ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3h10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102839:Os07g0668200 | 570 | e-162 | 2 | AK101682:Os07g0668200 | 570 | e-162 | 3 | AK059051:Os07g0668200 | 570 | e-162 | 4 | AK064146:Os07g0668200 | 282 | 5e-76 | 5 | AK107545:Os09g0248200 | 33 | 0.57 | 6 | AK103826:Os09g0248200 | 33 | 0.57 | 7 | AK060788:Os09g0248200 | 33 | 0.57 | 8 | Os05g0574800:Os05g0574800 | 33 | 0.75 | 9 | AK110313: | 33 | 0.75 | 10 | Os08g0238100:Os08g0238100 | 30 | 4.9 | 11 | Os03g0353600:Os03g0353600 | 30 | 4.9 | 12 | AK072352:Os05g0365500 | 30 | 4.9 | 13 | AK068323:Os11g0275400 | 30 | 4.9 | 14 | AK064442:Os01g0600400 | 29 | 8.3 |
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>AK102839:Os07g0668200 | Length = 413 Score = 570 bits (1468), Expect = e-162 Identities = 293/396 (73%), Positives = 328/396 (82%), Gaps = 9/396 (2%) Frame = +3 Query: 81 GLLSASHRGCAAGAEL-VLLPHLENGFPASRSS----PDHTRSFS----SHIPRTLLSQT 233 G+LSA GCAA A LLP L+ G P+S S P RSFS S +PR LLS + Sbjct: 19 GILSAPRPGCAALAGSGALLPRLD-GVPSSPSPSPAPPLLARSFSATSSSRLPRNLLSPS 77 Query: 234 VISQCRCKKSMCYHMTRAHLSTDSSGIDQPKESAEELYQKMLKSVEAQTMPPNAWLWSMI 413 + SQ R +KS+CYHM H ST++S IDQP E+ ELYQKMLKSVEA+TMPPNAWLWSMI Sbjct: 78 ISSQWRNEKSVCYHMAATHYSTEASDIDQPTEAVVELYQKMLKSVEAETMPPNAWLWSMI 137 Query: 414 SSCSSEEDIKLLFQILQKLRIFRLSNLRINANFNDHLCMKVSEACARVGVLDYGLKVLWN 593 SSCS++EDIKLL QILQKLR+FRLSNLRI+ANFNDHLCMKV+EACARVG LDYGLKVLW Sbjct: 138 SSCSNKEDIKLLIQILQKLRVFRLSNLRIDANFNDHLCMKVAEACARVGALDYGLKVLWK 197 Query: 594 HNVYGITPTIGSAHYLLQHAKEHNDTKLMEKIMQVLRRNSLPLQPGTADIVFGICYNTDR 773 HNVYGITPTIGSAHYLL+HAKE NDTKLM IMQVL+RNS+PLQPGTADIVF ICYN DR Sbjct: 198 HNVYGITPTIGSAHYLLKHAKEKNDTKLMGSIMQVLQRNSMPLQPGTADIVFSICYNADR 257 Query: 774 WDLLSKYAARFVQAGVKLRRTAFDVWMEFAAKVGDSQSIWNINSLRGKSIKHYTLTSGFA 953 WDLLSKYA RFV++ VKL +FD+WM+FAAKVGDSQSIWNINSLRGKS+K Y L +GFA Sbjct: 258 WDLLSKYARRFVKSEVKLHGASFDIWMDFAAKVGDSQSIWNINSLRGKSVKRYNLATGFA 317 Query: 954 CVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTEVIKRQKKDDRKAM 1133 CVKG LLERKPE+AAA IKLL+KH PD+KK V DELQKLVAEWP EVIKRQKKDDRKA+ Sbjct: 318 CVKGFLLERKPESAAAMIKLLHKHSPDEKKQLVTDELQKLVAEWPAEVIKRQKKDDRKAL 377 Query: 1134 EEALIEDIPKMITSMVNSGLDISVDLDKLTRQPEAA 1241 EEALI DIP+MI+SM LDISV+L+KLT QPE A Sbjct: 378 EEALITDIPQMISSMSKLRLDISVNLEKLTSQPETA 413
