ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060068.1| Oryza sativa (japonica cultivar-group) Os04g0558400 (Os04g0558400) mRNA, complete cds Length = 1691 Score = 1257 bits (634), Expect = 0.0 Identities = 1102/1258 (87%) Strand = Plus / Plus Query: 116 cgcctccgccgatggaccgggaagaagtgacggagttcctgggccaggtgcccctcctgc 175 |||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129 cgccgccgcagatggatcgggaagaagtgacggagttcctcggccaggtgcccctcctgc 188 Query: 176 agtgcctccccggctcctccatccgcaggatcgccgaggccgtccaggtcaagcactacg 235 ||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||| ||||| Sbjct: 189 agtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacg 248 Query: 236 aacccagtgattatgttgctcgtgaaggtgaaccagtagatggtctttgcatcatactgg 295 |||| ||| ||| ||||||||||||||||| || |||||||| |||| ||||||| ||| Sbjct: 249 aacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattgg 308 Query: 296 atgggcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagactatg 355 ||||||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||| Sbjct: 309 atgggcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatg 368 Query: 356 tgttaaataagtatgactactttggttatgggaccaatagttctgtacatcaagtaaatg 415 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 369 tgttaaataagtatgactactttggttatggaaccaatagttctgtgcatcaagtaaatg 428 Query: 416 ttattgcggtaacaaagctgtcctgctttgtattgccaagtcaatacggacatctgctgc 475 ||||||| ||| |||||||| ||||||| |||||||||| |||||| ||||| || ||| Sbjct: 429 ttattgcagtatcaaagctgacctgcttcgtattgccaaatcaatatggacacttgttgc 488 Query: 476 aaacaaagacaatttggaatgcagaagaaacacctgaaagccattcattgatggaacaaa 535 || ||||||| ||||||| ||||||||| |||||||| | |||||| ||| | ||||||| Sbjct: 489 aaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaa 548 Query: 536 ttttacatctggagaaattagaggttgatatctttcgtggatttactttgccagaagctc 595 |||| || | ||| ||| ||||| |||||||| ||||| ||||||||||||| ||||| Sbjct: 549 ttttgcacttagagccattggaggtcgatatcttccgtgggtttactttgccaggagctc 608 Query: 596 caacttttaggcaagtttttggaggacaattgattgggcaggcactagcagcagcatcca 655 | |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 609 cgacttttaggcaagtttttggaggacagttgataggacaggcactagcagcagcatcca 668 Query: 656 agactgtcgattgcttgaaacttgtgcatagtctgcatgcaatttttctaatagcaggag 715 |||| || || ||| | ||| ||||| ||| |||| |||||||| || || ||||||| Sbjct: 669 agaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggag 728 Query: 716 ataatgatatgccaataatatatcaagtacatcgggagcgtgatggaaccagctttgcca 775 | || || |||||||||||||||| || ||||||| ||| |||||||| |||||||||| Sbjct: 729 acaagaatttgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgcca 788 Query: 776 ccagaaaagtggaggcaaagcagaaaggccttgttatgttcactttaattgtttctttcc 835 |||||||||||||||||||||| || |||||||| || ||||| || |||| ||| |||| Sbjct: 789 ccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattcc 848 Query: 836 agaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctccag 895 |||| || ||| ||||||| |||||||| |||||||||||||| | |||||||||||||| Sbjct: 849 agaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccag 908 Query: 896 aacagctgttgaatatggaggagatacgagaaagaagactcactgatccacgatttccga 955 || |||| ||||| |||| |||||||| ||||||||||| |||||||| || || || | Sbjct: 909 aagagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaa 968 Query: 956 tgcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggt 1015 |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 969 tgcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggt 1028 Query: 1016 tctgccaagattctaaatctcaacatgaaccaagcctgcattattggtttagagctagag 1075 | || ||||||| |||||||||| |||||||| | |||||||||||||||| |||| Sbjct: 1029 tttgtgaagattcagcatctcaacataaaccaagcttaaattattggtttagagccagag 1088 Query: 1076 gaaaactttcagatgatccagctctgcatagatgcgtcgtagcatatgcttcagatctac 1135 |||||||||| ||||||||||| |||||||| || || |||||||||||||| ||||||| Sbjct: 1089 gaaaactttctgatgatccagcactgcataggtgtgttgtagcatatgcttcggatctac 1148 Query: 1136 tatattcgggcgtcagcctaaatccacaccgggagaggggtttgaagacatactctctca 1195 ||||||| || |||||||||||||| || |||||| |||| ||||||||||||| |||| Sbjct: 1149 tatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcactca 1208 Query: 1196 gtcttgatcactcgatgtggttccacaagcctgtcaaagctgatgactggttgttatatg 1255 |||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||| Sbjct: 1209 gtcttgatcactcgatttggttccacaagcctgtgaaagctgatgattggcttttatatg 1268 Query: 1256 tgatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttcaacc 1315 |||||||||||||||| ||||||||||| |||| || || || || || |||||||||| Sbjct: 1269 tgatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaacc 1328 Query: 1316 ggcaaggagagctcatcgtgtcgctgacccaagaggcgttgattaggagagccaagac 1373 | |||||||||||| || ||||| |||||||||||||| |||||||||| || ||||| Sbjct: 1329 gacaaggagagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagac 1386 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 1403 caaaccccaaggccaaagctttgagaggtgcagaagagc 1441
>dbj|AK102197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087D05, full insert sequence Length = 1690 Score = 1257 bits (634), Expect = 0.0 Identities = 1102/1258 (87%) Strand = Plus / Plus Query: 116 cgcctccgccgatggaccgggaagaagtgacggagttcctgggccaggtgcccctcctgc 175 |||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 133 cgccgccgcagatggatcgggaagaagtgacggagttcctcggccaggtgcccctcctgc 192 Query: 176 agtgcctccccggctcctccatccgcaggatcgccgaggccgtccaggtcaagcactacg 235 ||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||| ||||| Sbjct: 193 agtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacg 252 Query: 236 aacccagtgattatgttgctcgtgaaggtgaaccagtagatggtctttgcatcatactgg 295 |||| ||| ||| ||||||||||||||||| || |||||||| |||| ||||||| ||| Sbjct: 253 aacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattgg 312 Query: 296 atgggcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagactatg 355 ||||||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||| Sbjct: 313 atgggcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatg 372 Query: 356 tgttaaataagtatgactactttggttatgggaccaatagttctgtacatcaagtaaatg 415 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 373 tgttaaataagtatgactactttggttatggaaccaatagttctgtgcatcaagtaaatg 432 Query: 416 ttattgcggtaacaaagctgtcctgctttgtattgccaagtcaatacggacatctgctgc 475 ||||||| ||| |||||||| ||||||| |||||||||| |||||| ||||| || ||| Sbjct: 433 ttattgcagtatcaaagctgacctgcttcgtattgccaaatcaatatggacacttgttgc 492 Query: 476 aaacaaagacaatttggaatgcagaagaaacacctgaaagccattcattgatggaacaaa 535 || ||||||| ||||||| ||||||||| |||||||| | |||||| ||| | ||||||| Sbjct: 493 aaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaa 552 Query: 536 ttttacatctggagaaattagaggttgatatctttcgtggatttactttgccagaagctc 595 |||| || | ||| ||| ||||| |||||||| ||||| ||||||||||||| ||||| Sbjct: 553 ttttgcacttagagccattggaggtcgatatcttccgtgggtttactttgccaggagctc 612 Query: 596 caacttttaggcaagtttttggaggacaattgattgggcaggcactagcagcagcatcca 655 | |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 613 cgacttttaggcaagtttttggaggacagttgataggacaggcactagcagcagcatcca 672 Query: 656 agactgtcgattgcttgaaacttgtgcatagtctgcatgcaatttttctaatagcaggag 715 |||| || || ||| | ||| ||||| ||| |||| |||||||| || || ||||||| Sbjct: 