| Clone Name | FLbaf5m16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q9CCR5:PYRB_MYCLE Aspartate carbamoyltransferase - Mycobacterium... | 34 | 0.66 | 2 | Q8ZZC7:PYRC_PYRAE Dihydroorotase - Pyrobaculum aerophilum | 30 | 7.3 | 3 | P53258:GYP2_YEAST GTPase-activating protein GYP2 - Saccharomyces... | 30 | 7.3 |
|---|
>Q9CCR5:PYRB_MYCLE Aspartate carbamoyltransferase - Mycobacterium leprae| Length = 321 Score = 33.9 bits (76), Expect = 0.66 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = +2 Query: 212 VDGYYLSIEVSADLVLPRAKTVRQLRKRAQVLKGGSFGS--GTTIVYSLTEAEKLLL 376 VDG+ ++ D LP A V LR +A+ + GG F S + +Y LTE + LL Sbjct: 204 VDGWPATVSCDFDAELPAADAVLMLRVQAERMNGGFFPSVREYSCLYGLTERRQALL 260
>Q8ZZC7:PYRC_PYRAE Dihydroorotase - Pyrobaculum aerophilum| Length = 383 Score = 30.4 bits (67), Expect = 7.3 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = -3 Query: 295 PFAQLAYSLRTGQNKISTHFD*KVVAINKFHLFNRHTAAALAGWSIVPDGPSHCLMRSHP 116 P A+LA RT Q T V I+ H+ TA A GW+ V P H L+ Sbjct: 173 PIAELACVERTRQMAFKTG-----VKIHLTHITLSQTAEAARGWATVDATPHHLLLDVEN 227 Query: 115 C 113 C Sbjct: 228 C 228
>P53258:GYP2_YEAST GTPase-activating protein GYP2 - Saccharomyces cerevisiae (Baker's| yeast) Length = 950 Score = 30.4 bits (67), Expect = 7.3 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = +2 Query: 620 GNANMGFEEFLQFLYVWYPSTR-CDLNHFALW*KKKKN 730 G++NMGFE F+QFL + S R C+ + + K+K+N Sbjct: 568 GSSNMGFEVFIQFLSKFCDSCRPCEKDKDPAFRKQKRN 605 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 125,232,263 Number of extensions: 2740556 Number of successful extensions: 6040 Number of sequences better than 10.0: 3 Number of HSP's gapped: 6039 Number of HSP's successfully gapped: 3 Length of query: 244 Length of database: 100,686,439 Length adjustment: 110 Effective length of query: 134 Effective length of database: 70,513,989 Effective search space: 9448874526 Effective search space used: 9448874526 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)