| Clone Name | FLbaf11e22 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g05860:12005.t00476:unspliced-genomic DNA-directed RNA polymerase II largest subunit, putative, expressed| Length = 9894 Score = 61.1 bits (127), Expect = 8e-09 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = -3 / -2 Query: 322 ITISSGLRMPNCTSCTLATSAGEYGNLAS 236 ITISSGLR PNCT+ TLATSAGEYGNLA+ Sbjct: 92 ITISSGLRTPNCTASTLATSAGEYGNLAA 6 Score = 60.6 bits (126), Expect = 1e-08 Identities = 24/28 (85%), Positives = 27/28 (96%) Frame = +3 / +1 Query: 240 ARFPYSPAEVAKVQLVQFGILSPDEIVI 323 ARFPYSPAEVAKV+ VQFG+LSPDEIV+ Sbjct: 10 ARFPYSPAEVAKVEAVQFGVLSPDEIVM 93
>LOC_Os05g08850:12005.t00762:unspliced-genomic cytochrome P450 86A2, putative, expressed| Length = 2598 Score = 41.4 bits (84), Expect = 0.007 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = -2 / -3 Query: 230 TPTAAPAPPRVWVSDPAAHRERAAARSLGGWAART 126 T A+PAPPR +S P AHR R R W A T Sbjct: 1126 TAAASPAPPRAGMSPPGAHRRRTPRRRRWWWCAGT 1022
>LOC_Os01g25520:12001.t02268:unspliced-genomic ferredoxin-nitrite reductase, putative| Length = 2516 Score = 32.7 bits (65), Expect(2) = 0.25 Identities = 13/33 (39%), Positives = 13/33 (39%) Frame = -2 / -1 Query: 227 PTAAPAPPRVWVSDPAAHRERAAARSLGGWAAR 129 P APA P W P R A S GW R Sbjct: 188 PPVAPAAPPTWPRPPLVSRRTARTPSTTGWGGR 90 Score = 24.9 bits (48), Expect(2) = 0.25 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 / -1 Query: 421 EASQAHPNQLKLQLHAERRETKQ 353 E +Q HPNQ K + ++R K+ Sbjct: 494 EGNQTHPNQSKARKCVDQRSKKR 426
>LOC_Os01g37460:12001.t03289:unspliced-genomic zinc finger protein, putative, expressed| Length = 1653 Score = 35.4 bits (71), Expect = 0.44 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 / -1 Query: 258 PAEVAKVQLVQFGILSPDEIVIPRLPHPHRR 350 PA +A++ L + +L+ +PRLPH HRR Sbjct: 339 PAPLARLPLAEVHVLARPAAPVPRLPHRHRR 247
>LOC_Os01g03280:12001.t00220:unspliced-genomic expressed protein| Length = 1648 Score = 31.8 bits (63), Expect(2) = 0.56 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / -2 Query: 182 AAHRERAAARSLGGWAARTVTVWGTLNFWAA 90 AA R+RAA GG AA+ + W T + W A Sbjct: 108 AAPRQRAARHLPGGVAAQALECWTTASAWPA 16 Score = 24.0 bits (46), Expect(2) = 0.56 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -2 / -3 Query: 245 PRVHFTPTAAPAPPRVW 195 P +H+T A P P VW Sbjct: 1247 PGMHWTTGAPPGTPPVW 1197 Score = 31.8 bits (63), Expect = 5.6 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / -3 Query: 182 AAHRERAAARSLGGWAARTVTVWGTLNFWAA 90 AA R+RAA GG AA+ + W T + W A Sbjct: 1436 AAPRQRAARHLPGGVAAQALECWTTASAWPA 1344
>LOC_Os04g59120:12004.t05370:unspliced-genomic mtN21 nodulin protein-like, putative, expressed| Length = 3302 Score = 27.2 bits (53), Expect(2) = 0.66 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 / +1 Query: 310 SGLRMPNCTSCTLATSAGEYGNLASISPPRRR 215 SG P C+ CT A S+ ++ SPP RR Sbjct: 2188 SGSAAPCCSPCTRAPSSTPGTPTSTSSPPWRR 2283 Score = 24.9 bits (48), Expect(2) = 0.66 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -3 / +2 Query: 232 SPPRRRRRH 206 +PPRRRRRH Sbjct: 2282 APPRRRRRH 2308
