ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6f07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102197:Os04g0558400 | 764 | 0.0 | 2 | AK061440:Os04g0558400 | 764 | 0.0 | 3 | AK061940:Os04g0558400 | 667 | 0.0 | 4 | AK073841:Os04g0443700 | 38 | 0.019 | 5 | AK105170:Os04g0643600 | 34 | 0.27 | 6 | Os01g0782700:Os01g0782700 | 32 | 1.8 | 7 | AK067626:Os03g0758300 | 31 | 3.0 | 8 | AK060339:Os03g0758300 | 31 | 3.0 | 9 | Os07g0462000:Os07g0462000 | 30 | 6.7 | 10 | Os05g0502000:Os05g0502000 | 30 | 6.7 | 11 | AK103315:Os05g0129000 | 30 | 6.7 | 12 | AK058241:Os05g0129000 | 30 | 6.7 | 13 | AJ508916:Os05g0129000 | 30 | 6.7 | 14 | AK105748:Os05g0115800 | 29 | 8.7 | 15 | AK067768:Os05g0115800 | 29 | 8.7 | 16 | Os11g0134100:Os11g0134100 | 29 | 8.7 | 17 | Os06g0193200:Os06g0193200 | 29 | 8.7 | 18 | AK120838:Os10g0533000 | 29 | 8.7 | 19 | AK111576:Os10g0533000 | 29 | 8.7 | 20 | AK069229:Os03g0646300 | 29 | 8.7 |
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>AK102197:Os04g0558400 | Length = 428 Score = 764 bits (1974), Expect = 0.0 Identities = 375/428 (87%), Positives = 397/428 (92%), Gaps = 3/428 (0%) Frame = +1 Query: 127 MDREEVTEFLGQVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQA 306 MDREEVTEFLGQVPLLQCLP SSIRRIA+AV VK YEP YVAREG+PVDGL IILDGQA Sbjct: 1 MDREEVTEFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAREGDPVDGLYIILDGQA 60 Query: 307 EVSAPANTEEANRPDYVLNKYDYFGYGTNSSVHQVNVIAVTKLSCFVLPSQYGHLLQTKT 486 EVSAPANTEE NRPDYVLNKYDYFGYGTNSSVHQVNVIAV+KL+CFVLP+QYGHLLQ KT Sbjct: 61 EVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSKLTCFVLPNQYGHLLQPKT 120 Query: 487 IWNAEETPESHSLMEQILHLEKLEVDIFRGFTLPEAPTFRQVFXXXXXXXXXXXXSKTVD 666 IW+AEETPE+HSL+EQILHLE LEVDIFRGFTLP APTFRQVF SKTVD Sbjct: 121 IWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFRQVFGGQLIGQALAAASKTVD 180 Query: 667 CLKLVHSLHAIFLIAGDNDMPIIYQVHRERDGTSFATRKVEAKQKGLVMFTLIVSFQKEE 846 CLK VHSLHAIFLIAGD ++PIIYQVHR RDGTSFATRKVEAKQKGLV+FTLI SFQK+E Sbjct: 181 CLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATRKVEAKQKGLVIFTLIASFQKDE 240 Query: 847 IGFEHQAAIMPVVPPPEQLLNMEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFCQD 1026 +GFEHQAAIMP VPPPE+LLN+EEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFC+D Sbjct: 241 LGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFCED 300 Query: 1027 SKSQHEPSLHYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHRERGLKTYSLSLDH 1206 S SQH+PSL+YWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHRE+GLKTYSLSLDH Sbjct: 301 SASQHKPSLNYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHREKGLKTYSLSLDH 360 Query: 1207 SMWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELIVSLTQEALIRRAKTPG-- 1380 S+WFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGEL++SLTQEALIRRAKTPG Sbjct: 361 SIWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELVMSLTQEALIRRAKTPGQP 420 Query: 1381 -QTPRPKL 1401 QTPRPKL Sbjct: 421 SQTPRPKL 428
