ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064K13, full insert sequence Length = 1578 Score = 581 bits (293), Expect = e-162 Identities = 545/629 (86%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 183 gcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctc 242 Query: 222 cacgcgctcgcctccagctcctccctcgaccaggaagggatccggaagggggtcgacctg 281 ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 243 cactccctcgcctccagctcctccctcgaccaggaagggatccgcaagggggtcgacctg 302 Query: 282 ctgcggcgctgcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaag 341 |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 303 ctgcggcggtgcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaag 362 Query: 342 gaggacatctccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatg 401 || ||||||||||||||||| ||||| ||| | ||||| ||||||||||||||||||||| Sbjct: 363 gatgacatctccaccgccaacctcaaatacctactcgtaccgtactaccttggggaaatg 422 Query: 402 attgagcaagtggagcaggaagaccggattccagtcctcaaggcatcacaggaccattta 461 | ||| || | ||||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 423 actgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttg 482 Query: 462 aaggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaatta 521 ||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| || || Sbjct: 483 aaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaata 542 Query: 522 tatagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtac 581 | ||| ||| ||| |||| ||| |||||| ||||||||||| |||||||| ||| | Sbjct: 543 tctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttc 602 Query: 582 aagcggcaaaaggctgcagaaatgaagctccaagagatcaaacagagaaaggaaaggcgt 641 ||||| |||||||||||||||| ||||||| ||| ||||| |||| || ||||||||| Sbjct: 603 aagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgt 662 Query: 642 gggcgctcattgagagcaacggctttatcggcacctatcgaagccggggaagaagatgat 701 |||| |||||||||||| | |||||||| || ||||| ||||| ||||| ||||||| Sbjct: 663 aggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgcc 722 Query: 702 ttggagggcgatggagaggaagaaagagaggcttggcttgctactatctcgttgtctctc 761 || |||| ||||||||||||||||||||||| ||| | ||||||||||| ||| |||| Sbjct: 723 tttgaggatgatggagaggaagaaagagaggcatggttagctactatctcattggctcta 782 Query: 762 tgcaaggcttttgatcttgttgacatgtt 790 |||||||||||||| ||| |||||||||| Sbjct: 783 tgcaaggcttttgaccttcttgacatgtt 811 Score = 486 bits (245), Expect = e-133 Identities = 440/505 (87%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 869 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 928 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 929 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgc 988 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 989 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 1048 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1049 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 1108 Query: 1088 ggcagcacaagtttttcagcctagtttcaggatgccgacaatgagcatcgaacaagccgg 1147 ||||||||||||||||||||| |||| ||| |||| || |||||||| ||| |||| || Sbjct: 1109 ggcagcacaagtttttcagccaagttataggttgccaacgatgagcatagaagaagctgg 1168 Query: 1148 cctagctgaaatgaaaatgatggagcaatggcaagaaagtaccgccaagatgattcaaga 1207 | || ||| ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 1169 cttacgtgagatgaaaatgatggagaaatggcaagaaagaactgccaagatgattcaaga 1228 Query: 1208 ggcaagctcctcttggcacaaggatgacactagtttggcgcaggacgacgaggacgcaga 1267 ||| |||| | ||||||||||||| || | | | || || || ||||||||||| || Sbjct: 1229 atcaaactccgcatggcacaaggatggcagtcggtcagcccaagaggacgaggacgccga 1288 Query: 1268 agaggagaaagcaagggcatgggatgactggaaggatgaaaacccacgcggcgcaggcaa 1327 |||||||||||| || | |||||||||||||||||| || ||||| || || |||||||| Sbjct: 1289 agaggagaaagcgagaggatgggatgactggaaggacgataaccctcgtggtgcaggcaa 1348 Query: 1328 caagaagcttactccatgtggctaa 1352 ||||||||| ||||| ||||||||| Sbjct: 1349 caagaagctcactccctgtggctaa 1373
>dbj|AK242643.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090024N03, full insert sequence Length = 1543 Score = 573 bits (289), Expect = e-160 Identities = 544/629 (86%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 157 gcggaggaggaggacgccgacctcccgctccctgccctcttcgacaaggcgtcccacctc 216 Query: 222 cacgcgctcgcctccagctcctccctcgaccaggaagggatccggaagggggtcgacctg 281 ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 217 cactccctcgcctccagctcctccctcgatcaggaagggatccgcaagggggtcgacctg 276 Query: 282 ctgcggcgctgcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaag 341 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 277 ctgcggcggtgcgacgagatggtcagtaagctcggcctcttctcctccaacgagaccaag 336 Query: 342 gaggacatctccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatg 401 || ||| ||||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct: 337 gatgacgtctccactgccaacctcaaatacctactcgtgccgtactaccttggggaaatg 396 Query: 402 attgagcaagtggagcaggaagaccggattccagtcctcaaggcatcacaggaccattta 461 | ||| || | ||||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 397 actgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttg 456 Query: 462 aaggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaatta 521 ||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| |||| Sbjct: 457 aaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaattg 516 Query: 522 tatagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtac 581 | ||| ||| ||| |||| ||| |||||| ||||||||||| |||||||| ||| | Sbjct: 517 tctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttc 576 Query: 582 aagcggcaaaaggctgcagaaatgaagctccaagagatcaaacagagaaaggaaaggcgt 641 ||||| |||||||||||||||| ||||||| ||| ||||| |||| || ||||||||| Sbjct: 577 aagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgt 636 Query: 642 gggcgctcattgagagcaacggctttatcggcacctatcgaagccggggaagaagatgat 701 |||| |||||||||||| | |||||||| || ||||| ||||| ||||| ||||||| | Sbjct: 637 aggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgct 696 Query: 702 ttggagggcgatggagaggaagaaagagaggcttggcttgctactatctcgttgtctctc 761 || |||| ||||||||||||||||||||||| ||| | ||||||||||| ||| |||| Sbjct: 697 tttgaggatgatggagaggaagaaagagaggcatggttagctactatctcattggctcta 756 Query: 762 tgcaaggcttttgatcttgttgacatgtt 790 |||||||||||||| ||| |||||||||| Sbjct: 757 tgcaaggcttttgaccttcttgacatgtt 785 Score = 500 bits (252), Expect = e-138 Identities = 441/504 (87%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 843 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaaaggctgaagcatggcaccataa 902 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 903 tgctgccaaccgtgcaccatattccaagccagctgatccaatcacttgtgcaacatttgc 962 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 963 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 1022 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1023 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 1082 Query: 1088 ggcagcacaagtttttcagcctagtttcaggatgccgacaatgagcatcgaacaagccgg 1147 ||||||||||||||||||||| |||| |||| |||| || |||||||| ||| |||| || Sbjct: 1083 ggcagcacaagtttttcagccaagttacaggttgccaacgatgagcatagaagaagctgg 1142 Query: 1148 cctagctgaaatgaaaatgatggagcaatggcaagaaagtaccgccaagatgattcaaga 1207 | || ||| ||||||||||||||| ||||||||||||| || || |||||||||||||| Sbjct: 1143 cttacgtgagatgaaaatgatggagaaatggcaagaaagaactgctaagatgattcaaga 1202 Query: 1208 ggcaagctcctcttggcacaaggatgacactagtttggcgcaggacgacgaggacgcaga 1267 ||| |||| | ||||||||||||| || | | | || || || || |||||||| || Sbjct: 1203 atcaaactccgcatggcacaaggatggcagtcggtcagcccaagaggatgaggacgctga 1262 Query: 1268 agaggagaaagcaagggcatgggatgactggaaggatgaaaacccacgcggcgcaggcaa 1327 ||||||||||||||| |||||||||||||||||||| || ||||| || || |||||||| Sbjct: 1263 agaggagaaagcaagagcatgggatgactggaaggacgataaccctcgtggtgcaggcaa 1322 Query: 1328 caagaagcttactccatgtggcta 1351 ||||||||| ||||| |||||||| Sbjct: 1323 caagaagctcactccctgtggcta 1346
