ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf6c21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT833447.1| Oryza sativa (indica cultivar-group) cDNA clone:... 214 3e-52
2gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece 159 1e-35
3gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 159 1e-35
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
6dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
7dbj|AK060239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
8ref|NM_116336.2| Arabidopsis thaliana DNA binding / transcriptio... 52 0.002
9ref|NM_001036490.1| Arabidopsis thaliana DNA binding / transcrip... 52 0.002
10ref|NM_202764.1| Arabidopsis thaliana DNA binding / transcriptio... 52 0.002
11gb|AY519522.1| Arabidopsis thaliana MYB transcription factor (At... 52 0.002
12gb|BT005611.1| Arabidopsis thaliana clone U50786 putative myb fa... 52 0.002
13dbj|AK118043.1| Arabidopsis thaliana mRNA for unknown protein, c... 52 0.002
14emb|BX828755.1|CNS0A2LX Arabidopsis thaliana Full-length cDNA Co... 52 0.002
15emb|BX826597.1|CNS0A37B Arabidopsis thaliana Full-length cDNA Co... 48 0.034
16gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, com... 44 0.53
17emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c... 44 0.53
18gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01 44 0.53
19ref|XM_001009025.1| Tetrahymena thermophila SB210 Protein kinase... 42 2.1
20gb|BC090666.1| Mus musculus mitogen-activated protein kinase kin... 42 2.1
21gb|DQ469713.1| Hordeum vulgare subsp. vulgare serine/threonine k... 42 2.1
22ref|XM_390467.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 2.1
23gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, co... 42 2.1
24dbj|AK041800.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 2.1
25dbj|AK048222.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 2.1
26ref|XM_696979.1| PREDICTED: Danio rerio hypothetical protein LOC... 42 2.1
27ref|NM_025729.3| Mus musculus mitogen-activated protein kinase k... 42 2.1
28ref|NM_199666.1| Danio rerio Nedd4 family interacting protein 1 ... 42 2.1
29emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 i... 42 2.1
30emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in ... 42 2.1
31gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, c... 42 2.1
32emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chro... 42 2.1
33gb|AC190216.1| Gallus gallus chromosome Z clone CH261-94K8, comp... 40 8.3
34gb|DQ822946.1| Glycine max MYB transcription factor MYB172 (MYB1... 40 8.3
35gb|DQ822927.1| Glycine max MYB transcription factor MYB73 (MYB73... 40 8.3
36emb|CR932078.6| Zebrafish DNA sequence from clone DKEY-16O23 in ... 40 8.3
37dbj|AB234211.1| Ipomoea nil InMYB2 mRNA for R2R3-MYB transcripti... 40 8.3
38ref|XM_642468.1| Dictyostelium discoideum AX4 hypothetical prote... 40 8.3
39gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete se... 40 8.3
40gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome 40 8.3
41emb|AL032649.1|CEY55D9A Caenorhabditis elegans YAC Y55D9A, compl... 40 8.3
42emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 o... 40 8.3
43emb|AL357123.11| Human DNA sequence from clone RP11-287E6 on chr... 40 8.3
44emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chr... 40 8.3
45emb|X65054.1|CEPGPAG C.elegans cepgpA gene for P-glycoprotein A 40 8.3
46emb|X57841.1|SSSPAGEN S.sobrinus spaA gene for antigen I/II 40 8.3
47emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 ... 40 8.3
48emb|BX821764.1|CNS0AA9S Arabidopsis thaliana Full-length cDNA Co... 40 8.3
49emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 ma... 40 8.3

>emb|CT833447.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029N02, full
           insert sequence
          Length = 536
 Score =  214 bits (108), Expect = 3e-52
 Identities = 159/176 (90%)
 Strand = Plus / Plus

                                                                       
Query: 142 gtgaaagaaaagaagttaatagcaacgcaaagcattttgttgatttcacggaggcagagg 201
           |||||| |||||||||||||| ||  ||| || |||||||| |||||||||| | |||||
Sbjct: 150 gtgaaacaaaagaagttaataacactgcacagaattttgttcatttcacggaagaagagg 209

                                                                       
Query: 202 aagatcttgttttcagaatgcacagacttgtcgggaacaggtgggaacttatagctggaa 261
           ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 210 aagatctcgttttcagaatgcacaggcttgttgggaacaggtgggaacttatagctggaa 269

