150 Score = 79.4 bits (167), Expect(3) = 2e-34 Identities = 33/55 (60%), Positives = 37/55 (67%) Frame = +2 / +1 Query: 401 PVCHLQTRCIQEPRIRHICHFWGG*D*GS*LTAAVTGCGAIQGA*S*QRHLKPRG 565 P CHLQT C+QEP IRH+CHFW G D G L AA GC A+QGA S Q L+ G Sbjct: 1354 PFCHLQTGCLQEPYIRHLCHFWRGQDRGPELAAADPGCRAVQGAGSEQHALEAGG 1518 Score = 53.8 bits (111), Expect(3) = 2e-34 Identities = 24/45 (53%), Positives = 26/45 (57%) Frame = +2 / +1 Query: 602 RDWS*AEGH*AGYDPGRCAEAQGCEGAQVC*R*YSQCYHGTDELA 736 RDW AEGH AG DPG E QG EG Q C + +HGT LA Sbjct: 1555 RDWCRAEGHRAGDDPGHRVEVQGGEGTQGCQWRHRHSHHGTHNLA 1689 Score = 51.5 bits (106), Expect(3) = 2e-34 Identities = 24/40 (60%), Positives = 27/40 (67%) Frame = +3 / +3 Query: 282 ASGXXXXXXXXXXXXXAMLKLGMKTITGVSRVTVKKSKNI 401 ASG AM+KLGMK+ITGVSRVTVKKSKN+ Sbjct: 1143 ASGRSKQSRSEKKSRKAMVKLGMKSITGVSRVTVKKSKNV 1262 Score = 65.7 bits (137), Expect(3) = 1e-23 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = +1 / +3 Query: 400 SCLSSPNQMYSRAPHPTHMSFLGRLRLRILAHSCSHRLRSNSRRLILAASSQT 558 S LSSPN+M SRA HPT MSFL R R R A SC RL+S+SRR I AA S++ Sbjct: 1353 SFLSSPNRMSSRALHPTPMSFLARPRSRT*ARSCRPRLQSSSRRRI*AACSRS 1511 Score = 40.9 bits (83), Expect(3) = 1e-23 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = +2 / +2 Query: 344 WHEDYHRREPCNCQEEQE 397 WHE YH EPC CQEEQE Sbjct: 1205 WHEVYHWCEPCYCQEEQE 1258 Score = 40.9 bits (83), Expect(3) = 1e-23 Identities = 17/22 (77%), Positives = 17/22 (77%) Frame = +1 / +3 Query: 601 TRLELSRRTLSWL*PRPVCRGP 666 TRL SRRT SW *PRP CRGP Sbjct: 1554 TRLVSSRRTSSW**PRPPCRGP 1619 Score = 68.4 bits (143), Expect(3) = 9e-23 Identities = 29/64 (45%), Positives = 37/64 (57%) Frame = -3 / -2 Query: 725 QFHDSTDYITVSRLERLHSLGPRHTGLGHNQLNVLRXXXXXXXXXXXXXSCCRSLGV*DD 546 +FHD D + + LE LH LGPRH GLGH+QL+VLR CCR L + + Sbjct: 1678 EFHDGCDDVAIGSLECLHRLGPRHGGLGHHQLDVLRLDTSLVDGLIIFLGCCRRLRLREH 1499 Query: 545 AAKI 534 AA+I Sbjct: 1498 AAQI 1487 Score = 42.8 bits (87), Expect(3) = 9e-23 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = -3 / -2 Query: 470 LPKNDICVGCGALEYIWFGDDKQDI 396 L KNDI VGC ALE I FGDDK+D+ Sbjct: 1423 LAKNDIGVGCRALEDIRFGDDKKDL 1349 Score = 33.6 bits (67), Expect(3) = 9e-23 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -1 / -2 Query: 397 FLLFLTVTRLTPVI 356 FLLFLTVTRLTPVI Sbjct: 1258 FLLFLTVTRLTPVI 1217
>LOC_Os01g71230:12001.t06419:unspliced-genomic nascent polypeptide-associated complex alpha subunit-like protein 3,| putative, expressed Length = 2759 Score = 105 bits (223), Expect(3) = 6e-55 Identities = 47/65 (72%), Positives = 50/65 (76%) Frame = +3 / +1 Query: 399 ILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAA 578 ILFVISKPDVFKSP SDTYVIFGEAKIED EQFKAPDLS+VIS E S AA Sbjct: 2146 ILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVISKAEPSAAA 2325 Query: 579 QEDDE 593 Q+D+E Sbjct: 2326 QDDEE 2340 Score = 95.9 bits (203), Expect(3) = 6e-55 Identities = 42/55 (76%), Positives = 50/55 (90%) Frame = +3 / +1 Query: 570 TAAQEDDEDCDETGVEPKDIELVMTQAGVPRPKAVKALKSADGDIVSAIMELTN* 734 +AA +DDE+ DE+GVEPKDIELVMTQA V R +AVKALK+A+GDIV+AIMELTN* Sbjct: 2314 SAAAQDDEEVDESGVEPKDIELVMTQATVSRSRAVKALKAANGDIVTAIMELTN* 2478 Score = 52.8 bits (109), Expect(3) = 6e-55 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = +1 / +1 Query: 286 VEDLSRAGVRKRAGRPC*SLA*RLSQA*AV*LSRRAR 396 VE LSR G RKRAG+PC +LA*R S *AV LS+RAR Sbjct: 1936 VEGLSRVGARKRAGKPCRNLA*RPSLV*AVSLSKRAR 2046 Score = 110 bits (235), Expect(3) = 5e-48 Identities = 50/61 (81%), Positives = 52/61 (85%) Frame = -1 / -1 Query: 577 AAVEASGFEMTLLRSGALNCSAACDCSCELRSSILASPKMTYVSDAGLLNTSGLEMTNRI 398 AA E S FEMTLLRSGALNCSAA CSCELRSSI ASPKMT VS+ GLL TSGLEMTNRI Sbjct: 2324 AAAEGSAFEMTLLRSGALNCSAA*VCSCELRSSIFASPKMT*VSEFGLLKTSGLEMTNRI 2145 