>ref|NM_001072641.1| Oryza sativa (japonica cultivar-group) Os12g0137500 (Os12g0137500) mRNA, complete cds Length = 1257 Score = 573 bits (289), Expect = e-160 Identities = 544/629 (86%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 67 gcggaggaggaggacgccgacctcccgctccctgccctcttcgacaaggcgtcccacctc 126 Query: 222 cacgcgctcgcctccagctcctccctcgaccaggaagggatccggaagggggtcgacctg 281 ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 127 cactccctcgcctccagctcctccctcgatcaggaagggatccgcaagggggtcgacctg 186 Query: 282 ctgcggcgctgcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaag 341 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 187 ctgcggcggtgcgacgagatggtcagtaagctcggcctcttctcctccaacgagaccaag 246 Query: 342 gaggacatctccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatg 401 || ||| ||||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct: 247 gatgacgtctccactgccaacctcaaatacctactcgtgccgtactaccttggggaaatg 306 Query: 402 attgagcaagtggagcaggaagaccggattccagtcctcaaggcatcacaggaccattta 461 | ||| || | ||||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 307 actgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttg 366 Query: 462 aaggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaatta 521 ||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| |||| Sbjct: 367 aaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaattg 426 Query: 522 tatagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtac 581 | ||| ||| ||| |||| ||| |||||| ||||||||||| |||||||| ||| | Sbjct: 427 tctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttc 486 Query: 582 aagcggcaaaaggctgcagaaatgaagctccaagagatcaaacagagaaaggaaaggcgt 641 ||||| |||||||||||||||| ||||||| ||| ||||| |||| || ||||||||| Sbjct: 487 aagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgt 546 Query: 642 gggcgctcattgagagcaacggctttatcggcacctatcgaagccggggaagaagatgat 701 |||| |||||||||||| | |||||||| || ||||| ||||| ||||| ||||||| | Sbjct: 547 aggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgct 606 Query: 702 ttggagggcgatggagaggaagaaagagaggcttggcttgctactatctcgttgtctctc 761 || |||| ||||||||||||||||||||||| ||| | ||||||||||| ||| |||| Sbjct: 607 tttgaggatgatggagaggaagaaagagaggcatggttagctactatctcattggctcta 666 Query: 762 tgcaaggcttttgatcttgttgacatgtt 790 |||||||||||||| ||| |||||||||| Sbjct: 667 tgcaaggcttttgaccttcttgacatgtt 695 Score = 500 bits (252), Expect = e-138 Identities = 441/504 (87%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 753 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaaaggctgaagcatggcaccataa 812 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 813 tgctgccaaccgtgcaccatattccaagccagctgatccaatcacttgtgcaacatttgc 872 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 873 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 932 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 933 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 992 Query: 1088 ggcagcacaagtttttcagcctagtttcaggatgccgacaatgagcatcgaacaagccgg 1147 ||||||||||||||||||||| |||| |||| |||| || |||||||| ||| |||| || Sbjct: 993 ggcagcacaagtttttcagccaagttacaggttgccaacgatgagcatagaagaagctgg 1052 Query: 1148 cctagctgaaatgaaaatgatggagcaatggcaagaaagtaccgccaagatgattcaaga 1207 | || ||| ||||||||||||||| ||||||||||||| || || |||||||||||||| Sbjct: 1053 cttacgtgagatgaaaatgatggagaaatggcaagaaagaactgctaagatgattcaaga 1112 Query: 1208 ggcaagctcctcttggcacaaggatgacactagtttggcgcaggacgacgaggacgcaga 1267 ||| |||| | ||||||||||||| || | | | || || || || |||||||| || Sbjct: 1113 atcaaactccgcatggcacaaggatggcagtcggtcagcccaagaggatgaggacgctga 1172 Query: 1268 agaggagaaagcaagggcatgggatgactggaaggatgaaaacccacgcggcgcaggcaa 1327 ||||||||||||||| |||||||||||||||||||| || ||||| || || |||||||| Sbjct: 1173 agaggagaaagcaagagcatgggatgactggaaggacgataaccctcgtggtgcaggcaa 1232 Query: 1328 caagaagcttactccatgtggcta 1351 ||||||||| ||||| |||||||| Sbjct: 1233 caagaagctcactccctgtggcta 1256
>gb|AY224436.1| Oryza sativa (japonica cultivar-group) isolate 21639 PP2A regulatory subunit-like protein mRNA, complete cds Length = 1257 Score = 565 bits (285), Expect = e-157 Identities = 543/629 (86%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 67 gcggaggaggaggacgccgacctcccgctccctgccctcttcgacaaggcgtcccacctc 126 Query: 222 cacgcgctcgcctccagctcctccctcgaccaggaagggatccggaagggggtcgacctg 281 ||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 127 cactccctcgcctccagctcctccctcgatcaggaagggatccgcaagggggtcgacctg 186 Query: 282 ctgcggcgctgcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaag 341 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 187 ctgcggcggtgcgacgagatggtcagtaagctcggcctcttctcctccaacgagaccaag 246 Query: 342 gaggacatctccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatg 401 || ||| ||||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct: 247 gatgacgtctccactgccaacctcaaatacctactcgtgccgtactaccttggggaaatg 306 Query: 402 attgagcaagtggagcaggaagaccggattccagtcctcaaggcatcacaggaccattta 461 | ||| || | ||||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 307 actgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttg 366 Query: 462 aaggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaatta 521 ||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| |||| Sbjct: 367 aaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaattg 426 Query: 522 tatagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtac 581 | ||| ||| ||| |||| ||| |||||| ||||||||||| |||| ||| ||| | Sbjct: 427 tctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggctgcacggttc 486 Query: 582 aagcggcaaaaggctgcagaaatgaagctccaagagatcaaacagagaaaggaaaggcgt 641 ||||| |||||||||||||||| ||||||| ||| ||||| |||| || ||||||||| Sbjct: 487 aagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgt 546 Query: 642 gggcgctcattgagagcaacggctttatcggcacctatcgaagccggggaagaagatgat 701 |||| |||||||||||| | |||||||| || ||||| ||||| ||||| ||||||| | Sbjct: 547 aggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgct 606 Query: 702 ttggagggcgatggagaggaagaaagagaggcttggcttgctactatctcgttgtctctc 761 || |||| ||||||||||||||||||||||| ||| | ||||||||||| ||| |||| Sbjct: 607 tttgaggatgatggagaggaagaaagagaggcatggttagctactatctcattggctcta 666 Query: 762 tgcaaggcttttgatcttgttgacatgtt 790 |||||||||||||| ||| |||||||||| Sbjct: 667 tgcaaggcttttgaccttcttgacatgtt 695 Score = 500 bits (252), Expect = e-138 Identities = 441/504 (87%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 753 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaaaggctgaagcatggcaccataa 812 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 813 tgctgccaaccgtgcaccatattccaagccagctgatccaatcacttgtgcaacatttgc 872 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 873 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 932 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 933 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 992 Query: 1088 ggcagcacaagtttttcagcctagtttcaggatgccgacaatgagcatcgaacaagccgg 1147 ||||||||||||||||||||| |||| |||| |||| || |||||||| ||| |||| || Sbjct: 993 ggcagcacaagtttttcagccaagttacaggttgccaacgatgagcatagaagaagctgg 1052 Query: 1148 cctagctgaaatgaaaatgatggagcaatggcaagaaagtaccgccaagatgattcaaga 1207 | || ||| ||||||||||||||| ||||||||||||| || || |||||||||||||| Sbjct: 1053 cttacgtgagatgaaaatgatggagaaatggcaagaaagaactgctaagatgattcaaga 1112 Query: 1208 ggcaagctcctcttggcacaaggatgacactagtttggcgcaggacgacgaggacgcaga 1267 ||| |||| | ||||||||||||| || | | | || || || || |||||||| || Sbjct: 1113 atcaaactccgcatggcacaaggatggcagtcggtcagcccaagaggatgaggacgctga 1172 Query: 1268 agaggagaaagcaagggcatgggatgactggaaggatgaaaacccacgcggcgcaggcaa 1327 ||||||||||||||| |||||||||||||||||||| || ||||| || || |||||||| Sbjct: 1173 agaggagaaagcaagagcatgggatgactggaaggacgataaccctcgtggtgcaggcaa 1232 Query: 1328 caagaagcttactccatgtggcta 1351 ||||||||| ||||| |||||||| Sbjct: 1233 caagaagctcactccctgtggcta 1256
>ref|NM_001072246.1| Oryza sativa (japonica cultivar-group) Os11g0141000 (Os11g0141000) mRNA, partial cds Length = 1383 Score = 498 bits (251), Expect = e-137 Identities = 482/559 (86%) Strand = Plus / Plus Query: 232 cctccagctcctccctcgaccaggaagggatccggaagggggtcgacctgctgcggcgct 291 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 205 cctccagctcctccctcgaccaggaagggatccgcaagggggtcgacctgctgcggcggt 264 Query: 292 gcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaaggaggacatct 351 |||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 265 gcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaaggatgacatct 324 Query: 352 ccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatgattgagcaag 411 |||||||||| ||||| ||| | ||||| |||||||||||||||||||||| ||| | Sbjct: 325 ccaccgccaacctcaaatacctactcgtaccgtactaccttggggaaatgactgaaaggg 384 Query: 412 tggagcaggaagaccggattccagtcctcaaggcatcacaggaccatttaaaggagttca 471 | | ||||||||| ||||| |||||||| ||||| || ||||| ||||| ||||| |||| Sbjct: 385 tagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttgaaggaattca 444 Query: 472 tttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattatatagacagg 531 ||||| | ||||||||| |||||||||| |||||| ||||||| || ||| ||| ||| Sbjct: 445 tttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatatctaggcaga 504 Query: 532 ggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtacaagcggcaaa 591 ||| |||| ||| |||||| ||||||||||| |||||||| ||| |||||| |||| Sbjct: 505 agcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttcaagcgccaaa 564 Query: 592 aggctgcagaaatgaagctccaagagatcaaacagagaaaggaaaggcgtgggcgctcat 651 |||||||||||| ||||||| ||| ||||| |||| || ||||||||| |||| |||| Sbjct: 565 aggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgtaggcggtcat 624 Query: 652 tgagagcaacggctttatcggcacctatcgaagccggggaagaagatgatttggagggcg 711 |||||||| | |||||||| || ||||| ||||| ||||| ||||||| ||| |||| | Sbjct: 625 tgagagcagctgctttatcagctcctattgaagctggggaggaagatgcttttgaggatg 684 Query: 712 atggagaggaagaaagagaggcttggcttgctactatctcgttgtctctctgcaaggctt 771 |||||||||||||||||||||| ||| | ||||||||||| ||| |||| |||||||||| Sbjct: 685 atggagaggaagaaagagaggcatggttagctactatctcattggctctatgcaaggctt 744 Query: 772 ttgatcttgttgacatgtt 790 |||| ||| |||||||||| Sbjct: 745 ttgaccttcttgacatgtt 763 Score = 335 bits (169), Expect = 3e-88 Identities = 265/297 (89%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 821 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 880 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 881 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgc 940 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 941 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 1000 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1001 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 1060 Query: 1088 ggcagcacaagtttttcagcctagtttcaggatgccgacaatgagcatcgaacaagc 1144 ||||||||||||||||||||| |||| ||| |||| || |||||||| ||| |||| Sbjct: 1061 ggcagcacaagtttttcagccaagttataggttgccaacgatgagcatagaagaagc 1117 Score = 65.9 bits (33), Expect = 4e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 1292 tgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggcta 1351 |||||||||||| || ||||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 1118 tgactggaaggacgataaccctcgtggtgcaggcaacaagaagctcactccctgtggcta 1177 Query: 1352 a 1352 | Sbjct: 1178 a 1178
>dbj|AK058901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A08, full insert sequence Length = 1383 Score = 498 bits (251), Expect = e-137 Identities = 482/559 (86%) Strand = Plus / Plus Query: 232 cctccagctcctccctcgaccaggaagggatccggaagggggtcgacctgctgcggcgct 291 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 205 cctccagctcctccctcgaccaggaagggatccgcaagggggtcgacctgctgcggcggt 264 Query: 292 gcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaaggaggacatct 351 |||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 265 gcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaaggatgacatct 324 Query: 352 ccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatgattgagcaag 411 |||||||||| ||||| ||| | ||||| |||||||||||||||||||||| ||| | Sbjct: 325 ccaccgccaacctcaaatacctactcgtaccgtactaccttggggaaatgactgaaaggg 384 Query: 412 tggagcaggaagaccggattccagtcctcaaggcatcacaggaccatttaaaggagttca 471 | | ||||||||| ||||| |||||||| ||||| || ||||| ||||| ||||| |||| Sbjct: 385 tagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttgaaggaattca 444 Query: 472 tttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattatatagacagg 531 ||||| | ||||||||| |||||||||| |||||| ||||||| || ||| ||| ||| Sbjct: 445 tttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatatctaggcaga 504 Query: 532 ggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtacaagcggcaaa 591 ||| |||| ||| |||||| ||||||||||| |||||||| ||| |||||| |||| Sbjct: 505 agcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttcaagcgccaaa 564 Query: 592 aggctgcagaaatgaagctccaagagatcaaacagagaaaggaaaggcgtgggcgctcat 651 |||||||||||| ||||||| ||| ||||| |||| || ||||||||| |||| |||| Sbjct: 565 aggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgtaggcggtcat 624 Query: 652 tgagagcaacggctttatcggcacctatcgaagccggggaagaagatgatttggagggcg 711 |||||||| | |||||||| || ||||| ||||| ||||| ||||||| ||| |||| | Sbjct: 625 tgagagcagctgctttatcagctcctattgaagctggggaggaagatgcttttgaggatg 684 Query: 712 atggagaggaagaaagagaggcttggcttgctactatctcgttgtctctctgcaaggctt 771 |||||||||||||||||||||| ||| | ||||||||||| ||| |||| |||||||||| Sbjct: 685 atggagaggaagaaagagaggcatggttagctactatctcattggctctatgcaaggctt 744 Query: 772 ttgatcttgttgacatgtt 790 |||| ||| |||||||||| Sbjct: 745 ttgaccttcttgacatgtt 763 Score = 335 bits (169), Expect = 3e-88 Identities = 265/297 (89%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 821 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 880 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 881 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgc 940 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 941 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 1000 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1001 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 1060 Query: 1088 ggcagcacaagtttttcagcctagtttcaggatgccgacaatgagcatcgaacaagc 1144 ||||||||||||||||||||| |||| ||| |||| || |||||||| ||| |||| Sbjct: 1061 ggcagcacaagtttttcagccaagttataggttgccaacgatgagcatagaagaagc 1117 Score = 65.9 bits (33), Expect = 4e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 1292 tgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggcta 1351 |||||||||||| || ||||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 1118 tgactggaaggacgataaccctcgtggtgcaggcaacaagaagctcactccctgtggcta 1177 Query: 1352 a 1352 | Sbjct: 1178 a 1178
>emb|Z54153.1|OSCHINDPR O.sativa mRNA for chilling-inducible protein Length = 1585 Score = 432 bits (218), Expect = e-117 Identities = 387/442 (87%), Gaps = 1/442 (0%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 265 gcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctc 324 Query: 222 cacgcgctcgcctccagctcctccctcgaccaggaagggatccggaagggggtcgacctg 281 ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 325 cactccctcgcctccagctcctccctcgaccaggaagggatccgcaagggggtcgacctg 384 Query: 282 ctgcggcgctgcgacgagatggtcagcaagctcggcctcttctcctccaacgagaccaag 341 |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 385 ctgcggcggtgcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaag 444 Query: 342 gaggacatctccaccgccaatctcaagtacttgctcgtgccgtactaccttggggaaatg 401 || ||||||||||||||||| ||||| ||| | ||||| ||||||||||||||||||||| Sbjct: 445 gatgacatctccaccgccaacctcaaatacctactcgtaccgtactaccttggggaaatg 504 Query: 402 attgagcaagtggagcaggaagaccggattccagtcctcaaggcatcacaggaccattta 461 | ||| || | ||||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 505 actgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttg 564 Query: 462 aaggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaatta 521 ||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| || || Sbjct: 565 aaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaata 624 Query: 522 tatagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggttgccaggtac 581 | ||| ||| | | |||| ||| |||||| ||||||||||| |||||||| ||| | Sbjct: 625 tctaggcagaag-aacctgataccatggcaaatcgaagagcacagaaggttgcacggttc 683 Query: 582 aagcggcaaaaggctgcagaaa 603 ||||| |||||||||||||||| Sbjct: 684 aagcgccaaaaggctgcagaaa 705 Score = 216 bits (109), Expect = 2e-52 Identities = 241/285 (84%) Strand = Plus / Plus Query: 1068 accagtgagagggaaagaatggcagcacaagtttttcagcctagtttcaggatgccgaca 1127 |||||||| || || |||||||||||||||||||||||||| |||| ||| |||| || Sbjct: 1054 accagtgaaagagagagaatggcagcacaagtttttcagccaagttataggttgccaacg 1113 Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 1114 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 1173 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || ||||||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 1174 actgccaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 1233 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || ||||||||||| |||||||||||||| || | |||||||||||||||||| || Sbjct: 1234 caagaggacgaggacgccgaagaggagaaagcgagaggatgggatgactggaaggacgat 1293 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggctaa 1352 ||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 1294 aaccctcgtggtgcaggcaacaagaagctcactccctgtggctaa 1338 Score = 141 bits (71), Expect = 9e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 938 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 997 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaact 962 |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 998 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaact 1052