>AK101682:Os07g0668200 | Length = 413 Score = 570 bits (1468), Expect = e-162 Identities = 293/396 (73%), Positives = 328/396 (82%), Gaps = 9/396 (2%) Frame = +3 Query: 81 GLLSASHRGCAAGAEL-VLLPHLENGFPASRSS----PDHTRSFS----SHIPRTLLSQT 233 G+LSA GCAA A LLP L+ G P+S S P RSFS S +PR LLS + Sbjct: 19 GILSAPRPGCAALAGSGALLPRLD-GVPSSPSPSPAPPLLARSFSATSSSRLPRNLLSPS 77 Query: 234 VISQCRCKKSMCYHMTRAHLSTDSSGIDQPKESAEELYQKMLKSVEAQTMPPNAWLWSMI 413 + SQ R +KS+CYHM H ST++S IDQP E+ ELYQKMLKSVEA+TMPPNAWLWSMI Sbjct: 78 ISSQWRNEKSVCYHMAATHYSTEASDIDQPTEAVVELYQKMLKSVEAETMPPNAWLWSMI 137 Query: 414 SSCSSEEDIKLLFQILQKLRIFRLSNLRINANFNDHLCMKVSEACARVGVLDYGLKVLWN 593 SSCS++EDIKLL QILQKLR+FRLSNLRI+ANFNDHLCMKV+EACARVG LDYGLKVLW Sbjct: 138 SSCSNKEDIKLLIQILQKLRVFRLSNLRIDANFNDHLCMKVAEACARVGALDYGLKVLWK 197 Query: 594 HNVYGITPTIGSAHYLLQHAKEHNDTKLMEKIMQVLRRNSLPLQPGTADIVFGICYNTDR 773 HNVYGITPTIGSAHYLL+HAKE NDTKLM IMQVL+RNS+PLQPGTADIVF ICYN DR Sbjct: 198 HNVYGITPTIGSAHYLLKHAKEKNDTKLMGSIMQVLQRNSMPLQPGTADIVFSICYNADR 257 Query: 774 WDLLSKYAARFVQAGVKLRRTAFDVWMEFAAKVGDSQSIWNINSLRGKSIKHYTLTSGFA 953 WDLLSKYA RFV++ VKL +FD+WM+FAAKVGDSQSIWNINSLRGKS+K Y L +GFA Sbjct: 258 WDLLSKYARRFVKSEVKLHGASFDIWMDFAAKVGDSQSIWNINSLRGKSVKRYNLATGFA 317 Query: 954 CVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTEVIKRQKKDDRKAM 1133 CVKG LLERKPE+AAA IKLL+KH PD+KK V DELQKLVAEWP EVIKRQKKDDRKA+ Sbjct: 318 CVKGFLLERKPESAAAMIKLLHKHSPDEKKQLVTDELQKLVAEWPAEVIKRQKKDDRKAL 377 Query: 1134 EEALIEDIPKMITSMVNSGLDISVDLDKLTRQPEAA 1241 EEALI DIP+MI+SM LDISV+L+KLT QPE A Sbjct: 378 EEALITDIPQMISSMSKLRLDISVNLEKLTSQPETA 413
>AK059051:Os07g0668200 | Length = 413 Score = 570 bits (1468), Expect = e-162 Identities = 293/396 (73%), Positives = 328/396 (82%), Gaps = 9/396 (2%) Frame = +3 Query: 81 GLLSASHRGCAAGAEL-VLLPHLENGFPASRSS----PDHTRSFS----SHIPRTLLSQT 233 G+LSA GCAA A LLP L+ G P+S S P RSFS S +PR LLS + Sbjct: 19 GILSAPRPGCAALAGSGALLPRLD-GVPSSPSPSPAPPLLARSFSATSSSRLPRNLLSPS 77 Query: 234 VISQCRCKKSMCYHMTRAHLSTDSSGIDQPKESAEELYQKMLKSVEAQTMPPNAWLWSMI 413 + SQ R +KS+CYHM H ST++S IDQP E+ ELYQKMLKSVEA+TMPPNAWLWSMI Sbjct: 78 ISSQWRNEKSVCYHMAATHYSTEASDIDQPTEAVVELYQKMLKSVEAETMPPNAWLWSMI 137 Query: 414 SSCSSEEDIKLLFQILQKLRIFRLSNLRINANFNDHLCMKVSEACARVGVLDYGLKVLWN 593 SSCS++EDIKLL QILQKLR+FRLSNLRI+ANFNDHLCMKV+EACARVG LDYGLKVLW Sbjct: 138 SSCSNKEDIKLLIQILQKLRVFRLSNLRIDANFNDHLCMKVAEACARVGALDYGLKVLWK 197 