ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6a02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g51700:12003.t04497:unspliced-genomic expressed protein| Length = 2830 Score = 100 bits (214), Expect(6) = 5e-71 Identities = 42/46 (91%), Positives = 43/46 (93%) Frame = +2 / +3 Query: 578 VHPLQVEVGELKGRLTEVISNCDALCKRITAEGPESLRRSVEPFTT 715 V PLQVEVGELKGRLTEVISNCDALCKRI AEGPESLR SV+PFTT Sbjct: 2001 VRPLQVEVGELKGRLTEVISNCDALCKRIAAEGPESLRSSVQPFTT 2138 Score = 81.3 bits (171), Expect(6) = 5e-71 Identities = 34/38 (89%), Positives = 37/38 (97%) Frame = +2 / +1 Query: 464 QGELENKIETADALAVKLLQRFNYSVTSMRSTSHNLAE 577 Q E+ENKIETADAL++KLLQRFNYSVTSMRSTSHNLAE Sbjct: 1642 QEEIENKIETADALSIKLLQRFNYSVTSMRSTSHNLAE 1755 Score = 73.5 bits (154), Expect(6) = 5e-71 Identities = 32/46 (69%), Positives = 35/46 (76%) Frame = +2 / +2 Query: 161 QQQQRPQWADEITTVSDGRRDAVDEDPLLRRIRSLTIAPPLLSSQP 298 QQQ+RP WADEITTVS+GRRDA D DPLL RI+SLTI L P Sbjct: 182 QQQRRPPWADEITTVSEGRRDAGDGDPLLHRIKSLTIVRT*LPRPP 319 Score = 46.0 bits (94), Expect(6) = 5e-71 Identities = 20/26 (76%), Positives = 21/26 (80%) Frame = +2 / +3 Query: 272 APPLLSSQPAAGSETETSFTDILVRK 349 APPLLS Q AA SE E+S TDILVRK Sbjct: 396 APPLLSGQSAASSEAESSLTDILVRK 473 Score = 46.0 bits (94), Expect(6) = 5e-71 Identities = 21/30 (70%), Positives = 23/30 (76%) Frame = +3 / +3 Query: 378 AI*AQI*CLSFSPCTVNGKKRWPRKSVEDR 467 A * Q+*C SFS CTVNGKKR PRK V+ R Sbjct: 660 AT*IQM*CSSFSLCTVNGKKRRPRKLVKHR 749 Score = 29.9 bits (59), Expect(6) = 5e-71 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2 / +2 Query: 131 MGASESLLARQQQQR 175 MGASES+L+R QQQR Sbjct: 149 MGASESILSRPQQQR 193 Score = 90.9 bits (192), Expect(7) = 9e-61 Identities = 40/47 (85%), Positives = 43/47 (91%) Frame = -1 / -1 Query: 714 VVKGSTDLRKLSGPSAVILLHSASQLLITSVNLPFNSPTSTCSG*TS 574 VVKG TD R+LSGPSA ILLH+ASQLLITSVNLPFNSPTSTCSG T+ Sbjct: 2137 VVKG*TDDRRLSGPSAAILLHNASQLLITSVNLPFNSPTSTCSGRTA 1997 Score = 68.0 bits (142), Expect(7) = 9e-61 Identities = 32/38 (84%), Positives = 33/38 (86%) Frame = -1 / -3 Query: 576 SARL*EVDLIEVTE*LNRWRSLTANASAVSILFSSSPC 463 SARL*EVDL+EVTE*LNRWRSL ASAVSILFS S C Sbjct: 1754 SARL*EVDLMEVTE*LNRWRSLMDKASAVSILFSISSC 1641 Score = 61.1 bits (127), Expect(7) = 9e-61 Identities = 24/31 (77%), Positives = 27/31 (87%) Frame = -2 / -3 Query: 470 LPVFH*FPWPSLLAIHGTWRKAQTSDLGSNC 378 +PVFH*F WPSLLAIHGT RKA+TS L S+C Sbjct: 752 IPVFH*FSWPSLLAIHGTERKARTSHLDSSC 660 Score = 46.9 bits (96), Expect(7) = 9e-61 Identities = 20/25 (80%), Positives = 21/25 (84%) Frame = -3 / -3 Query: 346 PDKDVSEAGLRLRARRWLTAQQRRG 272 PD+DV EA LRLRARR L AQQRRG Sbjct: 470 PDEDVGEAALRLRARRRLAAQQRRG 396 Score = 37.3 bits (75), Expect(7) = 9e-61 Identities = 14/16 (87%), Positives = 14/16 (87%) Frame = -1 / -2 Query: 207 DTVVISSAHCGRCCCC 160 DTVVISSAH GR CCC Sbjct: 228 DTVVISSAHGGRRCCC 181 Score = 34.1 bits (68), Expect(7) = 9e-61 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -3 / -1 Query: 271 DGK*PDAAEERVFVHGVAPAVGH 203 DG+ DA EE V V GVAPA+GH Sbjct: 292 DGEGLDAVEEGVSVPGVAPALGH 224 Score = 22.6 bits (43), Expect(7) = 9e-61 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -3 / -1 Query: 160 PGQ*RFGSPHGM 125 PG+ R GSPH M Sbjct: 178 PGEDRLGSPHVM 143 Score = 85.4 bits (180), Expect(6) = 2e-50 Identities = 32/45 (71%), Positives = 35/45 (77%) Frame = -3 / -3 Query: 721 YASGERFNRPSQTFWPFCSNPLAQCVAITYYFS*PALQFTNFHLQ 587 + SGER NR SQTFW F N LAQC+ +TYYF *PALQ TNFHLQ Sbjct: 2144 FTSGERLNRRSQTFWTFSGNSLAQCITVTYYFG*PALQLTNFHLQ 2010 Score = 64.3 bits (134), Expect(6) = 2e-50 Identities = 27/40 (67%), Positives = 31/40 (77%) Frame = -3 / -2 Query: 583 MNFSKIVRG*SHRSNGVIEPLEKFNSQCICRFYLIF*LSL 464 + FSK+VRG*SH SN +IEPLEK N Q IC FYL+F L L Sbjct: 1761 