ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6a02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828743.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN018A16, full insert sequence Length = 1053 Score = 523 bits (264), Expect = e-145 Identities = 514/596 (86%), Gaps = 6/596 (1%) Strand = Plus / Plus Query: 123 cccatcccatgggggcttccgaatctctactggccag---gcagcagcagcagcgaccgc 179 |||||| ||||||||||||||| ||| | || |||| ||||||||||| ||| |||| Sbjct: 133 cccatcacatgggggcttccgagtctatcctctccaggccgcagcagcagcggcggccgc 192 Query: 180 agtgggcggacgagatcacgacggtgtccgacggccggcgcgacgccgtggacgaagacc 239 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 193 cgtgggcggacgagatcacgacggtgtccgagggccggcgcgacgccggggacggagacc 252 Query: 240 ctctcctccgccgcatccggtcacttaccatcgccccgccgctgttgagcagtcagccag 299 | ||||||| ||||||| ||| || |||||||||||||||||||||||| | ||| | | Sbjct: 253 ccctcctccaccgcatcaagtccctcaccatcgccccgccgctgttgagcggccagtcgg 312 Query: 300 cggcgggctcggagacggagaccagcttcactgacatccttgtccggaaaccctccggat 359 ||||| |||||||| |||||| |||| |||| |||||||| |||||||| || ||| | Sbjct: 313 cggcgagctcggaggcggagagcagcctcaccgacatcctcgtccggaagccatcc---t 369 Query: 360 cctcctcagccgcctctggcaatttgagcccaaatctgatgtttgagcttttcgccatgt 419 ||||||| ||| |||||||||| |||| |||||| ||||||| ||||||||| | ||| Sbjct: 370 cctcctccgccacctctggcaacttgaatccaaatgtgatgttcgagcttttctctctgt 429 Query: 420 accgtgaatggcaagaagagatggccaaggaaatcagtggaagacagggagagctagaaa 479 ||||||||||||||||||||| ||||||| |||| |||| || ||||| |||| |||||| Sbjct: 430 accgtgaatggcaagaagagaaggccaagaaaattagtgaaacacaggaagagatagaaa 489 Query: 480 ataagatagaaacggcagatgcattggctgttaaacttctccagcggttcaattactccg 539 | ||||||||||| |||||||| ||| | |||| |||||||||||||||||||| || | Sbjct: 490 acaagatagaaacagcagatgctttgtccattaagcttctccagcggttcaattattctg 549 Query: 540 ttacttcgatgagatcaacctctcacaatcttgctgaagttcatccgctgcaggtggaag 599 ||||||| |||||||||||||||||||| ||||||||||| | ||| ||||||||||||| Sbjct: 550 ttacttccatgagatcaacctctcacaaccttgctgaagtccgtccactgcaggtggaag 609 Query: 600 ttggtgaattgaagggcaggttaactgaagtaataagtaattgcgacgcactgtgcaaga 659 ||||||| ||||||||||||||||| |||||||||||||| || || ||| ||||||||| Sbjct: 610 ttggtgagttgaagggcaggttaaccgaagtaataagtaactgtgatgcattgtgcaaga 669 Query: 660 ggattactgcagaagggccagaaagtttgcgaaggtctgttgaacctttcaccact 715 | ||| | || ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 670 gaattgccgctgaaggtccagaaagtctgcgatcgtctgttcaacctttcaccact 725
>ref|NM_001057675.1| Oryza sativa (japonica cultivar-group) Os03g0727100 (Os03g0727100) mRNA, complete cds Length = 1097 Score = 523 bits (264), Expect = e-145 Identities = 514/596 (86%), Gaps = 6/596 (1%) Strand = Plus / Plus Query: 123 cccatcccatgggggcttccgaatctctactggccag---gcagcagcagcagcgaccgc 179 |||||| ||||||||||||||| ||| | || |||| ||||||||||| ||| |||| Sbjct: 123 cccatcacatgggggcttccgagtctatcctctccaggccgcagcagcagcggcggccgc 182 Query: 180 agtgggcggacgagatcacgacggtgtccgacggccggcgcgacgccgtggacgaagacc 239 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 183 cgtgggcggacgagatcacgacggtgtccgagggccggcgcgacgccggggacggagacc 242 Query: 240 ctctcctccgccgcatccggtcacttaccatcgccccgccgctgttgagcagtcagccag 299 | ||||||| ||||||| ||| || |||||||||||||||||||||||| | ||| | | Sbjct: 243 ccctcctccaccgcatcaagtccctcaccatcgccccgccgctgttgagcggccagtcgg 302 Query: 300 cggcgggctcggagacggagaccagcttcactgacatccttgtccggaaaccctccggat 359 ||||| |||||||| |||||| |||| |||| |||||||| |||||||| || ||| | Sbjct: 303 cggcgagctcggaggcggagagcagcctcaccgacatcctcgtccggaagccatcc---t 359 Query: 360 cctcctcagccgcctctggcaatttgagcccaaatctgatgtttgagcttttcgccatgt 