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 339 bits (171), Expect = 2e-89 Identities = 246/271 (90%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 1819293 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaaaggctgaagcatggcaccataa 1819352 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 1819353 tgctgccaaccgtgcaccatattccaagccagctgatccaatcacttgtgcaacatttgc 1819412 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 1819413 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 1819472 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1819473 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 1819532 Query: 1088 ggcagcacaagtttttcagcctagtttcagg 1118 ||||||||||||||||||||| |||| |||| Sbjct: 1819533 ggcagcacaagtttttcagccaagttacagg 1819563 Score = 174 bits (88), Expect = 6e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 252 caggaagggatccggaagggggtcgacctgctgcggcgctgcgacgagatggtcagcaag 311 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1816989 caggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaag 1817048 Query: 312 ctcggcctcttctcctccaacgagaccaaggaggacatctccaccgccaatctcaa 367 |||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 1817049 ctcggcctcttctcctccaacgagaccaaggatgacgtctccactgccaacctcaa 1817104 Score = 167 bits (84), Expect = 1e-37 Identities = 189/224 (84%) Strand = Plus / Plus Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 1820285 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 1820344 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || || |||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 1820345 actgctaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 1820404 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || || |||||||| ||||||||||||||||| |||||||||||||||||||| || Sbjct: 1820405 caagaggatgaggacgctgaagaggagaaagcaagagcatgggatgactggaaggacgat 1820464 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggcta 1351 ||||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 1820465 aaccctcgtggtgcaggcaacaagaagctcactccctgtggcta 1820508 Score = 129 bits (65), Expect = 3e-26 Identities = 140/165 (84%) Strand = Plus / Plus Query: 568 aggttgccaggtacaagcggcaaaaggctgcagaaatgaagctccaagagatcaaacaga 627 ||||||| ||| |||||| |||||||||||||||| ||||||| ||| ||||| ||| Sbjct: 1817742 aggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggaga 1817801 Query: 628 gaaaggaaaggcgtgggcgctcattgagagcaacggctttatcggcacctatcgaagccg 687 | || ||||||||| |||| |||||||||||| | |||||||| || ||||| ||||| | Sbjct: 1817802 ggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctg 1817861 Query: 688 gggaagaagatgatttggagggcgatggagaggaagaaagagagg 732 |||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 1817862 gggaggaagatgcttttgaggatgatggagaggaagaaagagagg 1817906 Score = 123 bits (62), Expect = 2e-24 Identities = 86/94 (91%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1816791 gcggaggaggaggacgccgacctcccgctccctgccctcttcgacaaggcgtcccacctc 1816850 Query: 222 cacgcgctcgcctccagctcctccctcgaccagg 255 ||| | ||||||||||||||||||||||| |||| Sbjct: 1816851 cactccctcgcctccagctcctccctcgatcagg 1816884 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 378 gtgccgtactaccttggggaaatgattgagcaagtggagcaggaagaccggattccagtc 437 ||||||||||||||||||||||||| ||| || | ||||||||| ||||| |||||| Sbjct: 1817227 gtgccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtc 1817286 Query: 438 ctcaaggcatcacaggaccatttaaagg 465 || ||||| || ||||| ||||| |||| Sbjct: 1817287 cttaaggcgtcgcaggatcatttgaagg 1817314 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 463 aggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattat 522 |||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| |||| | Sbjct: 1817440 aggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaattgt 1817499 Query: 523 atagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggt 571 ||| ||| ||| |||| ||| |||||| ||||||||||| ||||| Sbjct: 1817500 ctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggt 1817548 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 218 cctccacgcgctcgcctccagctcc 242 ||||| ||||||||||||||||||| Sbjct: 4302704 cctcctcgcgctcgcctccagctcc 4302728
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 339 bits (171), Expect = 2e-89 Identities = 246/271 (90%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 14011 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaaaggctgaagcatggcaccataa 14070 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 14071 tgctgccaaccgtgcaccatattccaagccagctgatccaatcacttgtgcaacatttgc 14130 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 14131 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 14190 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 14191 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 14250 Query: 1088 ggcagcacaagtttttcagcctagtttcagg 1118 ||||||||||||||||||||| |||| |||| Sbjct: 14251 ggcagcacaagtttttcagccaagttacagg 14281 Score = 174 bits (88), Expect = 6e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 252 caggaagggatccggaagggggtcgacctgctgcggcgctgcgacgagatggtcagcaag 311 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 11707 caggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaag 11766 Query: 312 ctcggcctcttctcctccaacgagaccaaggaggacatctccaccgccaatctcaa 367 |||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 11767 ctcggcctcttctcctccaacgagaccaaggatgacgtctccactgccaacctcaa 11822 Score = 167 bits (84), Expect = 1e-37 Identities = 189/224 (84%) Strand = Plus / Plus Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 15003 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 15062 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || || |||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 15063 actgctaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 15122 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || || |||||||| ||||||||||||||||| |||||||||||||||||||| || Sbjct: 15123 caagaggatgaggacgctgaagaggagaaagcaagagcatgggatgactggaaggacgat 15182 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggcta 1351 ||||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 15183 aaccctcgtggtgcaggcaacaagaagctcactccctgtggcta 15226 Score = 129 bits (65), Expect = 3e-26 Identities = 140/165 (84%) Strand = Plus / Plus Query: 568 aggttgccaggtacaagcggcaaaaggctgcagaaatgaagctccaagagatcaaacaga 627 ||||||| ||| |||||| |||||||||||||||| ||||||| ||| ||||| ||| Sbjct: 12460 aggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggaga 12519 Query: 628 gaaaggaaaggcgtgggcgctcattgagagcaacggctttatcggcacctatcgaagccg 687 | || ||||||||| |||| |||||||||||| | |||||||| || ||||| ||||| | Sbjct: 12520 ggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctg 12579 Query: 688 gggaagaagatgatttggagggcgatggagaggaagaaagagagg 732 |||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 12580 gggaggaagatgcttttgaggatgatggagaggaagaaagagagg 12624 Score = 123 bits (62), Expect = 2e-24 Identities = 86/94 (91%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 11509 gcggaggaggaggacgccgacctcccgctccctgccctcttcgacaaggcgtcccacctc 11568 Query: 222 cacgcgctcgcctccagctcctccctcgaccagg 255 ||| | ||||||||||||||||||||||| |||| Sbjct: 11569 cactccctcgcctccagctcctccctcgatcagg 11602 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 378 gtgccgtactaccttggggaaatgattgagcaagtggagcaggaagaccggattccagtc 437 ||||||||||||||||||||||||| ||| || | ||||||||| ||||| |||||| Sbjct: 11945 gtgccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtc 12004 Query: 438 ctcaaggcatcacaggaccatttaaagg 465 || ||||| || ||||| ||||| |||| Sbjct: 12005 cttaaggcgtcgcaggatcatttgaagg 12032 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 463 aggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattat 522 |||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| |||| | Sbjct: 12158 aggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaattgt 12217 Query: 523 atagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggt 571 ||| ||| ||| |||| ||| |||||| ||||||||||| ||||| Sbjct: 12218 ctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggt 12266