Query: 397 F 395 + Sbjct: 2144 W 2142 Score = 62.5 bits (130), Expect(3) = 5e-48 Identities = 26/38 (68%), Positives = 27/38 (71%) Frame = -3 / -1 Query: 398 ILALLDSYTAHACDSLHAKLQHGLPALFLTPALLRSST 285 +LAL DS TAH D LHAK HG PALFL P LLR ST Sbjct: 2048 VLALFDSDTAHTSDGLHAKFLHGFPALFLAPTLLRPST 1935 Score = 57.4 bits (119), Expect(3) = 5e-48 Identities = 24/39 (61%), Positives = 28/39 (71%) Frame = -3 / -3 Query: 734 LVRQFHDSTDYITVSRLERLHSLGPRHTGLGHNQLNVLR 618 LVRQ HD +D +TVS L+RLH RH GL H+Q NVLR Sbjct: 2478 LVRQLHDGSDNVTVSSLQRLHRPRSRHGGLCHHQFNVLR 2362 Score = 58.8 bits (122), Expect(3) = 2e-27 Identities = 35/66 (53%), Positives = 40/66 (60%) Frame = -2 / -2 Query: 600 HNPHHPPELL*KPRGLR*RC*DQAP*IAPQPVTAAVS*DPQS*PPQK*HMCRMRGS*IHL 421 H P PELL K R LR*R Q P* A Q +AA S DP+S P ++* C GS* HL Sbjct: 2347 HRPPRHPELLQKARPLR*RYSGQVP*TALQLESAAASSDPRSSPHRR*RRCLSLGS*RHL 2168 Query: 420 VWR*QT 403 V R*+T Sbjct: 2167 V*R*RT 2150 Score = 51.9 bits (107), Expect(3) = 2e-27 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = -1 / -1 Query: 733 *FVSSMIALTISPSADLSAFTALGLGTPAWVITSSM 626 *FVSSM+A+T+SP A SAFTAL L T A VITSSM Sbjct: 2477 *FVSSMMAVTMSPLAAFSAFTALDLDTVACVITSSM 2370 Score = 49.6 bits (102), Expect(3) = 2e-27 Identities = 25/36 (69%), Positives = 25/36 (69%) Frame = -2 / -3 Query: 396 SCSS*QLHGSRL**SSCQASAWPSCSFSHSCSA*IF 289 SCS * HGS * SSCQ SAW SCSFS S SA* F Sbjct: 2046 SCSF***HGSHQ*WSSCQVSAWLSCSFSRSYSA*TF 1939 Score = 63.4 bits (132), Expect(3) = 3e-27 Identities = 30/55 (54%), Positives = 36/55 (65%) Frame = +2 / +3 Query: 404 VCHLQTRCIQEPRIRHICHFWGG*D*GS*LTAAVTGCGAIQGA*S*QRHLKPRGF 568 V HL TRC+QEP++RH+ H G D GS L AA + C A+QG * RHLK R F Sbjct: 2151 VRHL*TRCLQEPKLRHLRHLR*GEDRGSELAAADSSCRAVQGT*PE*RHLKGRAF 2315 Score = 59.3 bits (123), Expect(3) = 3e-27 Identities = 25/50 (50%), Positives = 31/50 (62%) Frame = +2 / +3 Query: 608 WS*AEGH*AGYDPGRCAEAQGCEGAQVC*R*YSQCYHGTDELAVPNLVIL 757 W AEGH* G D G E +G EGA+ C*R*+ C+HG DEL V++ Sbjct: 2352 WRRAEGH*TGDDTGHRVEIEGGEGAEGC*R*HCHCHHGADELVESRNVVV 2501 Score = 37.3 bits (75), Expect(3) = 3e-27 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +2 Query: 344 WHEDYHRREPCNCQEEQE 397 WHED+H EPC+ Q+EQE Sbjct: 1994 WHEDHHWCEPCHYQKEQE 2047 Score = 51.5 bits (106), Expect(4) = 4e-16 Identities = 26/52 (50%), Positives = 29/52 (55%) Frame = -2 / -2 Query: 738 TASSSVP**H*LYHRQQT*APSQPWASAHRPGS*PAQCPSAQLQSRHNPHHP 583 + SSS P* * HR Q APS P S P S P QCPSA+ Q+ P HP Sbjct: 2482 STSSSAP*WQ*QCHR*QPSAPSPPSISTRWPVSSPVQCPSARRQTHRPPRHP 2327 Score = 31.3 bits (62), Expect(4) = 4e-16 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -1 / -2 Query: 397 FLLFLTVTRLTPVIV 353 FLLFL VTRLTPV+V Sbjct: 2047 FLLFLIVTRLTPVMV 2003 Score = 29.9 bits (59), Expect(4) = 4e-16 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3 / -3 Query: 470 LPKNDICVGCGALEYIWFGDDKQDIL 393 L ++D+ V ALE IWF DD+Q+++ Sbjct: 2217 LTEDDVGV*VWALEDIWFRDDEQNLV 2140 Score = 25.8 bits (50), Expect(4) = 4e-16 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -3 / -3 Query: 575 CCRSLGV*DDAAKI 534 CCR LG+*DD ++ Sbjct: 2322 CCRRLGL*DDVTQV 2281 Score = 55.6 bits (115), Expect(2) = 1e-08 Identities = 27/59 (45%), Positives = 35/59 (59%) Frame = +3 / +3 Query: 282 ASGXXXXXXXXXXXXXAMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYV 458 ASG AM KLGMKTITGVSRVT+KKSKN+ +I+ +F + + Y+ Sbjct: 1932 ASGRSKQSRSEKKSRKAMQKLGMKTITGVSRVTIKKSKNVSCLITVMPLFLVGSQNCYI 2108 Score = 28.1 bits (55), Expect(2) = 1e-08 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +1 / +2 Query: 607 LELSRRTLSWL*PRPVCR 660 L SRRTL+W * RP CR Sbjct: 2351 LASSRRTLNW**HRPPCR 2404 Score = 47.3 bits (97), Expect = 2e-04 Identities = 27/53 (50%), Positives = 30/53 (56%) Frame = +1 / +2 Query: 403 CLSSPNQMYSRAPHPTHMSFLGRLRLRILAHSCSHRLRSNSRRLILAASSQTP 561 C SS NQM SRA T S R R RI A SC +L+S+SR L SSQ P Sbjct: 2150 CSSSLNQMSSRAQTQTPTSSSVRRRSRI*ARSCRLKLQSSSRHLT*VTSSQRP 2308
