ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3e02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g37760:12004.t03346:unspliced-genomic expressed protein| Length = 2493 Score = 41.4 bits (84), Expect(3) = 2e-10 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -1 / -3 Query: 678 NLVD*GLGFLCIFLYLFCDGFDPEGCLLKVFITGK 574 NL+D*GLGFL I LY G + G LL++F+ GK Sbjct: 1009 NLLD*GLGFLGIILYHIGYGLNLGGNLLEIFVAGK 905 Score = 40.5 bits (82), Expect(3) = 2e-10 Identities = 20/42 (47%), Positives = 21/42 (50%) Frame = -1 / -3 Query: 216 DSDLPTMS*YRNTCVPLLPRNHWDAWRQHFGCNT*HEDRHDI 91 D DLP MS R VP+ N W A RQ F N E RH I Sbjct: 250 DQDLPAMSRCR*RRVPVTLSNRWSAQRQAFASNKRFEHRHGI 125 Score = 28.6 bits (56), Expect(3) = 2e-10 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 555 EFVNHIRRFLDSLNCYLCRLLHILFHCSH 469 + ++ +R +D L+CYL LLH ++ H Sbjct: 883 DLLSRLRHRVDHLDCYLRCLLHGVYRIEH 797 Score = 50.1 bits (103), Expect(3) = 3e-07 Identities = 22/42 (52%), Positives = 29/42 (69%) Frame = +1 / +2 Query: 91 NIMAILMSCVTSKMLAPCIPVVSRQQRDTCISVSAHRRQIRI 216 N MA+L S V K LA C P ++++ R+T +S SAHRRQI I Sbjct: 125 NPMAVLKSLVACKGLALCAPAIAQRHRNTPLSASAHRRQILI 250 Score = 26.3 bits (51), Expect(3) = 3e-07 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = +3 / +2 Query: 285 NCCSWFRFWRIARRKIPITQ 344 N CSWF RRK P TQ Sbjct: 467 NPCSWFWSSSTVRRKSPSTQ 526 Score = 23.1 bits (44), Expect(3) = 3e-07 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +1 / +2 Query: 571 AFPGNENL 594 AFPGNENL Sbjct: 902 AFPGNENL 925 Score = 46.0 bits (94), Expect = 4e-04 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +3 / +1 Query: 90 KYHGDPHVMCYIQNVGAMHPSGFSATTGHMYFCISSSSANPNRLSHEVL 236 K HG + C +Q +GA+ S SA+ H CI SS ANP+ ++ L Sbjct: 124 KSHGGAQISCCLQRLGAVRSSDCSASPEHAVICIGSSPANPDHRLNDEL 270 Score = 36.8 bits (74), Expect(2) = 0.001 Identities = 20/42 (47%), Positives = 22/42 (52%) Frame = -2 / -1 Query: 215 IRICRR*ADTEIHVSRCCRETTGMHGANILDVTHDMRIAMIF 90 IRICRR*AD + V R G H A L T D+ AM F Sbjct: 249 IRICRR*ADADNGVFR*R*AIAGAHSAKPLQATRDLSTAMGF 124 Score = 30.4 bits (60), Expect(2) = 0.001 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = -2 / -1 Query: 671 WIRXXXXXXXXXXXXXXALILKAAFLRFSLPGNA 570 WIR LIL+A LRFSLPG A Sbjct: 1002 WIRASAFSASSSITSATVLILEATSLRFSLPGKA 901 Score = 40.5 bits (82), Expect = 0.020 Identities = 20/43 (46%), Positives = 25/43 (58%) Frame = +2 / +3 Query: 83 SL*ISWRSSCHVLHPKCWRHASQWFLGNNGTHVFLYQLIVGKS 211 +L I WR S +L K WR A Q L GT +L++LI GKS Sbjct: 117 TLQIPWRCSNLLLLAKAWRCALQRLLSVTGTRRYLHRLIAGKS 245
>LOC_Os10g37690:12010.t03029:unspliced-genomic inner membrane protein OXA1, mitochondrial precursor, putative,| expressed Length = 4941 Score = 39.6 bits (80), Expect = 0.038 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -1 / -1 Query: 519 LNCYLCRLLHILFHCSHLSIKRYCSKDATNDHRDQ*RFVGC*GFSW 382 LNCY+C +L H S K Y K H +Q F C F+W Sbjct: 777 LNCYVCICKALLLHTVKTSSKHYGYKHVAESH*EQLTFSFCVAFNW 640
>LOC_Os05g46560:12005.t04142:unspliced-genomic ran GTPase activating protein, putative, expressed| Length = 2993 Score = 36.8 bits (74), Expect = 0.26 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -1 / +3 Query: 786 SNCYFYLLPRSSVLSFLHALPHQSIHCSIHLLFYLFN 676 S+CY+ L R+SV S H L + CS L+FY N Sbjct: 624 SHCYYVLADRTSVASMQHCLHYSI*ICSYCLIFYYSN 734
>LOC_Os04g28320:12004.t02530:unspliced-genomic hypothetical protein| Length = 204 Score = 27.2 bits (53), Expect(2) = 0.48 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +3 / +2 Query: 426 GRWWRLWSS 452 GRWWR WS+ Sbjct: 140 GRWWRCWSA 166 Score = 25.8 bits (50), Expect(2) = 0.48 Identities = 9/27 (33%), Positives = 12/27 (44%) Frame = +2 / +2 Query: 92 ISWRSSCHVLHPKCWRHASQWFLGNNG 172 + W C + P CWR LG +G Sbjct: 32 LCWWWCCCCMSPACWRRRRGRCLGRSG 112