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 339 bits (171), Expect = 2e-89 Identities = 246/271 (90%) Strand = Plus / Minus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 21189 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaaaggctgaagcatggcaccataa 21130 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 21129 tgctgccaaccgtgcaccatattccaagccagctgatccaatcacttgtgcaacatttgc 21070 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 21069 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 21010 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 21009 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 20950 Query: 1088 ggcagcacaagtttttcagcctagtttcagg 1118 ||||||||||||||||||||| |||| |||| Sbjct: 20949 ggcagcacaagtttttcagccaagttacagg 20919 Score = 174 bits (88), Expect = 6e-40 Identities = 109/116 (93%) Strand = Plus / Minus Query: 252 caggaagggatccggaagggggtcgacctgctgcggcgctgcgacgagatggtcagcaag 311 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 23493 caggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaag 23434 Query: 312 ctcggcctcttctcctccaacgagaccaaggaggacatctccaccgccaatctcaa 367 |||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 23433 ctcggcctcttctcctccaacgagaccaaggatgacgtctccactgccaacctcaa 23378 Score = 167 bits (84), Expect = 1e-37 Identities = 189/224 (84%) Strand = Plus / Minus Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 20197 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 20138 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || || |||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 20137 actgctaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 20078 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || || |||||||| ||||||||||||||||| |||||||||||||||||||| || Sbjct: 20077 caagaggatgaggacgctgaagaggagaaagcaagagcatgggatgactggaaggacgat 20018 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggcta 1351 ||||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 20017 aaccctcgtggtgcaggcaacaagaagctcactccctgtggcta 19974 Score = 129 bits (65), Expect = 3e-26 Identities = 140/165 (84%) Strand = Plus / Minus Query: 568 aggttgccaggtacaagcggcaaaaggctgcagaaatgaagctccaagagatcaaacaga 627 ||||||| ||| |||||| |||||||||||||||| ||||||| ||| ||||| ||| Sbjct: 22740 aggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggaga 22681 Query: 628 gaaaggaaaggcgtgggcgctcattgagagcaacggctttatcggcacctatcgaagccg 687 | || ||||||||| |||| |||||||||||| | |||||||| || ||||| ||||| | Sbjct: 22680 ggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctg 22621 Query: 688 gggaagaagatgatttggagggcgatggagaggaagaaagagagg 732 |||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 22620 gggaggaagatgcttttgaggatgatggagaggaagaaagagagg 22576 Score = 123 bits (62), Expect = 2e-24 Identities = 86/94 (91%) Strand = Plus / Minus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 23691 gcggaggaggaggacgccgacctcccgctccctgccctcttcgacaaggcgtcccacctc 23632 Query: 222 cacgcgctcgcctccagctcctccctcgaccagg 255 ||| | ||||||||||||||||||||||| |||| Sbjct: 23631 cactccctcgcctccagctcctccctcgatcagg 23598 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Minus Query: 378 gtgccgtactaccttggggaaatgattgagcaagtggagcaggaagaccggattccagtc 437 ||||||||||||||||||||||||| ||| || | ||||||||| ||||| |||||| Sbjct: 23255 gtgccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtc 23196 Query: 438 ctcaaggcatcacaggaccatttaaagg 465 || ||||| || ||||| ||||| |||| Sbjct: 23195 cttaaggcgtcgcaggatcatttgaagg 23168 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Minus Query: 463 aggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattat 522 |||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| |||| | Sbjct: 23042 aggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaattgt 22983 Query: 523 atagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggt 571 ||| ||| ||| |||| ||| |||||| ||||||||||| ||||| Sbjct: 22982 ctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggt 22934
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 329 bits (166), Expect = 2e-86 Identities = 241/266 (90%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 21934 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 21993 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 21994 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgc 22053 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 22054 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 22113 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 22114 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 22173 Query: 1088 ggcagcacaagtttttcagcctagtt 1113 ||||||||||||||||||||| |||| Sbjct: 22174 ggcagcacaagtttttcagccaagtt 22199 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 252 caggaagggatccggaagggggtcgacctgctgcggcgctgcgacgagatggtcagcaag 311 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 19595 caggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaag 19654 Query: 312 ctcggcctcttctcctccaacgagaccaaggaggacatctccaccgccaatctcaa 367 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 19655 gtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaa 19710 Score = 168 bits (85), Expect = 4e-38 Identities = 190/225 (84%) Strand = Plus / Plus Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 22937 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 22996 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || ||||||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 22997 actgccaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 23056 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || ||||||||||| |||||||||||||| || | |||||||||||||||||| || Sbjct: 23057 caagaggacgaggacgccgaagaggagaaagcgagaggatgggatgactggaaggacgat 23116 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggctaa 1352 ||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 23117 aaccctcgtggtgcaggcaacaagaagctcactccctgtggctaa 23161 Score = 139 bits (70), Expect = 3e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 19402 gcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctc 19461 Query: 222 cacgcgctcgcctccagctcctccctcgaccagg 255 ||| | |||||||||||||||||||||||||||| Sbjct: 19462 cactccctcgcctccagctcctccctcgaccagg 19495 Score = 129 bits (65), Expect = 3e-26 Identities = 140/165 (84%) Strand = Plus / Plus Query: 568 aggttgccaggtacaagcggcaaaaggctgcagaaatgaagctccaagagatcaaacaga 627 ||||||| ||| |||||| |||||||||||||||| ||||||| ||| ||||| ||| Sbjct: 20347 aggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggaga 20406 Query: 628 gaaaggaaaggcgtgggcgctcattgagagcaacggctttatcggcacctatcgaagccg 687 | || ||||||||| |||| |||||||||||| | |||||||| || ||||| ||||| | Sbjct: 20407 ggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctg 20466 Query: 688 gggaagaagatgatttggagggcgatggagaggaagaaagagagg 732 |||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 20467 gggaggaagatgcttttgaggatgatggagaggaagaaagagagg 20511 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Plus Query: 381 ccgtactaccttggggaaatgattgagcaagtggagcaggaagaccggattccagtcctc 440 |||||||||||||||||||||| ||| || | ||||||||| ||||| |||||||| Sbjct: 19836 ccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtcctt 19895 Query: 441 aaggcatcacaggaccatttaaagg 465 ||||| || ||||| ||||| |||| Sbjct: 19896 aaggcgtcgcaggatcatttgaagg 19920 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 463 aggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattat 522 |||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| || ||| Sbjct: 20055 aggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatat 20114 Query: 523 atagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggt 571 ||| ||| ||| |||| ||| |||||| ||||||||||| ||||| Sbjct: 20115 ctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggt 20163
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 329 bits (166), Expect = 2e-86 Identities = 241/266 (90%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 108108 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 108167 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 108168 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgc 108227 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 108228 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 108287 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 108288 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 108347 Query: 1088 ggcagcacaagtttttcagcctagtt 1113 ||||||||||||||||||||| |||| Sbjct: 108348 ggcagcacaagtttttcagccaagtt 108373 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 252 caggaagggatccggaagggggtcgacctgctgcggcgctgcgacgagatggtcagcaag 311 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105769 caggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaag 105828 Query: 312 ctcggcctcttctcctccaacgagaccaaggaggacatctccaccgccaatctcaa 367 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 105829 gtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaa 105884 Score = 168 bits (85), Expect = 4e-38 Identities = 190/225 (84%) Strand = Plus / Plus Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 109111 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 109170 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || ||||||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 