>LOC_Os03g47010:12003.t04063:unspliced-genomic hydrolase, hydrolyzing O-glycosyl compounds, putative, expressed| Length = 2787 Score = 26.3 bits (51), Expect(2) = 0.66 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 / -1 Query: 289 CTSCTLATSAGEYGNLASISPPRRRRR 209 C S AG A+ +PPRRRRR Sbjct: 1563 CWSA*CTRPAGSCSTPAAPAPPRRRRR 1483 Score = 25.8 bits (50), Expect(2) = 0.66 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 / -3 Query: 230 TPTAAPAPPRVWVSDPAAHRERAAARSLGGWAARTVTVWG 111 TP+AA APP V+ R R + SL AR + G Sbjct: 1498 TPSAAAAPPAAAVTFTTTSRLRTLSVSLRRCLARALRSTG 1379
>LOC_Os11g16350:12011.t01415:unspliced-genomic expressed protein| Length = 1294 Score = 27.6 bits (54), Expect(2) = 0.70 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -2 / +2 Query: 224 TAAPAPPRVWVSDPAAHRERAAA 156 T+ PAP R W P R R +A Sbjct: 182 TSPPAPRRAWPRTPRTRRRRTSA 250 Score = 24.4 bits (47), Expect(2) = 0.70 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -3 / +3 Query: 229 PPRRRRRH 206 PPRRRRRH Sbjct: 54 PPRRRRRH 77
>LOC_Os02g55610:12002.t05136:unspliced-genomic serine-rich protein, putative, expressed| Length = 895 Score = 34.1 bits (68), Expect = 1.1 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 / -3 Query: 221 AAPAPPRVWVSDPAAHRERAAARSLGGWAARTVTV 117 AA PPR D AA RA R GGW R + V Sbjct: 419 AAAHPPRAAKPDGAARGRRAGRRRRGGWRRRRLVV 315
>LOC_Os01g50940:12001.t04528:unspliced-genomic DNA binding protein, putative, expressed| Length = 2113 Score = 34.1 bits (68), Expect = 1.1 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 / +1 Query: 245 PRVHFTPTAAPAPPRVWVSDPAAHRERAAARSLG 144 PR ++ P+PPR W S R R AARS G Sbjct: 1129 PRRRWSRRNQPSPPRAWTSPRRTCRNRPAARSGG 1230
>LOC_Os01g06510:12001.t00534:unspliced-genomic arginyl-tRNA synthetase, putative, expressed| Length = 5196 Score = 34.1 bits (68), Expect = 1.1 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 / -1 Query: 478 PHIELKLTTSNPMTVHPELEASQAHPNQLKL 386 PH++ + TT NP + L+AS HP Q+ L Sbjct: 897 PHVDQQHTTGNPQNLVLRLQASVPHPGQVLL 805
>LOC_Os02g07120:12002.t00609:unspliced-genomic cullin-associated NEDD8-dissociated protein 1, putative, expressed| Length = 10231 Score = 29.5 bits (58), Expect(2) = 1.2 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 / -3 Query: 247 NLASISPPRRRRRHLGFGS 191 NLA +SP RRRRR G G+ Sbjct: 296 NLAMVSP*RRRRRRWGVGA 240 Score = 27.6 bits (54), Expect(2) = 1.2 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -1 / -2 Query: 549 CVTMDQLQHIFVRSSSANL 493 C+TMDQLQH F S+ + Sbjct: 6051 CITMDQLQHNFSFRQSSEM 5995
>LOC_Os09g08710:12009.t00665:unspliced-genomic expressed protein| Length = 2980 Score = 33.6 bits (67), Expect = 1.6 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -2 / -2 Query: 245 PRVHFTPTAAPAPPRVWVSDPAAHRERAA 159 P V TP A P P +W DPAA RAA Sbjct: 375 PTVAATPRAGPPYPSLWRPDPAAPELRAA 289
>LOC_Os08g28980:12008.t02653:unspliced-genomic RNA exonuclease 4, putative, expressed| Length = 4760 Score = 33.6 bits (67), Expect = 1.6 Identities = 17/37 (45%), Positives = 17/37 (45%) Frame = -2 / +2 Query: 245 PRVHFTPTAAPAPPRVWVSDPAAHRERAAARSLGGWA 135 PR P A APPR S P AHR R GG A Sbjct: 188 PRRRHHPRQAQAPPRPPFSGPRAHRARRGGGGGGGQA 298
>LOC_Os03g29810:12003.t02594:unspliced-genomic ATP-dependent Clp protease proteolytic subunit 3, putative, expressed| Length = 3469 Score = 27.6 bits (54), Expect(2) = 2.0 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +2 / +2 Query: 362 FSSLCVELKLELVWVGLASFQLWM 433 F C+ LKL L W L S +W+ Sbjct: 2021 FLKSCLSLKLALSWTSLVSC*IWL 2092 Score = 27.2 bits (53), Expect(2) = 2.0 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 / +2 Query: 9 LSPDPLSPPISRRRRGPVGSIPLELDFSRPKV*R 110 LSP PLS P RR G + L + S P V*+ Sbjct: 212 LSPHPLSGPSFFRRSGAKSGVALPGEIS*PLV*Q 313