673 agaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggag 732 Query: 716 ataatgatatgccaataatatatcaagtacatcgggagcgtgatggaaccagctttgcca 775 | || || |||||||||||||||| || ||||||| ||| |||||||| |||||||||| Sbjct: 733 acaagaatttgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgcca 792 Query: 776 ccagaaaagtggaggcaaagcagaaaggccttgttatgttcactttaattgtttctttcc 835 |||||||||||||||||||||| || |||||||| || ||||| || |||| ||| |||| Sbjct: 793 ccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattcc 852 Query: 836 agaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctccag 895 |||| || ||| ||||||| |||||||| |||||||||||||| | |||||||||||||| Sbjct: 853 agaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccag 912 Query: 896 aacagctgttgaatatggaggagatacgagaaagaagactcactgatccacgatttccga 955 || |||| ||||| |||| |||||||| ||||||||||| |||||||| || || || | Sbjct: 913 aagagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaa 972 Query: 956 tgcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggt 1015 |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 973 tgcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggt 1032 Query: 1016 tctgccaagattctaaatctcaacatgaaccaagcctgcattattggtttagagctagag 1075 | || ||||||| |||||||||| |||||||| | |||||||||||||||| |||| Sbjct: 1033 tttgtgaagattcagcatctcaacataaaccaagcttaaattattggtttagagccagag 1092 Query: 1076 gaaaactttcagatgatccagctctgcatagatgcgtcgtagcatatgcttcagatctac 1135 |||||||||| ||||||||||| |||||||| || || |||||||||||||| ||||||| Sbjct: 1093 gaaaactttctgatgatccagcactgcataggtgtgttgtagcatatgcttcggatctac 1152 Query: 1136 tatattcgggcgtcagcctaaatccacaccgggagaggggtttgaagacatactctctca 1195 ||||||| || |||||||||||||| || |||||| |||| ||||||||||||| |||| Sbjct: 1153 tatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcactca 1212 Query: 1196 gtcttgatcactcgatgtggttccacaagcctgtcaaagctgatgactggttgttatatg 1255 |||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||| Sbjct: 1213 gtcttgatcactcgatttggttccacaagcctgtgaaagctgatgattggcttttatatg 1272 Query: 1256 tgatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttcaacc 1315 |||||||||||||||| ||||||||||| |||| || || || || || |||||||||| Sbjct: 1273 tgatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaacc 1332 Query: 1316 ggcaaggagagctcatcgtgtcgctgacccaagaggcgttgattaggagagccaagac 1373 | |||||||||||| || ||||| |||||||||||||| |||||||||| || ||||| Sbjct: 1333 gacaaggagagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagac 1390 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 1407 caaaccccaaggccaaagctttgagaggtgcagaagagc 1445
>dbj|AK061440.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C01, full insert sequence Length = 1691 Score = 1257 bits (634), Expect = 0.0 Identities = 1102/1258 (87%) Strand = Plus / Plus Query: 116 cgcctccgccgatggaccgggaagaagtgacggagttcctgggccaggtgcccctcctgc 175 |||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129 cgccgccgcagatggatcgggaagaagtgacggagttcctcggccaggtgcccctcctgc 188 Query: 176 agtgcctccccggctcctccatccgcaggatcgccgaggccgtccaggtcaagcactacg 235 ||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||| ||||| Sbjct: 189 agtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacg 248 Query: 236 aacccagtgattatgttgctcgtgaaggtgaaccagtagatggtctttgcatcatactgg 295 |||| ||| ||| ||||||||||||||||| || |||||||| |||| ||||||| ||| Sbjct: 249 aacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattgg 308 Query: 296 atgggcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagactatg 355 ||||||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||| Sbjct: 309 atgggcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatg 368 Query: 356 tgttaaataagtatgactactttggttatgggaccaatagttctgtacatcaagtaaatg 415 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 369 tgttaaataagtatgactactttggttatggaaccaatagttctgtgcatcaagtaaatg 428 Query: 416 ttattgcggtaacaaagctgtcctgctttgtattgccaagtcaatacggacatctgctgc 475 ||||||| ||| |||||||| ||||||| |||||||||| |||||| ||||| || ||| Sbjct: 429 ttattgcagtatcaaagctgacctgcttcgtattgccaaatcaatatggacacttgttgc 488 Query: 476 aaacaaagacaatttggaatgcagaagaaacacctgaaagccattcattgatggaacaaa 535 || ||||||| ||||||| ||||||||| |||||||| | |||||| ||| | ||||||| Sbjct: 489 aaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaa 548 Query: 536 ttttacatctggagaaattagaggttgatatctttcgtggatttactttgccagaagctc 595 |||| || | ||| ||| ||||| |||||||| ||||| ||||||||||||| ||||| Sbjct: 549 ttttgcacttagagccattggaggtcgatatcttccgtgggtttactttgccaggagctc 608 Query: 596 caacttttaggcaagtttttggaggacaattgattgggcaggcactagcagcagcatcca 655 | |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 609 cgacttttaggcaagtttttggaggacagttgataggacaggcactagcagcagcatcca 668 Query: 656 agactgtcgattgcttgaaacttgtgcatagtctgcatgcaatttttctaatagcaggag 715 |||| || || ||| | ||| ||||| ||| |||| |||||||| || || ||||||| Sbjct: 669 agaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggag 728 Query: 716 ataatgatatgccaataatatatcaagtacatcgggagcgtgatggaaccagctttgcca 775 | || || |||||||||||||||| || ||||||| ||| |||||||| |||||||||| Sbjct: 729 acaagaatttgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgcca 788 Query: 776 ccagaaaagtggaggcaaagcagaaaggccttgttatgttcactttaattgtttctttcc 835 |||||||||||||||||||||| || |||||||| || ||||| || |||| ||| |||| Sbjct: 789 ccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattcc 848 Query: 836 agaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctccag 895 |||| || ||| ||||||| |||||||| |||||||||||||| | |||||||||||||| Sbjct: 849 agaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccag 908 Query: 896 aacagctgttgaatatggaggagatacgagaaagaagactcactgatccacgatttccga 955 || |||| ||||| |||| |||||||| ||||||||||| |||||||| || || || | Sbjct: 909 aagagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaa 968 Query: 956 tgcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggt 1015 |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 969 tgcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggt 1028 Query: 1016 tctgccaagattctaaatctcaacatgaaccaagcctgcattattggtttagagctagag 1075 | || ||||||| |||||||||| |||||||| | |||||||||||||||| |||| Sbjct: 1029 tttgtgaagattcagcatctcaacataaaccaagcttaaattattggtttagagccagag 1088 Query: 1076 gaaaactttcagatgatccagctctgcatagatgcgtcgtagcatatgcttcagatctac 1135 |||||||||| ||||||||||| |||||||| || || |||||||||||||| ||||||| Sbjct: 1089 gaaaactttctgatgatccagcactgcataggtgtgttgtagcatatgcttcggatctac 1148 Query: 1136 tatattcgggcgtcagcctaaatccacaccgggagaggggtttgaagacatactctctca 1195 ||||||| || |||||||||||||| || |||||| |||| ||||||||||||| |||| Sbjct: 1149 tatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcactca 1208 Query: 1196 gtcttgatcactcgatgtggttccacaagcctgtcaaagctgatgactggttgttatatg 1255 |||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||| Sbjct: 1209 gtcttgatcactcgatttggttccacaagcctgtgaaagctgatgattggcttttatatg 1268 Query: 1256 tgatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttcaacc 1315 |||||||||||||||| ||||||||||| |||| || || || || || |||||||||| Sbjct: 1269 tgatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaacc 1328 Query: 1316 ggcaaggagagctcatcgtgtcgctgacccaagaggcgttgattaggagagccaagac 1373 | |||||||||||| || ||||| |||||||||||||| |||||||||| || ||||| Sbjct: 1329 gacaaggagagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagac 1386 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 1403 caaaccccaaggccaaagctttgagaggtgcagaagagc 1441