109171 actgccaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 109230 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || ||||||||||| |||||||||||||| || | |||||||||||||||||| || Sbjct: 109231 caagaggacgaggacgccgaagaggagaaagcgagaggatgggatgactggaaggacgat 109290 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggctaa 1352 ||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 109291 aaccctcgtggtgcaggcaacaagaagctcactccctgtggctaa 109335 Score = 139 bits (70), Expect = 3e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 105576 gcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctc 105635 Query: 222 cacgcgctcgcctccagctcctccctcgaccagg 255 ||| | |||||||||||||||||||||||||||| Sbjct: 105636 cactccctcgcctccagctcctccctcgaccagg 105669 Score = 129 bits (65), Expect = 3e-26 Identities = 140/165 (84%) Strand = Plus / Plus Query: 568 aggttgccaggtacaagcggcaaaaggctgcagaaatgaagctccaagagatcaaacaga 627 ||||||| ||| |||||| |||||||||||||||| ||||||| ||| ||||| ||| Sbjct: 106521 aggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggaga 106580 Query: 628 gaaaggaaaggcgtgggcgctcattgagagcaacggctttatcggcacctatcgaagccg 687 | || ||||||||| |||| |||||||||||| | |||||||| || ||||| ||||| | Sbjct: 106581 ggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctg 106640 Query: 688 gggaagaagatgatttggagggcgatggagaggaagaaagagagg 732 |||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 106641 gggaggaagatgcttttgaggatgatggagaggaagaaagagagg 106685 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Plus Query: 381 ccgtactaccttggggaaatgattgagcaagtggagcaggaagaccggattccagtcctc 440 |||||||||||||||||||||| ||| || | ||||||||| ||||| |||||||| Sbjct: 106010 ccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtcctt 106069 Query: 441 aaggcatcacaggaccatttaaagg 465 ||||| || ||||| ||||| |||| Sbjct: 106070 aaggcgtcgcaggatcatttgaagg 106094 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 463 aggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattat 522 |||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| || ||| Sbjct: 106229 aggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatat 106288 Query: 523 atagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggt 571 ||| ||| ||| |||| ||| |||||| ||||||||||| ||||| Sbjct: 106289 ctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggt 106337
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 329 bits (166), Expect = 2e-86 Identities = 241/266 (90%) Strand = Plus / Plus Query: 848 tgcatttgctcgagaaatgctagatgagcgtaggcaaaaggctgaagaatggcaccataa 907 |||||||||||| |||||||| ||||| |||| ||| |||||||| |||||||||||| Sbjct: 1890278 tgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataa 1890337 Query: 908 tgctgccagccgtgcaccatattccaaaccagctgctccaatcacttgtgcaacttttgc 967 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 1890338 tgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgc 1890397 Query: 968 tcaagacgtcattgaaggcagagcaagtgtttcacaagctcatgaccacaaacaccaacc 1027 |||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || Sbjct: 1890398 tcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagcc 1890457 Query: 1028 cctgatatttggacctgcaagtcttgttggtgggggactcaccagtgagagggaaagaat 1087 ||||||||||| |||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 1890458 gctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaat 1890517 Query: 1088 ggcagcacaagtttttcagcctagtt 1113 ||||||||||||||||||||| |||| Sbjct: 1890518 ggcagcacaagtttttcagccaagtt 1890543 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 252 caggaagggatccggaagggggtcgacctgctgcggcgctgcgacgagatggtcagcaag 311 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1887939 caggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaag 1887998 Query: 312 ctcggcctcttctcctccaacgagaccaaggaggacatctccaccgccaatctcaa 367 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 1887999 gtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaa 1888054 Score = 168 bits (85), Expect = 4e-38 Identities = 190/225 (84%) Strand = Plus / Plus Query: 1128 atgagcatcgaacaagccggcctagctgaaatgaaaatgatggagcaatggcaagaaagt 1187 |||||||| ||| |||| ||| || ||| ||||||||||||||| ||||||||||||| Sbjct: 1891281 atgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaaga 1891340 Query: 1188 accgccaagatgattcaagaggcaagctcctcttggcacaaggatgacactagtttggcg 1247 || ||||||||||||||||| ||| |||| | ||||||||||||| || | | | || Sbjct: 1891341 actgccaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcc 1891400 Query: 1248 caggacgacgaggacgcagaagaggagaaagcaagggcatgggatgactggaaggatgaa 1307 || || ||||||||||| |||||||||||||| || | |||||||||||||||||| || Sbjct: 1891401 caagaggacgaggacgccgaagaggagaaagcgagaggatgggatgactggaaggacgat 1891460 Query: 1308 aacccacgcggcgcaggcaacaagaagcttactccatgtggctaa 1352 ||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 1891461 aaccctcgtggtgcaggcaacaagaagctcactccctgtggctaa 1891505 Score = 139 bits (70), Expect = 3e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 162 gcggcggaggacgacgccgatctcccgctccccgccctcttcgacagggcgtcccacctc 221 |||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1887746 gcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctc 1887805 Query: 222 cacgcgctcgcctccagctcctccctcgaccagg 255 ||| | |||||||||||||||||||||||||||| Sbjct: 1887806 cactccctcgcctccagctcctccctcgaccagg 1887839 Score = 129 bits (65), Expect = 3e-26 Identities = 140/165 (84%) Strand = Plus / Plus Query: 568 aggttgccaggtacaagcggcaaaaggctgcagaaatgaagctccaagagatcaaacaga 627 ||||||| ||| |||||| |||||||||||||||| ||||||| ||| ||||| ||| Sbjct: 1888691 aggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggaga 1888750 Query: 628 gaaaggaaaggcgtgggcgctcattgagagcaacggctttatcggcacctatcgaagccg 687 | || ||||||||| |||| |||||||||||| | |||||||| || ||||| ||||| | Sbjct: 1888751 ggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctg 1888810 Query: 688 gggaagaagatgatttggagggcgatggagaggaagaaagagagg 732 |||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 1888811 gggaggaagatgcttttgaggatgatggagaggaagaaagagagg 1888855 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Plus Query: 381 ccgtactaccttggggaaatgattgagcaagtggagcaggaagaccggattccagtcctc 440 |||||||||||||||||||||| ||| || | ||||||||| ||||| |||||||| Sbjct: 1888180 ccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtcctt 1888239 Query: 441 aaggcatcacaggaccatttaaagg 465 ||||| || ||||| ||||| |||| Sbjct: 1888240 aaggcgtcgcaggatcatttgaagg 1888264 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 463 aggagttcatttctgtgtgtgaagcattggagcttattccagaggctgagcttcaattat 522 |||| ||||||||| | ||||||||| |||||||||| |||||| ||||||| || ||| Sbjct: 1888399 aggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatat 1888458 Query: 523 atagacaggggcagtctgaaaccggggcaaaccgaagagcacaaaaggt 571 ||| ||| ||| |||| ||| |||||| ||||||||||| ||||| Sbjct: 1888459 ctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggt 1888507
>gb|AY775048.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 271 (ACRE271) mRNA, partial cds Length = 783 Score = 61.9 bits (31), Expect = 6e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 948 atcacttgtgcaacttttgctcaagacgtcattgaaggcagagcaagtgtttcacaagct 1007 ||||| ||||| |||||||| ||||| ||||| ||||| || || | |||||||| || Sbjct: 419 atcacctgtgccacttttgcacaagatgtcatagaagggagggccaaggtttcacaggca 478 Query: 1008 catgaccacaaacaccaacccctgatatttggacctgcaagtcttgttggt 1058 ||||| || |||| ||||| | || |||||||||||||||||||||||| Sbjct: 479 catgaacatgaacatcaacctttaatttttggacctgcaagtcttgttggt 529
>emb|CR956619.7| M.truncatula DNA sequence from clone MTH2-65F22 on chromosome 3, complete sequence Length = 148409 Score = 50.1 bits (25), Expect = 0.024 Identities = 37/41 (90%) Strand = Plus / Minus Query: 999 tcacaagctcatgaccacaaacaccaacccctgatatttgg 1039 |||||||| || || |||||||||||||| ||||||||||| Sbjct: 80502 tcacaagcacacgaacacaaacaccaaccactgatatttgg 80462
>emb|BX649270.3| Sminthopsis DNA sequence from clone RZPD668-231M3, complete sequence Length = 51166 Score = 48.1 bits (24), Expect = 0.095 Identities = 27/28 (96%) Strand = Plus / Plus Query: 705 gagggcgatggagaggaagaaagagagg 732 ||||| |||||||||||||||||||||| Sbjct: 44009 gagggagatggagaggaagaaagagagg 44036
>emb|CT963079.4| M.truncatula DNA sequence from clone MTH2-64N20 on chromosome 3, complete sequence Length = 92896 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1410 atataacatttctgttatttcccctca 1436 |||||||||||||||| |||||||||| Sbjct: 65923 atataacatttctgttttttcccctca 65897