419 ||||||| ||| |||||||||| |||| |||||| ||||||| ||||||||| | ||| Sbjct: 360 cctcctccgccacctctggcaacttgaatccaaatgtgatgttcgagcttttctctctgt 419 Query: 420 accgtgaatggcaagaagagatggccaaggaaatcagtggaagacagggagagctagaaa 479 ||||||||||||||||||||| ||||||| |||| |||| || ||||| |||| |||||| Sbjct: 420 accgtgaatggcaagaagagaaggccaagaaaattagtgaaacacaggaagagatagaaa 479 Query: 480 ataagatagaaacggcagatgcattggctgttaaacttctccagcggttcaattactccg 539 | ||||||||||| |||||||| ||| | |||| |||||||||||||||||||| || | Sbjct: 480 acaagatagaaacagcagatgctttgtccattaagcttctccagcggttcaattattctg 539 Query: 540 ttacttcgatgagatcaacctctcacaatcttgctgaagttcatccgctgcaggtggaag 599 ||||||| |||||||||||||||||||| ||||||||||| | ||| ||||||||||||| Sbjct: 540 ttacttccatgagatcaacctctcacaaccttgctgaagtccgtccactgcaggtggaag 599 Query: 600 ttggtgaattgaagggcaggttaactgaagtaataagtaattgcgacgcactgtgcaaga 659 ||||||| ||||||||||||||||| |||||||||||||| || || ||| ||||||||| Sbjct: 600 ttggtgagttgaagggcaggttaaccgaagtaataagtaactgtgatgcattgtgcaaga 659 Query: 660 ggattactgcagaagggccagaaagtttgcgaaggtctgttgaacctttcaccact 715 | ||| | || ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 660 gaattgccgctgaaggtccagaaagtctgcgatcgtctgttcaacctttcaccact 715
>dbj|AK068587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153F04, full insert sequence Length = 1098 Score = 523 bits (264), Expect = e-145 Identities = 514/596 (86%), Gaps = 6/596 (1%) Strand = Plus / Plus Query: 123 cccatcccatgggggcttccgaatctctactggccag---gcagcagcagcagcgaccgc 179 |||||| ||||||||||||||| ||| | || |||| ||||||||||| ||| |||| Sbjct: 124 cccatcacatgggggcttccgagtctatcctctccaggccgcagcagcagcggcggccgc 183 Query: 180 agtgggcggacgagatcacgacggtgtccgacggccggcgcgacgccgtggacgaagacc 239 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 184 cgtgggcggacgagatcacgacggtgtccgagggccggcgcgacgccggggacggagacc 243 Query: 240 ctctcctccgccgcatccggtcacttaccatcgccccgccgctgttgagcagtcagccag 299 | ||||||| ||||||| ||| || |||||||||||||||||||||||| | ||| | | Sbjct: 244 ccctcctccaccgcatcaagtccctcaccatcgccccgccgctgttgagcggccagtcgg 303 Query: 300 cggcgggctcggagacggagaccagcttcactgacatccttgtccggaaaccctccggat 359 ||||| |||||||| |||||| |||| |||| |||||||| |||||||| || ||| | Sbjct: 304 cggcgagctcggaggcggagagcagcctcaccgacatcctcgtccggaagccatcc---t 360 Query: 360 cctcctcagccgcctctggcaatttgagcccaaatctgatgtttgagcttttcgccatgt 419 ||||||| ||| |||||||||| |||| |||||| ||||||| ||||||||| | ||| Sbjct: 361 cctcctccgccacctctggcaacttgaatccaaatgtgatgttcgagcttttctctctgt 420 Query: 420 accgtgaatggcaagaagagatggccaaggaaatcagtggaagacagggagagctagaaa 479 ||||||||||||||||||||| ||||||| |||| |||| || ||||| |||| |||||| Sbjct: 421 accgtgaatggcaagaagagaaggccaagaaaattagtgaaacacaggaagagatagaaa 480 Query: 480 ataagatagaaacggcagatgcattggctgttaaacttctccagcggttcaattactccg 539 | ||||||||||| |||||||| ||| | |||| |||||||||||||||||||| || | Sbjct: 481 acaagatagaaacagcagatgctttgtccattaagcttctccagcggttcaattattctg 540 Query: 540 ttacttcgatgagatcaacctctcacaatcttgctgaagttcatccgctgcaggtggaag 599 ||||||| |||||||||||||||||||| ||||||||||| | ||| ||||||||||||| Sbjct: 541 ttacttccatgagatcaacctctcacaaccttgctgaagtccgtccactgcaggtggaag 600 Query: 600 ttggtgaattgaagggcaggttaactgaagtaataagtaattgcgacgcactgtgcaaga 659 ||||||| ||||||||||||||||| |||||||||||||| || || ||| ||||||||| Sbjct: 601 ttggtgagttgaagggcaggttaaccgaagtaataagtaactgtgatgcattgtgcaaga 660 Query: 660 ggattactgcagaagggccagaaagtttgcgaaggtctgttgaacctttcaccact 715 | ||| | || ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 661 gaattgccgctgaaggtccagaaagtctgcgatcgtctgttcaacctttcaccact 716