>AK061440:Os04g0558400 | Length = 428 Score = 764 bits (1974), Expect = 0.0 Identities = 375/428 (87%), Positives = 397/428 (92%), Gaps = 3/428 (0%) Frame = +1 Query: 127 MDREEVTEFLGQVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQA 306 MDREEVTEFLGQVPLLQCLP SSIRRIA+AV VK YEP YVAREG+PVDGL IILDGQA Sbjct: 1 MDREEVTEFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAREGDPVDGLYIILDGQA 60 Query: 307 EVSAPANTEEANRPDYVLNKYDYFGYGTNSSVHQVNVIAVTKLSCFVLPSQYGHLLQTKT 486 EVSAPANTEE NRPDYVLNKYDYFGYGTNSSVHQVNVIAV+KL+CFVLP+QYGHLLQ KT Sbjct: 61 EVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSKLTCFVLPNQYGHLLQPKT 120 Query: 487 IWNAEETPESHSLMEQILHLEKLEVDIFRGFTLPEAPTFRQVFXXXXXXXXXXXXSKTVD 666 IW+AEETPE+HSL+EQILHLE LEVDIFRGFTLP APTFRQVF SKTVD Sbjct: 121 IWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFRQVFGGQLIGQALAAASKTVD 180 Query: 667 CLKLVHSLHAIFLIAGDNDMPIIYQVHRERDGTSFATRKVEAKQKGLVMFTLIVSFQKEE 846 CLK VHSLHAIFLIAGD ++PIIYQVHR RDGTSFATRKVEAKQKGLV+FTLI SFQK+E Sbjct: 181 CLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATRKVEAKQKGLVIFTLIASFQKDE 240 Query: 847 IGFEHQAAIMPVVPPPEQLLNMEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFCQD 1026 +GFEHQAAIMP VPPPE+LLN+EEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFC+D Sbjct: 241 LGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFCED 300 Query: 1027 SKSQHEPSLHYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHRERGLKTYSLSLDH 1206 S SQH+PSL+YWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHRE+GLKTYSLSLDH Sbjct: 301 SASQHKPSLNYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHREKGLKTYSLSLDH 360 Query: 1207 SMWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELIVSLTQEALIRRAKTPG-- 1380 S+WFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGEL++SLTQEALIRRAKTPG Sbjct: 361 SIWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELVMSLTQEALIRRAKTPGQP 420 Query: 1381 -QTPRPKL 1401 QTPRPKL Sbjct: 421 SQTPRPKL 428
>AK061940:Os04g0558400 | Length = 370 Score = 667 bits (1722), Expect = 0.0 Identities = 325/370 (87%), Positives = 345/370 (93%), Gaps = 3/370 (0%) Frame = +1 Query: 301 QAEVSAPANTEEANRPDYVLNKYDYFGYGTNSSVHQVNVIAVTKLSCFVLPSQYGHLLQT 480 QAEVSAPANTEE NRPDYVLNKYDYFGYGTNSSVHQVNVIAV+KL+CFVLP+QYGHLLQ Sbjct: 1 QAEVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSKLTCFVLPNQYGHLLQP 60 Query: 481 KTIWNAEETPESHSLMEQILHLEKLEVDIFRGFTLPEAPTFRQVFXXXXXXXXXXXXSKT 660 KTIW+AEETPE+HSL+EQILHLE LEVDIFRGFTLP APTFRQVF SKT Sbjct: 61 KTIWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFRQVFGGQLIGQALAAASKT 120 Query: 661 VDCLKLVHSLHAIFLIAGDNDMPIIYQVHRERDGTSFATRKVEAKQKGLVMFTLIVSFQK 840 VDCLK VHSLHAIFLIAGD ++PIIYQVHR RDGTSFATRKVEAKQKGLV+FTLI SFQK Sbjct: 121 VDCLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATRKVEAKQKGLVIFTLIASFQK 180 Query: 841 EEIGFEHQAAIMPVVPPPEQLLNMEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFC 1020 +E+GFEHQAAIMP VPPPE+LLN+EEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFC Sbjct: 181 DELGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFPMQYRNSAAKKKFVPWPIEMRFC 240 Query: 1021 QDSKSQHEPSLHYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHRERGLKTYSLSL 1200 +DS SQH+PSL+YWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHRE+GLKTYSLSL Sbjct: 241 EDSASQHKPSLNYWFRARGKLSDDPALHRCVVAYASDLLYSGVSLNPHREKGLKTYSLSL 300 Query: 1201 DHSMWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELIVSLTQEALIRRAKTPG 1380 DHS+WFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGEL++SLTQEALIRRAKTPG Sbjct: 301 DHSIWFHKPVKADDWLLYVIDSPSAHGGRGFVTGRMFNRQGELVMSLTQEALIRRAKTPG 360 Query: 1381 ---QTPRPKL 1401 QTPRPKL Sbjct: 361 QPSQTPRPKL 370
>AK073841:Os04g0443700 | Length = 421 Score = 38.1 bits (87), Expect = 0.019 Identities = 23/73 (31%), Positives = 34/73 (46%) Frame = -1 Query: 489 NCLCLQQMSVLTWQYKAGQLCYRNNIYLMYRTIGPITKVVILI*HIVWTVCFFCVCRSRN 310 +CLC S W+ + G L + I IG +T V+I I I+ + C+C S N Sbjct: 82 SCLCFDDKSENAWKSRVGVLYVMHPITFFTNIIGVVTIVLISIVSILGLI---CLCHSLN 138 Query: 309 FSLPIQYDAKTIY 271 F L I+ + Y Sbjct: 139 FQLLIKRRRRNYY 151
>AK105170:Os04g0643600 | Length = 252 Score = 34.3 bits (77), Expect = 0.27 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 160 QVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQAE 309 +VPL + + + I E ++ Y ++Y+ REG+PVD + IL G E Sbjct: 26 RVPLFENMDERLLDAICERLRPTLYTENEYILREGDPVDEMHFILHGCLE 75
>Os01g0782700:Os01g0782700 | Length = 287 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/61 (26%), Positives = 29/61 (47%) Frame = +1 Query: 148 EFLGQVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQAEVSAPAN 327 + + QVPL Q + + I + V+ + + + REG+PV + I+ G + S Sbjct: 82 DLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVLR 141 Query: 328 T 330 T Sbjct: 142 T 142
>AK067626:Os03g0758300 | Length = 618 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/58 (25%), Positives = 28/58 (48%) Frame = +1 Query: 148 EFLGQVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQAEVSAP 321 E + QVPL + + I + ++ + + V REG+PV + +L G+ + P Sbjct: 418 ELVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDPVQRMVFVLQGKLRSTQP 475
>AK060339:Os03g0758300 | Length = 449 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/58 (25%), Positives = 28/58 (48%) Frame = +1 Query: 148 EFLGQVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQAEVSAP 321 E + QVPL + + I + ++ + + V REG+PV + +L G+ + P Sbjct: 249 ELVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDPVQRMVFVLQGKLRSTQP 306
>Os07g0462000:Os07g0462000 | Length = 558 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = +1 Query: 841 EEIGF--EHQAAIMPVVPPPEQLLNMEEIRERRLTDPRF 951 +E+GF E A I V P E+LLN+ E + +R DP F Sbjct: 515 KEVGFLREVDAVISSGVTPAERLLNLYETKWQRSVDPVF 553
>Os05g0502000:Os05g0502000 | Length = 691 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +1 Query: 148 EFLGQVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQAEVS 315 + + QVPL + + I + V+ + + + REG+PV + I+ G + S Sbjct: 488 DLVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGDPVQRMLFIVRGHLQCS 543
>AK103315:Os05g0129000 | Length = 492 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = +1 Query: 841 EEIGF--EHQAAIMPVVPPPEQLLNMEEIRERRLTDPRF 951 +E+GF E A I V P E+LLN+ E + +R DP F Sbjct: 449 KEVGFLREVDAVISSGVTPAERLLNLYETKWQRSVDPVF 487
