No.
Definition
Score (bits)
E Value
1 emb|CT833447.1| Oryza sativa (indica cultivar-group) cDNA clone:...
214
3e-52
2 gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece
159
1e-35
3 gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC...
159
1e-35
4 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
109
1e-20
5 dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D...
109
1e-20
6 dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D...
109
1e-20
7 dbj|AK060239.1| Oryza sativa (japonica cultivar-group) cDNA clon...
109
1e-20
8 ref|NM_116336.2| Arabidopsis thaliana DNA binding / transcriptio...
52
0.002
9 ref|NM_001036490.1| Arabidopsis thaliana DNA binding / transcrip...
52
0.002
10 ref|NM_202764.1| Arabidopsis thaliana DNA binding / transcriptio...
52
0.002
11 gb|AY519522.1| Arabidopsis thaliana MYB transcription factor (At...
52
0.002
12 gb|BT005611.1| Arabidopsis thaliana clone U50786 putative myb fa...
52
0.002
13 dbj|AK118043.1| Arabidopsis thaliana mRNA for unknown protein, c...
52
0.002
14 emb|BX828755.1|CNS0A2LX Arabidopsis thaliana Full-length cDNA Co...
52
0.002
15 emb|BX826597.1|CNS0A37B Arabidopsis thaliana Full-length cDNA Co...
48
0.034
16 gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, com...
44
0.53
17 emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c...
44
0.53
18 gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01
44
0.53
19 ref|XM_001009025.1| Tetrahymena thermophila SB210 Protein kinase...
42
2.1
20 gb|BC090666.1| Mus musculus mitogen-activated protein kinase kin...
42
2.1
21 gb|DQ469713.1| Hordeum vulgare subsp. vulgare serine/threonine k...
42
2.1
22 ref|XM_390467.1| Gibberella zeae PH-1 chromosome 1 hypothetical ...
42
2.1
23 gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, co...
42
2.1
24 dbj|AK041800.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f...
42
2.1
25 dbj|AK048222.1| Mus musculus 16 days embryo head cDNA, RIKEN ful...
42
2.1
26 ref|XM_696979.1| PREDICTED: Danio rerio hypothetical protein LOC...
42
2.1
27 ref|NM_025729.3| Mus musculus mitogen-activated protein kinase k...
42
2.1
28 ref|NM_199666.1| Danio rerio Nedd4 family interacting protein 1 ...
42
2.1
29 emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 i...
42
2.1
30 emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in ...
42
2.1
31 gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, c...
42
2.1
32 emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chro...
42
2.1
33 gb|AC190216.1| Gallus gallus chromosome Z clone CH261-94K8, comp...
40
8.3
34 gb|DQ822946.1| Glycine max MYB transcription factor MYB172 (MYB1...
40
8.3
35 gb|DQ822927.1| Glycine max MYB transcription factor MYB73 (MYB73...
40
8.3
36 emb|CR932078.6| Zebrafish DNA sequence from clone DKEY-16O23 in ...
40
8.3
37 dbj|AB234211.1| Ipomoea nil InMYB2 mRNA for R2R3-MYB transcripti...
40
8.3
38 ref|XM_642468.1| Dictyostelium discoideum AX4 hypothetical prote...
40
8.3
39 gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete se...
40
8.3
40 gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome
40
8.3
41 emb|AL032649.1|CEY55D9A Caenorhabditis elegans YAC Y55D9A, compl...
40
8.3
42 emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 o...
40
8.3
43 emb|AL357123.11| Human DNA sequence from clone RP11-287E6 on chr...
40
8.3
44 emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chr...
40
8.3
45 emb|X65054.1|CEPGPAG C.elegans cepgpA gene for P-glycoprotein A
40
8.3
46 emb|X57841.1|SSSPAGEN S.sobrinus spaA gene for antigen I/II
40
8.3
47 emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 ...
40
8.3
48 emb|BX821764.1|CNS0AA9S Arabidopsis thaliana Full-length cDNA Co...
40
8.3
49 emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 ma...