>LOC_Os09g09960:12009.t00788:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 35.0 bits (70), Expect = 0.92 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 / -1 Query: 50 GIASTLKKLADSL*ISWRSSCHVLHPKCWRHASQW 154 G+AS++ K + +R+SC HP WR ASQ+ Sbjct: 2988 GLASSIAKNPRPTMLRFRASCMSTHPNPWREASQY 2884
>LOC_Os06g19800:12006.t01798:unspliced-genomic BURP domain containing protein, expressed| Length = 8872 Score = 33.1 bits (66), Expect(2) = 0.92 Identities = 12/45 (26%), Positives = 24/45 (53%) Frame = -1 / +2 Query: 813 YIYLLTSTISNCYFYLLPRSSVLSFLHALPHQSIHCSIHLLFYLF 679 YIY+ T T + Y Y + + ++++ + IH IH+ Y++ Sbjct: 3362 YIYIYTYTYTYTYTYTYTYTYIYTYIYIYIYIHIHIHIHIHIYIY 3496 Score = 25.4 bits (49), Expect(2) = 0.92 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = -1 / +1 Query: 1026 FFLVRQHKINLYLYIYNY 973 + + Q K N+Y+Y+Y Y Sbjct: 3043 YIYITQEKKNIYIYVYVY 3096
>LOC_Os10g42320:12010.t03460:unspliced-genomic nonsense-mediated mRNA decay protein 3, putative, expressed| Length = 2498 Score = 34.5 bits (69), Expect = 1.3 Identities = 17/59 (28%), Positives = 25/59 (42%) Frame = +3 / -1 Query: 72 S*LTPCKYHGDPHVMCYIQNVGAMHPSGFSATTGHMYFCISSSSANPNRLSHEVLGHQL 248 S*L PC +H H + Q G +G + +C S S P R H+ G ++ Sbjct: 1322 S*LCPCHHHSSWHHKDHTQGQGLQDSAGGQDESAR*TWCRFSQSRRPGRPGHKPTGSEI 1146
>LOC_Os03g50160:12003.t04360:unspliced-genomic chemocyanin precursor, putative, expressed| Length = 1891 Score = 34.5 bits (69), Expect = 1.3 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = +3 / +3 Query: 204 ANPNRLSHEVLGHQLYRSADADKRNDTNCCSWFRFWRIAR 323 A P SH + H L+ A+ + NCC +WR R Sbjct: 3 ALPPLASHSLAQHYLHPLAEISSKRSVNCCKAISYWRWLR 122
>LOC_Os09g36090:12009.t03086:unspliced-genomic plus-3 domain containing protein, expressed| Length = 8475 Score = 29.9 bits (59), Expect(3) = 1.4 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 / -1 Query: 378 ITRKILSIQQIFIGHGGRWWRLWSSIFLWT 467 I+ I+ + I I H WW+LW F+ T Sbjct: 2946 ISIMIIGVYNIDIAHRRCWWKLWKCHFVKT 2857 Score = 24.9 bits (48), Expect(3) = 1.4 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 / -3 Query: 882 HCLLVSTFYVRKYGRHKHSF 941 H L+V +FYV + H H F Sbjct: 2479 HVLIVISFYVHQLYLHLHEF 2420 Score = 23.5 bits (45), Expect(3) = 1.4 Identities = 6/16 (37%), Positives = 11/16 (68%) Frame = +3 / -3 Query: 963 CMKSSYICTNRDLFCV 1010 C+ +++ NRD FC+ Sbjct: 2197 CLTEAFVSPNRDEFCL 2150
>LOC_Os12g41040:12012.t03781:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 11286 Score = 27.2 bits (53), Expect(2) = 1.6 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -1 / -2 Query: 969 SCMFQYSHSRNYAC 928 SC F SHSR++AC Sbjct: 5282 SCSFARSHSRSFAC 5241 Score = 24.0 bits (46), Expect(2) = 1.6 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 / -3 Query: 1002 INLYLYIYNYFSCMF 958 I +Y+YIY YF+ F Sbjct: 5365 IYIYIYIYIYFTLTF 5321
>LOC_Os05g16580:12005.t01428:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4128 Score = 34.1 bits (68), Expect = 1.7 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = -1 / +3 Query: 1032 FFFFLVRQHKINLYLYIYNYFSCMF 958 + + + H N+Y+YIY Y CM+ Sbjct: 2280 YIYIYIYMHLYNIYIYIYTYILCMY 2354
>LOC_Os03g61990:12003.t05427:unspliced-genomic glycine-rich RNA-binding protein 8, putative, expressed| Length = 3234 Score = 26.7 bits (52), Expect(2) = 1.8 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -2 / +3 Query: 791 LLVTVTFICYHVHLCYRFFMPFPI 720 LL + F+CY LCY +P + Sbjct: 2718 LLPCIVFLCYSDWLCYLVIVPLTL 2789 Score = 24.4 bits (47), Expect(2) = 1.8 Identities = 13/50 (26%), Positives = 21/50 (42%) Frame = -1 / +2 Query: 612 PEGCLLKVFITGKCYDFVCEFVNHIRRFLDSLNCYLCRLLHILFHCSHLS 463 P G V + G C+ + +H+ S CY+ +L + H S S Sbjct: 2792 PSGVAAVVLLLGLCHSLLLPCCDHV*AT*ISERCYVVAVLCHICH*SSCS 2941