>LOC_Os03g02960:12003.t00183:unspliced-genomic nascent polypeptide-associated complex alpha subunit-like protein,| putative, expressed Length = 2251 Score = 99.1 bits (210), Expect(3) = 1e-35 Identities = 44/60 (73%), Positives = 47/60 (78%) Frame = -1 / -3 Query: 577 AAVEASGFEMTLLRSGALNCSAACDCSCELRSSILASPKMTYVSDAGLLNTSGLEMTNRI 398 AA ASG ++TLLRS LNC AAC CS ELRSSILASP MTYVSD GLL TSGL+ TN I Sbjct: 1001 AAAAASGLDITLLRSCILNCCAACACSWELRSSILASPNMTYVSDVGLLKTSGLDTTNSI 822 Score = 48.7 bits (100), Expect(3) = 1e-35 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = -3 / -2 Query: 728 RQFHDSTDYITVSRLERLHSLGPRHTGLGHNQLNV 624 R+ HD + V RLERL LGPRH GL H++++V Sbjct: 1155 RELHDGAHNVAVVRLERLDGLGPRHAGLRHDEVDV 1051 Score = 40.5 bits (82), Expect(3) = 1e-35 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = -3 / -2 Query: 398 ILALLDSYTAHACDSLHAKLQHGLPALFLTPALL 297 IL LD A + D H++L HGL AL L PALL Sbjct: 735 ILGSLDGNPADSRDGFHSELHHGLAALLLAPALL 634 Score = 93.2 bits (197), Expect(3) = 1e-29 Identities = 39/66 (59%), Positives = 48/66 (72%) Frame = +3 / +1 Query: 399 ILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAA 578 ILFV+SKPDVFKSP S+TYVIFGEAKIED +QF+ DLS V+S P+A+ AA Sbjct: 823 ILFVVSKPDVFKSPTSETYVIFGEAKIEDLSSQLQAQAAQQFRMQDLSKVMSKPDAAAAA 1002 Query: 579 QEDDED 596 D+E+ Sbjct: 1003 PADEEE 1020 Score = 46.4 bits (95), Expect(3) = 1e-29 Identities = 16/24 (66%), Positives = 23/24 (95%) Frame = +3 / +1 Query: 330 AMLKLGMKTITGVSRVTVKKSKNI 401 AM+KLGMK +TGVSR+T+K++KN+ Sbjct: 667 AMMKLGMKPVTGVSRITIKRAKNV 738 Score = 28.6 bits (56), Expect(3) = 1e-29 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +2 / +3 Query: 602 RDWS*AEGH*AGYDPGRCAEAQGCEGAQVC*R*YSQCYHGTDELAVP 742 RD A H +D G+ QG +GAQ R + + +HG L P Sbjct: 1029 RDRDRAPRHRPRHDAGQRVAGQGRQGAQGARRRHCERHHGAHGLKPP 1169 Score = 90.4 bits (191), Expect = 2e-17 Identities = 38/55 (69%), Positives = 47/55 (85%) Frame = +3 / +1 Query: 564 ASTAAQEDDEDCDETGVEPKDIELVMTQAGVPRPKAVKALKSADGDIVSAIMELT 728 A+ A +++E+ DETG+EP+DI+LVMTQA V R KAVKALK+ DGDIVSAIMELT Sbjct: 991 AAAAPADEEEEVDETGIEPRDIDLVMTQASVSRAKAVKALKAHDGDIVSAIMELT 1155 Score = 43.7 bits (89), Expect(3) = 5e-07 Identities = 22/34 (64%), Positives = 25/34 (73%) Frame = -1 / -3 Query: 727 VSSMIALTISPSADLSAFTALGLGTPAWVITSSM 626 VSSM+ALT+SPS LSA TAL T A V+T SM Sbjct: 1154 VSSMMALTMSPSCALSALTALARDTLACVMTRSM 1053 Score = 27.2 bits (53), Expect(3) = 5e-07 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -2 / -1 Query: 351 SCQASAWPSCSFSHSCSA 298 S +AS+WP S S SCSA Sbjct: 688 SFRASSWPCGSSSRSCSA 635 Score = 26.7 bits (52), Expect(3) = 5e-07 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / -1 Query: 543 C*DQAP*IAPQPVTAAVS*DPQS*PPQK*HMCRMRGS*IHLVWR*QT 403 C A * A +P AA S P+S PP+ * GS* W +T Sbjct: 967 CSGLAS*TAARPAPAAGSSGPRSWPPRI*RTSPTSGS*RRQAWTPRT 827
>LOC_Os03g02970:12003.t00184:unspliced-genomic endoribonuclease Dicer, putative, expressed| Length = 9765 Score = 99.1 bits (210), Expect(2) = 7e-29 Identities = 44/60 (73%), Positives = 47/60 (78%) Frame = -1 / +3 Query: 577 AAVEASGFEMTLLRSGALNCSAACDCSCELRSSILASPKMTYVSDAGLLNTSGLEMTNRI 398 AA ASG ++TLLRS LNC AAC CS ELRSSILASP MTYVSD GLL TSGL+ TN I Sbjct: 9585 AAAAASGLDITLLRSCILNCCAACACSWELRSSILASPNMTYVSDVGLLKTSGLDTTNSI 9764 Score = 48.7 bits (100), Expect(2) = 7e-29 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = -3 / +2 Query: 728 RQFHDSTDYITVSRLERLHSLGPRHTGLGHNQLNV 624 R+ HD + V RLERL LGPRH GL H++++V Sbjct: 9431 RELHDGAHNVAVVRLERLDGLGPRHAGLRHDEVDV 9535 Score = 93.2 bits (197), Expect(2) = 4e-21 