40
8.3
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 109 bits (55), Expect = 1e-20
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 239 caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
|||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 24692908 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 24692849
Query: 299 ctgggcaaaaaagcaccag 317
||||||| ||||||||||
Sbjct: 24692848 ctgggcagtaaagcaccag 24692830
Score = 101 bits (51), Expect = 3e-18
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 240 aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
|||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 24639421 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 24639362
Query: 300 tgggcaa 306
|||||||
Sbjct: 24639361 tgggcaa 24639355
Score = 101 bits (51), Expect = 3e-18
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 240 aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 24666459 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 24666400
Query: 300 tgg 302
|||
Sbjct: 24666399 tgg 24666397
Score = 95.6 bits (48), Expect = 2e-16
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
||||||||||| || ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 24693187 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 24693128
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
||||||||||||||| ||||| ||||||||||
Sbjct: 24693127 tttcagaatgcacaggcttgttgggaacaggt 24693096
Score = 89.7 bits (45), Expect = 1e-14
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 175 attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 234
|||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 24639671 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 24639612
Query: 235 ggaacaggt 243
|||||||||
Sbjct: 24639611 ggaacaggt 24639603
Score = 87.7 bits (44), Expect = 4e-14
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
|||||||||||||| ||| || |||||||| ||||||| | | |||||||||||||||
Sbjct: 24673894 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 24673835
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
| ||||||||||||| ||||| ||||||||||
Sbjct: 24673834 tatcagaatgcacaggcttgttgggaacaggt 24673803
>dbj|AP003328.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1040D09
Length = 148102
Score = 109 bits (55), Expect = 1e-20
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 239 caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
|||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 118871 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 118812
Query: 299 ctgggcaaaaaagcaccag 317
||||||| ||||||||||
Sbjct: 118811 ctgggcagtaaagcaccag 118793
Score = 101 bits (51), Expect = 3e-18
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 240 aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
|||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 65384 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 65325
Query: 300 tgggcaa 306
|||||||
Sbjct: 65324 tgggcaa 65318
Score = 101 bits (51), Expect = 3e-18
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 240 aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 92422 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 92363
Query: 300 tgg 302
|||
Sbjct: 92362 tgg 92360
Score = 95.6 bits (48), Expect = 2e-16
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
||||||||||| || ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 119150 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 119091
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
||||||||||||||| ||||| ||||||||||
Sbjct: 119090 tttcagaatgcacaggcttgttgggaacaggt 119059
Score = 89.7 bits (45), Expect = 1e-14
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 175 attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 234
|||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 65634 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 65575
Query: 235 ggaacaggt 243
|||||||||
Sbjct: 65574 ggaacaggt 65566
Score = 87.7 bits (44), Expect = 4e-14
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
|||||||||||||| ||| || |||||||| ||||||| | | |||||||||||||||
Sbjct: 99857 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 99798
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
| ||||||||||||| ||||| ||||||||||
Sbjct: 99797 tatcagaatgcacaggcttgttgggaacaggt 99766
>dbj|AP002843.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0407B12
Length = 148762
Score = 109 bits (55), Expect = 1e-20
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 239 caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
|||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 61485 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 61426
Query: 299 ctgggcaaaaaagcaccag 317
||||||| ||||||||||
Sbjct: 61425 ctgggcagtaaagcaccag 61407
Score = 101 bits (51), Expect = 3e-18
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 240 aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
|||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 7998 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 7939
Query: 300 tgggcaa 306
|||||||
Sbjct: 7938 tgggcaa 7932
Score = 101 bits (51), Expect = 3e-18
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 240 aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 35036 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 34977
Query: 300 tgg 302
|||
Sbjct: 34976 tgg 34974
Score = 95.6 bits (48), Expect = 2e-16
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
||||||||||| || ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 61764 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 61705
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
||||||||||||||| ||||| ||||||||||
Sbjct: 61704 tttcagaatgcacaggcttgttgggaacaggt 61673
Score = 89.7 bits (45), Expect = 1e-14
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 175 attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 234
|||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 8248 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 8189
Query: 235 ggaacaggt 243
|||||||||
Sbjct: 8188 ggaacaggt 8180
Score = 87.7 bits (44), Expect = 4e-14
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
|||||||||||||| ||| || |||||||| ||||||| | | |||||||||||||||
Sbjct: 42471 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 42412
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
| ||||||||||||| ||||| ||||||||||
Sbjct: 42411 tatcagaatgcacaggcttgttgggaacaggt 42380
>emb|Z92542.2 |HS245G19 Human DNA sequence from clone RP1-245G19 on chromosome Xp22.11-22.2
Contains the 3' end of the CDKL5 gene for cyclin-dependent
kinase-like 5, the 3' end of the RS1 gene for retinoschisis
(X-linked, juvenile) 1, and a gap junction protein, alpha
2, 38kDa (connexin 38) (GJA2) pseudogene, complete sequence
Length = 145538
Score = 40.1 bits (20), Expect = 8.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 322 aatgaaagggaaagcaggat 341
||||||||||||||||||||
Sbjct: 138899 aatgaaagggaaagcaggat 138880
>emb|CT025634.2 | Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete sequence
Length = 145822
Score = 40.1 bits (20), Expect = 8.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 322 aatgaaagggaaagcaggat 341
||||||||||||||||||||
Sbjct: 124981 aatgaaagggaaagcaggat 125000
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 118,768,849
Number of extensions: 7212882
Number of successful extensions: 149097
Number of sequences better than 10.0: 49
Number of HSP's gapped: 149094
Number of HSP's successfully gapped: 66
Length of query: 563
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 541
Effective length of database: 18,508,616,841
Effective search space: 10013161710981
Effective search space used: 10013161710981
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)