>dbj|AK061940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D09, full insert sequence Length = 1384 Score = 1049 bits (529), Expect = 0.0 Identities = 943/1081 (87%) Strand = Plus / Plus Query: 293 tggatgggcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagact 352 |||||||||||||||| ||||| |||||||||||||||||||||| |||||| || |||| Sbjct: 4 tggatgggcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgact 63 Query: 353 atgtgttaaataagtatgactactttggttatgggaccaatagttctgtacatcaagtaa 412 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 64 atgtgttaaataagtatgactactttggttatggaaccaatagttctgtgcatcaagtaa 123 Query: 413 atgttattgcggtaacaaagctgtcctgctttgtattgccaagtcaatacggacatctgc 472 |||||||||| ||| |||||||| ||||||| |||||||||| |||||| ||||| || Sbjct: 124 atgttattgcagtatcaaagctgacctgcttcgtattgccaaatcaatatggacacttgt 183 Query: 473 tgcaaacaaagacaatttggaatgcagaagaaacacctgaaagccattcattgatggaac 532 ||||| ||||||| ||||||| ||||||||| |||||||| | |||||| ||| | |||| Sbjct: 184 tgcaaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaac 243 Query: 533 aaattttacatctggagaaattagaggttgatatctttcgtggatttactttgccagaag 592 ||||||| || | ||| ||| ||||| |||||||| ||||| ||||||||||||| || Sbjct: 244 aaattttgcacttagagccattggaggtcgatatcttccgtgggtttactttgccaggag 303 Query: 593 ctccaacttttaggcaagtttttggaggacaattgattgggcaggcactagcagcagcat 652 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 304 ctccgacttttaggcaagtttttggaggacagttgataggacaggcactagcagcagcat 363 Query: 653 ccaagactgtcgattgcttgaaacttgtgcatagtctgcatgcaatttttctaatagcag 712 ||||||| || || ||| | ||| ||||| ||| |||| |||||||| || || |||| Sbjct: 364 ccaagaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcag 423 Query: 713 gagataatgatatgccaataatatatcaagtacatcgggagcgtgatggaaccagctttg 772 |||| || || |||||||||||||||| || ||||||| ||| |||||||| ||||||| Sbjct: 424 gagacaagaatttgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttg 483 Query: 773 ccaccagaaaagtggaggcaaagcagaaaggccttgttatgttcactttaattgtttctt 832 ||||||||||||||||||||||||| || |||||||| || ||||| || |||| ||| | Sbjct: 484 ccaccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcat 543 Query: 833 tccagaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctc 892 ||||||| || ||| ||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 544 tccagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctc 603 Query: 893 cagaacagctgttgaatatggaggagatacgagaaagaagactcactgatccacgatttc 952 ||||| |||| ||||| |||| |||||||| ||||||||||| |||||||| || || | Sbjct: 604 cagaagagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcc 663 Query: 953 cgatgcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatga 1012 | ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 664 caatgcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatga 723 Query: 1013 ggttctgccaagattctaaatctcaacatgaaccaagcctgcattattggtttagagcta 1072 |||| || ||||||| |||||||||| |||||||| | |||||||||||||||| | Sbjct: 724 ggttttgtgaagattcagcatctcaacataaaccaagcttaaattattggtttagagcca 783 Query: 1073 gaggaaaactttcagatgatccagctctgcatagatgcgtcgtagcatatgcttcagatc 1132 ||||||||||||| ||||||||||| |||||||| || || |||||||||||||| |||| Sbjct: 784 gaggaaaactttctgatgatccagcactgcataggtgtgttgtagcatatgcttcggatc 843 Query: 1133 tactatattcgggcgtcagcctaaatccacaccgggagaggggtttgaagacatactctc 1192 |||||||||| || |||||||||||||| || |||||| |||| ||||||||||||| | Sbjct: 844 tactatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcac 903 Query: 1193 tcagtcttgatcactcgatgtggttccacaagcctgtcaaagctgatgactggttgttat 1252 ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| | |||| Sbjct: 904 tcagtcttgatcactcgatttggttccacaagcctgtgaaagctgatgattggcttttat 963 Query: 1253 atgtgatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttca 1312 ||||||||||||||||||| ||||||||||| |||| || || || || || ||||||| Sbjct: 964 atgtgatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttca 1023 Query: 1313 accggcaaggagagctcatcgtgtcgctgacccaagaggcgttgattaggagagccaaga 1372 |||| |||||||||||| || ||||| |||||||||||||| |||||||||| || |||| Sbjct: 1024 accgacaaggagagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaaga 1083 Query: 1373 c 1373 | Sbjct: 1084 c 1084 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 1101 caaaccccaaggccaaagctttgagaggtgcagaagagc 1139
>gb|AY110068.1| Zea mays CL483_1 mRNA sequence Length = 1716 Score = 408 bits (206), Expect = e-110 Identities = 522/630 (82%) Strand = Plus / Plus Query: 730 ataatatatcaagtacatcgggagcgtgatggaaccagctttgccaccagaaaagtggag 789 |||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||| Sbjct: 719 ataatatatcaagttcatcgggcacgtgatggatccagctttgccacaagaaaagtggag 778 Query: 790 gcaaagcagaaaggccttgttatgttcactttaattgtttctttccagaaggaagaaata 849 ||||||||||| ||||| ||| | ||||| || |||| ||||||||||||||||||| | Sbjct: 779 gcaaagcagaagggcctagttgtattcaccttgattgcttctttccagaaggaagaagtg 838 Query: 850 gggttcgagcatcaggctgcaatcatgcccgttgttcctcctccagaacagctgttgaat 909 || || ||||||||||||||||||||||| | ||||||||| ||||||||||| | ||| Sbjct: 839 ggttttgagcatcaggctgcaatcatgcctgatgttcctccgccagaacagctccttaat 898 Query: 910 atggaggagatacgagaaagaagactcactgatccacgatttccgatgcaatataggaac 969 ||||||||||||| |||||| | || ||||||||||| || || |||||||||||| Sbjct: 899 ctggaggagatacgtgaaagacggcttactgatccacgcttcccatcccaatataggaac 958 Query: 970 tcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggttctgccaagattct 1029 | ||| || |||| | ||||||||||| |||||||| || || ||| ||| Sbjct: 959 ttggcagctnnnnnnnngtttattccttggcccatagaaatgagattttgtgaaggttca 1018 Query: 1030 aaatctcaacatgaaccaagcctgcattattggtttagagctagaggaaaactttcagat 1089 ||||||||| |||||||| | | || |||||||||||| |||| ||||| ||||| Sbjct: 1019 gcgtctcaacataaaccaagcttaaactactggtttagagctcgagggaaactctcagac 1078 Query: 1090 gatccagctctgcatagatgcgtcgtagcatatgcttcagatctactatattcgggcgtc 1149 || | |||||| || ||| | || |||||||||||||| |||||||||| ||| || || Sbjct: 1079 gaccaagctctacacagacgagttgtagcatatgcttcggatctactattttctggggtg 1138 Query: 1150 agcctaaatccacaccgggagaggggtttgaagacatactctctcagtcttgatcactcg 1209 ||||| || || || ||||||| ||||||||||||||||| ||||||||||| || || Sbjct: 1139 agccttaaccctcatcgggagaagggtttgaagacatactgcctcagtcttgaccattcc 1198 Query: 1210 atgtggttccacaagcctgtcaaagctgatgactggttgttatatgtgatcgacagccca 1269 || ||||||||||| ||||| || ||||| || ||| || | ||||||||||| |||||| Sbjct: 1199 atctggttccacaaacctgtgaaggctgacgaatggatgctgtatgtgatcgagagccca 1258 Query: 1270 tccgcacacggtggtaggggattcgtcaccggacgtatgttcaaccggcaaggagagctc 1329 || || ||||||||| | || |||||||||||||| ||||||||| ||||||||||||| Sbjct: 1259 tctgcgcacggtggtcgcggtttcgtcaccggacgcatgttcaacaggcaaggagagctt 1318 Query: 1330 atcgtgtcgctgacccaagaggcgttgatt 1359 ||| ||||||||||||||||||| |||||| Sbjct: 1319 atcatgtcgctgacccaagaggcattgatt 1348 Score = 391 bits (197), Expect = e-105 Identities = 420/497 (84%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 136 