>gb|AC090402.8| Homo sapiens chromosome 18, clone RP11-739D7, complete sequence Length = 150690 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 54 tctcccccactccctctgccctc 76 ||||||||||||||||||||||| Sbjct: 23031 tctcccccactccctctgccctc 23009
>ref|XM_687275.1| PREDICTED: Danio rerio similar to ubiquitin specific protease 54 (LOC563912), mRNA Length = 4503 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 331 acgagaccaaggaggacatctccaccgccaa 361 ||||||||||||||||||||| ||| ||||| Sbjct: 413 acgagaccaaggaggacatctgcacagccaa 443
>gb|AC015988.10| Homo sapiens, clone RP11-153F20, complete sequence Length = 150113 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 54 tctcccccactccctctgccctc 76 ||||||||||||||||||||||| Sbjct: 61659 tctcccccactccctctgccctc 61637
>gb|AF257035.1|AF257035 Salmo salar clone BHMS7-046 microsatellite sequence Length = 546 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 705 gagggcgatggagaggaagaaagagag 731 ||||| ||||||||||||||||||||| Sbjct: 168 gagggggatggagaggaagaaagagag 142
>gb|AC107896.7| Homo sapiens chromosome 18, clone RP11-718I15, complete sequence Length = 185750 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 54 tctcccccactccctctgccctc 76 ||||||||||||||||||||||| Sbjct: 162751 tctcccccactccctctgccctc 162773
>emb|BX649277.5| Zebrafish DNA sequence from clone DKEYP-67A10 in linkage group 20, complete sequence Length = 125366 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 acgagaccaaggaggacatctccaccgccaa 361 ||||||||||||||||||||| ||| ||||| Sbjct: 102668 acgagaccaaggaggacatctgcacagccaa 102638
>gb|CP000478.1| Syntrophobacter fumaroxidans MPOB, complete genome Length = 4990251 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 gacctgctgcggcgctgcgacg 297 |||||||||||||||||||||| Sbjct: 1123247 gacctgctgcggcgctgcgacg 1123268
>gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, complete sequence Length = 227506 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1155 gaaatgaaaatgatggagcaat 1176 |||||||||||||||||||||| Sbjct: 17974 gaaatgaaaatgatggagcaat 17953
>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence Length = 173794 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ctaccttggggaaatgattgag 407 |||||||||||||||||||||| Sbjct: 49431 ctaccttggggaaatgattgag 49452
>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence Length = 203493 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1155 gaaatgaaaatgatggagcaat 1176 |||||||||||||||||||||| Sbjct: 125470 gaaatgaaaatgatggagcaat 125491
>emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 in linkage group 1, complete sequence Length = 199490 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1351 aatttaaaagctattgacactg 1372 |||||||||||||||||||||| Sbjct: 30610 aatttaaaagctattgacactg 30589
>emb|AL974309.17| Zebrafish DNA sequence from clone DKEY-29D5 in linkage group 1, complete sequence Length = 214332 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1351 aatttaaaagctattgacactg 1372 |||||||||||||||||||||| Sbjct: 189920 aatttaaaagctattgacactg 189899
>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome Length = 192714 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1488 gtgcatcatttcatcaatatcc 1509 |||||||||||||||||||||| Sbjct: 28497 gtgcatcatttcatcaatatcc 28518
>gb|AY261361.1| African swine fever virus isolate Malawi Lil-20/1 (1983), complete genome Length = 187612 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1488 gtgcatcatttcatcaatatcc 1509 |||||||||||||||||||||| Sbjct: 25164 gtgcatcatttcatcaatatcc 25185
>gb|U03762.1|ASU03762 African swine fever virus Malawi Lil-20/1 multigene family 360 and 300 proteins (LMW2AL, LMW2BL, LMW2DL, LMW2ER, LMW2HL, LMW3BL, LMW3CL, LMW3DL, LMW3EL, LMW3FR, LMW3HL, LMW3IL, LMW3LL, LMW3NR, LMW3QR) genes, complete cds Length = 20500 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1488 gtgcatcatttcatcaatatcc 1509 |||||||||||||||||||||| Sbjct: 11551 gtgcatcatttcatcaatatcc 11572
>ref|XM_001180839.1| PREDICTED: Strongylocentrotus purpuratus similar to notch-like protein (LOC581091), mRNA Length = 4458 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 770 ttttgatcttgttgacatgtt 790 ||||||||||||||||||||| Sbjct: 278 ttttgatcttgttgacatgtt 258
>ref|XM_781110.2| PREDICTED: Strongylocentrotus purpuratus similar to notch-like protein (LOC581091), mRNA Length = 4458 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 770 ttttgatcttgttgacatgtt 790 ||||||||||||||||||||| Sbjct: 278 ttttgatcttgttgacatgtt 258
>dbj|AK233695.1| Sus scrofa mRNA, clone:LVRM10207D02, expressed in liver Length = 1933 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 495 ctcccccactccctctgccct 475
>dbj|AK236581.1| Sus scrofa mRNA, clone:OVRM10205G05, expressed in ovary Length = 1882 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 432 ctcccccactccctctgccct 412
>ref|XM_001162848.1| PREDICTED: Pan troglodytes galactose-1-phosphate uridylyltransferase, transcript variant 7 (GALT), mRNA Length = 2281 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 566 ccctctgccctcgccctcgcc 546
>gb|DQ384437.1| Homo sapiens clone fa0555 genomic sequence Length = 44952 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 13265 catttaaaggagttcatttct 13285
>gb|DQ384436.1| Homo sapiens clone fa0554 genomic sequence Length = 39777 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 513 catttaaaggagttcatttct 533
>gb|DQ384435.1| Homo sapiens clone fa0532 genomic sequence Length = 33305 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 2879 catttaaaggagttcatttct 2899
>gb|DQ384433.1| Homo sapiens clone fa0530 genomic sequence Length = 38690 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 43 catttaaaggagttcatttct 63
>ref|XM_222048.4| PREDICTED: Rattus norvegicus similar to Hypothetical protein MGC28888 (LOC304361), mRNA Length = 3306 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 1788 ctcccccactccctctgccct 1768
>ref|XM_001067470.1| PREDICTED: Rattus norvegicus similar to Hypothetical protein MGC28888 (LOC304361), mRNA Length = 3306 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 1788 ctcccccactccctctgccct 1768
>ref|NM_124679.1| Arabidopsis thaliana TAP46 (2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD) (TAP46) mRNA, complete cds Length = 1457 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 1278 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 1337 Query: 1350 t 1350 | Sbjct: 1338 t 1338
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1264 cagaagaggagaaagcaagggcatg 1288 |||||||||||||||||| |||||| Sbjct: 5586 cagaagaggagaaagcaaaggcatg 5562
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1186 gtaccgccaagatgattcaagaggc 1210 |||||||||||||||||| |||||| Sbjct: 1854099 gtaccgccaagatgattcgagaggc 1854123
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tatatagacaggggcagtctgaaac 544 ||||||||||||| ||||||||||| Sbjct: 161839 tatatagacagggtcagtctgaaac 161863
>gb|AC120843.11| Mus musculus chromosome 12, clone RP23-71C5, complete sequence Length = 220627 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 712 atggagaggaagaaagagagg 732 ||||||||||||||||||||| Sbjct: 33591 atggagaggaagaaagagagg 33611
>gb|AC148311.2| Pan troglodytes BAC clone RP43-29P9 from 7, complete sequence Length = 161683 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 115015 catttaaaggagttcatttct 114995
>gb|AY532110.1| Homo sapiens interleukin 11 receptor, alpha (IL11RA) gene, complete cds Length = 11574 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 154 ccctctgccctcgccctcgcc 134
>gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, complete sequence Length = 152884 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 54893 catttaaaggagttcatttct 54873
>gb|AC146511.3| Pan troglodytes BAC clone RP43-72N15 from 7, complete sequence Length = 192395 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 catttaaaggagttcatttct 476 ||||||||||||||||||||| Sbjct: 63345 catttaaaggagttcatttct 63365
>ref|XM_844626.1| PREDICTED: Canis familiaris similar to bin3, bicoid-interacting 3, transcript variant 2 (LOC489839), mRNA Length = 2603 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 1152 ctcccccactccctctgccct 1132
>ref|XM_854481.1| PREDICTED: Canis familiaris similar to bin3, bicoid-interacting 3, transcript variant 3 (LOC489839), mRNA Length = 1744 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 293 ctcccccactccctctgccct 273
>ref|XM_546957.2| PREDICTED: Canis familiaris similar to bin3, bicoid-interacting 3, transcript variant 1 (LOC489839), mRNA Length = 2657 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 1206 ctcccccactccctctgccct 1186