>LOC_Os12g37100:12012.t03390:unspliced-genomic expressed protein| Length = 3701 Score = 33.1 bits (66), Expect = 2.2 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -2 / +1 Query: 245 PRVHFTPTAAPAPPRVW 195 PR H TP PAPPR W Sbjct: 196 PRTHRTPPTLPAPPRSW 246
>LOC_Os09g26260:12009.t02305:unspliced-genomic ATP binding protein, putative, expressed| Length = 1734 Score = 33.1 bits (66), Expect = 2.2 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -2 / +1 Query: 230 TPTAAPAPPRVWVSDPAAHRERAAARSLGGWAARTVTVWGTLNF 99 T AA PP+ S ++ AA + G AAR++T+ G LNF Sbjct: 925 TAAAAAQPPKPRASIDGGAIDQDAAAAPAGAAARSITLSGLLNF 1056
>LOC_Os06g15910:12006.t01464:unspliced-genomic potassium transporter 8, putative, expressed| Length = 3914 Score = 33.1 bits (66), Expect = 2.2 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 / -2 Query: 484 TTPHIELKLTTSNPMTVHPELEASQAHPNQLKLQLHAERRETKQ 353 TTP + T S+ HP L+++ HP+ +K + +R E K+ Sbjct: 193 TTPRLWYASTASSRHHHHPPLQSTIKHPSNIKPRTQPKREEEKK 62
>LOC_Os03g11710:12003.t00972:unspliced-genomic expressed protein| Length = 1053 Score = 33.1 bits (66), Expect = 2.2 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -3 / +2 Query: 295 PNCTSCTLATSAGEYGNLASISPPRRRRRHLG 200 P C+ CT A A + AS SPPRR R G Sbjct: 671 PGCSPCTSARRASTCRSAASPSPPRRGWRRRG 766
>LOC_Os02g28490:12002.t02543:unspliced-genomic hypothetical protein| Length = 1393 Score = 26.7 bits (52), Expect(2) = 2.9 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 / -2 Query: 681 PCNTIQVGYLAEK 719 PC+ +QVGYLA K Sbjct: 240 PCHRLQVGYLAAK 202 Score = 26.3 bits (51), Expect(2) = 2.9 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / -3 Query: 374 CVELKLELVWVGLASFQLWMNCH 442 C+ L+ +VWV L S L+ CH Sbjct: 776 CIILQCHVVWVLLVSHILFTLCH 708
>LOC_Os11g01842:12011.t00081:unspliced-genomic SAG20, putative| Length = 1476 Score = 32.7 bits (65), Expect = 3.0 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -2 / +2 Query: 224 TAAPAPPRVWVSDPAAHRERAAARSLGGWAARTVTVWGTLNFW 96 +A+ PP S P A R A ARS G T W + + W Sbjct: 572 SASTWPPSCCCSTPRASRSTATARSSGSSEETTARTWPSTSAW 700
>LOC_Os07g25710:12007.t02268:unspliced-genomic CDPK substrate protein 1, putative, expressed| Length = 5621 Score = 32.7 bits (65), Expect = 3.0 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +2 / +2 Query: 386 KLELVWVGLASFQLWMN 436 KL LVWVG ASFQL +N Sbjct: 2444 KLRLVWVGAASFQLSLN 2494
>LOC_Os06g30030:12006.t02707:unspliced-genomic plant-specific domain TIGR01570 family protein, expressed| Length = 1579 Score = 32.7 bits (65), Expect = 3.0 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -2 / -2 Query: 227 PTAAPAPPRVWVSDPAAHRERAAARSLGGWAARTVT 120 P AAPAPP +S A R R R+ W R T Sbjct: 633 PAAAPAPPDDPLSSSATPRRRRRRRTTTAWTGRAWT 526
>LOC_Os06g07100:12006.t00594:unspliced-genomic RING-H2 finger protein ATL5I, putative, expressed| Length = 2501 Score = 32.7 bits (65), Expect = 3.0 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -2 / +2 Query: 230 TPTAAPAPPRVWVSDPAAHRERAAARSLGGWAARTVTVW 114 T T P PP S A RER A+R+ W + W Sbjct: 1040 TATTPPPPPPASASAVALSRERKASRAAAAWTPGGASPW 1156