Query: 594 HNVYGITPTIGSAHYLLQHAKEHNDTKLMEKIMQVLRRNSLPLQPGTADIVFGICYNTDR 773 HNVYGITPTIGSAHYLL+HAKE NDTKLM IMQVL+RNS+PLQPGTADIVF ICYN DR Sbjct: 198 HNVYGITPTIGSAHYLLKHAKEKNDTKLMGSIMQVLQRNSMPLQPGTADIVFSICYNADR 257 Query: 774 WDLLSKYAARFVQAGVKLRRTAFDVWMEFAAKVGDSQSIWNINSLRGKSIKHYTLTSGFA 953 WDLLSKYA RFV++ VKL +FD+WM+FAAKVGDSQSIWNINSLRGKS+K Y L +GFA Sbjct: 258 WDLLSKYARRFVKSEVKLHGASFDIWMDFAAKVGDSQSIWNINSLRGKSVKRYNLATGFA 317 Query: 954 CVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTEVIKRQKKDDRKAM 1133 CVKG LLERKPE+AAA IKLL+KH PD+KK V DELQKLVAEWP EVIKRQKKDDRKA+ Sbjct: 318 CVKGFLLERKPESAAAMIKLLHKHSPDEKKQLVTDELQKLVAEWPAEVIKRQKKDDRKAL 377 Query: 1134 EEALIEDIPKMITSMVNSGLDISVDLDKLTRQPEAA 1241 EEALI DIP+MI+SM LDISV+L+KLT QPE A Sbjct: 378 EEALITDIPQMISSMSKLRLDISVNLEKLTSQPETA 413
>AK064146:Os07g0668200 | Length = 178 Score = 282 bits (721), Expect = 5e-76 Identities = 138/178 (77%), Positives = 154/178 (86%) Frame = +3 Query: 708 NSLPLQPGTADIVFGICYNTDRWDLLSKYAARFVQAGVKLRRTAFDVWMEFAAKVGDSQS 887 NS+PLQPGTADIVF ICYN DRWDLLSKYA RFV++ VKL +FD+WM+FAAKVGDSQS Sbjct: 1 NSMPLQPGTADIVFSICYNADRWDLLSKYARRFVKSEVKLHGASFDIWMDFAAKVGDSQS 60 Query: 888 IWNINSLRGKSIKHYTLTSGFACVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQ 1067 IWNINSLRGKS+K Y L +GFACVKG LLERKPE+AAA IKLL+KH PD+KK V DELQ Sbjct: 61 IWNINSLRGKSVKRYNLATGFACVKGFLLERKPESAAAMIKLLHKHSPDEKKQLVTDELQ 120 Query: 1068 KLVAEWPTEVIKRQKKDDRKAMEEALIEDIPKMITSMVNSGLDISVDLDKLTRQPEAA 1241 KLVAEWP EVIKRQKKDDRKA+EEALI DIP+MI+SM LDISV+L+KLT QPE A Sbjct: 121 KLVAEWPAEVIKRQKKDDRKALEEALITDIPQMISSMSKLRLDISVNLEKLTSQPETA 178
>AK107545:Os09g0248200 | Length = 540 Score = 33.1 bits (74), Expect = 0.57 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = +3 Query: 915 KSIKHYTLTSGFACVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTE 1094 KS+ H+ V+ + ER+ A IK + +H D+K P D LQK V + Sbjct: 393 KSVPHFKTGKISLQVQNEMNERELSALKAAIKCIEEHKLDEKYPI--DLLQKRVIQ---- 446 Query: 1095 VIKRQKKDDRKAMEEA 1142 +++ K D R+A+E A Sbjct: 447 -LEKAKADKRRAVEAA 461
>AK103826:Os09g0248200 | Length = 545 Score = 33.1 bits (74), Expect = 0.57 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = +3 Query: 915 KSIKHYTLTSGFACVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTE 1094 KS+ H+ V+ + ER+ A IK + +H D+K P D LQK V + Sbjct: 393 KSVPHFKTGKISLQVQNEMNERELSALKAAIKCIEEHKLDEKYPI--DLLQKRVIQ---- 446 Query: 1095 VIKRQKKDDRKAMEEA 1142 +++ K D R+A+E A Sbjct: 447 -LEKAKADKRRAVEAA 461