                                                                   
Query: 262 gaatccccggaagaacagcagaagaagtagagatgttctgggcaaaaaagcaccag 317
           ||||||| |||||||||||| |||||||||| ||||||||||||  ||||||||||
Sbjct: 270 gaatccctggaagaacagcaaaagaagtagaaatgttctgggcagtaaagcaccag 325



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>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece
          Length = 120562

 Score =  159 bits (80), Expect = 1e-35
 Identities = 102/108 (94%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                         
Query: 442   tgttaggaataagcaacttgtattcccatgaggccataggccgatatatatacatgtaca 501
             ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 58439 tgttaggaatatgcaacttgtattcccatgaggccataggccggtatatatacatgtaca 58380

                                                             
Query: 502   ggtgatgggctatatgcaggaaaacaccttatatattgggataaatac 549
             |||| ||| ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 58379 ggtggtggactatatgcagg-aaaccccttatatattgggataaatac 58333



 Score =  143 bits (72), Expect = 8e-31
 Identities = 97/104 (93%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                         
Query: 442   tgttaggaataagcaacttgtattcccatgaggccataggccgatatatatacatgtaca 501
             ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 53982 tgttaggaatatgcaacttgtattcccataaggccataggccggtatatatacatgtaca 53923

                                                         
Query: 502   ggtgatgggctatatgcaggaaaacaccttatatattgggataa 545
             |||| ||| ||||||||||| |||| ||||||||||||||||||
Sbjct: 53922 ggtggtggactatatgcagg-aaaccccttatatattgggataa 53880



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>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score =  159 bits (80), Expect = 1e-35
 Identities = 102/108 (94%), Gaps = 1/108 (0%)
 Strand = Plus / Plus

                                                                         
Query: 442   tgttaggaataagcaacttgtattcccatgaggccataggccgatatatatacatgtaca 501
             |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
Sbjct: 47090 tgttaggaataagcaacttgtattcc-atgaggccataggccggtatatatacatgtata 47148

                                                             
Query: 502   ggtgatgggctatatgcaggaaaacaccttatatattgggataaatac 549
             |||||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 47149 ggtgatggactatatggaggaaaaccccttatatattgggataaatac 47196



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                            
Query: 239      caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
                |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 24692908 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 24692849

                                   
Query: 299      ctgggcaaaaaagcaccag 317
                |||||||  ||||||||||
Sbjct: 24692848 ctgggcagtaaagcaccag 24692830



 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 240      aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
                |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 24639421 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 24639362

                       
Query: 300      tgggcaa 306
                |||||||
Sbjct: 24639361 tgggcaa 24639355



 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                            
Query: 240      aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
                |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 24666459 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 24666400

                   
Query: 300      tgg 302
                |||
Sbjct: 24666399 tgg 24666397



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 152      agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
                ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 24693187 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 24693128

                                                
Query: 212      tttcagaatgcacagacttgtcgggaacaggt 243
                ||||||||||||||| ||||| ||||||||||
Sbjct: 24693127 tttcagaatgcacaggcttgttgggaacaggt 24693096



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 175      attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 234
                |||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 24639671 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 24639612

                         
Query: 235      ggaacaggt 243
                |||||||||
Sbjct: 24639611 ggaacaggt 24639603



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                            
Query: 152      agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
                ||||||||||||||  ||| || |||||||| |||||||  | | |||||||||||||||
Sbjct: 24673894 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 24673835

                                                
Query: 212      tttcagaatgcacagacttgtcgggaacaggt 243
                | ||||||||||||| ||||| ||||||||||
Sbjct: 24673834 tatcagaatgcacaggcttgttgggaacaggt 24673803



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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1040D09
          Length = 148102

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                          
Query: 239    caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
              |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 118871 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 118812

                                 
Query: 299    ctgggcaaaaaagcaccag 317
              |||||||  ||||||||||
Sbjct: 118811 ctgggcagtaaagcaccag 118793



 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 240   aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
             |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 65384 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 65325

                    
Query: 300   tgggcaa 306
             |||||||
Sbjct: 65324 tgggcaa 65318



 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 240   aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
             |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 92422 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 92363

                
Query: 300   tgg 302
             |||
Sbjct: 92362 tgg 92360



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                          
Query: 152    agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
              ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 119150 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 119091

                                              
Query: 212    tttcagaatgcacagacttgtcgggaacaggt 243
              ||||||||||||||| ||||| ||||||||||
Sbjct: 119090 tttcagaatgcacaggcttgttgggaacaggt 119059



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 175   attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 234
             |||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 65634 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 65575