VTFSKVVRG*SHGSNRIIEPLEKLNGQSICCFYLVFYLFL 1642 Score = 54.2 bits (112), Expect(6) = 2e-50 Identities = 22/30 (73%), Positives = 23/30 (76%) Frame = -1 / -2 Query: 465 CLPLISLAISSCHSRYMAKSSNIRFGLKLP 376 C+ LI LA SSCHSRY KSSNI FG KLP Sbjct: 747 CVSLIFLAFSSCHSRYREKSSNITFGFKLP 658 Score = 46.4 bits (95), Expect(6) = 2e-50 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = -1 / -1 Query: 363 EDPEGFRTRMSVKLVSVSEPAAG*LLNSGGA 271 E+ +GFRTRMSV+L+S SE AA LNSGGA Sbjct: 487 EEEDGFRTRMSVRLLSASELAADWPLNSGGA 395 Score = 30.4 bits (60), Expect(6) = 2e-50 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 / -2 Query: 201 VVISSAHCGRCCCCLASRDSEAPM 130 V+ S+ RCCC L DSEAPM Sbjct: 219 VISSAHGGRRCCCGLERIDSEAPM 148 Score = 25.8 bits (50), Expect(6) = 2e-50 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -2 / -3 Query: 272 RW*VTGCGGGEGL 234 RW* T CGGG GL Sbjct: 293 RW*GT*CGGGGGL 255 Score = 75.3 bits (158), Expect(6) = 1e-35 Identities = 34/54 (62%), Positives = 38/54 (70%) Frame = +3 / +1 Query: 573 LKFIRCRWKLVN*RAG*LK**VIATHCARGLLQKGQKVCEGLLNLSPLAYWGPE 734 L+ + CRWKLV+*RAG* K**V HCAR L K QKVC+ L NLSPL W E Sbjct: 1996 LQSVHCRWKLVS*RAG*PK**VTVMHCARELPLKVQKVCDRLFNLSPLVKWSQE 2157 Score = 48.3 bits (99), Expect(6) = 1e-35 Identities = 26/38 (68%), Positives = 29/38 (76%) Frame = +3 / +2 Query: 465 RES*KIR*KRQMHWLLNFSSGSITPLLR*DQPLTILLK 578 R+ *K R*K+QM L+FSSGSI LL *DQPLT LLK Sbjct: 1643 RKR*KTR*KQQMLCPLSFSSGSIILLLP*DQPLTTLLK 1756 Score = 44.6 bits (91), Expect(6) = 1e-35 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +2 / +2 Query: 398 MFELFAMYREWQEEMAKEISGRQ 466 MFELF++YREWQEE AK+IS Q Sbjct: 680 MFELFSLYREWQEEKAKKISETQ 748 Score = 35.0 bits (70), Expect(6) = 1e-35 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +3 / +3 Query: 204 CPTAGATPWTKTLSSAASGHLPS 272 CP AGATP T+T SS AS PS Sbjct: 225 CPRAGATPGTETPSSTASSPSPS 293 Score = 26.3 bits (51), Expect(6) = 1e-35 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3 / +3 Query: 123 PIPWGLPNLYWPG 161 PI WGLP+L PG Sbjct: 141 PITWGLPSLSSPG 179 Score = 26.3 bits (51), Expect(6) = 1e-35 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +1 / +1 Query: 181 VGGRDHDGV 207 VGGRDHDGV Sbjct: 202 VGGRDHDGV 228 Score = 79.4 bits (167), Expect(3) = 4e-32 Identities = 35/59 (59%), Positives = 42/59 (71%) Frame = -2 / -2 Query: 734 LRSPVCQW*KVQQTFANFLALLQ*SSCTVRRNYLLLQLTCPSIHQLPPAADELQQDCER 558 L +P W*KV+QT A+FL L + SCT+ +YLLL+LTCPS HQLPPA D LQ ER Sbjct: 2157 LLAPFY*W*KVEQTIADFLDLQRQFSCTMHHSYLLLRLTCPSTHQLPPAVDGLQCPVER 1981 Score = 56.1 bits (116), Expect(3) = 4e-32 Identities = 27/38 (71%), Positives = 30/38 (78%) Frame = -2 / -1 Query: 578 LQQDCERLISSK*RSN*TAGEV*QPMHLPFLSYFLALP 465 LQQ CERLIS K*++N*TAGE * HL FLS FL+LP Sbjct: 1756 LQQGCERLISWK*QNN*TAGEA*WTKHLLFLSCFLSLP 1643 Score = 50.1 bits (103), Expect(3) = 4e-32 Identities = 20/30 (66%), Positives = 23/30 (76%) Frame = -3 / -1 Query: 466 LSSTDFLGHLFLPFTVHGEKLKHQIWAQIA 377 L T+FLG LFLPFTV EKL+H IW Q+A Sbjct: 748 LCFTNFLGLLFLPFTVQREKLEHHIWIQVA 659 Score = 52.8 bits (109), Expect(4) = 8e-20 Identities = 27/45 (60%), Positives = 31/45 (68%) Frame = +1 / +2 Query: 601 W*IEGQVN*SNK*LRRTVQEDYCRRARKFAKVC*TFHHWHTGDRR 735 W*+EGQVN SNK*L VQE+ R+RK A VC TFHH G +R Sbjct: 2024 W*VEGQVNRSNK*L*CIVQENCR*RSRKSAIVCSTFHH**NGAKR 2158 Score = 47.3 bits (97), Expect(4) = 8e-20 Identities = 22/32 (68%), Positives = 22/32 (68%) Frame = +1 / +3 Query: 466 GRARK*DRNGRCIGC*TSPAVQLLRYFDEINL 561 GR RK DRN RC * SPAVQL YF EINL Sbjct: 1644 GRDRKQDRNSRCFVH*ASPAVQLFCYFHEINL 1739 Score = 39.6 bits (80), Expect(4) = 8e-20 Identities = 21/40 (52%), Positives = 25/40 (62%) Frame = +1 / +1 Query: 349 TLRILLSRLWQFEPKSDV*AFRHVP*MARRDGQGNQWKTG 468 +L +L+ Q E K DV AF VP*MARR+GQ N TG Sbjct: 631 SLSVLVIICRQLESKCDVRAFLSVP*MARREGQEN**NTG 750 Score = 23.5 bits (45), Expect(4) = 8e-20 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +1 / +1 Query: 124 PSHGGFRI 147 PSHGGFR+ Sbjct: 142 PSHGGFRV 165