>AK060788:Os09g0248200 | Length = 359 Score = 33.1 bits (74), Expect = 0.57 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = +3 Query: 915 KSIKHYTLTSGFACVKGSLLERKPENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTE 1094 KS+ H+ V+ + ER+ A IK + +H D+K P D LQK V + Sbjct: 207 KSVPHFKTGKISLQVQNEMNERELSALKAAIKCIEEHKLDEKYPI--DLLQKRVIQ---- 260 Query: 1095 VIKRQKKDDRKAMEEA 1142 +++ K D R+A+E A Sbjct: 261 -LEKAKADKRRAVEAA 275
>Os05g0574800:Os05g0574800 | Length = 870 Score = 32.7 bits (73), Expect = 0.75 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 1/161 (0%) Frame = +3 Query: 468 LRIFRLSNLRINANFNDHLCMKVSEACARVGVLDYGLKVLWNHNVYGITPTIGSAHYLLQ 647 L ++ L L N + +D ACA +G LD G+K+ G + A+ LL+ Sbjct: 384 LEVYALMELH-NVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442 Query: 648 -HAKEHNDTKLMEKIMQVLRRNSLPLQPGTADIVFGICYNTDRWDLLSKYAARFVQAGVK 824 +AK +K ++K ++V + + + ++ G C+N ++ L Y R++ VK Sbjct: 443 MYAK----SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEAL--YYFRYMLGHVK 496 Query: 825 LRRTAFDVWMEFAAKVGDSQSIWNINSLRGKSIKHYTLTSG 947 F + A G +S GK I Y L G Sbjct: 497 PNSVTFIAALSACAATGALRS--------GKEIHAYVLRCG 529
>AK110313: | Length = 566 Score = 32.7 bits (73), Expect = 0.75 Identities = 28/114 (24%), Positives = 42/114 (36%) Frame = -2 Query: 1335 PPSQKCSPRVSGVLQDLQLQHPGVQQWCSFSTLLQADG*ACRDPRKYQGLN*PLR*SSSG 1156 P Q P+ LQ LQ Q QQ + + + + G A + + G ++ Sbjct: 445 PAGQAAVPQYLLYLQQLQAQ----QQAAAAAAVFSSGGHAWQQQQAVDGSA-----GANA 495 Query: 1155 CPRSKLPPLPSCHLSSAS*SPQLAIRQQAFGVHLSQMVSSDQAGACKEVLWWQR 994 P P S L SP+ + QQ + Q A ++ LWWQR Sbjct: 496 APGGSAYPASSAGLPGVPGSPRYSSSQQLLQERIMMQRHMQQQQAAQQQLWWQR 549
>Os08g0238100:Os08g0238100 | Length = 631 Score = 30.0 bits (66), Expect = 4.9 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 11/94 (11%) Frame = +3 Query: 207 IPRTLLSQTVISQCR----------CKKSMCYHMTRAHLSTDSSGIDQPKESAEELYQKM 356 +P L V+S CR C K+M H + L S +D + L ++ Sbjct: 418 VPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAG--LLEEA 475 Query: 357 LKSVEAQTMPPNAWLW-SMISSCSSEEDIKLLFQ 455 ++ ++PPNA +W S++ SC +I + Q Sbjct: 476 WDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQ 509