>LOC_Os03g61980:12003.t05426:unspliced-genomic CYP707A3, putative, expressed| Length = 3181 Score = 26.7 bits (52), Expect(2) = 1.8 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -2 / -1 Query: 791 LLVTVTFICYHVHLCYRFFMPFPI 720 LL + F+CY LCY +P + Sbjct: 3145 LLPCIVFLCYSDWLCYLVIVPLTL 3074 Score = 24.4 bits (47), Expect(2) = 1.8 Identities = 13/50 (26%), Positives = 21/50 (42%) Frame = -1 / -3 Query: 612 PEGCLLKVFITGKCYDFVCEFVNHIRRFLDSLNCYLCRLLHILFHCSHLS 463 P G V + G C+ + +H+ S CY+ +L + H S S Sbjct: 3071 PSGVAAVVLLLGLCHSLLLPCCDHV*AT*ISERCYVVAVLCHICH*SSCS 2922
>LOC_Os02g15630:12002.t01356:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8178 Score = 29.0 bits (57), Expect(2) = 2.1 Identities = 11/45 (24%), Positives = 22/45 (48%) Frame = -1 / +1 Query: 813 YIYLLTSTISNCYFYLLPRSSVLSFLHALPHQSIHCSIHLLFYLF 679 YIY+ T T + Y+ + +++ + IH IH+ Y++ Sbjct: 3103 YIYIYTYTYTYIRIYIYTYIHIYVYIYIHTYIYIHTYIHIYIYIY 3237 Score = 28.1 bits (55), Expect(2) = 2.1 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -1 / +2 Query: 1014 RQHKINLYLYIYNY 973 R+ K+NLY+YIY Y Sbjct: 2900 RKIKVNLYIYIYTY 2941
>LOC_Os08g16880:12008.t01560:unspliced-genomic expressed protein| Length = 6076 Score = 32.2 bits (64), Expect(2) = 2.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 / +3 Query: 751 CAIVSSCPSPSKYPLQHPPPFLSLQPC 671 C I + CPS S P PPP + L+ C Sbjct: 93 CPITAVCPSSSTQPWPPPPPPIPLRRC 173 Score = 24.4 bits (47), Expect(2) = 2.2 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -1 / +1 Query: 510 YLCRLLHILFHCSHL 466 Y C ++L HCSH+ Sbjct: 538 YTCLESYLLLHCSHI 582
>LOC_Os12g42900:12012.t03963:unspliced-genomic anther-specific proline-rich protein APG, putative, expressed| Length = 1658 Score = 29.9 bits (59), Expect(2) = 2.2 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 860 SLHATIWLIIWCVDDHIFIC* 798 ++ +T WL++WC HI C* Sbjct: 1641 AISSTFWLLMWCFSIHICRC* 1579 Score = 24.9 bits (48), Expect(2) = 2.2 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = -3 / -2 Query: 727 SPSKYPLQHPPPFLSLQ 677 SPS P PPP L LQ Sbjct: 1393 SPSPSPAAAPPPLLPLQ 1343
>LOC_Os12g16340:12012.t01487:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6571 Score = 33.6 bits (67), Expect = 2.4 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -2 / +2 Query: 830 WCVDDHIFIC*LLLLVTVTFICYHVHLCYRFFMPFP 723 W + +H+ C LLLL + F CY+ +L F P P Sbjct: 3680 WLLWNHLLQCHLLLLRILKFSCYYENLSLFFRNPIP 3787
>LOC_Os06g14100:12006.t01285:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed| Length = 5750 Score = 33.6 bits (67), Expect = 2.4 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 / -2 Query: 1032 FFFFLVRQHKINLYLYIYNYFSCMFQYSH 946 FFF + H + +Y+YIY Y C++ + + Sbjct: 4000 FFFMALLLHGLYIYIYIYIYKPCIYMFQY 3914
>LOC_Os04g11750:12004.t00999:unspliced-genomic conserved hypothetical protein| Length = 2781 Score = 33.6 bits (67), Expect = 2.4 Identities = 18/71 (25%), Positives = 31/71 (43%) Frame = -1 / -2 Query: 888 NNGLKTGACKPTCNNLAYHLVRR*SYIYLLTSTISNCYFYLLPRSSVLSFLHALPHQSIH 709 NN + K + H+ + ++ LL + CYF+ L + + P S Sbjct: 2138 NNNNNASSSKGFLRVCSSHISVKHVFMVLLHMSYLLCYFFRLKYAEL*LDFQQSPSLSPF 1959 Query: 708 CSIHLLFYLFN 676 CS+H+LF +N Sbjct: 1958 CSLHILFAAYN 1926
>LOC_Os10g22510:12010.t01731:unspliced-genomic mla1, putative, expressed| Length = 4002 Score = 29.0 bits (57), Expect(2) = 2.7 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 / +1 Query: 798 TSTISNCYFYLLPRSSVLSFLHALP 724 T+ + NC + LLP S+L LH P Sbjct: 901 TTDMFNCCYCLLPNQSLLCVLHPTP 975 Score = 26.7 bits (52), Expect(2) = 2.7 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -1 / +3 Query: 513 CYLCRLLHILF 481 CYLC +LH++F Sbjct: 3666 CYLCSILHVVF 3698
