ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6g10 |
|---|---|
| Clone Library Name | barley_pub |
>Q9NZW4:DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein| - Homo sapiens (Human) Length = 1253 Score = 41.6 bits (96), Expect = 0.023 Identities = 68/396 (17%), Positives = 142/396 (35%), Gaps = 4/396 (1%) Frame = +2 Query: 644 TDGSEITCAESNSSTPSVDMVDSCEGSTLSPKHVGDILFEESFSPSSSVKEASEKAPDSE 823 +D S+ + ++S+SS D DS S S + D S SS+ +S+ + S+ Sbjct: 614 SDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSD 673 Query: 824 NDNEYNGCXXXXXXXXXXXDETELSRPTTSGLELFGQCNSSDCRCLDDAPNCELMDSSQE 1003 + + + ++ S +++ E SSD D+ + + DSS Sbjct: 674 SSDSSSSSDSSSSSDSSNSSDSSDSSDSSNSSE------SSDSSDSSDSDSSDSSDSSNS 727 Query: 1004 LPYASRSGNCSDTAKTPFRNDCGH--DPCETAEFCSSGDGVDDXXXXXXXXXXXXXXXXX 1177 S S N SD++ + +D + D ++++ +S D D Sbjct: 728 NSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSND 787 Query: 1178 XXXXDFHLVISRKRARKERKMSMWKSFNGEHASAVAHGPNEKYTGRYSRQMIKEPNTKEW 1357 S + S S + + + + + ++ S ++ + Sbjct: 788 SSNSSDS---SDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDS 844 Query: 1358 SHRPDHVGSIQPQHEVALKRSIKNFTQRRSNEIPLKDFESGASHNHFTSPKENINSKPNG 1537 S D S + S + + SN D + N ++ ++ +S + Sbjct: 845 SDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSS 904 Query: 1538 DFD--EEQNIDLNKRLPNAVYCRESSSCEMLSNSGSEPTTSESAQDNCTSESGESTDHIV 1711 D D + N + N+ ESS+ SNS +S+S+ + +S S +S++ Sbjct: 905 DSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSGD 964 Query: 1712 GNFPMQKTGLQGSFQADDATGTGSGLPSPDPNSTQT 1819 + + S +D + + S S +S+ + Sbjct: 965 SSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDS 1000 Score = 34.7 bits (78), Expect = 2.8 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 2/154 (1%) Frame = +2 Query: 668 AESNSSTPSVDMVDSCEGSTLSPKHVGDILFEESFSPSSSVKEASEKAPDSENDNEYNGC 847 ++S+ S S + DS + S S D S SS+ ++SE + S+N N + Sbjct: 883 SDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSS 942 Query: 848 XXXXXXXXXXXDETELSRPTTSGLELFGQCNSSDCRCLDDAPNCELMDSSQELPYASRSG 1027 D + S + SG + +SSD D + + DSS +S S Sbjct: 943 NSSDSSDSS--DSSNSSDSSNSG-DSSNSSDSSDSNSSDSSDSSNSSDSSDSSD-SSDSS 998 Query: 1028 NCSDTAKTPFRNDC--GHDPCETAEFCSSGDGVD 1123 + SD++ + +D D +++ +S D D Sbjct: 999 DSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSD 1032
>Q9CX48:ZCH10_MOUSE Zinc finger CCHC domain-containing protein 10 - Mus musculus (Mouse)| Length = 178 Score = 38.1 bits (87), Expect = 0.25 Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 3/172 (1%) Frame = +2 Query: 1196 HLVISRKRARKERK-MSMWKSFNGEHASAVAHGPNEKYTGRYSRQMIKEPNTKEWSHRP- 1369 H +I+R++A ++ + K H + G KY R SR + KE +R Sbjct: 6 HRLIARRKAEANKQHVRCQKCLEFGHWTYECKG-KRKYLHRPSRTAELKKALKEKENRLL 64 Query: 1370 -DHVGSIQPQHEVALKRSIKNFTQRRSNEIPLKDFESGASHNHFTSPKENINSKPNGDFD 1546 +G + ++ K+ K+ T ++ S +S + +S E S + D D Sbjct: 65 LQSIGETNIEKKIKKKKRSKSVTSSSTSS-------SDSSASESSSESETSASSSSEDSD 117 Query: 1547 EEQNIDLNKRLPNAVYCRESSSCEMLSNSGSEPTTSESAQDNCTSESGESTD 1702 ++++ + ++ C SSS S+S ++S S+ + +SES + Sbjct: 118 SDESLSSSSSSSSSSACSSSSSSSSSSSSSDSDSSSSSSSSSSSSESSSDDE 169