>LOC_Os04g31950:12004.t02875:unspliced-genomic small nuclear ribonucleoprotein F, putative, expressed| Length = 5336 Score = 41.4 bits (84), Expect = 0.012 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = -1 / +2 Query: 471 SPCLPLISLAISSCHSRYMAKSSNIRFGLKLPEAAEEDPEGFRTRMS 331 SPC PL SL + SC +R + S + FG+ LP P RT S Sbjct: 2651 SPCQPLSSLCLMSCGTRCSRRPS*LPFGMTLPRGQNRRPGRSRTASS 2791
>LOC_Os03g51710:12003.t04498:unspliced-genomic KNOX1 domain containing protein, expressed| Length = 6460 Score = 40.0 bits (81), Expect = 0.030 Identities = 16/19 (84%), Positives = 17/19 (89%) Frame = +2 / -1 Query: 659 RITAEGPESLRRSVEPFTT 715 RI AEGPESLR SV+PFTT Sbjct: 6460 RIAAEGPESLRSSVQPFTT 6404 Score = 36.3 bits (73), Expect = 0.38 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -3 / +2 Query: 721 YASGERFNRPSQTFWPFCSN 662 + SGER NR SQTFW F N Sbjct: 6398 FTSGERLNRRSQTFWTFSGN 6457 Score = 33.6 bits (67), Expect = 2.5 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +3 / -2 Query: 672 KGQKVCEGLLNLSPLAYWGPE 734 K QKVC+ L NLSPL W E Sbjct: 6447 KVQKVCDRLFNLSPLVKWSQE 6385
>LOC_Os03g20310:12003.t01790:unspliced-genomic transcription factor HBP-1b, putative, expressed| Length = 5369 Score = 38.2 bits (77), Expect = 0.11 Identities = 17/32 (53%), Positives = 21/32 (65%) Frame = -2 / -3 Query: 143 RKPPWDGSSVVAGSRKERKARERRPGEAAGVG 48 R PP S+V AGSR++R+ RER G A VG Sbjct: 141 RPPPRAASAVEAGSRRQREEREREMGGGAEVG 46
>LOC_Os03g05570:12003.t00429:unspliced-genomic RING-H2 finger protein ATL3F, putative, expressed| Length = 1158 Score = 28.1 bits (55), Expect(2) = 0.45 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 / -1 Query: 13 GNSLRPRRGVLRPTPAASPGRR 78 G + RPRR + RP AS GRR Sbjct: 213 GAAARPRRRLRRPCHGASSGRR 148 Score = 25.4 bits (49), Expect(2) = 0.45 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +3 / -1 Query: 204 CPTAGATPW 230 C TAGATPW Sbjct: 63 CRTAGATPW 37
>LOC_Os08g10540:12008.t00938:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4422 Score = 35.4 bits (71), Expect = 0.71 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 / +3 Query: 131 WDGSSVVAGSRKERKARERRPGEAAGV 51 WD SS GSR ERK E+R G A V Sbjct: 363 WDSSSKERGSRAERKGEEKRRGGAGAV 443
>LOC_Os03g49170:12003.t04268:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 3605 Score = 35.4 bits (71), Expect = 0.71 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -1 / +1 Query: 780 AYLCPQGWSFGSGDPPPVPSMPVVKGSTDLRKLSGPSAVILLHSASQLLITSVNL 616 +++C FG+ PPP P +P G DLR S + V+ +AS+ + L Sbjct: 250 SFICFYSGIFGAFSPPPPPDLPRHGGCGDLRADSVDAGVVRWFAASRAAAAAARL 414
>LOC_Os12g28590:12012.t02569:unspliced-genomic cell Division Protein AAA ATPase family, putative, expressed| Length = 1855 Score = 34.5 bits (69), Expect(2) = 0.86 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 / -3 Query: 979 HTYAQRKLSTTSLQQERLNSNERIPIIQSI*RSLMAHLAHLRM 851 H A KLSTTS R+ +P++QS SL A AH R+ Sbjct: 476 HMRAPSKLSTTS*FSSRVTIGSSLPLLQSSALSLQAPPAHTRL 348 Score = 22.1 bits (42), Expect(2) = 0.86 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = -2 / -1 Query: 422 GTWRKAQTSDLGSNCQRRLR 363 G WR+ QTS RR R Sbjct: 346 GRWRRRQTSCCVGTAPRRTR 287
>LOC_Os01g68090:12001.t06166:unspliced-genomic harpin-induced protein, putative| Length = 1368 Score = 35.0 bits (70), Expect = 0.98 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 / +3 Query: 155 PVEIRKPPWDGSSVVAGSRKERKARERRPGEAA 57 P + P +GS+ +AGSR+ R+ RPGE A Sbjct: 198 PTHSFRDPSNGSAAIAGSRRRRRRGGSRPGEEA 296