>AK058241:Os05g0129000 | Length = 87 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = +1 Query: 841 EEIGF--EHQAAIMPVVPPPEQLLNMEEIRERRLTDPRF 951 +E+GF E A I V P E+LLN+ E + +R DP F Sbjct: 44 KEVGFLREVDAVISSGVTPAERLLNLYETKWQRSVDPVF 82
>AJ508916:Os05g0129000 | Length = 492 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = +1 Query: 841 EEIGF--EHQAAIMPVVPPPEQLLNMEEIRERRLTDPRF 951 +E+GF E A I V P E+LLN+ E + +R DP F Sbjct: 449 KEVGFLREVDAVISSGVTPAERLLNLYETKWQRSVDPVF 487
>AK105748:Os05g0115800 | Length = 466 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -2 Query: 1151 LTPEYSRSEAYATTHLCRAGSSESFPLALNQ*CRLGSC*DLESWQNLI 1008 +TPE SRSEA T H+ G ES C D WQ ++ Sbjct: 397 VTPEDSRSEAVKTVHIWVGGEYES-----------SKCVDTVDWQQVV 433
>AK067768:Os05g0115800 | Length = 164 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -2 Query: 1151 LTPEYSRSEAYATTHLCRAGSSESFPLALNQ*CRLGSC*DLESWQNLI 1008 +TPE SRSEA T H+ G ES C D WQ ++ Sbjct: 95 VTPEDSRSEAVKTVHIWVGGEYES-----------SKCVDTVDWQQVV 131
>Os11g0134100:Os11g0134100 | Length = 1877 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Frame = +1 Query: 1204 HSMWFHKPVKAD----DWLLYVIDSPSAH--GGRGFVTGRMF 1311 HS+W V+A+ W +SP H G RG VTGR+F Sbjct: 1536 HSLWVDAKVQAEVEARKWPYSFPESPDFHKAGQRGSVTGRLF 1577
>Os06g0193200:Os06g0193200 | Length = 585 Score = 29.3 bits (64), Expect = 8.7 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +1 Query: 1066 RARGKLSDDP--ALHRCVVAYASDLLYSGVSLNPHRERGLKTYSLSLDHSMWFHKPVKAD 1239 +ARG ++D ++H C V + +LL SGVS R + Y+ ++ + V Sbjct: 453 QARGDPNEDTGFSVHNCTVVASPELLASGVSTRTFLGRPWRPYARAVVMDSYLGPLVDRA 512 Query: 1240 DWLLYVIDSPSAHGGR 1287 W ++ P A GR Sbjct: 513 GW----VEWPGAEPGR 524
>AK120838:Os10g0533000 | Length = 650 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 1401 KLRPWGLPRCLGSPNQRLLGQRHDELSLPVEHTSGDES 1288 +LRPW L CLGSP++ EL L + H + + Sbjct: 84 RLRPWQLILCLGSPDRAADAAVAAELGLRLVHVDANRA 121
>AK111576:Os10g0533000 | Length = 650 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 1401 KLRPWGLPRCLGSPNQRLLGQRHDELSLPVEHTSGDES 1288 +LRPW L CLGSP++ EL L + H + + Sbjct: 84 RLRPWQLILCLGSPDRAADAAVAAELGLRLVHVDANRA 121
>AK069229:Os03g0646300 | Length = 696 Score = 29.3 bits (64), Expect = 8.7 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +1 Query: 160 QVPLLQCLPGSSIRRIAEAVQVKHYEPSDYVAREGEPVDGLCIILDGQAE 309 +VPL + + I E ++ Y ++ REG+PVD + I+ G E Sbjct: 486 RVPLFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLE 535 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 48,938,937 Number of extensions: 1123237 Number of successful extensions: 2939 Number of sequences better than 10.0: 20 Number of HSP's gapped: 2935 Number of HSP's successfully gapped: 20 Length of query: 558 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 452 Effective length of database: 11,155,509 Effective search space: 5042290068 Effective search space used: 5042290068 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
