ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf6f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6FTX0:CPD1_CANGA 2',3'-cyclic-nucleotide 3'-phosphodiesterase -... 34 0.99

>Q6FTX0:CPD1_CANGA 2',3'-cyclic-nucleotide 3'-phosphodiesterase - Candida glabrata|
           (Yeast) (Torulopsis glabrata)
          Length = 193
 Score = 34.3 bits (77), Expect = 0.99
 Identities = 23/86 (26%), Positives = 40/86 (46%)
 Frame = +2

Query: 446 WTHPSQGESHVELGITIDHRRALLLGGTWFNDDQMLVHPLLKDSSSTAAPKVYCSCTGCS 625
           W  P+ G    E+  T+ +   LL+ G+   +  + V   L+  +     KV  SC+ C 
Sbjct: 6   WYCPAPGTLDYEVLKTLINSLQLLVPGSPSFEPHLTVVTHLQVQNRGDVSKVLQSCSSCL 65

Query: 626 EWIYEGHHLLANILWSATSQARRKLL 703
           + I +GH L+    WS   Q  +K++
Sbjct: 66  KTIPKGHSLIKYSNWSINKQYFKKIV 91


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 178,980,056
Number of extensions: 3736669
Number of successful extensions: 9852
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9847
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 268
Effective length of database: 69,142,514
Effective search space: 18530193752
Effective search space used: 18530193752
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top