>LOC_Os01g38650:12001.t06810:unspliced-genomic expressed protein| Length = 1229 Score = 35.0 bits (70), Expect = 0.98 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 / +1 Query: 158 WPVEIRKPPWDGSSVVAGSRKERKARERRPGEAAGV 51 W EIR+P + + R+ R R RRPGEA + Sbjct: 280 WRCEIRRPVDESTEKAGSLRRRRLHRRRRPGEAGSL 387
>LOC_Os03g22259:12003.t05725:unspliced-genomic expressed protein| Length = 1356 Score = 29.5 bits (58), Expect(3) = 1.3 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = -1 / -3 Query: 771 CPQGWSFGSGDPPPVP 724 C GW G G PPP P Sbjct: 364 CRTGWEVGEGRPPPPP 317 Score = 22.1 bits (42), Expect(3) = 1.3 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -2 / -2 Query: 992 TVYTTHLRTKKVKHYKSTTGETE 924 TV + + K V+HY ++ ETE Sbjct: 1211 TVEHYYSKEKTVEHYNRSSTETE 1143 Score = 22.1 bits (42), Expect(3) = 1.3 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 / -2 Query: 738 PPPVPSMPV 712 PPPVPS P+ Sbjct: 137 PPPVPSPPL 111
>LOC_Os07g23150:12007.t02016:unspliced-genomic anthocyanin 5-aromatic acyltransferase, putative, expressed| Length = 2322 Score = 29.0 bits (57), Expect(3) = 1.4 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -2 / +2 Query: 449 PWPSLLAIHGTWRKAQTSDLGSNCQRRLRRIR 354 PWP I W + + GS C+RR R R Sbjct: 1034 PWPLPCTISTPWSGSCRAGYGSACRRRRSRTR 1129 Score = 23.5 bits (45), Expect(3) = 1.4 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -2 / +2 Query: 1085 FFLRTNDQICLKKRY 1041 FF +TN Q C KK Y Sbjct: 521 FFNKTNGQTCEKKVY 565 Score = 22.6 bits (43), Expect(3) = 1.4 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -3 / +2 Query: 331 SEAGLRLRARRW 296 S +G R RARRW Sbjct: 2123 SRSGWRCRARRW 2158
>LOC_Os04g58060:12004.t05269:unspliced-genomic protein arginine N-methyltransferase 6, putative, expressed| Length = 4803 Score = 26.3 bits (51), Expect(2) = 1.8 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 / -2 Query: 310 RARRWLTAQQRRGDG 266 R RWL A++RRG+G Sbjct: 215 RNPRWLAARRRRGEG 171 Score = 24.9 bits (48), Expect(2) = 1.8 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = -2 / -1 Query: 458 H*FPWPSLLAIHGTWRKAQTSDLGSNCQRRLRRIR 354 H P S L H T R LG + RL R+R Sbjct: 438 HVIPTKSRLRTHNTGRPRGCGGLGFGRRGRLNRVR 334
>LOC_Os02g08070:12002.t00703:unspliced-genomic SBP-domain protein 1, putative, expressed| Length = 3554 Score = 26.3 bits (51), Expect(2) = 2.5 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -1 / -2 Query: 174 RCCCCLASRD 145 RCCCC +RD Sbjct: 3406 RCCCCCRARD 3377 Score = 24.4 bits (47), Expect(2) = 2.5 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 / -3 Query: 128 DGSSVVAGSRKERKARERRPGEAA 57 DG++ +G + R+ R RRP AA Sbjct: 3300 DGAAASSGRCRGRRLRPRRPPPAA 3229
>LOC_Os07g10620:12007.t00936:unspliced-genomic expressed protein| Length = 1899 Score = 33.6 bits (67), Expect = 2.5 Identities = 14/19 (73%), Positives = 14/19 (73%) Frame = +1 / -3 Query: 25 RPRRGVLRPTPAASPGRRS 81 R RRG PTPAASP RRS Sbjct: 577 RTRRGRAAPTPAASPSRRS 521
>LOC_Os05g12740:12005.t01100:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 3065 Score = 33.6 bits (67), Expect = 2.5 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -1 / -2 Query: 663 ILLHSASQLLITSVNLPFNSPTSTC 589 I LH+ SQ +IT ++ F SPTSTC Sbjct: 2344 IKLHNESQSMITRLSSHFPSPTSTC 2270
>LOC_Os01g12080:12001.t01076:unspliced-genomic plant-specific domain TIGR01589 family protein, expressed| Length = 5125 Score = 33.6 bits (67), Expect = 2.5 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -1 / -3 Query: 180 CGRCCCCLASRDSEAP 133 C RCCCC A R E P Sbjct: 86 CARCCCCCARRTPETP 39
