ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6e17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os05g0310600:Os05g0310600 | 98 | 8e-21 | 2 | Os08g0546900:Os08g0546900 | 62 | 6e-10 | 3 | AK105121:Os09g0526800 | 60 | 2e-09 | 4 | AK072174:Os09g0526800 | 60 | 2e-09 | 5 | AK060048:Os09g0526800 | 60 | 2e-09 | 6 | AK072962:Os05g0440100 | 55 | 6e-08 | 7 | AK059585:Os05g0440100 | 55 | 6e-08 | 8 | Os04g0464900:Os04g0464900 | 30 | 1.5 | 9 | Os11g0129800:Os11g0129800 | 29 | 3.3 | 10 | AK099438:Os05g0526300 | 29 | 3.3 | 11 | AK073555:Os01g0708300 | 29 | 3.4 | 12 | AK060040:Os01g0708300 | 29 | 3.4 | 13 | AK100409:Os02g0259100 | 29 | 4.4 | 14 | AK106687:Os06g0713300 | 28 | 5.7 | 15 | AK108217: | 28 | 9.7 | 16 | AK109801:Os01g0133100 | 28 | 9.7 | 17 | AK108760:Os01g0133100 | 28 | 9.7 |
|---|
>Os05g0310600:Os05g0310600 | Length = 281 Score = 97.8 bits (242), Expect = 8e-21 Identities = 52/77 (67%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = +3 Query: 117 RLPSPSAFIHPGHSSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVERLVE 296 +L S +A SSPLRFLTTSA GL +VTSGMYCVGRYVSD+GVRRDV+KVPVERLVE Sbjct: 179 QLASLTAAFSAVASSPLRFLTTSAGGLVVVTSGMYCVGRYVSDIGVRRDVVKVPVERLVE 238 Query: 297 HW-VNNVTPALPQGATQ 344 HW +V A PQ + Q Sbjct: 239 HWPPRDVAVAPPQESHQ 255
>Os08g0546900:Os08g0546900 | Length = 286 Score = 61.6 bits (148), Expect = 6e-10 Identities = 26/48 (54%), Positives = 35/48 (72%) Frame = +3 Query: 156 SSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVERLVEH 299 S+P + L G+A VT+GMYC GRY++D+GVR+DV+KV VE L H Sbjct: 193 STPFKLLAAGPLGMAAVTAGMYCAGRYITDIGVRKDVVKVEVENLSAH 240
>AK105121:Os09g0526800 | Length = 268 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/48 (52%), Positives = 34/48 (70%) Frame = +3 Query: 156 SSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVERLVEH 299 S+PL+ G+A VT+GMYC GRY++D+GVR+DV K+ VE L H Sbjct: 190 STPLKLFAAGPLGMATVTAGMYCAGRYITDIGVRKDVAKIEVENLSSH 237
>AK072174:Os09g0526800 | Length = 243 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/48 (52%), Positives = 34/48 (70%) Frame = +3 Query: 156 SSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVERLVEH 299 S+PL+ G+A VT+GMYC GRY++D+GVR+DV K+ VE L H Sbjct: 165 STPLKLFAAGPLGMATVTAGMYCAGRYITDIGVRKDVAKIEVENLSSH 212
>AK060048:Os09g0526800 | Length = 268 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/48 (52%), Positives = 34/48 (70%) Frame = +3 Query: 156 SSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVERLVEH 299 S+PL+ G+A VT+GMYC GRY++D+GVR+DV K+ VE L H Sbjct: 190 STPLKLFAAGPLGMATVTAGMYCAGRYITDIGVRKDVAKIEVENLSSH 237
>AK072962:Os05g0440100 | Length = 274 Score = 55.1 bits (131), Expect = 6e-08 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 11/71 (15%) Frame = +3 Query: 156 SSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVE-----------RLVEHW 302 S+P R +TT+ G+A++ G+YC RY +D+G RRDV+KV VE R VE+ Sbjct: 195 STPFRLVTTNIYGMAVMAVGVYCASRYAADIGNRRDVLKVEVEDLTAGLASGRIRAVENI 254 Query: 303 VNNVTPALPQG 335 V PA QG Sbjct: 255 SQLVAPAEAQG 265
>AK059585:Os05g0440100 | Length = 274 Score = 55.1 bits (131), Expect = 6e-08 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 11/71 (15%) Frame = +3 Query: 156 SSPLRFLTTSASGLAIVTSGMYCVGRYVSDMGVRRDVIKVPVE-----------RLVEHW 302 S+P R +TT+ G+A++ G+YC RY +D+G RRDV+KV VE R VE+ Sbjct: 195 STPFRLVTTNIYGMAVMAVGVYCASRYAADIGNRRDVLKVEVEDLTAGLASGRIRAVENI 254 Query: 303 VNNVTPALPQG 335 V PA QG Sbjct: 255 SQLVAPAEAQG 265
