ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6f04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK108410:Os02g0831700 | 58 | 1e-08 | 2 | AJ238116:Os02g0831700 | 58 | 1e-08 | 3 | AK105828:Os03g0708000 | 37 | 0.034 | 4 | Os08g0317200:Os08g0317200 | 32 | 0.65 | 5 | AK071135:Os03g0261100 | 30 | 2.5 | 6 | AJ238117:Os03g0261100 | 30 | 2.5 | 7 | AK100140:Os02g0832600 | 30 | 4.2 | 8 | AK072277:Os02g0832600 | 30 | 4.2 | 9 | AK058645:Os02g0832600 | 30 | 4.2 | 10 | AK102881:Os08g0372900 | 29 | 7.1 | 11 | AK073868:Os08g0372900 | 29 | 7.1 | 12 | AK063514:Os06g0244100 | 29 | 7.2 | 13 | AK073285: | 28 | 9.3 | 14 | AK108691:Os04g0553000 | 28 | 9.3 | 15 | AK101413:Os04g0553000 | 28 | 9.3 |
|---|
>AK108410:Os02g0831700 | Length = 138 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/40 (62%), Positives = 30/40 (75%) Frame = +1 Query: 829 DAVGIRYVGFMDVGWSSYD*EEPCDDLEAYCRNHKNCVRK 948 D+VGIRY + VGWS D EEPCDDL+A CR+H +CV K Sbjct: 39 DSVGIRYGKYCGVGWSGCDGEEPCDDLDACCRDHDHCVDK 78
>AJ238116:Os02g0831700 | Length = 138 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/40 (62%), Positives = 30/40 (75%) Frame = +1 Query: 829 DAVGIRYVGFMDVGWSSYD*EEPCDDLEAYCRNHKNCVRK 948 D+VGIRY + VGWS D EEPCDDL+A CR+H +CV K Sbjct: 39 DSVGIRYGKYCGVGWSGCDGEEPCDDLDACCRDHDHCVDK 78
>AK105828:Os03g0708000 | Length = 163 Score = 36.6 bits (83), Expect = 0.034 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +1 Query: 841 IRYVGFMDVGWSSYD*EEPCDDLEAYCRNHKNCVR 945 +RY + + +S E+PCD+L+A C +H NCV+ Sbjct: 70 LRYGKYCGILYSGCPGEQPCDELDACCMHHDNCVQ 104
>Os08g0317200:Os08g0317200 | Length = 365 Score = 32.3 bits (72), Expect = 0.65 Identities = 24/73 (32%), Positives = 33/73 (45%) Frame = -2 Query: 806 SIQRCNGEPISWSTSHKP*PHHRXXXXXTSLEDCLEACGVPGMWLTKGCWREDDAPRKSI 627 S+QR G IS ST+ P + +LED L AC + W KG W + A + Sbjct: 64 SLQRAMGTKISLSTAFHPQTDGQSERTIQTLEDMLRACVL--SW--KGNWEDHLALVEFA 119 Query: 626 LSNQYMNNTPWAP 588 +N Y + AP Sbjct: 120 YNNSYQASIKMAP 132
>AK071135:Os03g0261100 | Length = 153 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 841 IRYVGFMDVGWSSYD*EEPCDDLEAYCRNHKNCV 942 +RY + + +S E PCD L+A C H +CV Sbjct: 57 LRYGKYCGILYSGCPGERPCDALDACCMVHDHCV 90
>AJ238117:Os03g0261100 | Length = 153 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 841 IRYVGFMDVGWSSYD*EEPCDDLEAYCRNHKNCV 942 +RY + + +S E PCD L+A C H +CV Sbjct: 57 LRYGKYCGILYSGCPGERPCDALDACCMVHDHCV 90
>AK100140:Os02g0832600 | Length = 351 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -2 Query: 626 LSNQYMNNTPWAPRWMRNP*GGDGRASGHR*TTFPRAEAHA 504 L + + N A RW +N GG G G R FPR +A A Sbjct: 52 LGDLQVQNRAKARRWFKNQSGGGGGGGGPRKHFFPRPKAAA 92
>AK072277:Os02g0832600 | Length = 351 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -2 Query: 626 LSNQYMNNTPWAPRWMRNP*GGDGRASGHR*TTFPRAEAHA 504 L + + N A RW +N GG G G R FPR +A A Sbjct: 52 LGDLQVQNRAKARRWFKNQSGGGGGGGGPRKHFFPRPKAAA 92