>LOC_Os06g39470:12006.t03645:unspliced-genomic 10-deacetylbaccatin III 10-O-acetyltransferase, putative, expressed| Length = 1671 Score = 29.0 bits (57), Expect(2) = 2.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 / -1 Query: 125 GSSVVAGSRKERKARERRPGEAAGVG 48 G VVA R+ +A +RR G GVG Sbjct: 243 GDGVVAHERRRERALDRRGGRHGGVG 166 Score = 25.8 bits (50), Expect(2) = 2.6 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -1 / -1 Query: 510 TANASAVSILFSSSPCLPLISLAISSCHSRYMAKSSNIRFGLKL 379 TA + A+++ ++P I+ ISS Y+ K FG++L Sbjct: 549 TAQSHAIAMTLPTNPLTTRIAREISSPLLSYLDKEDERVFGVRL 418
>LOC_Os01g59900:12001.t05377:unspliced-genomic expressed protein| Length = 3385 Score = 27.2 bits (53), Expect(3) = 2.6 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -1 / -3 Query: 195 ISSAHCGRCCCC 160 +S CG CCCC Sbjct: 2510 VSCLFCGYCCCC 2475 Score = 24.9 bits (48), Expect(3) = 2.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -3 / -3 Query: 979 HTYAQRKLSTTSLQQERLNSNE 914 HTY +R+LS TSL+ S + Sbjct: 3128 HTYFERQLSITSLRMFNKRSKQ 3063 Score = 23.1 bits (44), Expect(3) = 2.6 Identities = 5/13 (38%), Positives = 7/13 (53%) Frame = -1 / -3 Query: 171 CCCCLASRDSEAP 133 CCCC ++ P Sbjct: 2480 CCCCYCGENASCP 2442
>LOC_Os12g15060:12012.t01363:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7956 Score = 33.1 bits (66), Expect = 3.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 / -2 Query: 577 FSKIVRG*SHRSNGVIEPLEKFNSQCICRFYLIF 476 F ++V G S+ V PL +F S C R+YL+F Sbjct: 176 FWELVAGRLQSSSSVAPPLSEFPSSCSSRWYLLF 75
>LOC_Os12g09410:12012.t00820:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 1497 Score = 33.1 bits (66), Expect = 3.5 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 / +1 Query: 856 RMDILPCYLRSSLQCLLYHQLFRQSGIFVSSGLVF 752 +M PC +R +++CL+ + + SGIF G F Sbjct: 1057 KMPSPPCLIRMAIRCLIMKEKLQSSGIFTKIGWEF 1161
>LOC_Os09g07460:12009.t00542:unspliced-genomic tip elongation aberrant protein 1, putative, expressed| Length = 2489 Score = 33.1 bits (66), Expect = 3.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 / -2 Query: 143 RKPPWDGSSVVAGSRKERK 87 R+PPW GSS AG R+ R+ Sbjct: 1633 RRPPWSGSSGAAGRRRRRR 1577
>LOC_Os05g46760:12005.t04161:unspliced-genomic mitogen-activated protein kinase kinase kinase 1, putative,| expressed Length = 1419 Score = 33.1 bits (66), Expect = 3.5 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / +3 Query: 143 RKPPWDGSSVVAGSRKERKARERRPGEAAGV 51 R PP DG+ +E + R RRPGEA G+ Sbjct: 462 RVPPRDGAGARGRQGEECRDRRRRPGEARGL 554
>LOC_Os02g38320:12002.t03470:unspliced-genomic protein binding protein, putative, expressed| Length = 2086 Score = 33.1 bits (66), Expect = 3.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 / +1 Query: 137 PPWDGSSVVAGSRKERKARERRPGEAAG 54 PPW SS + + R+ R R P AAG Sbjct: 844 PPWSASSPAPPTDRHRRCRRRAPASAAG 927
>LOC_Os11g46960:12011.t04171:unspliced-genomic receptor-like protein kinase precursor, putative, expressed| Length = 3700 Score = 33.1 bits (66), Expect = 3.5 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -1 / +3 Query: 180 CGRCCCCLASRDSE 139 CG CCCC +SRD + Sbjct: 63 CGCCCCCFSSRDEQ 104
>LOC_Os04g45310:12004.t04065:unspliced-genomic ligA, putative| Length = 1833 Score = 31.8 bits (63), Expect(2) = 3.8 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = -3 / +1 Query: 322 GLRLRARRWLTAQQRRGDGK*PDAAEER 239 G R ARRW TA Q R G AA+ER Sbjct: 181 GTRTAARRWRTAAQERRHGGTGTAAQER 264 Score = 22.6 bits (43), Expect(2) = 3.8 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -1 / +1 Query: 69 GRSCRSWTEDTATGSQGIS*AAS 1 G R W E TAT G S AA+ Sbjct: 703 GGDGRHWRETTATRGDGDSVAAA 771
>LOC_Os12g28710:12012.t02581:unspliced-genomic cell Division Protein AAA ATPase family, putative, expressed| Length = 1709 Score = 32.7 bits (65), Expect = 4.8 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -3 / -3 Query: 979 HTYAQRKLSTTSLQQERLNSNERIPIIQSI*RSLMAHLAHLRM 851 H A KLSTTS R+ + + ++QS SL A AH R+ Sbjct: 462 HMRAPSKLSTTSWFSSRVTTGSSLVLLQSSALSLQAPPAHTRL 334