>LOC_Os03g17010:12003.t01482:unspliced-genomic THO complex subunit 4, putative, expressed| Length = 3726 Score = 32.7 bits (65), Expect = 3.0 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -2 / -1 Query: 224 TAAPAPPRVWVSDPAAHRERAAARSLGGW 138 + +PAPP S P H A R+LGGW Sbjct: 456 SGSPAPPPTARSKP*PHVRSVAVRTLGGW 370
>LOC_Os01g43500:12001.t03865:unspliced-genomic hypothetical protein| Length = 3441 Score = 32.7 bits (65), Expect = 3.0 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -2 / +1 Query: 185 PAAHRERAAARSLGGWAARTVTVWGTLNFWAAKI 84 P A R R RS GGW R T W L +A + Sbjct: 268 PTAPRTRRLGRSQGGWPTRARTAWRPLPSTSAPV 369
>LOC_Os03g08700:12003.t00726:unspliced-genomic expressed protein| Length = 6641 Score = 28.1 bits (55), Expect(2) = 3.5 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 / -1 Query: 648 LTTNHFAQSLTSSPSWQNTHS 586 L+ H + +LT+ SW++THS Sbjct: 2801 LSKTHLSTNLTTKNSWRHTHS 2739 Score = 26.7 bits (52), Expect(2) = 3.5 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 / -2 Query: 227 PTAAPAPPRVWVSDPAAHRERAAAR 153 P A AP R + PAA R RAA+R Sbjct: 601 PAGARAPARPPPAWPAARRSRAASR 527
>LOC_Os08g14620:12008.t01337:unspliced-genomic expressed protein| Length = 2279 Score = 32.2 bits (64), Expect = 4.1 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +3 / +3 Query: 306 PDEIVIPRLPHPHRRL 353 PD I++PRLP P RRL Sbjct: 213 PDPILVPRLPRPRRRL 260
>LOC_Os06g02054:12006.t00101:unspliced-genomic F-box domain containing protein| Length = 4365 Score = 32.2 bits (64), Expect = 4.1 Identities = 15/27 (55%), Positives = 15/27 (55%) Frame = +3 / +2 Query: 3 DALSPDPLSPPISRRRRGPVGSIPLEL 83 D S PLSPP RRRG VG EL Sbjct: 4181 DGRSDTPLSPPAVARRRGSVGQTLQEL 4261
>LOC_Os05g02530:12005.t00152:unspliced-genomic chloride intracellular channel 6, putative, expressed| Length = 3613 Score = 32.2 bits (64), Expect = 4.1 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +3 / +1 Query: 24 LSPPISRRRRGPVGSIPL 77 +SPPI+RRRR P S+P+ Sbjct: 118 ISPPIARRRRNPKSSLPV 171
>LOC_Os04g43164:12004.t005535:unspliced-genomic expressed protein| Length = 2479 Score = 32.2 bits (64), Expect = 4.1 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 / -3 Query: 557 IYTLYACCLVEWVFCQLG 610 +YT+Y CC EW+F G Sbjct: 1121 VYTVYLCCAYEWIFLCCG 1068
>LOC_Os04g38290:12004.t03400:unspliced-genomic expressed protein| Length = 6591 Score = 32.2 bits (64), Expect = 4.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 / -2 Query: 42 RRRRGPVGSIPLELDFSRPKV*RAPDSDC 128 RRR GPV + + D + PKV ++P DC Sbjct: 113 RRRFGPVRDVRVVCDLASPKVEKSPLRDC 27
>LOC_Os04g38260:12004.t03396:unspliced-genomic expressed protein| Length = 4838 Score = 32.2 bits (64), Expect = 4.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 / -2 Query: 42 RRRRGPVGSIPLELDFSRPKV*RAPDSDC 128 RRR GPV + + D + PKV ++P DC Sbjct: 97 RRRFGPVRDVRVVCDLASPKVEKSPLRDC 11
>LOC_Os03g12760:12003.t01074:unspliced-genomic helix-loop-helix DNA-binding domain containing protein| Length = 5450 Score = 32.2 bits (64), Expect = 4.1 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / -3 Query: 182 AAHRERAAARSLGGWAARTVTVWGTLNFWAA 90 AA R+RAA GG AA+ + W T + W A Sbjct: 108 AAPRQRAACHLPGGVAAQALECWTTASAWPA 16