>LOC_Os04g47870:12004.t04309:unspliced-genomic PINHEAD protein, putative, expressed| Length = 15105 Score = 28.1 bits (55), Expect(2) = 2.8 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 / -1 Query: 109 MSCVTSKMLAPCIPVVSRQQRDTCIS 186 +SCV ++PC+P R Q + C S Sbjct: 5277 LSCV*IGSVSPCVPYAPRDQPEPCRS 5200 Score = 22.1 bits (42), Expect(2) = 2.8 Identities = 7/21 (33%), Positives = 9/21 (42%) Frame = +1 / -3 Query: 187 VSAHRRQIRIGLAMKSWGTSC 249 + + R GLA WG C Sbjct: 5179 IQCRHQNPRAGLAEHGWGNGC 5117
>LOC_Os07g31110:12007.t02798:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 6134 Score = 26.7 bits (52), Expect(2) = 3.0 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -3 / +1 Query: 712 PLQHPPPFLSL 680 P HPPPFLSL Sbjct: 4168 PAPHPPPFLSL 4200 Score = 23.5 bits (45), Expect(2) = 3.0 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -1 / +3 Query: 807 YLLTSTISNCYFYLLPRSSVLSFLHALPHQS 715 YLL + F+ L SS +F H+ H S Sbjct: 3972 YLLEEEFFHFLFFYLLYSSTNAFTHSFIHHS 4064
>LOC_Os11g01190:12011.t00019:unspliced-genomic expressed protein| Length = 6829 Score = 33.1 bits (66), Expect = 3.3 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = +3 / +1 Query: 441 LWSSIFLWTDESNGRECGEDGRDSN*DYRESGGCG 545 L+ F W + +G ECG++ D + G CG Sbjct: 1045 LYLCFF*WKQDGSGEECGQETEDPKGQVKGRGNCG 1149
>LOC_Os01g46590:12001.t04107:unspliced-genomic expressed protein| Length = 4591 Score = 33.1 bits (66), Expect = 3.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 / +3 Query: 317 CEKKNPHYPTRRLQLVRTLGNYQENPQHPTNL 412 C+ KN HY T + L+ L E P HP NL Sbjct: 1413 CQLKNVHYLTYIMNLLTLLLKSLEQPAHPINL 1508
>LOC_Os09g04200:12009.t00316:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2456 Score = 33.1 bits (66), Expect = 3.3 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 / +1 Query: 999 NLYLYIYNYFSCMFQYSHSRNYACV 925 ++Y+YIY Y C++ Y + Y CV Sbjct: 1207 HIYIYIYAYILCIYMYCNICMYVCV 1281
>LOC_Os08g37874:12008.t03523:unspliced-genomic oxidoreductase, putative, expressed| Length = 8492 Score = 33.1 bits (66), Expect = 3.3 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 / -1 Query: 609 EGCLLKVFITGKCYDFVC 556 EGC KVF +G CY F+C Sbjct: 1991 EGCYKKVFCSGACYIFLC 1938
>LOC_Os05g49270:12005.t04360:unspliced-genomic solute carrier family 2, facilitated glucose transporter member 8,| putative, expressed Length = 4604 Score = 33.1 bits (66), Expect = 3.3 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 / +3 Query: 244 SCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSDPG*LPGKSSASN 405 S T PP R ++R A SDS + P+ + S P LP SS+S+ Sbjct: 339 SPTSPPSSARSSSRSAPSSSDSRGASPPRRRTPSSETSTSPSPRLLPASSSSSS 500
>LOC_Os03g12620:12003.t01061:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 4530 Score = 33.1 bits (66), Expect = 3.3 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = -1 / -1 Query: 819 *SYIYLLTSTISNCYFYLLPRSSVLSFLHALPHQSIHCSIHLLFYLFN 676 *+YIY+ Y Y+ + +++ H H HL+ YLFN Sbjct: 1170 *TYIYIYIYIYIYIYIYIYIYIYIYIYIYIYTHTHTHIHTHLISYLFN 1027
>LOC_Os10g28510:12010.t02202:unspliced-genomic expressed protein| Length = 7888 Score = 25.8 bits (50), Expect(2) = 4.0 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = -1 / -2 Query: 816 SYIYLLTSTISNCYFYLLPRSSVLSFLHALPHQSIHCSIHLLFYLFN 676 ++ YL + F+L + FL + ++ CS ++LF +FN Sbjct: 5646 NFSYL*IVFLVEILFFLF*FQILFYFLFRILTNNVLCSFNILFLIFN 5506 Score = 24.0 bits (46), Expect(2) = 4.0 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -1 / -1 Query: 696 LLFYLFNLVD*GLGFLCIFLYLFC 625 +LF++ NL +GFL + L+ +C Sbjct: 5440 ILFFIPNLN*SRIGFLYVLLFQYC 5369
>LOC_Os06g09870:12006.t00865:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 1107 Score = 25.4 bits (49), Expect(3) = 4.1 Identities = 6/11 (54%), Positives = 10/11 (90%) Frame = +3 / +3 Query: 432 WWRLWSSIFLW 464 W+R+WSS ++W Sbjct: 669 WFRIWSSWWIW 701 Score = 23.5 bits (45), Expect(3) = 4.1 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = +2 / +1 Query: 995 RFILCCLTK 1021 +F++CCLTK Sbjct: 1024 KFVICCLTK 1050 Score = 22.1 bits (42), Expect(3) = 4.1 Identities = 9/21 (42%), Positives = 9/21 (42%) Frame = +3 / +3 Query: 384 RKILSIQQIFIGHGGRWWRLW 446 R I SI RWWR W Sbjct: 567 RGIWSIWWRICSRRRRWWRWW 629