gaagaagtgacggagttcctgggccaggtgcccctcctgcagtgcctccccggctcctcc 195 ||||||||||| || ||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 124 gaagaagtgaccgaattcctgggccaggtgcccctcctgcagtgcctcccgggttcctct 183 Query: 196 atccgcaggatcgccgaggccgtccaggtcaagcactacgaacccagtgattatgttgct 255 |||||||| ||||| |||||||||||||||||| |||||||||| |||| ||||| ||| Sbjct: 184 atccgcagaatcgcggaggccgtccaggtcaagaactacgaacctggtgactatgtcgct 243 Query: 256 cgtgaaggtgaaccagtagatggtctttgcatcatactggatgggcaggctgaagtttct 315 || ||||||||||| || |||| |||| ||||||| ||||||| ||||||||||||||| Sbjct: 244 cgcgaaggtgaacctgtcaatggcctttacatcatagtggatggccaggctgaagtttct 303 Query: 316 gctcctgcaaacacagaagaagcaaaccgtccagactatgtgttaaataagtatgactac 375 || ||||| || ||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 304 gcacctgcgaatgcagaagaagcaaatcgcccagactatgtgttaaataagtacgactac 363 Query: 376 tttggttatgggaccaatagttctgtacatcaagtaaatgttattgcggtaacaaagctg 435 ||||||||||| || ||||||||||| |||||||| |||||| |||| || |||||||| Sbjct: 364 tttggttatggaactaatagttctgttcatcaagtcaatgttgttgcactatcaaagctg 423 Query: 436 tcctgctttgtattgccaagtcaatacggacatctgctgcaaacaaagacaatttggaat 495 ||||||| ||||||| | |||||| ||||| || | ||| | |||| |||||| Sbjct: 424 acctgcttcatattgcccaatcaatatggacacttgttacaaccnnnnncaatatggaat 483 Query: 496 gcagaagaaacacctgaaagccattcattgatggaacaaattttacatctggagaaatta 555 ||||| |||||||||||| ||||| ||| ||||||||||||| || | || | || Sbjct: 484 gcagaggaaacacctgaa---cattctttgctggaacaaattttgcacttagaaccacta 540 Query: 556 gaggttgatatctttcgtggatttactttgccagaagctccaacttttaggcaagttttt 615 ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||| Sbjct: 541 gaggtcgatattttccgtgggtttactttgccggaagctccaacttttaggcaagnnnnn 600 Query: 616 ggaggacaattgattgg 632 ||||||||||| ||||| Sbjct: 601 ggaggacaattcattgg 617
>emb|CR855240.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0103C08-B0602B01, complete sequence Length = 150079 Score = 141 bits (71), Expect = 9e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 141 agtgacggagttcctgggccaggtgcccctcctgcagtgcctccccggctcctccatccg 200 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 49263 agtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccg 49322 Query: 201 caggatcgccgaggccgtccaggtcaagcactacg 235 |||||||||||| ||||||| ||| |||| ||||| Sbjct: 49323 caggatcgccgacgccgtcctggtgaagcgctacg 49357 Score = 133 bits (67), Expect = 2e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 300 gcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagactatgtgtt 359 ||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 50585 gcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgtt 50644 Query: 360 aaataagtatgactactttggttatgg 386 ||||||||||||||||||||||||||| Sbjct: 50645 aaataagtatgactactttggttatgg 50671 Score = 121 bits (61), Expect = 9e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 725 tgccaataatatatcaagtacatcgggagcgtgatggaaccagctttgccaccagaaaag 784 |||||||||||||||| || ||||||| ||| |||||||| ||||||||||||||||||| Sbjct: 52535 tgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaag 52594 Query: 785 tggaggcaaagcagaaaggccttgttatgttcactttaattgtttctttccag 837 ||||||||||||| || |||||||| || ||||| || |||| ||| |||||| Sbjct: 52595 tggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccag 52647 Score = 119 bits (60), Expect = 3e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 1114 gtagcatatgcttcagatctactatattcgggcgtcagcctaaatccacaccgggagagg 1173 |||||||||||||| |||||||||||||| || |||||||||||||| || |||||| | Sbjct: 54611 gtagcatatgcttcggatctactatattctggtgtcagcctaaatcctcatagggagaag 54670 Query: 1174 ggtttgaagacatactctctcagtcttgatcactcg 1209 ||| ||||||||||||| |||||||||||||||||| Sbjct: 54671 ggtctgaagacatactcactcagtcttgatcactcg 54706 Score = 105 bits (53), Expect = 5e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 957 gcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggtt 1016 ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 54115 gcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggtt 54174 Query: 1017 ctgccaagattctaaatctcaacatgaaccaag 1049 || ||||||| |||||||||| ||||||| Sbjct: 54175 ttgtgaagattcagcatctcaacataaaccaag 54207 Score = 101 bits (51), Expect = 8e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 557 aggttgatatctttcgtggatttactttgccagaagctccaacttttaggcaagtttttg 616 |||| |||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||| Sbjct: 51463 aggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttg 51522 Query: 617 gaggacaattgattgggcaggca 639 ||||||| ||||| || |||||| Sbjct: 51523 gaggacagttgataggacaggca 51545 Score = 81.8 bits (41), Expect = 7e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 431 agctgtcctgctttgtattgccaagtcaatacggacatctgctgcaaacaaagacaattt 490 ||||| ||||||| |||||||||| |||||| ||||| || ||||| ||||||| |||| Sbjct: 50959 agctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccattt 51018 Query: 491 ggaatgcagaagaaacacctgaaagccattcattgatggaacaaatttt 539 ||| ||||||||| |||||||| | ||| || ||| | ||||||||||| Sbjct: 51019 ggagtgcagaagagacacctgagaaccactctttgctagaacaaatttt 51067 Score = 79.8 bits (40), Expect = 3e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 1055 attattggtttagagctagaggaaaactttcagatgatccagctctgcatag 1106 |||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 54476 attattggtttagagccagaggaaaactttctgatgatccagcactgcatag 54527 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 250 gttgctcgtgaaggtgaaccagtagatggtctttgcatcatactggatgggcagg 304 ||||||||||||||||| || |||||||| |||| ||||||| |||||||||||| Sbjct: 50070 gttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcagg 50124 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 835 cagaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctcca 894 ||||| || ||| ||||||| |||||||| |||||||||||||| | ||||||||||||| Sbjct: 53586 cagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctcca 53645 Query: 895 gaa 897 ||| Sbjct: 53646 gaa 53648 Score = 65.9 bits (33), Expect = 4e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 388 accaatagttctgtacatcaagtaaatgttattgcggtaacaaag 432 |||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 50807 accaatagttctgtgcatcaagtaaatgttattgcagtatcaaag 50851 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1257 gatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttcaaccg 1316 ||||||||||||||| ||||||||||| |||| || || || || || ||||||||||| Sbjct: 54930 gatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaaccg 54989 Query: 1317 gcaaggagag 1326 ||||||||| Sbjct: 54990 acaaggagag 54999 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1213 tggttccacaagcctgtcaaagctgatgactggttgttatatgtg 1257 ||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 54795 tggttccacaagcctgtgaaagctgatgattggcttttatatgtg 54839 Score = 52.0 bits (26), Expect = 0.007 Identities = 68/82 (82%) Strand = Plus / Plus Query: 635 aggcactagcagcagcatccaagactgtcgattgcttgaaacttgtgcatagtctgcatg 694 ||||||||||||||||||||||||| || || ||| | ||| ||||| ||| |||| | Sbjct: 52050 aggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacg 52109 Query: 695 caatttttctaatagcaggaga 716 ||||||| || || |||||||| Sbjct: 52110 caattttccttatcgcaggaga 52131 Score = 50.1 bits (25), Expect = 0.026 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1325 agctcatcgtgtcgctgacccaagaggcgttgattaggagagccaagac 1373 ||||| || ||||| |||||||||||||| |||||||||| || ||||| Sbjct: 55097 agctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagac 55145 Score = 48.1 bits (24), Expect = 0.10 Identities = 36/40 (90%) Strand = Plus / Plus Query: 905 tgaatatggaggagatacgagaaagaagactcactgatcc 944 ||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 53727 tgaatctggaagagatacgggaaagaagacttactgatcc 53766 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 55162 caaaccccaaggccaaagctttgagaggtgcagaagagc 55200