>LOC_Os08g20440:12008.t004305:unspliced-genomic expressed protein| Length = 5084 Score = 32.7 bits (65), Expect = 4.8 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 / +1 Query: 553 SHRSNGVIEPLEKFNSQCICRFYLIF*LSLSSTDFLGHLFLPFTVHGEKL 404 +H SN +++PL+ +S+CI R + F L + LF F+ G L Sbjct: 1810 AHNSNPILQPLKLVSSKCIAR*IVYFELETVGYELFTCLFGVFSDRGTLL 1959
>LOC_Os06g17530:12006.t01625:unspliced-genomic PE-PGRS family protein, putative| Length = 1658 Score = 32.7 bits (65), Expect = 4.8 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 / +3 Query: 134 PWDGSSVVAGSRKERKARERRPGEAA 57 PW G S V+G R ARERR AA Sbjct: 1020 PWRGGSAVSGDGDRRAARERRHAWAA 1097
>LOC_Os06g05490:12006.t00437:unspliced-genomic PE-PGRS family protein, putative| Length = 690 Score = 32.7 bits (65), Expect = 4.8 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 / +1 Query: 134 PWDGSSVVAGSRKERKARERRPGEAA 57 PW G S V+G R ARERR AA Sbjct: 85 PWRGGSAVSGDGDRRAARERRHAWAA 162
>LOC_Os01g51360:12001.t04569:unspliced-genomic triacylglycerol lipase, putative, expressed| Length = 3121 Score = 32.7 bits (65), Expect = 4.8 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -2 / -1 Query: 125 GSSVVAGSRKERKARERRPGEAAG 54 G VAG R+ R ER PGEAAG Sbjct: 466 GDGEVAGGRELRAVEERGPGEAAG 395
>LOC_Os08g25720:12008.t02339:unspliced-genomic pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha| subunit, putative, expressed Length = 5395 Score = 32.7 bits (65), Expect = 4.8 Identities = 13/33 (39%), Positives = 24/33 (72%) Frame = -1 / -2 Query: 690 RKLSGPSAVILLHSASQLLITSVNLPFNSPTST 592 ++LSGP++ + + LLITS+++ F+S TS+ Sbjct: 2703 KELSGPNSALACTPSHILLITSISVSFDSATSS 2605
>LOC_Os06g42660:12006.t03957:unspliced-genomic expressed protein| Length = 707 Score = 24.9 bits (48), Expect(2) = 5.1 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +3 / +3 Query: 3 TPLRKFPATPSRCPPSNS 56 TP R PSR PPS+S Sbjct: 348 TPRRPSSPAPSRSPPSSS 401 Score = 24.9 bits (48), Expect(2) = 5.1 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +1 / +1 Query: 40 VLRPTPAASPGRRSLA 87 +LRP PAA+ GRR A Sbjct: 388 LLRPPPAAATGRRRRA 435
>LOC_Os06g40960:12006.t03791:unspliced-genomic zinc finger protein, putative, expressed| Length = 3365 Score = 27.2 bits (53), Expect(2) = 6.1 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +1 / +2 Query: 19 SLRPRRGVLRPTPAASP 69 SLR RR LRPTP SP Sbjct: 344 SLRRRRRRLRPTPPPSP 394 Score = 22.1 bits (42), Expect(2) = 6.1 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = +1 / +1 Query: 49 PTPAASPGRRSLAFLSFLDPATTELPSH 132 P P +SP R L L P+TT H Sbjct: 421 PPPPSSPPIREALPLLSLTPSTTHDDDH 504
>LOC_Os04g37650:12004.t03335:unspliced-genomic fucosyltransferase 7, putative, expressed| Length = 2350 Score = 31.3 bits (62), Expect(2) = 6.2 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = -1 / -2 Query: 849 TSSRAIYVVPCNAFYITSCSDNQAYLCPQGWSFGSGDPPPVP 724 TS + ++ +AF++ SCS + GW+ + PP P Sbjct: 1809 TSEKLSSIISASAFWLCSCSPERCRSRCVGWNTLTDSPPAAP 1684 Score = 22.6 bits (43), Expect(2) = 6.2 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 / -3 Query: 653 TVRRNYLLLQLTC 615 T RNYLLL++ C Sbjct: 410 TYLRNYLLLRMQC 372
>LOC_Os12g35410:12012.t03230:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5447 Score = 32.2 bits (64), Expect = 6.6 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -3 / -3 Query: 850 DILPCYLRSSLQCLLYHQ 797 DILP +L SSL C +YHQ Sbjct: 3711 DILPSHLDSSLPCTVYHQ 3658
>LOC_Os05g08400:12005.t00720:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein, expressed| Length = 2708 Score = 32.2 bits (64), Expect = 6.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 / +2 Query: 754 FWVRGSTSGPQYASGERFNRPSQTFW 677 FW++GS ++A G RFNR + +W Sbjct: 326 FWLQGSKCEYRHADGARFNRRNCWYW 403