                      
Query: 235   ggaacaggt 243
             |||||||||
Sbjct: 65574 ggaacaggt 65566



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                         
Query: 152   agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
             ||||||||||||||  ||| || |||||||| |||||||  | | |||||||||||||||
Sbjct: 99857 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 99798

                                             
Query: 212   tttcagaatgcacagacttgtcgggaacaggt 243
             | ||||||||||||| ||||| ||||||||||
Sbjct: 99797 tatcagaatgcacaggcttgttgggaacaggt 99766



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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 239   caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
             |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 61485 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 61426

                                
Query: 299   ctgggcaaaaaagcaccag 317
             |||||||  ||||||||||
Sbjct: 61425 ctgggcagtaaagcaccag 61407



 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                        
Query: 240  aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
            |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 7998 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 7939

                   
Query: 300  tgggcaa 306
            |||||||
Sbjct: 7938 tgggcaa 7932



 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 240   aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 299
             |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 35036 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 34977

                
Query: 300   tgg 302
             |||
Sbjct: 34976 tgg 34974



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 152   agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
             ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 61764 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 61705

                                             
Query: 212   tttcagaatgcacagacttgtcgggaacaggt 243
             ||||||||||||||| ||||| ||||||||||
Sbjct: 61704 tttcagaatgcacaggcttgttgggaacaggt 61673



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 175  attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 234
            |||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 8248 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 8189

                     
Query: 235  ggaacaggt 243
            |||||||||
Sbjct: 8188 ggaacaggt 8180



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                         
Query: 152   agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
             ||||||||||||||  ||| || |||||||| |||||||  | | |||||||||||||||
Sbjct: 42471 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 42412

                                             
Query: 212   tttcagaatgcacagacttgtcgggaacaggt 243
             | ||||||||||||| ||||| ||||||||||
Sbjct: 42411 tatcagaatgcacaggcttgttgggaacaggt 42380



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>dbj|AK060239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-D06, full
            insert sequence
          Length = 1262

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                        
Query: 239  caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 298
            |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 996  caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 1055

                               
Query: 299  ctgggcaaaaaagcaccag 317
            |||||||  ||||||||||
Sbjct: 1056 ctgggcagtaaagcaccag 1074



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 152 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 211
           ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 717 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 776

                                           
Query: 212 tttcagaatgcacagacttgtcgggaacaggt 243
           ||||||||||||||| ||||| ||||||||||
Sbjct: 777 tttcagaatgcacaggcttgttgggaacaggt 808



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>ref|NM_116336.2| Arabidopsis thaliana DNA binding / transcription factor (AT4G01060)
           mRNA, complete cds
          Length = 341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 147 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 196



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>ref|NM_001036490.1| Arabidopsis thaliana DNA binding / transcription factor (AT4G01060)
           mRNA, complete cds
          Length = 388

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 247



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>ref|NM_202764.1| Arabidopsis thaliana DNA binding / transcription factor (AT4G01060)
           mRNA, complete cds
          Length = 405

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 247



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>gb|AY519522.1| Arabidopsis thaliana MYB transcription factor (At4g01060) mRNA,
           complete cds
          Length = 228

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 139 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 188



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>gb|BT005611.1| Arabidopsis thaliana clone U50786 putative myb family transcription
           factor (At4g01060) mRNA, complete cds
          Length = 265

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 145 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 194



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>dbj|AK118043.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
           RAFL19-27-F14
          Length = 341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 147 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 196



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>emb|BX828755.1|CNS0A2LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL36ZE02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 405

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 228 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 247



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>emb|BX826597.1|CNS0A37B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB45ZF07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 388

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 238 acaggtgggaacttatagctggaagaatccccggaagaac 277
           ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 208 acaggtgggaactgatagctgggaggatcccaggaagaac 247



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>gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, complete sequence
          Length = 174779

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 430    catgctaaaagctgttaggaat 451
              ||||||||||||||||||||||
Sbjct: 126564 catgctaaaagctgttaggaat 126543



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>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
          Length = 196149

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 240   aggtgggaacttatagctggaagaatccccggaagaac 277
             ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 74604 aggtgggaactgatagctgggaggatcccaggaagaac 74641



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>gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01
          Length = 124225

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 240    aggtgggaacttatagctggaagaatccccggaagaac 277
              ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 113091 aggtgggaactgatagctgggaggatcccaggaagaac 113054



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>ref|XM_001009025.1| Tetrahymena thermophila SB210 Protein kinase domain containing
            protein (TTHERM_00260780) mRNA, complete cds
          Length = 6807