Identities = 39/66 (59%), Positives = 48/66 (72%) Frame = +3 / -3 Query: 399 ILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAA 578 ILFV+SKPDVFKSP S+TYVIFGEAKIED +QF+ DLS V+S P+A+ AA Sbjct: 9763 ILFVVSKPDVFKSPTSETYVIFGEAKIEDLSSQLQAQAAQQFRMQDLSKVMSKPDAAAAA 9584 Query: 579 QEDDED 596 D+E+ Sbjct: 9583 PADEEE 9566 Score = 28.6 bits (56), Expect(2) = 4e-21 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +2 / -2 Query: 602 RDWS*AEGH*AGYDPGRCAEAQGCEGAQVC*R*YSQCYHGTDELAVP 742 RD A H +D G+ QG +GAQ R + + +HG L P Sbjct: 9557 RDRDRAPRHRPRHDAGQRVAGQGRQGAQGARRRHCERHHGAHGLKPP 9417 Score = 90.4 bits (191), Expect = 2e-17 Identities = 38/55 (69%), Positives = 47/55 (85%) Frame = +3 / -3 Query: 564 ASTAAQEDDEDCDETGVEPKDIELVMTQAGVPRPKAVKALKSADGDIVSAIMELT 728 A+ A +++E+ DETG+EP+DI+LVMTQA V R KAVKALK+ DGDIVSAIMELT Sbjct: 9595 AAAAPADEEEEVDETGIEPRDIDLVMTQASVSRAKAVKALKAHDGDIVSAIMELT 9431 Score = 43.7 bits (89), Expect(2) = 5e-06 Identities = 22/34 (64%), Positives = 25/34 (73%) Frame = -1 / +3 Query: 727 VSSMIALTISPSADLSAFTALGLGTPAWVITSSM 626 VSSM+ALT+SPS LSA TAL T A V+T SM Sbjct: 9432 VSSMMALTMSPSCALSALTALARDTLACVMTRSM 9533 Score = 26.7 bits (52), Expect(2) = 5e-06 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = -2 / +1 Query: 543 C*DQAP*IAPQPVTAAVS*DPQS*PPQK*HMCRMRGS*IHLVWR*QT 403 C A * A +P AA S P+S PP+ * GS* W +T Sbjct: 9619 CSGLAS*TAARPAPAAGSSGPRSWPPRI*RTSPTSGS*RRQAWTPRT 9759
>LOC_Os01g50360:12001.t04471:unspliced-genomic NAC domain containing protein, expressed| Length = 2528 Score = 84.5 bits (178), Expect(2) = 4e-22 Identities = 38/52 (73%), Positives = 40/52 (76%) Frame = -1 / -2 Query: 577 AAVEASGFEMTLLRSGALNCSAACDCSCELRSSILASPKMTYVSDAGLLNTS 422 AA ASG ++TLLRS LNC AAC CS ELRSSILASP MTY SD GLL TS Sbjct: 2242 AAAAASGLDITLLRSCILNCCAACACSWELRSSILASPNMTYDSDVGLLKTS 2087 Score = 40.5 bits (82), Expect(2) = 4e-22 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = -3 / -3 Query: 398 ILALLDSYTAHACDSLHAKLQHGLPALFLTPALL 297 IL LD A + D H++L HGL AL L PALL Sbjct: 1974 ILGSLDGNPADSRDGFHSELHHGLAALLLAPALL 1873 Score = 73.5 bits (154), Expect(2) = 5e-20 Identities = 31/57 (54%), Positives = 39/57 (68%) Frame = +3 / +3 Query: 423 DVFKSPASDTYVIFGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAAQEDDE 593 DVFKSP S++YVIFGEAKIED +QF+ DLS V+S P+A+ AA D+E Sbjct: 2088 DVFKSPTSESYVIFGEAKIEDLSSQLQAQAAQQFRMQDLSKVMSKPDAAAAAPADEE 2258 Score = 44.6 bits (91), Expect(2) = 5e-20 Identities = 15/24 (62%), Positives = 23/24 (95%) Frame = +3 / +1 Query: 330 AMLKLGMKTITGVSRVTVKKSKNI 401 AM+KLGMK +TGVSR+T++++KN+ Sbjct: 1906 AMMKLGMKPVTGVSRITIERAKNV 1977 Score = 46.0 bits (94), Expect = 4e-04 Identities = 16/34 (47%), Positives = 26/34 (76%) Frame = +3 / +3 Query: 564 ASTAAQEDDEDCDETGVEPKDIELVMTQAGVPRP 665 A+ A +++++ DETG+EP+DI++VMTQA P Sbjct: 2232 AAAAPADEEQEVDETGIEPRDIDVVMTQASSSSP 2333
>LOC_Os07g22450:12007.t01949:unspliced-genomic nascent polypeptide-associated complex alpha subunit-like protein,| putative Length = 578 Score = 46.4 bits (95), Expect = 3e-04 Identities = 16/24 (66%), Positives = 23/24 (95%) Frame = +3 / +3 Query: 330 AMLKLGMKTITGVSRVTVKKSKNI 401 AM+KLGMK +TGVSR+T+K++KN+ Sbjct: 462 AMMKLGMKPVTGVSRITIKRAKNV 533 Score = 40.5 bits (82), Expect = 0.018 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = -3 / -1 Query: 398 ILALLDSYTAHACDSLHAKLQHGLPALFLTPALL 297 IL LD A + D H++L HGL AL L PALL Sbjct: 530 ILGSLDGNPADSRDGFHSELHHGLAALLLAPALL 429
>LOC_Os07g44540:12007.t04094:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2961 Score = 30.9 bits (61), Expect(2) = 0.062 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ HR + + P+ + S H+P HPP+ Sbjct: 810 WATGHRWNNGFSHPPAERGCSNHSPRHPPQ 899 Score = 29.9 bits (59), Expect(2) = 0.062 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK+ H Sbjct: 575 SSSAYSWLTTKRRNSAKPEKRTKSAH 652