>LOC_Os03g58610:12003.t05115:unspliced-genomic expressed protein| Length = 2281 Score = 32.2 bits (64), Expect = 6.6 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = +2 / -1 Query: 422 REWQEEMAKEISGRQGELENKIETADALAVKLLQRFNYSVTSMRSTSHNLAEVHPLQVEV 601 R W + GRQG +E+ + A + ++ V +MRS++ + EV L+ + Sbjct: 604 RGWNVAEGSQRLGRQGIMESDLPMAS*TR*RWVRLRRQEVKTMRSSATDWTEVCRLRARL 425 Query: 602 GELKGRLTE 628 G+ K TE Sbjct: 424 GKSKSCKTE 398
>LOC_Os03g48540:12003.t04211:unspliced-genomic expressed protein| Length = 5762 Score = 32.2 bits (64), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 / +1 Query: 482 YFLALPVFH*FPWPSLL 432 Y+L L ++H FPWPS L Sbjct: 526 YYLCLSIYHEFPWPSRL 576
>LOC_Os03g11790:12003.t00980:unspliced-genomic F-box domain containing protein, expressed| Length = 7028 Score = 32.2 bits (64), Expect = 6.6 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -2 / -3 Query: 500 HLPFLSYFLALPVFH*FPWPSLLAIH 423 +LPFL + L LP P P+LLAIH Sbjct: 3777 YLPFLRFHLPLPYSSSSPSPTLLAIH 3700
>LOC_Os03g63950:12003.t05661:unspliced-genomic plastid-specific 30S ribosomal protein 1, chloroplast precursor,| putative, expressed Length = 2596 Score = 29.0 bits (57), Expect(2) = 6.8 Identities = 16/31 (51%), Positives = 16/31 (51%) Frame = +2 / -3 Query: 248 RRIRSLTIAPPLLSSQPAAGSETETSFTDIL 340 R I L I P LSS P A T TSFT L Sbjct: 1703 RVISHLQILGPRLSSPPRAERRTSTSFTSWL 1611 Score = 24.9 bits (48), Expect(2) = 6.8 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +1 / -1 Query: 25 RPRRGVLRPTPAASPGRR 78 RPRR P P A PGRR Sbjct: 1951 RPRRRRPPPDP*AGPGRR 1898
>LOC_Os12g20390:12012.t01880:unspliced-genomic expressed protein| Length = 2633 Score = 28.6 bits (56), Expect(2) = 6.9 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +2 / +2 Query: 200 TVSDGRRDAVDEDPLLRRIRSLTIAPPLLSSQP 298 T+ GRR DP++ + + ++ PPLL ++P Sbjct: 617 TLIRGRRRREGPDPVVSTVVAASLPPPLLHARP 715 Score = 25.4 bits (49), Expect(2) = 6.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 / +2 Query: 1 GRRLGNSLRPRRGVLRPTPAASPGRRSLA 87 GRR ++ R RR +LRP+ ++ G ++A Sbjct: 335 GRRCSSTRRRRRRLLRPSSWSAFGSTAMA 421
>LOC_Os03g56320:12003.t04890:unspliced-genomic expressed protein| Length = 3368 Score = 24.9 bits (48), Expect(2) = 8.1 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = -1 / +1 Query: 180 CGRCCCCLASR 148 C RCCC L R Sbjct: 334 CSRCCCLLGCR 366 Score = 24.0 bits (46), Expect(2) = 8.1 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -1 / +1 Query: 60 CRSWTEDTATGSQ 22 CRSW E A G++ Sbjct: 361 CRSWAEGVAAGAE 399
>LOC_Os02g07810:12002.t00677:unspliced-genomic ATP binding protein, putative, expressed| Length = 2729 Score = 26.7 bits (52), Expect(2) = 8.2 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +1 / -2 Query: 46 RPTPAASPGRRS 81 RP PAASPG RS Sbjct: 181 RPAPAASPGTRS 146 Score = 22.1 bits (42), Expect(2) = 8.2 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 / -3 Query: 4 RRLGNSLRPRRGVLRP 51 RR S RPRR +RP Sbjct: 219 RRAPRSQRPRRRAVRP 172
>LOC_Os08g31090:12008.t02858:unspliced-genomic expressed protein| Length = 1256 Score = 29.0 bits (57), Expect(2) = 8.7 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 / -3 Query: 859 LRMDILPCYLRSSLQCLLYHQLFRQSGIFVSS 764 L M+++ C LRSSL CL+ + F SS Sbjct: 840 LMMELMRCSLRSSLNCLMNRSARAFTSAFPSS 745 Score = 23.5 bits (45), Expect(2) = 8.7 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = -2 / -1 Query: 143 RKPPWDGSSVVAGSRKERKARERRPGEAA 57 R+PP AGSR R RR G A Sbjct: 452 RRPPPTPPLPHAGSRSNRTPTRRRRGRGA 366
>LOC_Os07g09000:12007.t00775:unspliced-genomic sec12-like protein 1, putative, expressed| Length = 5174 Score = 31.8 bits (63), Expect = 9.0 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -2 / +3 Query: 449 PWPSLLAIHGTWRKAQTSDLGSNCQRRLRRIRRVSGQG 336 PW + G WR + S G +RR RR G+G Sbjct: 210 PWQAAEVARGRWRARRGSGAGRRRRRRRASSRRTGGRG 323