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 141 bits (71), Expect = 9e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 141 agtgacggagttcctgggccaggtgcccctcctgcagtgcctccccggctcctccatccg 200 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27957651 agtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccg 27957710 Query: 201 caggatcgccgaggccgtccaggtcaagcactacg 235 |||||||||||| ||||||| ||| |||| ||||| Sbjct: 27957711 caggatcgccgacgccgtcctggtgaagcgctacg 27957745 Score = 133 bits (67), Expect = 2e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 300 gcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagactatgtgtt 359 ||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 27958973 gcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgtt 27959032 Query: 360 aaataagtatgactactttggttatgg 386 ||||||||||||||||||||||||||| Sbjct: 27959033 aaataagtatgactactttggttatgg 27959059 Score = 121 bits (61), Expect = 9e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 725 tgccaataatatatcaagtacatcgggagcgtgatggaaccagctttgccaccagaaaag 784 |||||||||||||||| || ||||||| ||| |||||||| ||||||||||||||||||| Sbjct: 27960922 tgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaag 27960981 Query: 785 tggaggcaaagcagaaaggccttgttatgttcactttaattgtttctttccag 837 ||||||||||||| || |||||||| || ||||| || |||| ||| |||||| Sbjct: 27960982 tggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccag 27961034 Score = 119 bits (60), Expect = 3e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 1114 gtagcatatgcttcagatctactatattcgggcgtcagcctaaatccacaccgggagagg 1173 |||||||||||||| |||||||||||||| || |||||||||||||| || |||||| | Sbjct: 27962998 gtagcatatgcttcggatctactatattctggtgtcagcctaaatcctcatagggagaag 27963057 Query: 1174 ggtttgaagacatactctctcagtcttgatcactcg 1209 ||| ||||||||||||| |||||||||||||||||| Sbjct: 27963058 ggtctgaagacatactcactcagtcttgatcactcg 27963093 Score = 105 bits (53), Expect = 5e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 957 gcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggtt 1016 ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 27962502 gcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggtt 27962561 Query: 1017 ctgccaagattctaaatctcaacatgaaccaag 1049 || ||||||| |||||||||| ||||||| Sbjct: 27962562 ttgtgaagattcagcatctcaacataaaccaag 27962594 Score = 101 bits (51), Expect = 8e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 557 aggttgatatctttcgtggatttactttgccagaagctccaacttttaggcaagtttttg 616 |||| |||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||| Sbjct: 27959851 aggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttg 27959910 Query: 617 gaggacaattgattgggcaggca 639 ||||||| ||||| || |||||| Sbjct: 27959911 gaggacagttgataggacaggca 27959933 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 431 agctgtcctgctttgtattgccaagtcaatacggacatctgctgcaaacaaagacaattt 490 ||||| ||||||| |||||||||| |||||| ||||| || ||||| ||||||| |||| Sbjct: 27959347 agctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccattt 27959406 Query: 491 ggaatgcagaagaaacacctgaaagccattcattgatggaacaaatttt 539 ||| ||||||||| |||||||| | |||||| ||| | ||||||||||| Sbjct: 27959407 ggagtgcagaagagacacctgagaaccattctttgctagaacaaatttt 27959455 Score = 79.8 bits (40), Expect = 3e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 1055 attattggtttagagctagaggaaaactttcagatgatccagctctgcatag 1106 |||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 27962863 attattggtttagagccagaggaaaactttctgatgatccagcactgcatag 27962914 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 250 gttgctcgtgaaggtgaaccagtagatggtctttgcatcatactggatgggcagg 304 ||||||||||||||||| || |||||||| |||| ||||||| |||||||||||| Sbjct: 27958458 gttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcagg 27958512 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 835 cagaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctcca 894 ||||| || ||| ||||||| |||||||| |||||||||||||| | ||||||||||||| Sbjct: 27961973 cagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctcca 27962032 Query: 895 gaa 897 ||| Sbjct: 27962033 gaa 27962035 Score = 65.9 bits (33), Expect = 4e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 388 accaatagttctgtacatcaagtaaatgttattgcggtaacaaag 432 |||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 27959195 accaatagttctgtgcatcaagtaaatgttattgcagtatcaaag 27959239 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1257 gatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttcaaccg 1316 ||||||||||||||| ||||||||||| |||| || || || || || ||||||||||| Sbjct: 27963317 gatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaaccg 27963376 Query: 1317 gcaaggagag 1326 ||||||||| Sbjct: 27963377 acaaggagag 27963386 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1213 tggttccacaagcctgtcaaagctgatgactggttgttatatgtg 1257 ||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 27963182 tggttccacaagcctgtgaaagctgatgattggcttttatatgtg 27963226 Score = 52.0 bits (26), Expect = 0.007 Identities = 68/82 (82%) Strand = Plus / Plus Query: 635 aggcactagcagcagcatccaagactgtcgattgcttgaaacttgtgcatagtctgcatg 694 ||||||||||||||||||||||||| || || ||| | ||| ||||| ||| |||| | Sbjct: 27960437 aggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacg 27960496 Query: 695 caatttttctaatagcaggaga 716 ||||||| || || |||||||| Sbjct: 27960497 caattttccttatcgcaggaga 27960518 Score = 50.1 bits (25), Expect = 0.026 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1325 agctcatcgtgtcgctgacccaagaggcgttgattaggagagccaagac 1373 ||||| || ||||| |||||||||||||| |||||||||| || ||||| Sbjct: 27963484 agctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagac 27963532 Score = 48.1 bits (24), Expect = 0.10 Identities = 36/40 (90%) Strand = Plus / Plus Query: 905 tgaatatggaggagatacgagaaagaagactcactgatcc 944 ||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 27962114 tgaatctggaagagatacgggaaagaagacttactgatcc 27962153 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 27963549 caaaccccaaggccaaagctttgagaggtgcagaagagc 27963587