>LOC_Os02g12380:12002.t01036:unspliced-genomic histone deacetylase, putative, expressed| Length = 6090 Score = 32.2 bits (64), Expect = 4.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 / +1 Query: 3 DALSPDPLSPPISRRRRGPVGSIPLEL 83 D + PDPL PP+ RRR P PL L Sbjct: 436 DPVRPDPLPPPLQRRRGLPRLRRPLRL 516
>LOC_Os10g11910:12010.t00982:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1493 Score = 29.0 bits (57), Expect(2) = 4.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 / +1 Query: 648 LTTNHFAQSLTSSPSWQNTHSTK 580 L QSL+S+PS + THSTK Sbjct: 850 LNRTRLQQSLSSTPSSRKTHSTK 918 Score = 23.5 bits (45), Expect(2) = 4.2 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 / +1 Query: 453 PATR*QFIQSWKLAKPTQTS 394 P+T QF+Q + AKP QT+ Sbjct: 1384 PSTVSQFMQQEETAKPWQTT 1443
>LOC_Os06g37020:12006.t03397:unspliced-genomic expressed protein| Length = 1289 Score = 30.4 bits (60), Expect(2) = 4.9 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -3 / -1 Query: 262 AGEYGNLASISPPRRRRRHLGFG 194 AG + L S PPRRRRR G G Sbjct: 995 AGNHTRLTSRCPPRRRRRRRGRG 927 Score = 21.7 bits (41), Expect(2) = 4.9 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -2 / -1 Query: 221 AAPAPPRVWVSDPAAHRERAAARSLGG 141 AAP PPRV P +AR+ G Sbjct: 692 AAPPPPRVPPPPPPPSSRPRSARTPTG 612
>LOC_Os12g36800:12012.t03360:unspliced-genomic hypothetical protein| Length = 325 Score = 25.8 bits (50), Expect(2) = 5.3 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -3 / -1 Query: 286 TSCTLATSAGEYGNLASISPPRRRRRHL 203 T+C L++ G+ S PP RRR L Sbjct: 148 TACHLSSVCAAAGHFPSAPPPPSRRRPL 65 Score = 23.1 bits (44), Expect(2) = 5.3 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -2 / -3 Query: 212 APPRVWVSDPAAHRERAAARS 150 APP V VS P AAARS Sbjct: 80 APPPVAVSRPPPPSTAAAARS 18
>LOC_Os12g38360:12012.t03517:unspliced-genomic expressed protein| Length = 632 Score = 31.8 bits (63), Expect = 5.6 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -3 / -1 Query: 310 SGLRMPNCTSCTLATSAGEYGNLASISPPRRRRR 209 S L+ P C SC+ T+A GN S S RRRR Sbjct: 338 SPLKDPPCCSCSAPTTAIAAGNTTSSSSCCRRRR 237
>LOC_Os12g06940:12012.t00579:unspliced-genomic hypothetical protein| Length = 452 Score = 31.8 bits (63), Expect = 5.6 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / -3 Query: 182 AAHRERAAARSLGGWAARTVTVWGTLNFWAA 90 AA R+RAA GG AA+ + W T + W A Sbjct: 108 AAPRQRAARHLPGGVAAQALECWTTASAWPA 16
>LOC_Os09g16380:12009.t01425:unspliced-genomic ABC1 protein, putative| Length = 12995 Score = 31.8 bits (63), Expect = 5.6 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / +1 Query: 182 AAHRERAAARSLGGWAARTVTVWGTLNFWAA 90 AA R+RAA GG AA+ + W T + W A Sbjct: 10666 AAPRQRAARHLPGGVAAQALECWTTASAWPA 10758
>LOC_Os07g43980:12007.t04040:unspliced-genomic ATP-dependent RNA helicase DDX49, putative, expressed| Length = 4007 Score = 31.8 bits (63), Expect = 5.6 Identities = 15/39 (38%), Positives = 15/39 (38%) Frame = -2 / -2 Query: 242 RVHFTPTAAPAPPRVWVSDPAAHRERAAARSLGGWAART 126 R T A P W A R R GGWAART Sbjct: 505 RARGTARRAAPPAPAWARARAPRRRMGPRRGGGGWAART 389
>LOC_Os04g30090:12004.t02696:unspliced-genomic expressed protein| Length = 1318 Score = 31.8 bits (63), Expect = 5.6 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -2 / -3 Query: 245 PRVHFTPTAAPAPPRVWVSDPAAHRERAAARSL 147 P H +PPR V+ A RERA ARSL Sbjct: 989 PPAHLPSQPIISPPRTCVARMRAERERAVARSL 891