>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence Length = 275852 Score = 42.1 bits (21), Expect = 5.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1266 gaagaggagaaagcaagggcatgggatga 1294 ||||| |||||||||||||| |||||||| Sbjct: 145267 gaagaagagaaagcaagggcttgggatga 145295
>ref|XM_461653.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G03014g) partial mRNA Length = 1167 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1286 atgggatgactggaaggatga 1306 ||||||||||||||||||||| Sbjct: 1104 atgggatgactggaaggatga 1124
>gb|AC083797.16| Homo sapiens 3 BAC RP11-114A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157113 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1057 gtgggggactcaccagtgaga 1077 ||||||||||||||||||||| Sbjct: 152459 gtgggggactcaccagtgaga 152479
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1322 aggcaacaagaagcttactcc 1342 ||||||||||||||||||||| Sbjct: 637242 aggcaacaagaagcttactcc 637222
>emb|AL162231.20| Human DNA sequence from clone RP11-195F19 on chromosome 9 Contains the GALT gene for galactose-1-phosphate uridylytransferase, the IL11RA gene for interleukin 11 receptor, alpha, the SCYA27, SCYA19 and SCYA21 genes for small inducible cytokine subfamily A (Cys-Cys) members 27, 19 and 21, three novel genes and four CpG islands, complete sequence Length = 186433 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 7739 ccctctgccctcgccctcgcc 7719
>emb|AL133375.25| Human DNA sequence from clone RP3-330M21 on chromosome 6 Contains the 3' end of the SRF gene for serum response factor (c-fos serum response element-binding transcription factor), a gene for a novel protein (KIAA0076 KIAA0708), the gene for a putative c-Myc-responsive protein (RCL), the gene for KIAA1855 protein and CpG islands, complete sequence Length = 117071 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ctccagctcctccctcgacca 253 ||||||||||||||||||||| Sbjct: 80708 ctccagctcctccctcgacca 80688
>gb|U27835.1|DDU27835 Diphyllobothrium dendriticum clone pDidact4 actin mRNA, complete cds Length = 1312 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 cgcctccagctcctccctcga 250 ||||||||||||||||||||| Sbjct: 728 cgcctccagctcctccctcga 748
>gb|U27833.1|DDU27833 Diphyllobothrium dendriticum clone pDidact2 actin mRNA, complete cds Length = 1238 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 cgcctccagctcctccctcga 250 ||||||||||||||||||||| Sbjct: 709 cgcctccagctcctccctcga 729
>gb|AC159229.2| Mus musculus BAC clone RP24-351I2 from chromosome 12, complete sequence Length = 134517 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 712 atggagaggaagaaagagagg 732 ||||||||||||||||||||| Sbjct: 96166 atggagaggaagaaagagagg 96186
>gb|BT006150.1| Arabidopsis thaliana clone U20629 putative PP2A regulatory subunit (At5g53000) mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 1156 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 1215 Query: 1350 t 1350 | Sbjct: 1216 t 1216
>gb|AY085863.1| Arabidopsis thaliana clone 19116 mRNA, complete sequence Length = 1457 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 1278 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 1337 Query: 1350 t 1350 | Sbjct: 1338 t 1338
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1286 atgggatgactggaaggatga 1306 ||||||||||||||||||||| Sbjct: 219300 atgggatgactggaaggatga 219320
>emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in linkage group 17, complete sequence Length = 216647 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 cacaggaccatttaaaggagt 468 ||||||||||||||||||||| Sbjct: 173208 cacaggaccatttaaaggagt 173228
>gb|AC146411.4| Pan troglodytes BAC clone RP43-36G22 from chromosome 7, complete sequence Length = 162946 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 688 gggaagaagatgatttggagg 708 ||||||||||||||||||||| Sbjct: 47708 gggaagaagatgatttggagg 47688
>gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6, U145C10, U169A5, U84H1, U24D12, U80A7, U153E6, L35485, and R7-163A8 containing iduronate 2-sulfatase gene and pseudogene, complete sequence Length = 326663 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 697 atgatttggagggcgatggagagga 721 |||||||| |||||||||||||||| Sbjct: 133806 atgatttgaagggcgatggagagga 133782
>gb|BT004072.1| Arabidopsis thaliana clone RAFL15-22-G20 (R20629) putative PP2A regulatory subunit (At5g53000) mRNA, complete cds Length = 1546 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 1273 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 1332 Query: 1350 t 1350 | Sbjct: 1333 t 1333
>dbj|AB018116.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNB8 Length = 46872 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 9197 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 9138 Query: 1350 t 1350 | Sbjct: 9137 t 9137
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1322 aggcaacaagaagcttactcc 1342 ||||||||||||||||||||| Sbjct: 23125 aggcaacaagaagcttactcc 23105
>ref|XM_566910.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide biosynthesis-related protein (CNA06790) partial mRNA Length = 1918 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1186 gtaccgccaagatgattcaagaggc 1210 |||||||||||||||||| |||||| Sbjct: 140 gtaccgccaagatgattcgagaggc 164
>emb|BX831385.1|CNS09YV4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1453 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 1245 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 1304 Query: 1350 t 1350 | Sbjct: 1305 t 1305
>dbj|AK067241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G22, full insert sequence Length = 2591 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1322 aggcaacaagaagcttactcc 1342 ||||||||||||||||||||| Sbjct: 248 aggcaacaagaagcttactcc 228
>gb|BC088435.1| Rattus norvegicus similar to Hypothetical protein MGC28888, mRNA (cDNA clone IMAGE:7125256), partial cds Length = 1537 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ctcccccactccctctgccct 75 ||||||||||||||||||||| Sbjct: 105 ctcccccactccctctgccct 85
>emb|AJ340526.1|HSA340526 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XC20R Length = 697 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 20 ccctctgccctcgccctcgcc 40
>emb|AJ338830.1|HSA338830 Homo sapiens genomic sequence surrounding NotI site, clone NR1-SE5C Length = 654 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 20 ccctctgccctcgccctcgcc 40
>emb|AJ338829.1|HSA338829 Homo sapiens genomic sequence surrounding NotI site, clone NR1-RN24C Length = 644 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 20 ccctctgccctcgccctcgcc 40
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence Length = 117378 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1264 cagaagaggagaaagcaagggcatg 1288 |||||||||||||||||| |||||| Sbjct: 6059 cagaagaggagaaagcaaaggcatg 6083
>gb|AF133708.1|AF133708 Arabidopsis thaliana PP2A regulatory subunit (TAP46) mRNA, complete cds Length = 1553 Score = 42.1 bits (21), Expect = 5.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1290 gatgactggaaggatgaaaacccacgcggcgcaggcaacaagaagcttactccatgtggc 1349 ||||| ||||||||||| || || ||||| ||||| |||||||| || || || |||||| Sbjct: 1272 gatgattggaaggatgataatcctcgcggtgcaggtaacaagaaactcacaccttgtggc 1331 Query: 1350 t 1350 | Sbjct: 1332 t 1332
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 218 cctccacgcgctcgcctccagctcc 242 ||||| ||||||||||||||||||| Sbjct: 149007 cctcctcgcgctcgcctccagctcc 148983
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tatatagacaggggcagtctgaaac 544 ||||||||||||| ||||||||||| Sbjct: 10147 tatatagacagggtcagtctgaaac 10171
>emb|AJ343738.1|HSA343738 Homo sapiens genomic sequence surrounding NotI site, clone NR1-RG11C Length = 650 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 20 ccctctgccctcgccctcgcc 40
>emb|AJ343121.1|HSA343121 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KD1R Length = 874 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccctctgccctcgccctcgcc 85 ||||||||||||||||||||| Sbjct: 20 ccctctgccctcgccctcgcc 40 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 278,116,202 Number of extensions: 15715162 Number of successful extensions: 323275 Number of sequences better than 10.0: 86 Number of HSP's gapped: 323269 Number of HSP's successfully gapped: 151 Length of query: 1541 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1518 Effective length of database: 18,503,978,556 Effective search space: 28089039448008 Effective search space used: 28089039448008 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