>LOC_Os10g04660:12010.t00349:unspliced-genomic hypothetical protein| Length = 4099 Score = 38.2 bits (77), Expect = 0.088 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -2 / -1 Query: 678 PSQPWASAHRPGS*PAQCPSAQLQSRHNPHHPP 580 PS+P A HRP + PA P L S +P HPP Sbjct: 223 PSRPTAPPHRPTAPPAPPPPPTLPSPSSPPHPP 125
>LOC_Os05g24960:12005.t02153:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2495 Score = 29.5 bits (58), Expect(2) = 0.43 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWNSGLSHPPAERSCSNHSPRHPPQ 899 Score = 28.1 bits (55), Expect(2) = 0.43 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 575 SSSAYSWLTTKRRNSAKPEKRTKIAH 652
>LOC_Os10g42460:12010.t03471:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2138 Score = 28.6 bits (56), Expect(2) = 0.68 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 314 WATRRRRESGLSHPPAERGCSNHSPRHPPQ 403 Score = 28.1 bits (55), Expect(2) = 0.68 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +1 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 79 SSSAYSWLTTKRKNSAEPEKRTKIAH 156
>LOC_Os01g39370:12001.t03467:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6000 Score = 29.5 bits (58), Expect(2) = 0.70 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 575 SSSAYSWLTTKRKNSAEPEKRTKTAH 652 Score = 28.6 bits (56), Expect(2) = 0.70 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWNSGLSHPPAERDCSNHSPRHPPQ 899
>LOC_Os04g48900:12004.t04406:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2700 Score = 29.5 bits (58), Expect(2) = 0.84 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ MTTKR +S P K TK H Sbjct: 575 SSSAYSWMTTKRRNSAEPEKRTKIAH 652 Score = 27.2 bits (53), Expect(2) = 0.84 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R + + P+ + S H+P HPP+ Sbjct: 810 WATRRRWNNGLSHPPAERDCSNHSPRHPPQ 899
>LOC_Os05g44460:12005.t03935:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2640 Score = 28.1 bits (55), Expect(2) = 1.1 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 575 SSSAYSWLTTKRRNSAKPEKRTKIAH 652 Score = 28.1 bits (55), Expect(2) = 1.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWDSGLSHPPTERGCSNHSPRHPPQ 899
>LOC_Os01g36000:12001.t03150:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2729 Score = 28.6 bits (56), Expect(2) = 1.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 782 WATRRRWNSGLSHPPAERGCSNHSPRHPPQ 871 Score = 27.6 bits (54), Expect(2) = 1.1 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTK 766 SSS ++ +TTKR +S P K TK Sbjct: 548 SSSAYSWLTTKRKNSAEPEKRTK 616
>LOC_Os12g20210:12012.t01862:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5654 Score = 29.5 bits (58), Expect(2) = 1.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 792 WATRRRRNSGLSHPPAERGCSNHSPRHPPQ 881 Score = 27.6 bits (54), Expect(2) = 1.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 557 SSSVYSWLTTKRRNSAEPEKRTKIAH 634
>LOC_Os11g29570:12011.t02561:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5806 Score = 29.0 bits (57), Expect(2) = 1.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRRDSSLSHPPAERGCSNHSPRHPPQ 899 Score = 28.1 bits (55), Expect(2) = 1.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 575 SSSAYSWLTTKRKNSAEPEKQTKIAH 652
>LOC_Os07g13680:12007.t01233:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4889 Score = 28.6 bits (56), Expect(2) = 1.4 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*HN 754 SSS ++ +TTKR +S P K TK H+ Sbjct: 575 SSSAYSWLTTKRRNSANPEKRTKIAHD 655 Score = 28.1 bits (55), Expect(2) = 1.4 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWDSGLSHPPAERGCSNHSPRHPPQ 899