>Q4FP37:ATPG_PELUB ATP synthase gamma chain - Pelagibacter ubique| Length = 291 Score = 37.7 bits (86), Expect = 0.33 Identities = 23/70 (32%), Positives = 37/70 (52%) Frame = +2 Query: 1499 TSPKENINSKPNGDFDEEQNIDLNKRLPNAVYCRESSSCEMLSNSGSEPTTSESAQDNCT 1678 TS E +S+ N +F+ +++ L+ LP + + + ML NS SE + SA DN T Sbjct: 198 TSEAEENSSEDNYEFEPDEDEILSNLLPKNISTQIFKA--MLENSASEQGSRMSAMDNAT 255 Query: 1679 SESGESTDHI 1708 +GE D + Sbjct: 256 RNAGEMVDKL 265
>P59808:SASH1_MOUSE SAM and SH3 domain-containing protein 1 - Mus musculus (Mouse)| Length = 1230 Score = 36.6 bits (83), Expect = 0.73 Identities = 27/91 (29%), Positives = 37/91 (40%) Frame = +2 Query: 155 D*CKMVTVHGFANGTSDGTANRKIKRLFNSSERKNPTNFQFERHVARLESRQQQQPRRCI 334 D K +H N T R K+L E K P+ E HV E+ Q R + Sbjct: 247 DSVKFKRLHKLVNST-----RRVRKKLIRVEEMKKPSAEGGEEHV--FENSPVQDERSAL 299 Query: 335 FTTILPIEFFHTSSEPTSPEDSLDSASSPPS 427 ++ + FF+ S PED DS + PS Sbjct: 300 YSGVHKKPFFYDGSPEKPPEDDADSLTPSPS 330
>Q5EB97:ZCH10_RAT Zinc finger CCHC domain-containing protein 10 - Rattus norvegicus| (Rat) Length = 173 Score = 36.2 bits (82), Expect = 0.95 Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 3/172 (1%) Frame = +2 Query: 1196 HLVISRKRARKERK-MSMWKSFNGEHASAVAHGPNEKYTGRYSRQMIKEPNTKEWSHR-- 1366 H +I+R++A ++ + K H + G KY R SR + KE +R Sbjct: 6 HRLIARRQAEANKQHVRCQKCLEFGHWTYECKG-KRKYLHRPSRTAELKKALKEKENRLL 64 Query: 1367 PDHVGSIQPQHEVALKRSIKNFTQRRSNEIPLKDFESGASHNHFTSPKENINSKPNGDFD 1546 +G + + KR K+ T S++ S AS S E+ S + D Sbjct: 65 QQSMGETNTERKTKKKRRPKSVTSTSSSD-------SSASE----SSSESETSASSSSED 113 Query: 1547 EEQNIDLNKRLPNAVYCRESSSCEMLSNSGSEPTTSESAQDNCTSESGESTD 1702 + + L+ ++ Y SSS S+S S+ +S S+ + +SES + Sbjct: 114 SDADGSLSSSSSSSAYSSSSSSSSSSSSSSSDSDSSSSSSSSSSSESSSDDE 165
>P42223:SBE2_YEAST Protein SBE2 - Saccharomyces cerevisiae (Baker's yeast)| Length = 864 Score = 35.4 bits (80), Expect = 1.6 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 19/126 (15%) Frame = +2 Query: 1373 HVGSIQPQHEVALKRSIKNFTQRRSNEIPLKDFESGASHNHFT--SPKENINSK---PNG 1537 H+ QP+ + + +T+R+S +PL SG+S + T S +NI ++ N Sbjct: 26 HLKQNQPKKFSTKELMLSEYTERKSCSLPLSKSRSGSSASSSTTGSNGKNIGTRRPSSNL 85 Query: 1538 DF-----DEEQNI--DLNKRLPNAVYCRE-------SSSCEMLSNSGSEPTTSESAQDNC 1675 DF D +N+ + N +P A R +SS E+ S+S S T+ + Sbjct: 86 DFNFASQDVVKNVLGNNNPHVPTAKCIRPISDDSIGTSSTEIFSSSHSNTTSDSLCTSDI 145 Query: 1676 TSESGE 1693 +SE GE Sbjct: 146 SSEEGE 151