>LOC_Os02g15750:12002.t01368:unspliced-genomic expressed protein| Length = 3403 Score = 31.8 bits (63), Expect = 5.6 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = -2 / +3 Query: 227 PTAAPAPPRVWVSDPAAHRERAAARSLGGWA 135 PT APPR PAA R R AR + G A Sbjct: 99 PTPLTAPPRARARAPAARRRRLRARDILGAA 191
>LOC_Os02g07800:12002.t00676:unspliced-genomic expressed protein| Length = 3025 Score = 31.8 bits (63), Expect = 5.6 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 / -3 Query: 295 PNCTSCTLATSAGEYGNLASISPPRRRRRHLG 200 P+ T+ T ATSA + S +PP R RR LG Sbjct: 269 PSSTAATSATSASVSAGVHSGAPPERVRRGLG 174
>LOC_Os01g25990:12001.t02309:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 8289 Score = 31.8 bits (63), Expect = 5.6 Identities = 15/35 (42%), Positives = 15/35 (42%) Frame = +3 / -2 Query: 30 PPISRRRRGPVGSIPLELDFSRPKV*RAPDSDCPC 134 PP SRRRRGP P S S CPC Sbjct: 386 PPRSRRRRGPPAPPPAPSSLSSSSSSSPFHSSCPC 282
>LOC_Os05g44560:12005.t03945:unspliced-genomic kinesin motor domain containing protein, expressed| Length = 7592 Score = 31.8 bits (63), Expect = 5.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 / +3 Query: 637 IGCKSLVRFELQVVLHVILFKWDIW 711 IGC SL RF + +L V F +IW Sbjct: 4230 IGCSSLTRFLVHFLLKVYFFTMEIW 4304
>LOC_Os09g37200:12009.t03194:unspliced-genomic agmatine coumaroyltransferase, putative, expressed| Length = 1441 Score = 25.4 bits (49), Expect(2) = 7.4 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 / +1 Query: 236 HFTPTAAPAPPRVWVSDPAAHRERAAARSL 147 H AAP P V + PAA R RA R + Sbjct: 613 HGGGAAAPPPGDVPATRPAARRVRAPRRGI 702 Score = 23.1 bits (44), Expect(2) = 7.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 / +3 Query: 271 ATSAGEYGNLASISPPRRRRR 209 ++S G + S PPRRRRR Sbjct: 567 SSSRGAAPRVGSPWPPRRRRR 629
>LOC_Os10g01100:12010.t00010:unspliced-genomic receptor-like protein kinase, putative, expressed| Length = 2947 Score = 29.5 bits (58), Expect(2) = 7.5 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -2 / -1 Query: 230 TPTAAPAPPRVWVSDPAAHRERAAARSLGGWAA 132 TP A P+P W A AAAR GG A Sbjct: 1702 TPRAPPSPRTPWSPPSAPRTRTAAARRRGGTPA 1604 Score = 23.1 bits (44), Expect(2) = 7.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -3 / -2 Query: 436 VHPELEASQAHPNQL 392 + PEL S AHP QL Sbjct: 1800 LRPELRLSPAHPVQL 1756
>LOC_Os09g31438:12009.t02787:unspliced-genomic squamosa promoter-binding-like protein 9, putative, expressed| Length = 3394 Score = 31.3 bits (62), Expect = 7.7 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 / +1 Query: 322 ITISSGLRMPNCTSCTLATSAGEYGNLASISPPRRRR 212 I + +GL C C+ + + NL + PPRRRR Sbjct: 310 IVVVAGLEQRFCQQCSR*KTKNQNQNLLLLPPPRRRR 420
>LOC_Os09g16510:12009.t01438:unspliced-genomic OsWRKY74 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 2312 Score = 31.3 bits (62), Expect = 7.7 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 / +1 Query: 6 ALSPDPLSPPISRRRRGPVGSIPLELDFSRP 98 A +P PLSPP++ RR P S SRP Sbjct: 505 ASAPPPLSPPVTSTRRLPAPSATSPTCLSRP 597
>LOC_Os07g38290:12007.t03495:unspliced-genomic copper ion binding protein, putative, expressed| Length = 4989 Score = 31.3 bits (62), Expect = 7.7 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -2 / -3 Query: 701 HLNSITWSTTCSSNRTRDL 645 HL S TW +CSSN+T ++ Sbjct: 334 HLQSCTWQDSCSSNKTTNV 278