>Os03g0353600:Os03g0353600 | Length = 2574 Score = 30.0 bits (66), Expect = 4.9 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Frame = +3 Query: 534 VSEACARVGVLDYGLKVLWN-HNVYGITPTIGSAHYLLQHAK-----EHNDTKLMEK 686 V+++C RV V YGLK+LWN N I +G Q K ++ K++EK Sbjct: 1700 VADSCQRVFV--YGLKILWNLENRAAIVSWVGDLTQAFQPPKPSPSRQYTQRKILEK 1754
>AK072352:Os05g0365500 | Length = 911 Score = 30.0 bits (66), Expect = 4.9 Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 1/156 (0%) Frame = +3 Query: 327 ESAEELYQKMLKSVEAQTMPPNAWLWS-MISSCSSEEDIKLLFQILQKLRIFRLSNLRIN 503 E AE+L+++M E +++ P+ + ++ ++ SC + Q K+ R + N Sbjct: 417 EEAEKLFEEM----ETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHGPKFN 472 Query: 504 ANFNDHLCMKVSEACARVGVLDYGLKVLWNHNVYGITPTIGSAHYLLQHAKEHNDTKLME 683 F + + ++EA G +D LKV I P + L+ + D Sbjct: 473 IGFFNRMFEGLTEA----GRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKAR 528 Query: 684 KIMQVLRRNSLPLQPGTADIVFGICYNTDRWDLLSK 791 +++ + + + P D V I N R + + K Sbjct: 529 ELVSDMAKGGVTPPPEFRDSVIDIFKNAGRQEEIEK 564
>AK068323:Os11g0275400 | Length = 530 Score = 30.0 bits (66), Expect = 4.9 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 11/94 (11%) Frame = +3 Query: 207 IPRTLLSQTVISQCR----------CKKSMCYHMTRAHLSTDSSGIDQPKESAEELYQKM 356 +P L V+S CR C K+M H + L S +D + L ++ Sbjct: 340 VPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAG--LLEEA 397 Query: 357 LKSVEAQTMPPNAWLW-SMISSCSSEEDIKLLFQ 455 ++ ++PPNA +W S++ SC +I + Q Sbjct: 398 WDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQ 431
>AK064442:Os01g0600400 | Length = 356 Score = 29.3 bits (64), Expect = 8.3 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +3 Query: 534 VSEACARVGVLDYG---LKVLWNHNVYGITPTIGSAHYLLQHAKEHNDTKLMEKIMQVLR 704 V AC+ G+LD G K+L +VYGITPT+ HY KL E + Sbjct: 202 VLSACSHAGLLDEGRRYFKLL--SSVYGITPTL--EHYACMVDILAKAGKLAEAESLI-- 255 Query: 705 RNSLPLQPGTA--DIVFGIC 758 N +PL P + + G C Sbjct: 256 -NEMPLTPDASLWKTILGAC 274 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 45,726,682 Number of extensions: 1036794 Number of successful extensions: 3107 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3104 Number of HSP's successfully gapped: 14 Length of query: 534 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 429 Effective length of database: 11,195,550 Effective search space: 4802890950 Effective search space used: 4802890950 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
