ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf3h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8K078:SO4A1_MOUSE Solute carrier organic anion transporter fami... 34 2.0
2P24719:MEK1_YEAST Meiosis-specific serine/threonine-protein kina... 34 2.0
3O74444:MU122_SCHPO Meiotically up-regulated gene 122 protein - S... 32 5.8
4Q82SD8:CLPB_NITEU Chaperone clpB - Nitrosomonas europaea 32 7.6
5P39636:ROCC_BACSU Amino-acid permease rocC - Bacillus subtilis 32 9.9
6Q24702:DVA1_DICVI DVA-1 polyprotein precursor - Dictyocaulus viv... 32 9.9
7Q8ND07:CN045_HUMAN Uncharacterized protein C14orf45 - Homo sapie... 32 9.9

>Q8K078:SO4A1_MOUSE Solute carrier organic anion transporter family member 4A1 - Mus|
            musculus (Mouse)
          Length = 723
 Score = 33.9 bits (76), Expect = 2.0
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = -3

Query: 1457 GFSELAALASTIHCLHPVHQTTMC----TRYYRF*PYRVTPIIPSHPA-KNVPLGYQVCC 1293
            G  +L A  + I+C  P H + +C    T YY       +P     PA     LG Q   
Sbjct: 498  GQLDLKAACNAIYCCQPKHYSPLCGSDGTMYY-------SPCYAGCPADAETDLGGQKVY 550

Query: 1292 RICSCSIQVSSSG 1254
            R CSC ++ +SSG
Sbjct: 551  RGCSCILEKASSG 563



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>P24719:MEK1_YEAST Meiosis-specific serine/threonine-protein kinase MEK1 -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 497

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 411 ISSCSSEEDIKLLFQILQKLRIFRLSNLRINANFNDHLCMKVSEACARVGVLDYGLKVLW 590
           ++S S  E + ++FQILQ L      ++       D++ +   E C R+ + D+G+    
Sbjct: 259 LTSMSETESLLIVFQILQALNYLHDQDIVHRDLKLDNILLCTPEPCTRIVLADFGIAKDL 318

Query: 591 NHNVYGITPTIGSAHY 638
           N N   +   +G+  Y
Sbjct: 319 NSNKERMHTVVGTPEY 334



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>O74444:MU122_SCHPO Meiotically up-regulated gene 122 protein - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 749

 Score = 32.3 bits (72), Expect = 5.8
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
 Frame = +3

Query: 255 KKSMCYHMTRAHLSTDSSGIDQPKESAEELYQKMLKSV--------------------EA 374
           KK+M  H TRAH  +  S I    E A+ L+++  KSV                      
Sbjct: 637 KKAMESHSTRAHRRSTESKISFDSE-ADSLFEEASKSVPEDPVSVFCDEESDESLRLRAE 695

Query: 375 QTMPPNAW---LWSMISSCSSEEDIKLLFQILQKLRIFR--LSNLRINA 506
           +T+  NA       M+   +SEE +K++F++LQ+ +  +  L++L  NA
Sbjct: 696 KTLVENALSENFTLMLGQSTSEESLKIIFELLQEPQFVQGFLAHLLSNA 744



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>Q82SD8:CLPB_NITEU Chaperone clpB - Nitrosomonas europaea|
          Length = 863

 Score = 32.0 bits (71), Expect = 7.6
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
 Frame = +3

Query: 987  ENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTE-VIKRQKKDDRKAMEEALIED--- 1154
            + AAA I++         KP V D+L + + +   E    R++KDD      AL+E+   
Sbjct: 395  DEAAARIRM-----EQDSKPEVMDKLDRRLIQLKIEREAVRKEKDDASKKRLALLEEEIS 449

Query: 1155 -----------IPKMITSMVNSGLDISVDLDKLTRQPEAA*RR 1250
                       I K   S      +I  +LDKL R+ EAA R+
Sbjct: 450  KLEREYADLDEILKAEKSRAKGSQEIKEELDKLRREEEAARRK 492



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>P39636:ROCC_BACSU Amino-acid permease rocC - Bacillus subtilis|
          Length = 470

 Score = 31.6 bits (70), Expect = 9.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 1314 GNIFGWVGWDNWCDTVGLEPIITCTHCCLVHWMKAV 1421
            G + GW+ W +W +TVGLE  +T     +  W+ +V
Sbjct: 90   GFMIGWLYWFSWANTVGLE--LTSAGILMQRWLPSV 123



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>Q24702:DVA1_DICVI DVA-1 polyprotein precursor - Dictyocaulus viviparus (Bovine|
            lungworm)
          Length = 1557

 Score = 31.6 bits (70), Expect = 9.9
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 987  ENAAATIKLLYKHLPDQKKPFVKDELQKLVAEWPTEVIKRQKKDDRKAMEEAL-IEDIPK 1163
            ++  A +K  Y  LP++KK  +K + +    +W  EV   ++ +D   M E+    D+ K
Sbjct: 451  DDVIAEVKKFYGLLPEEKKIELKAKFKSQCYDWVKEVATSEEMNDIMKMHESKNHSDLMK 510

Query: 1164 MITSMVN 1184
             +T + N
Sbjct: 511  RLTELEN 517



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>Q8ND07:CN045_HUMAN Uncharacterized protein C14orf45 - Homo sapiens (Human)|
          Length = 529

 Score = 31.6 bits (70), Expect = 9.9
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 630 AHYLLQHAKEHNDTKLMEKIMQVLRRNS--LPLQPGTADIVFGICYNTDRWD 779
           +H LL H KE ND  + EKIMQ++++ S    LQ    ++   + Y T  ++
Sbjct: 256 SHTLLLHQKEINDLLVKEKIMQLVQQRSQIQTLQKKVVNLETALSYMTKEFE 307


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 278,148,198
Number of extensions: 6064717
Number of successful extensions: 16881
Number of sequences better than 10.0: 7
Number of HSP's gapped: 16871
Number of HSP's successfully gapped: 7
Length of query: 534
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 416
Effective length of database: 68,319,629
Effective search space: 28420965664
Effective search space used: 28420965664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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