>LOC_Os07g33760:12007.t03054:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 3571 Score = 31.3 bits (62), Expect = 7.7 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 / -1 Query: 298 MPNCTSCTLATSAGEYGNLASISPPRRRRRHLGFGS 191 MP+CTSC Y + +P R R+ +LGF S Sbjct: 109 MPSCTSCLP*AHGSCYSAQPN*APSRSRK*YLGFAS 2
>LOC_Os07g05110:12007.t00395:unspliced-genomic nutrient reservoir, putative, expressed| Length = 1816 Score = 31.3 bits (62), Expect = 7.7 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -2 / -1 Query: 227 PTAAPAPPRVWVSDPAAHRERAAARS 150 P AAP PPR P A R R AR+ Sbjct: 229 PRAAPTPPRRGARPPGARRRRRRART 152
>LOC_Os06g47580:12006.t04444:unspliced-genomic REV1, putative, expressed| Length = 9444 Score = 31.3 bits (62), Expect = 7.7 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = -3 / +1 Query: 595 HPLNQTTRI*SIYCSVCYNGSASTYICQIKLGQFA 491 H + QT + I CS CYN + IC + F+ Sbjct: 4672 HTILQTKNMMCISCSTCYNSNEVLLICHVMAMSFS 4776
>LOC_Os04g33480:12004.t005542:unspliced-genomic histone deacetylase 1, putative, expressed| Length = 5736 Score = 31.3 bits (62), Expect = 7.7 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -2 / +1 Query: 245 PRVHFTPTAAPAPPRVWVSDPAAHRERAAA 156 PR+ P+A P PP V V AA RER+ A Sbjct: 115 PRLPSHPSAPPPPPLVVVGGRAAARERSDA 204
>LOC_Os03g56700:12003.t04929:unspliced-genomic expressed protein| Length = 1292 Score = 31.3 bits (62), Expect = 7.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 / +2 Query: 307 GLRMPNCTSCTLATSAGEYGNLASISPPRRRRRHLGFGSQI 185 G + +S A S+ G ++ISPP R+RR GSQ+ Sbjct: 587 GTSPSSSSSAPPAASSCSPGTCSAISPPNRKRRKEEIGSQL 709
>LOC_Os03g40070:12003.t03438:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3947 Score = 31.3 bits (62), Expect = 7.7 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = -2 / +3 Query: 218 APAPPRVWVSDPAAHRERAAARSLGGWAARTVTVWGT 108 AP PR W + R RA +R R + WGT Sbjct: 3468 APCRPRAWARPSSGTRWRATSRPCWSTPRRPASPWGT 3578
>LOC_Os02g51200:12002.t04704:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5897 Score = 31.3 bits (62), Expect = 7.7 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 / -3 Query: 298 MPNCTSCTLATSAGEYGNLASISPPRRRRRHLGFGS 191 MP+CTSC Y + +P R R+ +LGF S Sbjct: 3135 MPSCTSCLP*AHGSCYSAQPN*APSRSRK*YLGFAS 3028
>LOC_Os02g21240:12002.t01914:unspliced-genomic ubiquitin-protein ligase, putative, expressed| Length = 3769 Score = 31.3 bits (62), Expect = 7.7 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -2 / +3 Query: 236 HFTPTAAPAPPRVWVSDPAAHRERAAAR 153 H TPT +P PP+ P HR R R Sbjct: 36 HLTPTVSPPPPQSHKP*PPCHRRRRRRR 119
>LOC_Os02g02850:12002.t00185:unspliced-genomic C-1-tetrahydrofolate synthase, cytoplasmic, putative, expressed| Length = 3414 Score = 31.3 bits (62), Expect = 7.7 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -2 / +3 Query: 227 PTAAPAPPRVWVSDPAAHRERAAARS 150 P P PPR V P HR RAAA + Sbjct: 51 PPPPPRPPRAAVPLPPGHRRRAAAEA 128
>LOC_Os01g13080:12001.t01173:unspliced-genomic 60S acidic ribosomal protein P3, putative, expressed| Length = 1519 Score = 31.3 bits (62), Expect = 7.7 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 / -1 Query: 242 RVHFTPTAAPAPPRVWVSDPAAHRER 165 R+HF P+ P+ PR+W H++R Sbjct: 1204 RLHFLPSPLPSSPRLWGPRRQLHQQR 1127