>P14164:BAF1_YEAST Transcription factor BAF1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 731 Score = 35.4 bits (80), Expect = 1.6 Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%) Frame = +2 Query: 1382 SIQPQHEVALKRSIKNFTQRRSNEIPLKDFESGASH-----NHFTSPKENINSKPNGDFD 1546 +I Q V +K ++ + +++ D ESG +H NH + +++++++ ++ Sbjct: 176 NIFKQQGVTIKNDTEDDSINKASIDRGLDDESGPTHGNDSGNHRHNEEDDVHTQMTKNYS 235 Query: 1547 EEQNI-DLNKRLPNAVYCRESSSCEMLSNSGSEPTTSESAQDNCTSESGESTDHIVGNFP 1723 + N D+N + NAV +S S + T + QDN T+ + + + + N Sbjct: 236 DVVNDEDINVAIANAVANVDSQSNNKHDGKDDDATNNNDGQDN-TNNNDHNNNSNINNNN 294 Query: 1724 MQKTGLQGSFQADDATGTGSGLPSPDPNSTQTDSVIG----CGLTPF----LEGNHRLGK 1879 + G+ S T L D ++ TD + G + P+ LE N LGK Sbjct: 295 VGSHGI-SSHSPSSIRDTSMNL---DVFNSATDDIPGPFVVTKIEPYHSHPLEDNLSLGK 350 Query: 1880 FSSSEMHLIEMIKVVNDAYEVQVAADAYMSAGYPITDLETFLY 2008 F +++ I + ND Q+ +Y ++ + ++ + Y Sbjct: 351 FILTKIPKI----LQNDLKFDQILESSYNNSNHTVSKFKVSHY 389
>P46591:HYR1_CANAL Hyphally-regulated protein precursor - Candida albicans (Yeast)| Length = 937 Score = 35.0 bits (79), Expect = 2.1 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +2 Query: 1625 SNSGSEPTTSESAQDNCTSESGESTDHIVGNFPMQKTGLQGSFQADDATGTGSGLPSPDP 1804 + SGS + A + S G TD I G K G D AT TG+ + +P Sbjct: 795 AGSGSGSESGSKAGSHSGSNEGAKTDSIEGFHTESKPGFNTGAHTD-ATVTGNSVANPVT 853 Query: 1805 NSTQTDSVIG--CGLTPFLEG 1861 ST++D+ I +T ++ G Sbjct: 854 TSTESDTTISVTVSITSYMTG 874
>Q8TGE1:AWA1_YEAST Cell wall protein AWA1 precursor - Saccharomyces cerevisiae (Baker's| yeast) Length = 1713 Score = 35.0 bits (79), Expect = 2.1 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 4/144 (2%) Frame = +2 Query: 1472 ESGASHNHFTSPKENINSKPNGDFDEEQNIDLN---KRLPNAVYCRESSSCEMLSNSGSE 1642 ESG+S + TS E+ +S E ++ + SS ++ SGS Sbjct: 435 ESGSSVSGSTSATESGSSASGSSSATESGSSVSGSTSATESGSASSVPSSSGSVTESGSS 494 Query: 1643 PTTSESAQDNCTSESGESTDHIVGNFPMQKTGLQGSFQADDATGTGSGLP-SPDPNSTQT 1819 + SES+ + SG S G+ + + GS A A G S +P S ST + Sbjct: 495 SSASESSITQSGTASGSSVSSTSGSVTQSGSSVSGS-SASSAPGISSSIPQSTSSASTAS 553 Query: 1820 DSVIGCGLTPFLEGNHRLGKFSSS 1891 S+ LT G+ + SS Sbjct: 554 GSITSGTLTSITSGSSSATESGSS 577 Score = 34.7 bits (78), Expect = 2.8 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Frame = +2 Query: 1607 SSCEMLSNSGSEPTTSESAQDNCTSESGESTDHIVGNFPMQKTGLQGSFQADDATGTGSG 1786 SS ++ SGS + SES+ + SG S G+ + + GS A A G S Sbjct: 673 SSSGSVTESGSSSSASESSITQSGTASGSSASSTSGSVTQSGSSVSGS-SASSAPGISSS 731 Query: 1787 LP-SPDPNSTQTDSVIGCGLTPFLEGNHRLGKFSSS 1891 +P S ST + S+ LT G+ + SS Sbjct: 732 IPQSTSSASTASGSITSGTLTSITSGSSSATESGSS 767
>P54679:PMA1_DICDI Probable plasma membrane ATPase - Dictyostelium discoideum (Slime| mold) Length = 1058 Score = 34.3 bits (77), Expect = 3.6 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%) Frame = +2 Query: 1445 SNEIPLKDFESGASHNHFTSPKENINSKPNGDFDEEQNIDLNKRLPNAVYCRESSSCEML 1624 +N+IP ES A ++ +SPK N++S + ++ L ++L +E ++ Sbjct: 3 NNQIPKNSPESSAINSAESSPKSNVSSDVLHENHHKEQQQLQQQLQ-----QEQQQQQLP 57 Query: 1625 SNSGSEPT--------------TSESAQDNCTSESGESTDHIVGNFPMQKTGLQGS 1750 + SEPT +E++ N S+ GES+ + +P K GS Sbjct: 58 TTPQSEPTQRVNNNEEGIEMDRIAENSNINVPSDVGESSLKTISGYPSSKNTEAGS 113