>LOC_Os03g04810:12003.t00357:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2811 Score = 28.1 bits (55), Expect(2) = 1.6 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 575 SSSAYSWLTTKRRNSAKPEKQTKITH 652 Score = 27.6 bits (54), Expect(2) = 1.6 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ S H+P HPP+ Sbjct: 810 WATRRRWDSGLSHPPAEHGCSNHSPRHPPQ 899
>LOC_Os01g31730:12001.t02754:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5605 Score = 28.6 bits (56), Expect(2) = 1.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 804 WATRRRWNSGLSHPPAERGCSNHSPRHPPQ 893 Score = 28.1 bits (55), Expect(2) = 1.6 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 569 SSSAYSWLTTKRRNSAKPEKRTKIAH 646
>LOC_Os07g31970:12007.t02882:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6578 Score = 28.6 bits (56), Expect(2) = 1.8 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 1268 WATRRRWNSGLSHPPAERGCSNHSPRHPPQ 1357 Score = 28.1 bits (55), Expect(2) = 1.8 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +1 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 1033 SSSAYSWLTTKRRNSAKPEKRTKIAH 1110
>LOC_Os05g44660:12005.t03954:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1944 Score = 29.5 bits (58), Expect(2) = 2.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWNSGLSHPPAERGYSNHSPRHPPQ 899 Score = 25.4 bits (49), Expect(2) = 2.1 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR + P K TK H Sbjct: 575 SSSAYSWLTTKRRNIAKPEKRTKIAH 652
>LOC_Os01g55520:12001.t04963:unspliced-genomic pollen-specific kinase partner protein, putative, expressed| Length = 2739 Score = 33.6 bits (67), Expect = 2.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 / -2 Query: 663 ASAHRPGS*PAQCPSAQLQSRHNPHHP 583 +SA RP PAQ PSA+ RH HP Sbjct: 2429 SSAFRPPVRPAQAPSARAYRRHRSSHP 2349
>LOC_Os05g39170:12005.t03459:unspliced-genomic hypothetical protein| Length = 1550 Score = 33.1 bits (66), Expect = 2.9 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -2 / +3 Query: 699 HRQQT*APSQPWASAHRPGS*PAQCPSAQLQSRHN 595 H +Q P P RPG+ P Q P LQ RH+ Sbjct: 270 HGEQRRPPPPPHRVRSRPGARPCQVPHPHLQGRHH 374
>LOC_Os12g27910:12012.t02502:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2244 Score = 28.1 bits (55), Expect(2) = 3.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWDSGLSHPPAERGCSNHSPRHPPQ 899 Score = 26.3 bits (51), Expect(2) = 3.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ TTKR +S P K TK H Sbjct: 575 SSSAYSWPTTKRRNSAKPEKRTKIAH 652
>LOC_Os05g18930:12005.t01660:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2262 Score = 28.1 bits (55), Expect(2) = 3.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 575 SSSAYSWLTTKRRNSAKPEKRTKIAH 652 Score = 26.3 bits (51), Expect(2) = 3.2 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ S H+P HPP+ Sbjct: 810 WATRRRWDSGLSHPPAECGCSNHSPRHPPQ 899
>LOC_Os01g01100:12001.t00010:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5557 Score = 28.6 bits (56), Expect(2) = 3.8 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 257 WATRRRWNSGLSHPPAERGCSNHSPRHPPQ 346 Score = 26.7 bits (52), Expect(2) = 3.8 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 / +1 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR ++ P K TK H Sbjct: 22 SSSAYSWLTTKRRNNAKPEKRTKIAH 99
>LOC_Os07g27834:12007.t02476:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8172 Score = 28.1 bits (55), Expect(2) = 3.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K TK H Sbjct: 3503 SSSAYSWLTTKRRNSAKPEKRTKIVH 3580 Score = 27.6 bits (54), Expect(2) = 3.9 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ S H+P HPP+ Sbjct: 3738 WATRRRWDSGLSHPPAEHGCSNHSPQHPPQ 3827