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 350  taaaactagattgacatatag 370
            |||||||||||||||||||||
Sbjct: 2259 taaaactagattgacatatag 2279



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>gb|BC090666.1| Mus musculus mitogen-activated protein kinase kinase kinase 7
           interacting protein 3, mRNA (cDNA clone IMAGE:30685299)
          Length = 3630

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 370 gggtgctttttcctgtccatc 390
           |||||||||||||||||||||
Sbjct: 168 gggtgctttttcctgtccatc 148



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>gb|DQ469713.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein
             ABC1040 gene, complete cds
          Length = 21799

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 485   atatatatacatgtacaggtg 505
             |||||||||||||||||||||
Sbjct: 13211 atatatatacatgtacaggtg 13231



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>ref|XM_390467.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10291.1)
           partial mRNA
          Length = 2085

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 268 ccggaagaacagcagaagaag 288
           |||||||||||||||||||||
Sbjct: 509 ccggaagaacagcagaagaag 529



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>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence
          Length = 156293

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   tcttgttttcagaatgcacag 226
             |||||||||||||||||||||
Sbjct: 47292 tcttgttttcagaatgcacag 47272



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>dbj|AK041800.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630039A19 product:inferred: RIKEN cDNA
           4921526G09 gene, full insert sequence
          Length = 1173

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 370 gggtgctttttcctgtccatc 390
           |||||||||||||||||||||
Sbjct: 653 gggtgctttttcctgtccatc 633



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>dbj|AK048222.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130041B08 product:hypothetical protein,
           full insert sequence
          Length = 3530

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 370 gggtgctttttcctgtccatc 390
           |||||||||||||||||||||
Sbjct: 100 gggtgctttttcctgtccatc 80



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>ref|XM_696979.1| PREDICTED: Danio rerio hypothetical protein LOC555019 (LOC555019),
           mRNA
          Length = 1079

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 262 gaatccccggaagaacagcag 282
           |||||||||||||||||||||
Sbjct: 27  gaatccccggaagaacagcag 7



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>ref|NM_025729.3| Mus musculus mitogen-activated protein kinase kinase kinase 7
            interacting protein 3 (Map3k7ip3), mRNA
 dbj|AK220185.1| Mus musculus mRNA for mKIAA4135 protein
          Length = 6209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 370  gggtgctttttcctgtccatc 390
            |||||||||||||||||||||
Sbjct: 2920 gggtgctttttcctgtccatc 2900



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>ref|NM_199666.1| Danio rerio Nedd4 family interacting protein 1 (ndfip1), mRNA
 gb|BC044423.1| Danio rerio Nedd4 family interacting protein 1, mRNA (cDNA clone
           MGC:55546 IMAGE:2642703), complete cds
          Length = 1805

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 262 gaatccccggaagaacagcag 282
           |||||||||||||||||||||
Sbjct: 714 gaatccccggaagaacagcag 694



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>emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 in linkage group 14,
             complete sequence
          Length = 201228

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   gaatccccggaagaacagcag 282
             |||||||||||||||||||||
Sbjct: 62300 gaatccccggaagaacagcag 62280



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>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14,
             complete sequence
          Length = 227326

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   gaatccccggaagaacagcag 282
             |||||||||||||||||||||
Sbjct: 53664 gaatccccggaagaacagcag 53644



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>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence
          Length = 189238

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   tcttgttttcagaatgcacag 226
             |||||||||||||||||||||
Sbjct: 83975 tcttgttttcagaatgcacag 83995



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>emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chromosome X, complete
             sequence
          Length = 111339

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   gggtgctttttcctgtccatc 390
             |||||||||||||||||||||
Sbjct: 29673 gggtgctttttcctgtccatc 29653



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>gb|AC190216.1| Gallus gallus chromosome Z clone CH261-94K8, complete sequence
          Length = 208443

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    agcagaagaagtagagatgt 297
              ||||||||||||||||||||
Sbjct: 192027 agcagaagaagtagagatgt 192046



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>gb|DQ822946.1| Glycine max MYB transcription factor MYB172 (MYB172) mRNA, complete
           cds
          Length = 530

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 255 gctggaagaatccccggaagaacagcagaagaagtagaga 294
           |||||||| || || |||||||||||||| ||| ||||||
Sbjct: 147 gctggaaggattcctggaagaacagcagaggaaatagaga 186



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>gb|DQ822927.1| Glycine max MYB transcription factor MYB73 (MYB73) mRNA, complete
           cds
          Length = 570