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 141 bits (71), Expect = 9e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 141 agtgacggagttcctgggccaggtgcccctcctgcagtgcctccccggctcctccatccg 200 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 120504 agtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccg 120563 Query: 201 caggatcgccgaggccgtccaggtcaagcactacg 235 |||||||||||| ||||||| ||| |||| ||||| Sbjct: 120564 caggatcgccgacgccgtcctggtgaagcgctacg 120598 Score = 133 bits (67), Expect = 2e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 300 gcaggctgaagtttctgctcctgcaaacacagaagaagcaaaccgtccagactatgtgtt 359 ||||||||| ||||| |||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 121826 gcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgtt 121885 Query: 360 aaataagtatgactactttggttatgg 386 ||||||||||||||||||||||||||| Sbjct: 121886 aaataagtatgactactttggttatgg 121912 Score = 121 bits (61), Expect = 9e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 725 tgccaataatatatcaagtacatcgggagcgtgatggaaccagctttgccaccagaaaag 784 |||||||||||||||| || ||||||| ||| |||||||| ||||||||||||||||||| Sbjct: 123775 tgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaag 123834 Query: 785 tggaggcaaagcagaaaggccttgttatgttcactttaattgtttctttccag 837 ||||||||||||| || |||||||| || ||||| || |||| ||| |||||| Sbjct: 123835 tggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccag 123887 Score = 119 bits (60), Expect = 3e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 1114 gtagcatatgcttcagatctactatattcgggcgtcagcctaaatccacaccgggagagg 1173 |||||||||||||| |||||||||||||| || |||||||||||||| || |||||| | Sbjct: 125851 gtagcatatgcttcggatctactatattctggtgtcagcctaaatcctcatagggagaag 125910 Query: 1174 ggtttgaagacatactctctcagtcttgatcactcg 1209 ||| ||||||||||||| |||||||||||||||||| Sbjct: 125911 ggtctgaagacatactcactcagtcttgatcactcg 125946 Score = 105 bits (53), Expect = 5e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 957 gcaatataggaactcggctgccaagaaaaagtttgtaccttggcccattgaaatgaggtt 1016 ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 125355 gcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggtt 125414 Query: 1017 ctgccaagattctaaatctcaacatgaaccaag 1049 || ||||||| |||||||||| ||||||| Sbjct: 125415 ttgtgaagattcagcatctcaacataaaccaag 125447 Score = 101 bits (51), Expect = 8e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 557 aggttgatatctttcgtggatttactttgccagaagctccaacttttaggcaagtttttg 616 |||| |||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||| Sbjct: 122704 aggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttg 122763 Query: 617 gaggacaattgattgggcaggca 639 ||||||| ||||| || |||||| Sbjct: 122764 gaggacagttgataggacaggca 122786 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 431 agctgtcctgctttgtattgccaagtcaatacggacatctgctgcaaacaaagacaattt 490 ||||| ||||||| |||||||||| |||||| ||||| || ||||| ||||||| |||| Sbjct: 122200 agctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccattt 122259 Query: 491 ggaatgcagaagaaacacctgaaagccattcattgatggaacaaatttt 539 ||| ||||||||| |||||||| | |||||| ||| | ||||||||||| Sbjct: 122260 ggagtgcagaagagacacctgagaaccattctttgctagaacaaatttt 122308 Score = 79.8 bits (40), Expect = 3e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 1055 attattggtttagagctagaggaaaactttcagatgatccagctctgcatag 1106 |||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 125716 attattggtttagagccagaggaaaactttctgatgatccagcactgcatag 125767 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 250 gttgctcgtgaaggtgaaccagtagatggtctttgcatcatactggatgggcagg 304 ||||||||||||||||| || |||||||| |||| ||||||| |||||||||||| Sbjct: 121311 gttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcagg 121365 Score = 69.9 bits (35), Expect = 3e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 835 cagaaggaagaaatagggttcgagcatcaggctgcaatcatgcccgttgttcctcctcca 894 ||||| || ||| ||||||| |||||||| |||||||||||||| | ||||||||||||| Sbjct: 124826 cagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctcca 124885 Query: 895 gaa 897 ||| Sbjct: 124886 gaa 124888 Score = 65.9 bits (33), Expect = 4e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 388 accaatagttctgtacatcaagtaaatgttattgcggtaacaaag 432 |||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 122048 accaatagttctgtgcatcaagtaaatgttattgcagtatcaaag 122092 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1257 gatcgacagcccatccgcacacggtggtaggggattcgtcaccggacgtatgttcaaccg 1316 ||||||||||||||| ||||||||||| |||| || || || || || ||||||||||| Sbjct: 126170 gatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaaccg 126229 Query: 1317 gcaaggagag 1326 ||||||||| Sbjct: 126230 acaaggagag 126239 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1213 tggttccacaagcctgtcaaagctgatgactggttgttatatgtg 1257 ||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 126035 tggttccacaagcctgtgaaagctgatgattggcttttatatgtg 126079 Score = 52.0 bits (26), Expect = 0.007 Identities = 68/82 (82%) Strand = Plus / Plus Query: 635 aggcactagcagcagcatccaagactgtcgattgcttgaaacttgtgcatagtctgcatg 694 ||||||||||||||||||||||||| || || ||| | ||| ||||| ||| |||| | Sbjct: 123290 aggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacg 123349 Query: 695 caatttttctaatagcaggaga 716 ||||||| || || |||||||| Sbjct: 123350 caattttccttatcgcaggaga 123371 Score = 50.1 bits (25), Expect = 0.026 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1325 agctcatcgtgtcgctgacccaagaggcgttgattaggagagccaagac 1373 ||||| || ||||| |||||||||||||| |||||||||| || ||||| Sbjct: 126337 agctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagac 126385 Score = 48.1 bits (24), Expect = 0.10 Identities = 36/40 (90%) Strand = Plus / Plus Query: 905 tgaatatggaggagatacgagaaagaagactcactgatcc 944 ||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 124967 tgaatctggaagagatacgggaaagaagacttactgatcc 125006 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1381 caaaccccaaggccgaagctttgaaccgtgcagaagagc 1419 |||||||||||||| ||||||||| |||||||||||| Sbjct: 126402 caaaccccaaggccaaagctttgagaggtgcagaagagc 126440
>emb|AJ717741.1| Hordeum vulgare arob gene (partial), betaGAL2 pseudogene (partial), tRNA-Pro gene and ORF_2 (partial), clone 343I11 Length = 7349 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 95 ctccccctcccgccccgccgacgcctccgccg 126 ||||||||| |||||||||| ||||||||||| Sbjct: 5977 ctccccctcgcgccccgccgccgcctccgccg 6008
>gb|BT013771.1| Lycopersicon esculentum clone 132659F, mRNA sequence Length = 1864 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1057 tattggtttagagctagaggaaaactttcagatga 1091 |||||||| ||||| | |||||||||||||||||| Sbjct: 1085 tattggttcagagcaaaaggaaaactttcagatga 1119 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1195 agtcttgatcactcgatgtggttccacaagcctgtcaaagctgatga 1241 ||||| ||||| |||||||||||||||| ||||| | ||||||||| Sbjct: 1223 agtctggatcattcgatgtggttccacagacctgtgagagctgatga 1269
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Minus Query: 300 gcaggctgaagtttctgctcctgcaaacacagaagaagcaaac 342 ||||| ||| ||||| |||||||||||||||||| ||| |||| Sbjct: 12942589 gcaggttgaggtttcggctcctgcaaacacagaaaaagaaaac 12942547
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Minus Query: 300 gcaggctgaagtttctgctcctgcaaacacagaagaagcaaac 342 ||||| ||| ||||| |||||||||||||||||| ||| |||| Sbjct: 104573 gcaggttgaggtttcggctcctgcaaacacagaaaaagaaaac 104531
>gb|AC090670.11| Homo sapiens 12 BAC RP11-809C9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 43577 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1209 gatgtggttccacaagcctgtca 1231 ||||||||||||||||||||||| Sbjct: 10352 gatgtggttccacaagcctgtca 10330