>LOC_Os08g34410:12008.t03181:unspliced-genomic conserved hypothetical protein| Length = 768 Score = 32.7 bits (65), Expect = 4.0 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 / +3 Query: 636 PAQCPSAQLQSRHNPHHPPELL*KPRGLR 550 PA+ P A PHHPP LL + GLR Sbjct: 72 PAEEPDAAAAPDAVPHHPPRLLPRAAGLR 158
>LOC_Os04g50864:12004.t005492:unspliced-genomic expressed protein| Length = 3169 Score = 32.7 bits (65), Expect = 4.0 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +2 / +1 Query: 686 VC*R*YSQCYHGTDELAVPNLVILCQFFVVFMGIHEL*RLVVMCVNFELLCISKD 850 +C R YS C+H LA ++ + C F VV +++ R+ N LL I ++ Sbjct: 2569 ICFRGYSLCFHLPHSLAWLSISLYCPFLVVNKQLNDKERVAAALENPNLLDIVEE 2733
>LOC_Os06g35390:12006.t03236:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2189 Score = 29.0 bits (57), Expect(2) = 4.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 / +1 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*HN 754 SSS ++ +TTKR +S P K TK H+ Sbjct: 22 SSSAYSWLTTKRKNSAEPKKRTKIAHD 102 Score = 24.9 bits (48), Expect(2) = 4.1 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+ HPP+ Sbjct: 257 WATRRRWNSGLSHPPAERGCSNHSSRHPPQ 346
>LOC_Os11g19830:12011.t01753:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6186 Score = 28.6 bits (56), Expect(2) = 4.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWNSGLSHPPAERGCSNHSPRHPPQ 899 Score = 26.7 bits (52), Expect(2) = 4.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN 763 SSS ++ +TTKR SS P K K+ Sbjct: 575 SSSAYSWLTTKRRSSAKPEKRRKS 646
>LOC_Os02g44480:12002.t04038:unspliced-genomic vegetative storage protein, putative| Length = 1698 Score = 32.2 bits (64), Expect = 5.4 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -3 / -3 Query: 380 SYTAHACDSLHAKLQHGLPALFLTPALLRSSTC 282 SYT+ C S+ + LQH P+L A R S C Sbjct: 469 SYTSRTCRSMRSSLQHNPPSLCPQQAGARLSQC 371
>LOC_Os08g34450:12008.t03185:unspliced-genomic conserved hypothetical protein| Length = 714 Score = 32.2 bits (64), Expect = 5.5 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 / +3 Query: 636 PAQCPSAQLQSRHNPHHPPELL*KPRGLR 550 PA+ P A PHHPP LL + GLR Sbjct: 72 PAEEPDAASAPDAVPHHPPRLLPRSAGLR 158
>LOC_Os11g07730:12011.t00664:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6121 Score = 29.5 bits (58), Expect(2) = 5.5 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRRNSGLSHPPAERGCSNHSPRHPPQ 899 Score = 25.4 bits (49), Expect(2) = 5.5 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ + TKR +S P K TK H Sbjct: 575 SSSAYSWLPTKRRNSAEPEKRTKIAH 652
>LOC_Os07g20680:12007.t01872:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4658 Score = 29.5 bits (58), Expect(2) = 5.9 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ H+ S + P+ + S H+P HPP+ Sbjct: 813 WATRHQWNSGLSHPPAERSCSNHSP*HPPQ 902 Score = 24.9 bits (48), Expect(2) = 5.9 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTT 769 SSS ++ +TTKR +S P K T Sbjct: 578 SSSVYSWLTTKRRNSAEPEKRT 643
>LOC_Os03g37250:12003.t03183:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7481 Score = 29.0 bits (57), Expect(2) = 6.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 2387 WATRRRRDSGLSHPPAERGCSNHSPRHPPQ 2476 Score = 25.8 bits (50), Expect(2) = 6.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 / +1 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K K H Sbjct: 2152 SSSAYSWLTTKRKNSAEPEKQNKIAH 2229
>LOC_Os09g11100:12009.t00900:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5824 Score = 28.6 bits (56), Expect(2) = 7.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +3 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 810 WATRRRWNSGLSHPPAERGCSNHSPRHPPQ 899 Score = 25.8 bits (50), Expect(2) = 7.1 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTKR +S P K K H Sbjct: 575 SSSAYSWLTTKRRNSAKPEKRNKIAH 652