>dbj|AK100159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L08, full insert sequence Length = 1783 Score = 295 bits (149), Expect = 2e-76 Identities = 289/335 (86%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 272 gccccgccgctgttgagcagtcagccagcggcgggctcggagacggagaccagcttcact 331 |||||||||||||||||| | ||| | |||||| |||||||| |||||| |||| |||| Sbjct: 37 gccccgccgctgttgagcggccagtcggcggcgagctcggaggcggagagcagcctcacc 96 Query: 332 gacatccttgtccggaaaccctccggatcctcctcagccgcctctggcaatttgagccca 391 |||||||| |||||||| || ||| |||||||| ||| |||||||||| |||| ||| Sbjct: 97 gacatcctcgtccggaagccatcc---tcctcctccgccacctctggcaacttgaatcca 153 Query: 392 aatctgatgtttgagcttttcgccatgtaccgtgaatggcaagaagagatggccaaggaa 451 ||| ||||||| ||||||||| | |||||||||||||||||||||||| ||||||| || Sbjct: 154 aatgtgatgttcgagcttttctctctgtaccgtgaatggcaagaagagaaggccaagaaa 213 Query: 452 atcagtggaagacagggagagctagaaaataagatagaaacggcagatgcattggctgtt 511 || |||| || ||||| |||| ||||||| ||||||||||| |||||||| ||| | || Sbjct: 214 attagtgaaacacaggaagagatagaaaacaagatagaaacagcagatgctttgtccatt 273 Query: 512 aaacttctccagcggttcaattactccgttacttcgatgagatcaacctctcacaatctt 571 || |||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| Sbjct: 274 aagcttctccagcggttcaattattctgttacttccatgagatcaacctctcacaacctt 333 Query: 572 gctgaagttcatccgctgcaggtggaagttggtga 606 |||||||| | ||| |||||||||||||||||||| Sbjct: 334 gctgaagtccgtccactgcaggtggaagttggtga 368
>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete sequence Length = 139788 Score = 137 bits (69), Expect = 9e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 587 ctgcaggtggaagttggtgaattgaagggcaggttaactgaagtaataagtaattgcgac 646 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || || Sbjct: 23422 ctgcaggtggaagttggtgagttgaagggcaggttaaccgaagtaataagtaactgtgat 23363 Query: 647 gcactgtgcaagaggattactgcagaagggccagaaagtttgcgaaggtctgttgaacct 706 ||| |||||||||| ||| | || ||||| ||||||||| ||||| ||||||| ||||| Sbjct: 23362 gcattgtgcaagagaattgccgctgaaggtccagaaagtctgcgatcgtctgttcaacct 23303 Query: 707 ttcaccact 715 ||||||||| Sbjct: 23302 ttcaccact 23294 Score = 133 bits (67), Expect = 1e-27 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 123 cccatcccatgggggcttccgaatctctactggccaggcagcagcagca---gcgaccgc 179 |||||| ||||||||||||||| ||| | || |||||| ||||||||| ||| |||| Sbjct: 25291 cccatcacatgggggcttccgagtctatcctctccaggccgcagcagcagcggcggccgc 25232 Query: 180 agtgggcggacgagatcacgacggtgtccgacggccggcgcgacgccgtggacgaagacc 239 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 25231 cgtgggcggacgagatcacgacggtgtccgagggccggcgcgacgccggggacggagacc 25172 Query: 240 ctctcctccgccgcatc 256 | ||||||| ||||||| Sbjct: 25171 ccctcctccaccgcatc 25155 Score = 125 bits (63), Expect = 4e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 464 cagggagagctagaaaataagatagaaacggcagatgcattggctgttaaacttctccag 523 |||| |||| ||||||| ||||||||||| |||||||| ||| | |||| ||||||||| Sbjct: 23790 caggaagagatagaaaacaagatagaaacagcagatgctttgtccattaagcttctccag 23731 Query: 524 cggttcaattactccgttacttcgatgagatcaacctctcacaatcttgctgaag 578 ||||||||||| || |||||||| |||||||||||||||||||| |||||||||| Sbjct: 23730 cggttcaattattctgttacttccatgagatcaacctctcacaaccttgctgaag 23676 Score = 77.8 bits (39), Expect = 7e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 389 ccaaatctgatgtttgagcttttcgccatgtaccgtgaatggcaagaagagatggccaag 448 |||||| ||||||| ||||||||| | |||||||||||||||||||||||| ||||||| Sbjct: 24761 ccaaatgtgatgttcgagcttttctctctgtaccgtgaatggcaagaagagaaggccaag 24702 Query: 449 gaaatcagtggaagacagg 467 |||| |||| || ||||| Sbjct: 24701 aaaattagtgaaacacagg 24683 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Minus Query: 272 gccccgccgctgttgagcagtcagccagcggcgggctcggagacggagaccagcttcact 331 |||||||||||||||||| | ||| | |||||| |||||||| |||||| |||| |||| Sbjct: 25036 gccccgccgctgttgagcggccagtcggcggcgagctcggaggcggagagcagcctcacc 24977 Query: 332 gacatccttgtccggaa 348 |||||||| |||||||| Sbjct: 24976 gacatcctcgtccggaa 24960