>P39806:SALM_DROVI Homeotic protein spalt-major - Drosophila virilis (Fruit fly)| Length = 1402 Score = 33.9 bits (76), Expect = 4.7 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 4/137 (2%) Frame = +2 Query: 1271 ASAVAHGPNEKYTGRYSRQMIKEPNTKEWSHRPDHVGSIQPQHEVALKRSIKNFTQRRSN 1450 A+A A N R +Q ++ E + V + Q E + I+N Sbjct: 57 ANASASAGNSPCPSRSPQQHSEDEREPEQVSEQELVPEVSAQSESEIGEEIENNAD---- 112 Query: 1451 EIPLKDFESGASHNHFTSPKEN-INSKPNGDFDEEQNIDLNKRLPNAVYCRESSSC---E 1618 E+ A HNH + + +KP + + EQN +LN +PN+ +++ Sbjct: 113 -------ETNADHNHNNNNNNKLVMTKPPVEHEVEQNANLNASMPNSTTPPATNAVIAGA 165 Query: 1619 MLSNSGSEPTTSESAQD 1669 G+ P T E+ Q+ Sbjct: 166 RAQQFGATPVTLEAIQN 182
>P12027:PSGP_ONCMY Polysialoglycoprotein precursor - Oncorhynchus mykiss (Rainbow trout)| (Salmo gairdneri) Length = 542 Score = 33.9 bits (76), Expect = 4.7 Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 13/153 (8%) Frame = +2 Query: 1397 HEVALKRSI-KNFTQRRSNEIPLKDFESGASHNHFTSPKENINSKPNGDFDEEQNIDLNK 1573 H +AL RSI + Q R + + ES AS NH +SP N E+ + Sbjct: 53 HALALLRSIGSDAKQAREEYLETNEVESQASPNHGSSP-------ANDALSSEEKL---- 101 Query: 1574 RLPNAVYCRESSSCEMLSNSGSEPTTSESAQ----DNCTSE--SGESTDHIVGNFPMQKT 1735 V ++++ E + + TSE+A D+ TSE +G S D + Sbjct: 102 ---RRVSSDDAATSEAATGPSGDDATSEAATGPSGDDATSEAATGPSGDDATSEAATGPS 158 Query: 1736 GLQGSFQA------DDATGTGSGLPSPDPNSTQ 1816 G + +A DDAT + PS D +++ Sbjct: 159 GDDATSEAATGPSGDDATSEAATGPSGDDATSE 191
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 33.1 bits (74), Expect = 8.0 Identities = 41/207 (19%), Positives = 85/207 (41%) Frame = +2 Query: 1205 ISRKRARKERKMSMWKSFNGEHASAVAHGPNEKYTGRYSRQMIKEPNTKEWSHRPDHVGS 1384 I+++ A++ K S + + + A + + S + K+ KE S S Sbjct: 32 ITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESES 91 Query: 1385 IQPQHEVALKRSIKNFTQRRSNEIPLKDFESGASHNHFTSPKENINSKPNGDFDEEQNID 1564 + E + S + ++ S+ ES T K+ +S+ + + E+ + Sbjct: 92 SSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEE 151 Query: 1565 LNKRLPNAVYCRESSSCEMLSNSGSEPTTSESAQDNCTSESGESTDHIVGNFPMQKTGLQ 1744 ++ +ESSS +S SE ++SES ++ +SES E + +V +K G Sbjct: 152 AVVKIEEK---KESSS-----DSSSESSSSESESESSSSES-EEEEEVVEKTEEKKEGSS 202 Query: 1745 GSFQADDATGTGSGLPSPDPNSTQTDS 1825 S +++ S +S+ ++S Sbjct: 203 ESSSDSESSSDSSSESGDSDSSSDSES 229 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 592,831,353 Number of extensions: 12975211 Number of successful extensions: 36638 Number of sequences better than 10.0: 13 Number of HSP's gapped: 36527 Number of HSP's successfully gapped: 17 Length of query: 1132 Length of database: 100,686,439 Length adjustment: 124 Effective length of query: 1008 Effective length of database: 66,673,859 Effective search space: 67207249872 Effective search space used: 67207249872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