>LOC_Os05g10410:12005.t00876:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2917 Score = 25.4 bits (49), Expect(2) = 4.3 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -1 / -3 Query: 1032 FFFFLVRQHKINLYLYIY 979 FFF + H + +Y+YIY Sbjct: 2516 FFFMALLLHGLYIYIYIY 2463 Score = 24.4 bits (47), Expect(2) = 4.3 Identities = 6/17 (35%), Positives = 12/17 (70%) Frame = -1 / -2 Query: 996 LYLYIYNYFSCMFQYSH 946 +Y+YIY Y C++ + + Sbjct: 2484 IYIYIYIYKPCIYMFQY 2434
>LOC_Os08g20500:12008.t04361:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5206 Score = 25.4 bits (49), Expect(3) = 4.4 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = -1 / +1 Query: 1032 FFFFLVRQHKINLYLYIYNYFSCMFQY 952 F+ F + IN Y YI N+F Y Sbjct: 1762 FYTFRLAPSHINFYFYI*NHFPIELSY 1842 Score = 25.4 bits (49), Expect(3) = 4.4 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 / +3 Query: 525 DSLNCYLCRLLHILFHCSHLSIKRYCSKDATNDHRD 418 D + YL + + F CS +S+KR + TN+ D Sbjct: 4896 DGMEKYLFKYVAKGFDCSRVSLKRKRACAGTNEIHD 5003 Score = 24.4 bits (47), Expect(3) = 4.4 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = -3 / +1 Query: 745 IVSSCPSPSKYPLQHPPPFLSLQPC 671 + +C S SK HP P + Q C Sbjct: 2185 LTENCCSYSKSGFPHPDPITAAQSC 2259
>LOC_Os12g42130:12012.t03887:unspliced-genomic transparent testa 12 protein, putative, expressed| Length = 2553 Score = 32.7 bits (65), Expect = 4.5 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 / +2 Query: 341 PTRRLQLVRTLGNYQENPQHPTNLHWS 421 PT+RL L+R+L P P + HWS Sbjct: 1145 PTQRLHLIRSLSGMPPTPCLPHDTHWS 1225
>LOC_Os06g14620:12006.t01337:unspliced-genomic ribonucleoside-diphosphate reductase small chain, putative,| expressed Length = 1651 Score = 32.7 bits (65), Expect = 4.5 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -2 / -3 Query: 383 GNYPGSELIAAALLGNGDFSSRNSPESEPTAAIRVVPLIRIGGTVQLV 240 G+ PG E++ +G G+ E R VP+ R+GG V L+ Sbjct: 359 GHEPGGEVLEHDAVGGGEEGEHVGDEVALVGGQRGVPVARVGGEVHLL 216
>LOC_Os08g09380:12008.t00823:unspliced-genomic F-box domain containing protein, expressed| Length = 1497 Score = 32.7 bits (65), Expect = 4.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 / -1 Query: 780 CYFYLLPRSSVLSFLHALPHQSIHCS 703 C Y P+S L +H HQSI+CS Sbjct: 645 CSSYFCPKSQELVLMHLHKHQSIYCS 568
>LOC_Os05g48020:12005.t04236:unspliced-genomic syntaxin 72, putative, expressed| Length = 3567 Score = 32.7 bits (65), Expect = 4.5 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 / +1 Query: 987 YIYNYFSCMFQYSHSRNYAC 928 +I NY SC+F +SH+ AC Sbjct: 3082 HILNYISCIFSFSHTSEVAC 3141
>LOC_Os06g48920:12006.t04578:unspliced-genomic hypothetical protein| Length = 3067 Score = 26.3 bits (51), Expect(2) = 5.7 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -1 / +2 Query: 552 FVNHIRRFLDSLNCYLCRLLHILFHCSHLSIKRYC 448 F+ H L S+ +LC L I C+HL C Sbjct: 1895 FLCHFLFMLSSVYHFLCMLFSIDMSCTHLKYYICC 1999 Score = 23.1 bits (44), Expect(2) = 5.7 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 / +2 Query: 768 LLPRSSVLSFLHALPHQSIHCSIHLLFYLFNL 673 L+ R+S+ L H S+H S L +LF L Sbjct: 1826 LITRTSMFLKLLLAIHFSLHSSTFLCHFLFML 1921
>LOC_Os02g30100:12002.t02703:unspliced-genomic cytochrome P450 81E1, putative, expressed| Length = 2414 Score = 25.8 bits (50), Expect(2) = 5.8 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -1 / +1 Query: 999 NLYLYIYNYFSCMFQYS 949 ++Y+YIY + C FQ S Sbjct: 1750 SIYIYIYITYKCSFQVS 1800 Score = 23.5 bits (45), Expect(2) = 5.8 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = -1 / +2 Query: 1032 FFFFLVRQHKINLYLYIY 979 + + + + INLY+YIY Sbjct: 1715 YLYLKILKFDINLYIYIY 1768