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gctggaagaatccccggaagaacagcagaaga 286
           ||||||||||| || |||||||| ||||||||
Sbjct: 205 gctggaagaattcctggaagaactgcagaaga 236



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>emb|CR932078.6| Zebrafish DNA sequence from clone DKEY-16O23 in linkage group 12,
             complete sequence
          Length = 63441

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 331   gaaagcaggatgcatccagtaaaa 354
             |||| |||||||||||||||||||
Sbjct: 34996 gaaatcaggatgcatccagtaaaa 35019



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>dbj|AB234211.1| Ipomoea nil InMYB2 mRNA for R2R3-MYB transcriptional regulator,
           complete cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 237 aacaggtgggaacttatagctggaagaatccccggaagaacagc 280
           |||||||||  |||||| || || |||||||| |||||||||||
Sbjct: 351 aacaggtggtcacttattgccggcagaatcccaggaagaacagc 394



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>ref|XM_642468.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0189785)
            mRNA, complete cds
          Length = 1113

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  gtgaaagaaaagaagttaat 161
            ||||||||||||||||||||
Sbjct: 995  gtgaaagaaaagaagttaat 1014



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>gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete sequence
          Length = 186585

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    tatatatacatgtacaggtg 505
              ||||||||||||||||||||
Sbjct: 105349 tatatatacatgtacaggtg 105368



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>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome
          Length = 490885

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    accttatatattgggataaa 546
              ||||||||||||||||||||
Sbjct: 262457 accttatatattgggataaa 262438



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>emb|AL032649.1|CEY55D9A Caenorhabditis elegans YAC Y55D9A, complete sequence
          Length = 16966

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  aaagcattttgttgatttca 189
            ||||||||||||||||||||
Sbjct: 2021 aaagcattttgttgatttca 2040



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>emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 on chromosome Xp22.11-22.2
              Contains the 3' end of the CDKL5 gene for cyclin-dependent
              kinase-like 5, the 3' end of the RS1 gene for retinoschisis
              (X-linked, juvenile) 1, and a gap junction protein, alpha
              2, 38kDa (connexin 38) (GJA2) pseudogene, complete sequence
          Length = 145538

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    aatgaaagggaaagcaggat 341
              ||||||||||||||||||||
Sbjct: 138899 aatgaaagggaaagcaggat 138880



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>emb|AL357123.11| Human DNA sequence from clone RP11-287E6 on chromosome Xq26.3-27.3,
             complete sequence
          Length = 72354

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   gaaagaaaagaagttaatag 163
             ||||||||||||||||||||
Sbjct: 42290 gaaagaaaagaagttaatag 42271



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>emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chromosome 10 Contains CXCL12
              gene for chemokine (C-X-C motif) ligand 12 (stromal
              cell-derived factor 1), two putative transcripts and two
              putative CpG islands, complete sequence
          Length = 184474

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    aacagcagaagaagtagaga 294
              ||||||||||||||||||||
Sbjct: 140306 aacagcagaagaagtagaga 140325



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>emb|X65054.1|CEPGPAG C.elegans cepgpA gene for P-glycoprotein A
          Length = 9815

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 aaagcattttgttgatttca 189
           ||||||||||||||||||||
Sbjct: 110 aaagcattttgttgatttca 91



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>emb|X57841.1|SSSPAGEN S.sobrinus spaA gene for antigen I/II
          Length = 4753

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   agcaagcatatgagcagcaa 106
            ||||||||||||||||||||
Sbjct: 1374 agcaagcatatgagcagcaa 1393



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>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24,
             complete sequence
          Length = 177516

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   aaagaaaagaagttaatagc 164
             ||||||||||||||||||||
Sbjct: 24295 aaagaaaagaagttaatagc 24314



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>emb|BX821764.1|CNS0AA9S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL72ZA02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 445

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 216 agaatgcacagacttgtcgggaacaggtggga 247
           ||||||||||||||||| ||  ||||||||||
Sbjct: 197 agaatgcacagacttgttggcgacaggtggga 228



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>emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete sequence
          Length = 145822

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    aatgaaagggaaagcaggat 341
              ||||||||||||||||||||
Sbjct: 124981 aatgaaagggaaagcaggat 125000


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 118,768,849
Number of extensions: 7212882
Number of successful extensions: 149097
Number of sequences better than 10.0: 49
Number of HSP's gapped: 149094
Number of HSP's successfully gapped: 66
Length of query: 563
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 541
Effective length of database: 18,508,616,841
Effective search space: 10013161710981
Effective search space used: 10013161710981
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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