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1201 gatcactcgatgtggttccaca 1222 |||||||||||||||||||||| Sbjct: 4846549 gatcactcgatgtggttccaca 4846528
>gb|U69730.1| Homo sapiens Xp22 Cosmids U98B4 and U24F2 (Lawrence Livermore human cosmid library) complete sequence Length = 64767 Score = 44.1 bits (22), Expect = 1.6 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 1436 tattttcttttccttcgctgttccatatttttca 1469 |||||||||||| ||| ||||||||||||||||| Sbjct: 44689 tattttcttttc-ttcactgttccatatttttca 44657
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 tgcctccccggctcctccatcc 199 |||||||||||||||||||||| Sbjct: 27528376 tgcctccccggctcctccatcc 27528397
>gb|AC116611.4| Homo sapiens BAC clone RP13-581D7 from 4, complete sequence Length = 165959 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1428 tactttaatattttcttttcct 1449 |||||||||||||||||||||| Sbjct: 27423 tactttaatattttcttttcct 27402
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 tgcctccccggctcctccatcc 199 |||||||||||||||||||||| Sbjct: 8045 tgcctccccggctcctccatcc 8066
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 tgcctccccggctcctccatcc 199 |||||||||||||||||||||| Sbjct: 120098 tgcctccccggctcctccatcc 120119
>emb|AJ338899.1|HSA338899 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VF1R Length = 659 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 784 gtggaggcaaagcagaaaggccttgt 809 ||||| |||||||||||||||||||| Sbjct: 449 gtggatgcaaagcagaaaggccttgt 474
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 catactggatgggcaggctgaa 309 |||||||||||||||||||||| Sbjct: 3482842 catactggatgggcaggctgaa 3482863
>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete sequence Length = 227692 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 gctgctgtgctgctgctccccc 101 |||||||||||||||||||||| Sbjct: 68553 gctgctgtgctgctgctccccc 68532
>ref|NM_001064573.1| Oryza sativa (japonica cultivar-group) Os06g0608300 (Os06g0608300) mRNA, complete cds Length = 3519 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gctccccctcccgccccgccg 114 ||||||||||||||||||||| Sbjct: 248 gctccccctcccgccccgccg 268
>gb|AC188304.1| Pongo pygmaeus abelii chromosome UNK clone CH276-1H12, complete sequence Length = 201974 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 31624 ctgcaaacaaagacaatttgg 31604
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 59 cggcgcgcagctgctcccggtgctgctgt 87 |||||||| |||||||| ||||||||||| Sbjct: 550965 cggcgcgctgctgctcctggtgctgctgt 550993
>emb|AL132904.5|CEY111B2A Caenorhabditis elegans YAC Y111B2A, complete sequence Length = 257705 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ggtgctgctgtgctgctgctc 97 ||||||||||||||||||||| Sbjct: 60332 ggtgctgctgtgctgctgctc 60352
>ref|XM_899804.2| PREDICTED: Mus musculus talin 2, transcript variant 5 (Tln2), mRNA Length = 7774 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 5847 actcgatgtggtgccacaagcctgt 5871
>ref|XM_988686.1| PREDICTED: Mus musculus talin 2, transcript variant 7 (Tln2), mRNA Length = 10031 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8104 actcgatgtggtgccacaagcctgt 8128
>ref|XM_899801.2| PREDICTED: Mus musculus talin 2, transcript variant 4 (Tln2), mRNA Length = 10034 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8107 actcgatgtggtgccacaagcctgt 8131
>ref|XM_899810.2| PREDICTED: Mus musculus talin 2, transcript variant 6 (Tln2), mRNA Length = 10790 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8863 actcgatgtggtgccacaagcctgt 8887
>ref|XM_899795.2| PREDICTED: Mus musculus talin 2, transcript variant 3 (Tln2), mRNA Length = 11063 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 9136 actcgatgtggtgccacaagcctgt 9160
>ref|XM_486227.4| PREDICTED: Mus musculus talin 2, transcript variant 1 (Tln2), mRNA Length = 11106 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 9179 actcgatgtggtgccacaagcctgt 9203
>ref|XM_891849.2| PREDICTED: Mus musculus talin 2, transcript variant 2 (Tln2), mRNA Length = 11060 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 9133 actcgatgtggtgccacaagcctgt 9157
>ref|XM_925518.2| PREDICTED: Mus musculus similar to Talin-2, transcript variant 4 (LOC639214), mRNA Length = 7773 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 5846 actcgatgtggtgccacaagcctgt 5870
>ref|XM_001004218.1| PREDICTED: Mus musculus similar to Talin-2, transcript variant 6 (LOC639214), mRNA Length = 10030 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8103 actcgatgtggtgccacaagcctgt 8127
>ref|XM_925517.2| PREDICTED: Mus musculus similar to Talin-2, transcript variant 3 (LOC639214), mRNA Length = 10076 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8149 actcgatgtggtgccacaagcctgt 8173
>ref|XM_001004223.1| PREDICTED: Mus musculus similar to Talin-2, transcript variant 7 (LOC639214), mRNA Length = 10049 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8122 actcgatgtggtgccacaagcctgt 8146
>ref|XM_001004230.1| PREDICTED: Mus musculus similar to Talin-2, transcript variant 8 (LOC639214), mRNA Length = 10832 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8905 actcgatgtggtgccacaagcctgt 8929
>ref|XM_925519.2| PREDICTED: Mus musculus similar to Talin-2, transcript variant 5 (LOC639214), mRNA Length = 10877 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 8950 actcgatgtggtgccacaagcctgt 8974
>ref|XM_925515.2| PREDICTED: Mus musculus similar to Talin-2, transcript variant 2 (LOC639214), mRNA Length = 11105 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 9178 actcgatgtggtgccacaagcctgt 9202
>ref|XM_918125.2| PREDICTED: Mus musculus similar to Talin-2, transcript variant 1 (LOC639214), mRNA Length = 11102 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 9175 actcgatgtggtgccacaagcctgt 9199
>ref|XM_993333.1| PREDICTED: Mus musculus hypothetical protein LOC667935 (LOC667935), mRNA Length = 672 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agctgctcccggtgctgctgt 87 ||||||||||||||||||||| Sbjct: 496 agctgctcccggtgctgctgt 516
>ref|XM_363259.1| Magnaporthe grisea 70-15 hypothetical protein (MG01185.4) partial mRNA Length = 774 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1142 cgggcgtcagcctaaatccac 1162 ||||||||||||||||||||| Sbjct: 710 cgggcgtcagcctaaatccac 730
>gb|AC107740.17| Mus musculus chromosome 9, clone RP23-340D4, complete sequence Length = 223066 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 207526 actcgatgtggtgccacaagcctgt 207550
>gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, complete sequence Length = 190372 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 atgtgttaaataagtatgact 373 ||||||||||||||||||||| Sbjct: 81093 atgtgttaaataagtatgact 81113
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1205 actcgatgtggttccacaagcctgt 1229 |||||||||||| |||||||||||| Sbjct: 155189 actcgatgtggtgccacaagcctgt 155165
>gb|AC103968.11| Homo sapiens chromosome 15, clone RP11-719C20, complete sequence Length = 162470 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 466 catctgctgcaaacaaagacaattt 490 ||||||||||||||| ||||||||| Sbjct: 117784 catctgctgcaaacagagacaattt 117760