>LOC_Os04g35490:12004.t03219:unspliced-genomic expressed protein| Length = 2072 Score = 24.9 bits (48), Expect(2) = 5.9 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 / -1 Query: 279 RSSYPHRRNGTAGAP 235 R+S RR GTAGAP Sbjct: 266 RASPSRRRRGTAGAP 222 Score = 24.4 bits (47), Expect(2) = 5.9 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -3 / -1 Query: 253 RYSWCPKTSWLSRFGFADDE 194 R W P++SW R A DE Sbjct: 104 RARWPPRSSWRERHAVALDE 45
>LOC_Os02g34430:12002.t03082:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor,| putative, expressed Length = 3202 Score = 24.9 bits (48), Expect(3) = 6.0 Identities = 9/42 (21%), Positives = 18/42 (42%) Frame = +2 / -3 Query: 53 IASTLKKLADSL*ISWRSSCHVLHPKCWRHASQWFLGNNGTH 178 I + L L + ++ +C ++HP+ W + G H Sbjct: 1124 IINMLPNLEYKMLVTVIRNCIIIHPQLTPQTCSWMINPRGNH 999 Score = 24.9 bits (48), Expect(3) = 6.0 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +3 / -2 Query: 681 RDRKGGGCCSG 713 ++RKG GCC G Sbjct: 144 KERKGRGCCGG 112 Score = 23.5 bits (45), Expect(3) = 6.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 / -2 Query: 307 SGELREEKSPLPNKAAAISSDPG*LPGKSSAS 402 SG E P P+ AAA ++ PG++++S Sbjct: 660 SGRSPEAVPPPPSAAAAAAARASGAPGRAASS 565
>LOC_Os05g32230:12005.t02819:unspliced-genomic expressed protein| Length = 5666 Score = 32.2 bits (64), Expect = 6.2 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 / -1 Query: 417 GHGGRWWRLWSSIFLW 464 G GG WWR W+ ++ W Sbjct: 92 GGGGWWWRAWTGVWWW 45
>LOC_Os05g05240:12005.t00414:unspliced-genomic hydrolase/ protein serine/threonine phosphatase, putative, expressed| Length = 8938 Score = 32.2 bits (64), Expect = 6.2 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 / +1 Query: 830 WCVDDHIFIC*LLLLVTVTFICYHVHLCYRFF 735 W +D+ IF *LL V+ F+CY +FF Sbjct: 7735 WAIDNFIFSH*LLWYVSSNFLCYLCKYATKFF 7830
>LOC_Os01g36560:12001.t03204:unspliced-genomic nodulin-like protein, putative, expressed| Length = 2960 Score = 32.2 bits (64), Expect = 6.2 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 / +1 Query: 788 LVTVTFICYHVHLCYRFFMPFPIKV 714 L+ V F+C+H+ L RFF+ F K+ Sbjct: 505 LLCVEFLCFHIQLFVRFFLYFSSKL 579
>LOC_Os12g43564:12012.t04025:unspliced-genomic conserved hypothetical protein| Length = 2281 Score = 32.2 bits (64), Expect = 6.2 Identities = 23/93 (24%), Positives = 34/93 (36%) Frame = +1 / -2 Query: 139 PCIPVVSRQQRDTCISVSAHRRQIRIGLAMKSWGTSCTVPPMRIRGTTRIAAVGSDSGEL 318 P +P R++R + S R R G + WGT PP A G Sbjct: 1641 PPLPSPHRRRRRRTAAASCRRPPSRSGREARIWGTLPPPPPRSTAPLPPQAHTGPPPPSS 1462 Query: 319 REEKSPLPNKAAAISSDPG*LPGKSSASNKSSL 417 R P P + + P LP ++A ++ L Sbjct: 1461 RPRPVPSPLPSPSPPPSPFPLPSAAAA*RRAPL 1363
>LOC_Os11g08980:12011.t00790:unspliced-genomic ATP binding protein, putative, expressed| Length = 9061 Score = 32.2 bits (64), Expect = 6.2 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -1 / +1 Query: 810 IYLLTSTISNCYFYLLPRSSVLSFLHALPHQ 718 ++L +SN F L SVLS LHALP Q Sbjct: 6859 LFLAMLNVSNSVFLLF*YDSVLSCLHALPFQ 6951
>LOC_Os09g28050:12009.t02483:unspliced-genomic asparate aminotransferase, putative, expressed| Length = 3981 Score = 32.2 bits (64), Expect = 6.2 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = +1 / -1 Query: 199 RRQIRIGLAMKSWGTSCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISS 366 RR R + WG + PP R G TR A+ G+ G R + L AA S Sbjct: 291 RRSRRRRWTRRPWGRAPRPPPARPSGATRRASGGARRGGRRRRRRDLTASHAASRS 124
>LOC_Os08g29550:12008.t02710:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1724 Score = 32.2 bits (64), Expect = 6.2 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +1 / +2 Query: 151 VVSRQQRDTCISVSAHRRQIRIGLAMKSWGTSC 249 +++ +Q TC+ AHRR++ + + S G++C Sbjct: 488 ILTSRQFYTCLKTRAHRRRVHHAMCLLSMGSAC 586