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 137 bits (69), Expect = 9e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 587 ctgcaggtggaagttggtgaattgaagggcaggttaactgaagtaataagtaattgcgac 646 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| || || Sbjct: 29424000 ctgcaggtggaagttggtgagttgaagggcaggttaaccgaagtaataagtaactgtgat 29424059 Query: 647 gcactgtgcaagaggattactgcagaagggccagaaagtttgcgaaggtctgttgaacct 706 ||| |||||||||| ||| | || ||||| ||||||||| ||||| ||||||| ||||| Sbjct: 29424060 gcattgtgcaagagaattgccgctgaaggtccagaaagtctgcgatcgtctgttcaacct 29424119 Query: 707 ttcaccact 715 ||||||||| Sbjct: 29424120 ttcaccact 29424128 Score = 133 bits (67), Expect = 1e-27 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 123 cccatcccatgggggcttccgaatctctactggccag---gcagcagcagcagcgaccgc 179 |||||| ||||||||||||||| ||| | || |||| ||||||||||| ||| |||| Sbjct: 29422131 cccatcacatgggggcttccgagtctatcctctccaggccgcagcagcagcggcggccgc 29422190 Query: 180 agtgggcggacgagatcacgacggtgtccgacggccggcgcgacgccgtggacgaagacc 239 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 29422191 cgtgggcggacgagatcacgacggtgtccgagggccggcgcgacgccggggacggagacc 29422250 Query: 240 ctctcctccgccgcatc 256 | ||||||| ||||||| Sbjct: 29422251 ccctcctccaccgcatc 29422267 Score = 125 bits (63), Expect = 4e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 464 cagggagagctagaaaataagatagaaacggcagatgcattggctgttaaacttctccag 523 |||| |||| ||||||| ||||||||||| |||||||| ||| | |||| ||||||||| Sbjct: 29423632 caggaagagatagaaaacaagatagaaacagcagatgctttgtccattaagcttctccag 29423691 Query: 524 cggttcaattactccgttacttcgatgagatcaacctctcacaatcttgctgaag 578 ||||||||||| || |||||||| |||||||||||||||||||| |||||||||| Sbjct: 29423692 cggttcaattattctgttacttccatgagatcaacctctcacaaccttgctgaag 29423746 Score = 77.8 bits (39), Expect = 7e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 389 ccaaatctgatgtttgagcttttcgccatgtaccgtgaatggcaagaagagatggccaag 448 |||||| ||||||| ||||||||| | |||||||||||||||||||||||| ||||||| Sbjct: 29422661 ccaaatgtgatgttcgagcttttctctctgtaccgtgaatggcaagaagagaaggccaag 29422720 Query: 449 gaaatcagtggaagacagg 467 |||| |||| || ||||| Sbjct: 29422721 aaaattagtgaaacacagg 29422739 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 272 gccccgccgctgttgagcagtcagccagcggcgggctcggagacggagaccagcttcact 331 |||||||||||||||||| | ||| | |||||| |||||||| |||||| |||| |||| Sbjct: 29422386 gccccgccgctgttgagcggccagtcggcggcgagctcggaggcggagagcagcctcacc 29422445 Query: 332 gacatccttgtccggaa 348 |||||||| |||||||| Sbjct: 29422446 gacatcctcgtccggaa 29422462
>ref|XM_001209620.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_06934) mRNA, complete cds Length = 873 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 ggcagcagcagcagcgaccgcag 181 ||||||||||||||||||||||| Sbjct: 599 ggcagcagcagcagcgaccgcag 577
>gb|L78816.1|MSGB26CS Mycobacterium leprae cosmid B26 DNA sequence Length = 37040 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 acggccggcgcgacgccgtgga 231 |||||||||||||||||||||| Sbjct: 5439 acggccggcgcgacgccgtgga 5418
>emb|AL583926.1|MLEPRTN10 Mycobacterium leprae strain TN complete genome; segment 10/10 Length = 269203 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 acggccggcgcgacgccgtgga 231 |||||||||||||||||||||| Sbjct: 163257 acggccggcgcgacgccgtgga 163236