>gb|AC118240.8| Mus musculus chromosome 16, clone RP23-186J5, complete sequence Length = 222869 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 cggtgctgctgtgctgctgct 96 ||||||||||||||||||||| Sbjct: 161756 cggtgctgctgtgctgctgct 161736
>gb|AC160116.2| Mus musculus BAC clone RP23-456L15 from chromosome 9, complete sequence Length = 182041 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 433 ctgtcctgctttgtattgcca 453 ||||||||||||||||||||| Sbjct: 97996 ctgtcctgctttgtattgcca 98016
>gb|AC091051.6| Homo sapiens chromosome 11, clone RP11-423H12, complete sequence Length = 177363 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 44033 ctgcaaacaaagacaatttgg 44053
>dbj|AK009486.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310022O21 product:unclassifiable, full insert sequence Length = 840 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 ctgtcctgctttgtattgcca 453 ||||||||||||||||||||| Sbjct: 464 ctgtcctgctttgtattgcca 444
>gb|AC068657.6| Homo sapiens chromosome 5 clone CTB-67I13, complete sequence Length = 128332 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 825 tgtttctttccagaaggaaga 845 ||||||||||||||||||||| Sbjct: 56369 tgtttctttccagaaggaaga 56389
>gb|AC113412.2| Homo sapiens chromosome 5 clone RP11-509M23, complete sequence Length = 169637 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 819 tttaattgtttctttccagaa 839 ||||||||||||||||||||| Sbjct: 82706 tttaattgtttctttccagaa 82686
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gctccccctcccgccccgccg 114 ||||||||||||||||||||| Sbjct: 23828670 gctccccctcccgccccgccg 23828650
>emb|BX322609.3| Human DNA sequence from clone RP13-1021K9 on chromosome X Contains the 3' end of the KLF8 gene for Kruppel-like factor 8, complete sequence Length = 151588 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 60214 ctgcaaacaaagacaatttgg 60234
>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence Length = 107764 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1426 tgtactttaatattttctttt 1446 ||||||||||||||||||||| Sbjct: 101378 tgtactttaatattttctttt 101358
>emb|AL645495.4| Human DNA sequence from clone RP13-472L18 on chromosome 13, complete sequence Length = 81091 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 73660 ctgcaaacaaagacaatttgg 73640
>emb|AL161450.14| Human DNA sequence from clone RP11-39K24 on chromosome 9 Contains the 3' end of the JAK2 gene for Janus kinase 2 (a protein tyrosine kinase), a casein kinase pseudogene, a trans-prenyltransferase (TPT) pseudogene, a NADH dehydrogenase 6 (MTND6) pseuodgene, a NADH dehydrogenase 1 (MTND1) pseudogene, a cytochrome c oxidase I (MTCO1) pseudogene, a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, a NADH dehydrogenase 4 (MTND4)pseudogene, a pseudogene similar to part of NADH dehydrogenase 5 (MTND5), a transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3) pseudogene, an immunoglobulin heavy constant epsilon pseudogene 2 (IGHEP2), a novel gene, the INSL6 gene for insulin-like 6 (RIF1) and 4 CpG islands, complete sequence Length = 171146 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 152846 ctgcaaacaaagacaatttgg 152826
>emb|AL136991.26| Human DNA sequence from clone RP11-189J1 on chromosome 20 Contains the 3' end of the gene for a novel protein (LOC284776), complete sequence Length = 169342 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 98166 ctgcaaacaaagacaatttgg 98146
>emb|AL136109.11| Human DNA sequence from clone RP5-924G13 on chromosome 1 Contains a novel gene (KIAA1221) and a ribosomal protein L5 (RPL5) pseudogene, complete sequence Length = 126367 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1426 tgtactttaatattttctttt 1446 ||||||||||||||||||||| Sbjct: 17374 tgtactttaatattttctttt 17354
>emb|BX119922.11| Zebrafish DNA sequence from clone CH211-272D23 in linkage group 19, complete sequence Length = 79729 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1559 atccttgcatgctaattcaca 1579 ||||||||||||||||||||| Sbjct: 70725 atccttgcatgctaattcaca 70745
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cggcgcgcagctgctcccggt 79 ||||||||||||||||||||| Sbjct: 3712086 cggcgcgcagctgctcccggt 3712106
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1201 gatcactcgatgtggttccac 1221 ||||||||||||||||||||| Sbjct: 1318495 gatcactcgatgtggttccac 1318475
>gb|AC132154.3| Homo sapiens BAC clone RP11-523J2 from 2, complete sequence Length = 120590 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 28477 ctgcaaacaaagacaatttgg 28497
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence Length = 214838 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 4542 ctgcaaacaaagacaatttgg 4522
>gb|AC117462.5| Homo sapiens 3 BAC RP11-354H21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146853 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1428 tactttaatattttcttttcc 1448 ||||||||||||||||||||| Sbjct: 63067 tactttaatattttcttttcc 63047
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gctccccctcccgccccgccg 114 ||||||||||||||||||||| Sbjct: 68335 gctccccctcccgccccgccg 68315
>dbj|AK102908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113H11, full insert sequence Length = 3520 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gctccccctcccgccccgccg 114 ||||||||||||||||||||| Sbjct: 249 gctccccctcccgccccgccg 269
>emb|AL928791.10| Mouse DNA sequence from clone RP23-65N20 on chromosome 2, complete sequence Length = 210148 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 700 tttctaatagcaggagataat 720 ||||||||||||||||||||| Sbjct: 203842 tttctaatagcaggagataat 203822
>gb|AC139241.4| Mus musculus BAC clone RP24-79L4 from 3, complete sequence Length = 200361 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agctgctcccggtgctgctgt 87 ||||||||||||||||||||| Sbjct: 78314 agctgctcccggtgctgctgt 78334
>emb|CT005242.3| Pan troglodytes chromosome X clone PTB-112O07 map Xq28, complete sequence Length = 188913 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgcaaacaaagacaatttgg 492 ||||||||||||||||||||| Sbjct: 109175 ctgcaaacaaagacaatttgg 109155
>emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on chromosome 2, complete sequence Length = 236979 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1220 acaagcctgtcaaagctgatg 1240 ||||||||||||||||||||| Sbjct: 193040 acaagcctgtcaaagctgatg 193060
>gb|AC116860.15| Mus musculus chromosome 10, clone RP24-407B18, complete sequence Length = 193505 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 813 gttcactttaattgtttcttt 833 ||||||||||||||||||||| Sbjct: 121358 gttcactttaattgtttcttt 121338 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 316,242,997 Number of extensions: 17057639 Number of successful extensions: 355842 Number of sequences better than 10.0: 73 Number of HSP's gapped: 355832 Number of HSP's successfully gapped: 129 Length of query: 1674 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1651 Effective length of database: 18,503,978,556 Effective search space: 30550068595956 Effective search space used: 30550068595956 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