>LOC_Os11g46980:12011.t04173:unspliced-genomic receptor-like protein kinase precursor, putative| Length = 5028 Score = 31.8 bits (63), Expect = 9.1 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 / +3 Query: 183 HCGRCCCCLASRDSE 139 HCG CCCC SR + Sbjct: 4722 HCGCCCCCSFSRSEQ 4766
>LOC_Os09g35790:12009.t03057:unspliced-genomic heat shock factor protein 7, putative, expressed| Length = 3914 Score = 31.8 bits (63), Expect = 9.1 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / +3 Query: 1 GRRLGNSLRPRRGVLRPTPAASPGRRS 81 G+RLG +LRP P PAA+ RR+ Sbjct: 828 GKRLGPALRPAAAAAAPRPAATWARRT 908
>LOC_Os09g23750:12009.t02058:unspliced-genomic hypothetical protein| Length = 1277 Score = 31.8 bits (63), Expect = 9.1 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 / -2 Query: 204 TVVISSAHCGRCCCCLASRDSEAP 133 T+ +SA CCCC A+R S +P Sbjct: 1204 TLGAASAATALCCCCCATRSSSSP 1133
>LOC_Os06g06460:12006.t00531:unspliced-genomic histone H3, putative, expressed| Length = 1030 Score = 31.8 bits (63), Expect = 9.1 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 / +1 Query: 1 GRRLGNSLRPRRGVLRPTPAAS 66 GRR G+S RPRR RP P A+ Sbjct: 217 GRRRGSSWRPRRRASRPRPPAA 282
>LOC_Os02g49790:12002.t04563:unspliced-genomic ALMT1, putative, expressed| Length = 2488 Score = 31.8 bits (63), Expect = 9.1 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 / -1 Query: 744 GDPPPVPSMPVVKGSTDLRKLSGPSA 667 GDPPP PS +GS + +GPSA Sbjct: 160 GDPPPPPSGRSRRGSPSRTRAAGPSA 83
>LOC_Os01g14970:12001.t01351:unspliced-genomic expressed protein| Length = 1343 Score = 31.8 bits (63), Expect = 9.1 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 / +1 Query: 4 RRLGNSLRPRRGVLRPTPAASPGRRSLA 87 R G LR R G RPT AASPG+ +A Sbjct: 472 RGAGGRLRRRGGERRPTAAASPGQIGVA 555
>LOC_Os01g08470:12001.t00725:unspliced-genomic protein binding protein, putative, expressed| Length = 2275 Score = 31.8 bits (63), Expect = 9.1 Identities = 17/44 (38%), Positives = 18/44 (40%) Frame = +1 / +3 Query: 1 GRRLGNSLRPRRGVLRPTPAASPGRRSLAFLSFLDPATTELPSH 132 GRR +PRR P P A P RR A L P P H Sbjct: 408 GRRRRRRPQPRRHRRVPAPRARPARRPRAAPPQLQPLLRRAPGH 539
>LOC_Os01g65100:12001.t05876:unspliced-genomic POT family protein, expressed| Length = 2659 Score = 25.4 bits (49), Expect(3) = 9.1 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -2 / -1 Query: 107 GSRKERKARERRPGEAAG 54 G R R+ R RRP AAG Sbjct: 265 GGRGSRRPRRRRPRSAAG 212 Score = 23.5 bits (45), Expect(3) = 9.1 Identities = 7/19 (36%), Positives = 9/19 (47%) Frame = -1 / -2 Query: 771 CPQGWSFGSGDPPPVPSMP 715 C + W + PPP P P Sbjct: 2028 CRRPWRRRAASPPPAPRRP 1972 Score = 23.5 bits (45), Expect(3) = 9.1 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -2 / -1 Query: 416 WRKAQTSDLGSNCQRRLRR 360 WR+ +T+ +C RR RR Sbjct: 1153 WRERRTATWRCSCSRRRRR 1097
>LOC_Os08g11000:12008.t00982:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1959 Score = 30.9 bits (61), Expect(2) = 9.6 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 / -1 Query: 862 HLRMDILPCYLRSSLQCLLYHQLFRQSGI 776 H+ +D + C L L+C ++HQ+ R S I Sbjct: 1905 HISLDEIICSLSQLLECSIWHQINRSSTI 1819 Score = 22.1 bits (42), Expect(2) = 9.6 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 / -1 Query: 509 QPMHLPFLSYFLALPVFH 456 QPM FL++F LPV H Sbjct: 1494 QPMIDFFLNFFKLLPVPH 1441 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 421,604,086 Number of extensions: 6518512 Number of successful extensions: 39680 Number of sequences better than 10.0: 55 Length of query: 364 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 314 Effective length of database: 52,799,986 Effective search space: 16579195604 Effective search space used: 16579195604 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