>LOC_Os11g14570:12011.t01288:unspliced-genomic expressed protein| Length = 3907 Score = 31.8 bits (63), Expect = 7.5 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -2 / -2 Query: 885 CMKKKLIRHCFRSLLIQSSSKFTHMTTKRYSSC 787 C KK R F LLIQ +H TT Y+ C Sbjct: 2499 CQKKSTTRFLFGKLLIQYLKNISHPTTV*YALC 2401
>LOC_Os04g37670:12004.t03337:unspliced-genomic steroid nuclear receptor, ligand-binding, putative, expressed| Length = 5270 Score = 31.8 bits (63), Expect = 7.5 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -2 / -2 Query: 696 RQQT*APSQPWASAHRPGS*PAQCPSAQLQS 604 R+ AP PWA P P+ CPS++++S Sbjct: 562 RRAATAPPTPWAPRSWPPPTPSPCPSSRIES 470
>LOC_Os04g35390:12004.t03210:unspliced-genomic hypothetical protein| Length = 1168 Score = 31.8 bits (63), Expect = 7.5 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +1 / +1 Query: 400 SCLSSPNQMYSRAPHPTHMSFLGRLRLRILAHSCSHR 510 S LS P +S AP P H FL LR + S HR Sbjct: 172 SSLSFPFAPFSPAPSPFHHRFLSPLRASAVPFSWEHR 282
>LOC_Os01g56910:12001.t05101:unspliced-genomic expressed protein| Length = 8924 Score = 31.8 bits (63), Expect = 7.5 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +1 / +1 Query: 406 LSSPNQMYSRAPHPTHMSFLGRLRLRILAHSCSHRLRSNSRRLILAASS 552 LSSP+ +SRA T M F R + S + N RR +AA++ Sbjct: 1876 LSSPSPRHSRASFDTAMPFTPRRHTQSSPRSPGRQFSDNPRRQTIAAAA 2022
>LOC_Os01g13170:12001.t01180:unspliced-genomic ubiquitin-conjugating enzyme E2, putative, expressed| Length = 4749 Score = 31.8 bits (63), Expect = 7.5 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +1 / -1 Query: 412 SPNQMYSRAPHPTHMSFLGRLRLRILAHSCSHRLRS 519 S ++ S PH +H R RL ++ H C HR S Sbjct: 816 SRHRTQSPIPHDSHSRDAWRARLPVMRHRCQHRQAS 709
>LOC_Os04g04070:12004.t00295:unspliced-genomic hypothetical protein| Length = 1819 Score = 28.6 bits (56), Expect(2) = 8.4 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 / +3 Query: 689 RLERLHSLGPRHTGLGHN 636 R+ H GP HTG+GH+ Sbjct: 1341 RVRPAHGAGPPHTGVGHH 1394 Score = 24.0 bits (46), Expect(2) = 8.4 Identities = 7/10 (70%), Positives = 10/10 (100%) Frame = -2 / +1 Query: 867 IRHCFRSLLI 838 IRHC+R+LL+ Sbjct: 724 IRHCYRTLLV 753
>LOC_Os09g25510:12009.t02230:unspliced-genomic transposon protein, putative, unclassified| Length = 3468 Score = 25.4 bits (49), Expect(3) = 8.5 Identities = 10/29 (34%), Positives = 12/29 (41%) Frame = +2 / -3 Query: 347 HEDYHRREPCNCQEEQEYPVCHLQTRCIQ 433 HE H EPC+ CH + IQ Sbjct: 2929 HEQ*HH*EPCHSLPSTHLQSCHFHSSHIQ 2843 Score = 23.5 bits (45), Expect(3) = 8.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 / -1 Query: 833 LCISKDLKQCLMSFF 877 L SK K C+MSFF Sbjct: 1581 LFFSKKSKHCIMSFF 1537 Score = 23.5 bits (45), Expect(3) = 8.5 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3 / -3 Query: 870 ASFSCIETNH 899 ASF+C ETNH Sbjct: 1063 ASFACRETNH 1034
>LOC_Os09g27760:12009.t02454:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2948 Score = 29.0 bits (57), Expect(2) = 9.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 666 WASAHRPGS*PAQCPSAQLQSRHNPHHPPE 577 WA+ R S + P+ + S H+P HPP+ Sbjct: 809 WATRRRRDSGLSHPPAERGCSNHSPRHPPQ 898 Score = 24.0 bits (46), Expect(2) = 9.6 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 834 SSSKFTHMTTKRYSSCIPMKTTKN*H 757 SSS ++ +TTK+ +S P K K H Sbjct: 575 SSSAYSWLTTKQRNSAKPEKRAKIAH 652 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 276,119,236 Number of extensions: 4209450 Number of successful extensions: 17375 Number of sequences better than 10.0: 45 Length of query: 308 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 259 Effective length of database: 52,856,264 Effective search space: 13689772376 Effective search space used: 13689772376 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