>LOC_Os01g13470:12001.t01209:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 5556 Score = 28.1 bits (55), Expect(2) = 6.4 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -1 / +3 Query: 522 SLNCYLCRLLHILFHC 475 SL C CRLL I FHC Sbjct: 4572 SLLCRACRLLVIQFHC 4619 Score = 26.7 bits (52), Expect(2) = 6.4 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -2 / +2 Query: 878 SKPGRASLHATIWLIIWCVDDHIFIC*LLLLVTVTFICY 762 S+ GR S + L + C D + +C L L + F+C+ Sbjct: 3293 SQGGRPSPLMGVLLDLICSDSTLLLCILTCLCSFFFLCF 3409
>LOC_Os02g29570:12002.t02650:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5897 Score = 30.9 bits (61), Expect(2) = 6.8 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -2 / +3 Query: 857 LHATIWLIIWCVDDHIFIC*LLLLVTVTFICYHVHLCYRFFMPF 726 LH +W I+ HIFIC L + F Y + R F PF Sbjct: 3930 LHPALWYKIYNF*THIFICNEFLN*MMQF*NYRLICAVRIFNPF 4061 Score = 24.0 bits (46), Expect(2) = 6.8 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -1 / +3 Query: 372 RVRTNCSRLVG*WGF 328 RV CSR+ WGF Sbjct: 4176 RVTATCSRIYAVWGF 4220
>LOC_Os03g57980:12003.t05059:unspliced-genomic lipid binding protein, putative, expressed| Length = 1528 Score = 27.2 bits (53), Expect(2) = 6.8 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -1 / +1 Query: 813 YIYLLTSTISNCYFYLLP 760 YIY+LTST+ N + +LP Sbjct: 559 YIYILTSTMLN*LYQILP 612 Score = 25.8 bits (50), Expect(2) = 6.8 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -1 / +1 Query: 1029 FFFLVRQHKINLYLYIYNY 973 FFFLV+ + Y+YIY Y Sbjct: 469 FFFLVKLLGLMKYIYIYIY 525
>LOC_Os03g08754:12003.t00732:unspliced-genomic MADS-box transcription factor 47, putative, expressed| Length = 6355 Score = 28.6 bits (56), Expect(2) = 7.2 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -1 / -2 Query: 1002 INLYLYIYNYFSCM 961 I +Y+YIY Y+SCM Sbjct: 2085 IYIYIYIYIYYSCM 2044 Score = 26.3 bits (51), Expect(2) = 7.2 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -3 / -3 Query: 742 VSSCPSPSKYPLQHPPPFLS 683 V++ PSPS P PPP +S Sbjct: 341 VAALPSPSPLPPPPPPPAIS 282
>LOC_Os09g11890:12009.t00978:unspliced-genomic expressed protein| Length = 5939 Score = 25.8 bits (50), Expect(2) = 7.3 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 / -2 Query: 711 HCSIHLLFYLF 679 H SIHLLFY F Sbjct: 3259 HSSIHLLFYFF 3227 Score = 23.1 bits (44), Expect(2) = 7.3 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = -1 / -2 Query: 852 CNNLAYHLVRR*SYIYLLTSTISNCYFYLLPRSSVLSFLHALPHQSIH 709 C+ + +V * Y LLT C L ++++ + + H SIH Sbjct: 3388 CSEKSTQVVTT*LYEPLLTGNDVLCLHQELVENNLIQEMLPINHSSIH 3245
>LOC_Os12g36500:12012.t03331:unspliced-genomic hypothetical protein| Length = 924 Score = 26.7 bits (52), Expect(2) = 7.8 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 / -1 Query: 872 PGRASLHATIWLIIWCV 822 PGR H +WLI+ C+ Sbjct: 870 PGRELRHTMVWLILLCL 820 Score = 25.4 bits (49), Expect(2) = 7.8 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 / -1 Query: 739 SSCPSPSKYPLQHPPPFLSLQ 677 SS P P++ P HPP L Q Sbjct: 285 SSSPEPTETPPPHPPQDLHCQ 223
>LOC_Os07g32920:12007.t02973:unspliced-genomic expressed protein| Length = 1799 Score = 29.0 bits (57), Expect(2) = 7.9 Identities = 17/60 (28%), Positives = 24/60 (40%) Frame = +1 / +3 Query: 232 SWGTSCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSDPG*LPGKSSASNKS 411 SW + + P +A G+ +SP P+ A+ SS P PG AS S Sbjct: 279 SWPPTTSAAPSSTTSPPAPSARGTCCSPTSASRSPPPSPTASTSSTPRTPPGAPPASRPS 458 Score = 24.0 bits (46), Expect(2) = 7.9 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +1 Query: 862 ARPGFEPIVYLYP 900 ARPG +P+V L P Sbjct: 790 ARPGLQPVVRLLP 828