>AK058645:Os02g0832600 | Length = 351 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -2 Query: 626 LSNQYMNNTPWAPRWMRNP*GGDGRASGHR*TTFPRAEAHA 504 L + + N A RW +N GG G G R FPR +A A Sbjct: 52 LGDLQVQNRAKARRWFKNQSGGGGGGGGPRKHFFPRPKAAA 92
>AK102881:Os08g0372900 | Length = 388 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 128 HPSRPCSYPSHRPPPRIISHSLYHPPDGTVRIRAPL 235 +P +P YPS PP + S S H R + PL Sbjct: 236 YPPQPVGYPSGGYPPAVYSDSYLHQGSRVAREQCPL 271
>AK073868:Os08g0372900 | Length = 388 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 128 HPSRPCSYPSHRPPPRIISHSLYHPPDGTVRIRAPL 235 +P +P YPS PP + S S H R + PL Sbjct: 236 YPPQPVGYPSGGYPPAVYSDSYLHQGSRVAREQCPL 271
>AK063514:Os06g0244100 | Length = 463 Score = 28.9 bits (63), Expect = 7.2 Identities = 20/84 (23%), Positives = 43/84 (51%) Frame = -1 Query: 741 SDNGDNNILGRLSRSLRRAWDVADQRMLARR*CPS*IHSEQPVHEQYTLGAAVDEESLRR 562 S + D++ G S+S W++ QR + P +HS + E ++G+ VDE+ + Sbjct: 309 SIDADSSSPGCSSKSSINNWNIDKQRKFPEK--PGFVHSAR---EDDSVGSQVDEKMVDT 363 Query: 561 GWTSIWSSLNHVPPSRSARLWSMV 490 + S++ + + P +++ SM+ Sbjct: 364 DFRSVFFNTANSPTCGASKAGSMI 387
>AK073285: | Length = 361 Score = 28.5 bits (62), Expect = 9.3 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%) Frame = -2 Query: 878 LLHPT-------SMNPTYRIPTASNHHRSQSSIQRCNGEPISWSTSHKP*P 747 LLH T S + ++R+PT+S+ S+ + + C G P+ S S + P Sbjct: 311 LLHKTKDMADGLSTSSSFRLPTSSSFRFSKQTDEECEGIPLRSSESFRSPP 361
>AK108691:Os04g0553000 | Length = 345 Score = 28.5 bits (62), Expect = 9.3 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +2 Query: 563 LLKDSSSTAAPKVYCSCTGCSEWIYEGHHLLANILWSATSQARRKLLDSLPRMLLSPLSD 742 LL+ S+T P + SCTG + HLL + S R+L +PR+ L+P Sbjct: 11 LLRPISATTHPLISLSCTGAGDSANHKSHLLFRLHHSC-----RRL--PVPRLSLTPAPT 63 Query: 743 GA 748 G+ Sbjct: 64 GS 65
>AK101413:Os04g0553000 | Length = 345 Score = 28.5 bits (62), Expect = 9.3 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +2 Query: 563 LLKDSSSTAAPKVYCSCTGCSEWIYEGHHLLANILWSATSQARRKLLDSLPRMLLSPLSD 742 LL+ S+T P + SCTG + HLL + S R+L +PR+ L+P Sbjct: 11 LLRPISATTHPLISLSCTGAGDSANHKSHLLFRLHHSC-----RRL--PVPRLSLTPAPT 63 Query: 743 GA 748 G+ Sbjct: 64 GS 65 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,032,518 Number of extensions: 713814 Number of successful extensions: 2478 Number of sequences better than 10.0: 15 Number of HSP's gapped: 2471 Number of HSP's successfully gapped: 15 Length of query: 383 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 281 Effective length of database: 11,315,673 Effective search space: 3179704113 Effective search space used: 3179704113 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
