ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf3e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0450600:Os04g0450600 80 2e-15
2Os06g0257500:Os06g0257500 30 3.6
3AK105141:Os04g0295000 28 8.1

>Os04g0450600:Os04g0450600 |
          Length = 217
 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
 Frame = +1

Query: 97  MAILMSCVTSKMLAPCIPVVSRQQRDTCISVSAHRRQIRI-GLAMKSWGTSCTVPPMRIR 273
           MA+L S V  K LA C P ++++ R+T +S SAHRRQI I GL M S G +  +P   +R
Sbjct: 1   MAVLKSLVACKGLALCAPAIAQRHRNTPLSASAHRRQILITGLTMNSSGINSALP---VR 57

Query: 274 GTTRIAAVGSDSGELREEKSPLPNKAAAISSDPG*LPGKSSASNKSSL-XXXXXXXXXXX 450
           G  +I AVGS          P+P+  +   +    +   S     + +            
Sbjct: 58  GAAQIPAVGSGPPAPSGGNLPVPSMPSCFFNVISSISISSCIPTYAPVRAKWVVGAIIVA 117

Query: 451 XSFYGQMRAMEENVXXXXXXXXXXXXXXXDVVDKLADEVI-AFPGNENLXXXXXXXXXXX 627
              Y ++RA+E+ V               +  +K+A E+  AFPGNENL           
Sbjct: 118 IPIYRKIRALEDTVEKTAEVAIEVVDTVAEATEKVAGELADAFPGNENLKEVASKIKTVA 177

Query: 628 XXXXXXXXXXXXXXHKVEEIEKEVDAAVDTLMGK 729
                          KV+EI+KE+DA VD ++ K
Sbjct: 178 DVIEDDAEKAEALIQKVDEIKKELDAIVDPIIDK 211



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>Os06g0257500:Os06g0257500 |
          Length = 352

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 383 GNYPGSELIAAALLGNGDFSSRNSPESEPTAAIRVVPLIRIGGTVQLV 240
           G+ PG E++    +G G+       E       R VP+ R+GG V L+
Sbjct: 222 GHEPGGEVLEHDAVGGGEEGEHVGDEVALVGGQRGVPVARVGGEVHLL 269



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>AK105141:Os04g0295000 |
          Length = 118

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 693 GGGCCSGYFDGEGH 734
           GGGCCS   DG GH
Sbjct: 105 GGGCCSSSSDGHGH 118


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,115,555
Number of extensions: 677037
Number of successful extensions: 1803
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1802
Number of HSP's successfully gapped: 4
Length of query: 344
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 243
Effective length of database: 11,355,714
Effective search space: 2759438502
Effective search space used: 2759438502
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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