>LOC_Os11g36030:12011.t03151:unspliced-genomic ubiquitin-protein ligase/ zinc ion binding protein, putative,| expressed Length = 4071 Score = 31.8 bits (63), Expect = 8.5 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 / -1 Query: 751 CAIVSSCPSPSKYPLQHPPP 692 C+ SS PSPS+ P HPPP Sbjct: 306 CSPGSSPPSPSRTPPPHPPP 247
>LOC_Os06g28820:12006.t02586:unspliced-genomic cycloartenol synthase, putative, expressed| Length = 31712 Score = 31.8 bits (63), Expect = 8.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -2 / +2 Query: 791 LLVTVTFICYHVHLCYRFFMPFPIK 717 +LVT ++ YH+ CY F + P+K Sbjct: 9473 ILVTCSYFTYHILACYSFHLICPVK 9547
>LOC_Os01g26250:12001.t02331:unspliced-genomic conserved hypothetical protein| Length = 1459 Score = 31.8 bits (63), Expect = 8.5 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +3 / +1 Query: 450 SIFLWTDESNGRECGEDGRDS 512 S++L++ + +GR CGE+GR + Sbjct: 1297 SLYLFSQDGDGRRCGEEGRQA 1359
>LOC_Os09g39160:12009.t03382:unspliced-genomic thiol protease SEN102 precursor, putative, expressed| Length = 2139 Score = 31.8 bits (63), Expect = 8.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 / +2 Query: 238 GTSCTVPPMRIRGTTRIAAVGS 303 G +CT PP R RGT+ VGS Sbjct: 86 GATCTAPPRRRRGTSPTRGVGS 151
>LOC_Os07g46870:12007.t04323:unspliced-genomic sex determination protein tasselseed-2, putative, expressed| Length = 1259 Score = 31.8 bits (63), Expect = 8.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 / +3 Query: 1020 LVRQHKINLYLYIYNYFSCMFQYSHSRNYAC 928 LV I +Y+ IY F+ F Y HS +Y C Sbjct: 87 LVYMSLIKIYITIYQEFTIYFLYYHS*SYMC 179
>LOC_Os02g50174:12002.t04600:unspliced-genomic caleosin related protein, expressed| Length = 12220 Score = 31.8 bits (63), Expect = 8.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 / -1 Query: 762 PRSSVLSFLHALPHQSIHCSIHLLFYLFNL 673 PR+ FLHA P QSI C ++ L + L Sbjct: 7081 PRALFFRFLHANPRQSISCDLNALNFCIPL 6992
>LOC_Os06g21230:12006.t01940:unspliced-genomic glycine-rich cell wall structural protein precursor, putative| Length = 604 Score = 27.2 bits (53), Expect(2) = 9.5 Identities = 6/11 (54%), Positives = 8/11 (72%) Frame = +3 / +1 Query: 432 WWRLWSSIFLW 464 WWR+W+S W Sbjct: 424 WWRIWTSCIWW 456 Score = 24.0 bits (46), Expect(2) = 9.5 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +3 / +2 Query: 684 DRKGGGCCSGYFDGEGH 734 D GGG SGY G GH Sbjct: 521 DGYGGGYGSGYGGGYGH 571
>LOC_Os03g31750:12003.t02773:unspliced-genomic pyruvate, phosphate dikinase, chloroplast precursor, putative,| expressed Length = 6985 Score = 25.4 bits (49), Expect(2) = 9.6 Identities = 7/29 (24%), Positives = 15/29 (51%) Frame = -2 / +1 Query: 842 WLIIWCVDDHIFIC*LLLLVTVTFICYHV 756 W I W +D ++ + + ++ C+HV Sbjct: 3232 WFIFWMIDHNLLLNECVTC*SIGISCFHV 3318 Score = 23.1 bits (44), Expect(2) = 9.6 Identities = 6/22 (27%), Positives = 14/22 (63%) Frame = -1 / +1 Query: 648 CIFLYLFCDGFDPEGCLLKVFI 583 C+F+ + ++PEGC + + + Sbjct: 3388 CMFICFPLNQYEPEGCCIVLLL 3453
>LOC_Os04g17860:12004.t01533:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4485 Score = 27.2 bits (53), Expect(2) = 9.6 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = -1 / -2 Query: 786 SNCYFYLLPRSSVLSFLHALPHQSIHCSIHL 694 + C+F LLP S L F+ ++ + CS ++ Sbjct: 116 ATCFFPLLPASLYLIFMRSMFSLVVSCSFNI 24 Score = 26.7 bits (52), Expect(2) = 9.6 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -1 / -1 Query: 984 IYNYFSCMFQYSHSRNYACVSRIF*HRRW 898 +Y +FSC+ Q+ H + +I RRW Sbjct: 3348 LYVFFSCLMQF*HQLSTLLSIKIQFFRRW 3262 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 433,040,382 Number of extensions: 7687844 Number of successful extensions: 41251 Number of sequences better than 10.0: 63 Length of query: 344 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 294 Effective length of database: 52,799,986 Effective search space: 15523195884 Effective search space used: 15523195884 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