>LOC_Os01g12440:12001.t01112:unspliced-genomic ap2 domain protein, putative, expressed| Length = 1833 Score = 31.3 bits (62), Expect = 7.7 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -2 / -1 Query: 245 PRVHFTPTAAPAPPRVWVSDPAAHRERAAARS 150 PR +P A P PPR PA +AARS Sbjct: 690 PRPSPSPAARPPPPRAVTESPARSASPSAARS 595
>LOC_Os01g10980:12001.t00971:unspliced-genomic nodulin-like protein, putative| Length = 1454 Score = 31.3 bits (62), Expect = 7.7 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +3 / +2 Query: 6 ALSPDPLSPPISRRRRGPVGSIPLE 80 AL P PP RRRRGP G PL+ Sbjct: 1214 ALRPRRGRPPRQRRRRGPHGGWPLQ 1288
>LOC_Os01g06030:12001.t00487:unspliced-genomic conserved hypothetical protein| Length = 877 Score = 31.3 bits (62), Expect = 7.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 / +2 Query: 227 PTAAPAPPRVWVSDPAAHRERAA 159 PT++PAPPR S P+ R R A Sbjct: 212 PTSSPAPPRTRCSAPSCSRRRPA 280
>LOC_Os06g44670:12006.t04154:unspliced-genomic hypothetical protein| Length = 665 Score = 24.9 bits (48), Expect(2) = 7.9 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -3 / -1 Query: 304 LRMPNCTSCTLATSAGEYGNLASISPPRRRRRH 206 L +P+ S + ATS+ L S RRRRRH Sbjct: 377 LPVPSPPSVSCATSSMRSRPLYSRRATRRRRRH 279 Score = 23.5 bits (45), Expect(2) = 7.9 Identities = 11/42 (26%), Positives = 17/42 (40%) Frame = -3 / -2 Query: 547 CYNGSASTYICQIKLGQFATQTTPHIELKLTTSNPMTVHPEL 422 C+ G T++C K +PH+ L + T P L Sbjct: 538 CFWGKKITHLCH*KKNGSIFSPSPHVFFTLAPPSRPTPPPPL 413
>LOC_Os03g52239:12003.t04550:unspliced-genomic homeodomain protein JUBEL1, putative, expressed| Length = 11147 Score = 24.9 bits (48), Expect(2) = 8.4 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -3 / -1 Query: 295 PNCTSCTLATSAGEYGNLASISPPRRRR 212 P+ + AT+ G L PPRRRR Sbjct: 1688 PSPAAAATATARGRAPGLPPRRPPRRRR 1605 Score = 23.1 bits (44), Expect(2) = 8.4 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = -2 / -3 Query: 221 AAPAPPRVW 195 AAPAPP W Sbjct: 1599 AAPAPPNAW 1573
>LOC_Os02g27530:12002.t02447:unspliced-genomic conserved hypothetical protein| Length = 2777 Score = 24.0 bits (46), Expect(2) = 9.5 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 7 HSLPIPFPLPFR 42 H LP+P PLP R Sbjct: 2049 HRLPVPSPLPRR 2014 Score = 24.0 bits (46), Expect(2) = 9.5 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +2 / -1 Query: 26 FPSHFAEKARTGRIDPTRARF*PPKSLACPRQ 121 FPS A + R+D A PP + AC R+ Sbjct: 2012 FPSRRAGRRCRRRVDCRLAMPGPPSARACTRE 1917
>LOC_Os01g36720:12001.t03220:unspliced-genomic nitrate transporter, putative| Length = 2200 Score = 24.9 bits (48), Expect(2) = 9.6 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -2 / -1 Query: 173 RERAAARSLGGWAAR 129 R RA S GGWAAR Sbjct: 238 RARAPGASPGGWAAR 194 Score = 23.1 bits (44), Expect(2) = 9.6 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = -3 / -2 Query: 271 ATSAGEYGNLASISPPRRRRRHLGFGSQ 188 A A E A PP +RRR G G + Sbjct: 339 AARAEEVAGGAHGEPPHQRRRERGHGGR 256 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 269,273,796 Number of extensions: 4174333 Number of successful extensions: 28509 Number of sequences better than 10.0: 69 Length of query: 243 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 194 Effective length of database: 52,856,264 Effective search space: 10254115216 Effective search space used: 10254115216 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)