>gb|DQ792970.1| Eleusine indica fruitful-like MADS-box transcription factor (FUL2) mRNA, partial cds Length = 1009 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 tggccaggcagcagcagcagc 173 ||||||||||||||||||||| Sbjct: 431 tggccaggcagcagcagcagc 451
>gb|AC189225.1| Brassica rapa subsp. pekinensis clone KBrB011P07, complete sequence Length = 169203 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 403 tgagcttttcgccatgtaccgtgaatggcaaga 435 |||||| ||| |||| ||||||||||||||||| Sbjct: 58672 tgagctcttctccatttaccgtgaatggcaaga 58704
>gb|DQ665652.1| Ranid herpesvirus 2 strain ATCC VR-568, complete genome Length = 231801 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 tggccaggcagcagcagcagc 173 ||||||||||||||||||||| Sbjct: 127813 tggccaggcagcagcagcagc 127833
>gb|AC152828.1| Ornithorhynchus anatinus chromosome UNK clone OABb-462A1, complete sequence Length = 146407 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 798 tggtgatataaaaggcattgc 818 ||||||||||||||||||||| Sbjct: 59641 tggtgatataaaaggcattgc 59661
>gb|AC138715.3| Mus musculus BAC clone RP23-283E23 from chromosome 15, complete sequence Length = 164806 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 agacagggagagctagaaaataaga 485 ||||| ||||||||||||||||||| Sbjct: 141979 agacaaggagagctagaaaataaga 141955
>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence Length = 262970 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 960 tttctttgtgcgtaggtgtgtggtg 984 |||||||||| |||||||||||||| Sbjct: 55382 tttctttgtgtgtaggtgtgtggtg 55406
>gb|AC024908.22| Homo sapiens 10 BAC RP11-446F3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158349 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 cacaatcttgctgaagttcat 583 ||||||||||||||||||||| Sbjct: 74968 cacaatcttgctgaagttcat 74988
>emb|AL359740.24| Human DNA sequence from clone RP13-204A15 on chromosome X Contains a Np95-like ring finger protein (NIRF) pseudogene, a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide pseudogene, a makorin ring finger protein, 1 (MKRN1) pseudogene and two CpG islands, complete sequence Length = 98104 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 ggcagcagcagcagcgaccgcagtg 183 |||||||||||||||||| |||||| Sbjct: 90916 ggcagcagcagcagcgacggcagtg 90892
>dbj|AK197487.1| Mus musculus cDNA, clone:Y1G0125E05, strand:unspecified Length = 375 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1042 tacctctttttcaagcagatt 1062 ||||||||||||||||||||| Sbjct: 33 tacctctttttcaagcagatt 13
>gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, complete sequence Length = 186137 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 461 agacagggagagctagaaaataaga 485 ||||| ||||||||||||||||||| Sbjct: 147861 agacaaggagagctagaaaataaga 147885
>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence Length = 255342 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 actggccaggcagcagcagcagcga 175 ||||||||||||| ||||||||||| Sbjct: 134373 actggccaggcaggagcagcagcga 134397 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 177,003,696 Number of extensions: 9595566 Number of successful extensions: 357175 Number of sequences better than 10.0: 20 Number of HSP's gapped: 357171 Number of HSP's successfully gapped: 28 Length of query: 1092 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1069 Effective length of database: 18,503,978,556 Effective search space: 19780753076364 Effective search space used: 19780753076364 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