>Os04g0464900:Os04g0464900 | Length = 1000 Score = 30.4 bits (67), Expect = 1.5 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 703 LCLYEILRCKAGTFSQDLS-WHIFELNHVMSYKKKK 807 LC Y++L CK +FS LS H++ NH+ K K Sbjct: 449 LCAYDMLPCKGESFSASLSRGHMYAKNHLKIEKTDK 484
>Os11g0129800:Os11g0129800 | Length = 532 Score = 29.3 bits (64), Expect = 3.3 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 199 ARPLALVVRKRSGEECPGWMNADGDGNR 116 AR ++L R R + P W N DG G R Sbjct: 109 ARSVSLAPRGRGADSSPSWGNGDGGGGR 136
>AK099438:Os05g0526300 | Length = 308 Score = 29.3 bits (64), Expect = 3.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 495 YCRSSIWLCEDCCSIP 542 YCRS IWLC+ C+ P Sbjct: 236 YCRSVIWLCDLTCATP 251
>AK073555:Os01g0708300 | Length = 200 Score = 29.3 bits (64), Expect = 3.4 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +1 Query: 466 LKSKALFSCGIVVRRFGFVRIAAQFPYQCVPCSSSCKLIC 585 L+S LF V+ + GFV FP VP + SC + C Sbjct: 32 LESGILFGISSVISKTGFVMSEMGFPKIVVPAAISCSVGC 71
>AK060040:Os01g0708300 | Length = 292 Score = 29.3 bits (64), Expect = 3.4 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +1 Query: 466 LKSKALFSCGIVVRRFGFVRIAAQFPYQCVPCSSSCKLIC 585 L+S LF V+ + GFV FP VP + SC + C Sbjct: 175 LESGILFGISSVISKTGFVMSEMGFPKIVVPAAISCSVGC 214
>AK100409:Os02g0259100 | Length = 631 Score = 28.9 bits (63), Expect = 4.4 Identities = 12/37 (32%), Positives = 15/37 (40%) Frame = +2 Query: 203 CDKRHVLRGAICVRHGCSP*CDQGACGKACRALGEQC 313 C K R +C+ HG C Q CGK + C Sbjct: 349 CTKSAEGRSGLCIAHGGGRRCQQDGCGKGAQGSTNFC 385
>AK106687:Os06g0713300 | Length = 64 Score = 28.5 bits (62), Expect = 5.7 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +1 Query: 550 CVPCSSSCKLICLWKKLVDLAVTICCLIPLLACCMN 657 C+ C SSC L C + CCL +CC+N Sbjct: 34 CLNCCSSCCLYC---------CSSCCLYCCSSCCLN 60
>AK108217: | Length = 312 Score = 27.7 bits (60), Expect = 9.7 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +3 Query: 81 VAS*PSQATSPNRLPSPSAFIHPGHSSPLRFLTTSASGLAIVTSGM 218 +AS P+ PN P PSA H G + + F G+ I G+ Sbjct: 80 MASQPTHQMYPNIAPFPSAAAHMGAAPKVTFNLPQMGGMPIQPGGL 125
>AK109801:Os01g0133100 | Length = 661 Score = 27.7 bits (60), Expect = 9.7 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +3 Query: 96 SQATSPNRLPSPSAFIHPGHSSPLRFLTTSASGLAIVTSGMYCVGR 233 S +SP RLPSP HP P L+++A+ + G+ V R Sbjct: 52 SLRSSPRRLPSPPQASHP---PPAPRLSSAATAAGVAAPGVGVVAR 94
>AK108760:Os01g0133100 | Length = 654 Score = 27.7 bits (60), Expect = 9.7 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +3 Query: 96 SQATSPNRLPSPSAFIHPGHSSPLRFLTTSASGLAIVTSGMYCVGR 233 S +SP RLPSP HP P L+++A+ + G+ V R Sbjct: 52 SLRSSPRRLPSPPQASHP---PPAPRLSSAATAAGVAAPGVGVVAR 94 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,546,644 Number of extensions: 430403 Number of successful extensions: 1212 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1202 Number of HSP's successfully gapped: 17 Length of query: 269 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 170 Effective length of database: 11,435,796 Effective search space: 1944085320 Effective search space used: 1944085320 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
